View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7730_high_11 (Length: 240)
Name: NF7730_high_11
Description: NF7730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7730_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 38931995 - 38931773
Alignment:
| Q |
1 |
ctagctgggaatccagtaaaacagagtggtagaaagcgtggtgataaagaagaagaaactaacaacatgttcagtggttttgattcacgtttcttgggac |
100 |
Q |
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| T |
38931995 |
ctagctgggaatccagtaaaacagagtggaagaaagcgtggtgataaagaagaagaaactaacaacatgttcagtggttttgattcacgtttcttgggac |
38931896 |
T |
|
| Q |
101 |
aagttttgaaagtgaaagaaagtataattagaaagcttcaatctccagatgaagaacatagaaagcaccaaattatacatgttaaaggaggtcttagtat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38931895 |
aagttttgaaagtgaaagaaagtataattagaaagcttcaatctcaagatgaacaacatagaaagcaccaaattatacatgttaaaggaggtcttagtat |
38931796 |
T |
|
| Q |
201 |
tataaggccacctttggaattgg |
223 |
Q |
| |
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||||||||||||||||||||||| |
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|
| T |
38931795 |
tataaggccacctttggaattgg |
38931773 |
T |
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