View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7729_low_15 (Length: 241)
Name: NF7729_low_15
Description: NF7729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7729_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 46503163 - 46502939
Alignment:
| Q |
1 |
ataaaagggaaggtatgttggtttatgaactcaaggaggatcaagagaggatcatcttctttttagaggtgagtttagtgggaataaagttggtttatgt |
100 |
Q |
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| T |
46503163 |
ataaaagggaaggtatgttggtttatgaactcaaggaggatcaagagaggatcatcttctttttagaggtgagtttagtgggaataaagttggtttatgt |
46503064 |
T |
|
| Q |
101 |
gagagaaagagacaaaagaaaaagtatgagataaagcagagagaattgtaacttccttacaaagaagtaagaaccaatggaaaacatagggctaaatagt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
46503063 |
gagagaaagagacaaaagaaaaagtatgagataaagcagagagaattgtaacttccttacaaagaagcaagaaccaatggaaaacatagggctaaatagt |
46502964 |
T |
|
| Q |
201 |
ctttttcatccttaaatgttaaata |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
46502963 |
ctttttcatccttaaatgttaaata |
46502939 |
T |
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