View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7730_low_14 (Length: 294)

Name: NF7730_low_14
Description: NF7730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7730_low_14
NF7730_low_14
[»] chr5 (21 HSPs)
chr5 (9-277)||(20923576-20923843)
chr5 (152-294)||(43234868-43235010)
chr5 (152-294)||(18051517-18051659)
chr5 (152-294)||(19578942-19579084)
chr5 (152-294)||(22645706-22645848)
chr5 (153-294)||(18843716-18843857)
chr5 (152-293)||(21059144-21059284)
chr5 (153-294)||(23172415-23172560)
chr5 (163-294)||(41688652-41688782)
chr5 (160-294)||(27340173-27340307)
chr5 (151-294)||(38158241-38158384)
chr5 (201-294)||(19979648-19979741)
chr5 (201-294)||(20320992-20321084)
chr5 (154-219)||(19042451-19042516)
chr5 (154-218)||(20320926-20320990)
chr5 (156-219)||(24106645-24106708)
chr5 (251-293)||(19042406-19042448)
chr5 (250-288)||(38158154-38158192)
chr5 (250-290)||(18843916-18843956)
chr5 (250-290)||(20321144-20321184)
chr5 (250-290)||(21059045-21059085)
[»] chr7 (41 HSPs)
chr7 (153-294)||(5058530-5058671)
chr7 (151-294)||(24990058-24990201)
chr7 (152-294)||(5715290-5715431)
chr7 (152-294)||(14055251-14055393)
chr7 (152-294)||(14365279-14365421)
chr7 (152-294)||(22687651-22687793)
chr7 (152-294)||(26281297-26281438)
chr7 (152-294)||(27221418-27221560)
chr7 (152-294)||(44944832-44944978)
chr7 (151-294)||(4247355-4247498)
chr7 (152-290)||(11326386-11326524)
chr7 (152-294)||(24725464-24725606)
chr7 (161-294)||(11324988-11325120)
chr7 (154-294)||(8346520-8346660)
chr7 (152-294)||(7730330-7730471)
chr7 (152-294)||(8343787-8343929)
chr7 (152-294)||(9685231-9685373)
chr7 (152-290)||(39182260-39182397)
chr7 (152-294)||(8330032-8330174)
chr7 (152-274)||(21846433-21846554)
chr7 (159-276)||(8571250-8571367)
chr7 (191-294)||(17811386-17811489)
chr7 (152-281)||(26617472-26617605)
chr7 (172-294)||(27509930-27510052)
chr7 (192-290)||(1977692-1977790)
chr7 (158-292)||(20570874-20571002)
chr7 (152-292)||(6916786-6916920)
chr7 (156-218)||(4574475-4574537)
chr7 (151-213)||(30294174-30294236)
chr7 (250-290)||(7730247-7730287)
chr7 (250-290)||(21846335-21846375)
chr7 (245-290)||(4247552-4247597)
chr7 (152-237)||(8630002-8630087)
chr7 (152-244)||(21157811-21157903)
chr7 (250-290)||(26565436-26565476)
chr7 (247-282)||(26281219-26281254)
chr7 (152-218)||(26565691-26565757)
chr7 (261-290)||(8329867-8329896)
chr7 (161-214)||(17809440-17809493)
chr7 (250-290)||(8329932-8329972)
chr7 (250-290)||(24725360-24725400)
[»] chr4 (34 HSPs)
chr4 (152-294)||(5361950-5362092)
chr4 (152-294)||(9911398-9911541)
chr4 (152-294)||(9770112-9770254)
chr4 (150-285)||(8011212-8011347)
chr4 (152-294)||(13551609-13551751)
chr4 (152-290)||(36120824-36120962)
chr4 (152-293)||(8889228-8889369)
chr4 (154-294)||(5375666-5375806)
chr4 (152-292)||(10142899-10143039)
chr4 (152-294)||(23064950-23065092)
chr4 (152-294)||(13023567-13023712)
chr4 (153-294)||(17466080-17466221)
chr4 (152-292)||(37240262-37240397)
chr4 (153-256)||(7044728-7044831)
chr4 (152-256)||(7452420-7452523)
chr4 (152-256)||(18459733-18459837)
chr4 (152-245)||(24719517-24719610)
chr4 (152-255)||(4156763-4156866)
chr4 (156-256)||(7815561-7815661)
chr4 (156-231)||(6347114-6347189)
chr4 (152-203)||(9149813-9149864)
chr4 (152-217)||(46664421-46664486)
chr4 (250-287)||(4157053-4157090)
chr4 (207-256)||(10394565-10394614)
chr4 (250-290)||(10143101-10143141)
chr4 (251-290)||(6346843-6346882)
chr4 (256-290)||(24719782-24719816)
chr4 (152-188)||(610683-610719)
chr4 (250-290)||(7044964-7045004)
chr4 (250-290)||(8011024-8011064)
chr4 (152-196)||(8744087-8744131)
chr4 (254-290)||(9911299-9911335)
chr4 (250-290)||(17466280-17466320)
chr4 (250-290)||(36121024-36121064)
[»] chr1 (33 HSPs)
chr1 (152-292)||(13276255-13276395)
chr1 (154-292)||(19009935-19010073)
chr1 (152-294)||(9955022-9955164)
chr1 (151-293)||(23528655-23528797)
chr1 (152-290)||(41032661-41032799)
chr1 (152-294)||(25146756-25146897)
chr1 (159-294)||(16125442-16125580)
chr1 (153-294)||(42180052-42180193)
chr1 (154-294)||(12513283-12513423)
chr1 (152-294)||(9327202-9327344)
chr1 (156-293)||(13100195-13100332)
chr1 (152-291)||(18304801-18304940)
chr1 (152-294)||(9352050-9352192)
chr1 (152-278)||(21846271-21846397)
chr1 (153-294)||(17869737-17869873)
chr1 (152-285)||(17055995-17056128)
chr1 (152-294)||(9128827-9128969)
chr1 (152-219)||(30619075-30619142)
chr1 (150-247)||(14074404-14074501)
chr1 (152-256)||(18337547-18337650)
chr1 (152-233)||(12800629-12800710)
chr1 (240-292)||(32881415-32881467)
chr1 (229-292)||(18228278-18228340)
chr1 (152-218)||(34478833-34478899)
chr1 (155-237)||(27917496-27917578)
chr1 (152-197)||(47785792-47785837)
chr1 (163-203)||(8772715-8772755)
chr1 (250-290)||(13100391-13100431)
chr1 (251-294)||(47785958-47786001)
chr1 (254-290)||(16125343-16125379)
chr1 (250-290)||(18304699-18304739)
chr1 (250-290)||(21846162-21846202)
chr1 (250-290)||(23528857-23528897)
[»] chr6 (35 HSPs)
chr6 (151-294)||(15528097-15528240)
chr6 (152-294)||(17250057-17250199)
chr6 (164-294)||(23897823-23897953)
chr6 (152-294)||(30912399-30912541)
chr6 (152-290)||(27233268-27233406)
chr6 (152-294)||(7223519-7223654)
chr6 (152-294)||(17543727-17543869)
chr6 (152-292)||(7918370-7918510)
chr6 (152-294)||(26053283-26053425)
chr6 (152-294)||(26073336-26073478)
chr6 (152-277)||(6943464-6943589)
chr6 (156-294)||(10509010-10509148)
chr6 (152-294)||(11327558-11327700)
chr6 (152-294)||(19748333-19748475)
chr6 (152-294)||(17103202-17103337)
chr6 (160-293)||(22498873-22499006)
chr6 (155-293)||(2912236-2912373)
chr6 (152-294)||(21354748-21354882)
chr6 (152-237)||(18491081-18491166)
chr6 (154-229)||(3573984-3574059)
chr6 (152-219)||(5422810-5422877)
chr6 (250-290)||(10508905-10508945)
chr6 (172-254)||(4841946-4842026)
chr6 (152-215)||(10958253-10958316)
chr6 (159-216)||(8545030-8545087)
chr6 (250-289)||(4841718-4841757)
chr6 (152-214)||(12245109-12245171)
chr6 (250-291)||(2912148-2912189)
chr6 (245-290)||(17103391-17103436)
chr6 (252-281)||(18490536-18490565)
chr6 (179-244)||(18490998-18491063)
chr6 (151-219)||(7359848-7359915)
chr6 (250-290)||(7918238-7918278)
chr6 (250-290)||(19748534-19748574)
chr6 (250-290)||(22498328-22498368)
[»] chr3 (46 HSPs)
chr3 (152-294)||(29067284-29067426)
chr3 (153-292)||(3449281-3449419)
chr3 (152-294)||(20756039-20756181)
chr3 (152-291)||(28745770-28745909)
chr3 (157-294)||(17064326-17064463)
chr3 (152-294)||(8156117-8156260)
chr3 (161-289)||(21963438-21963565)
chr3 (161-289)||(21985874-21986001)
chr3 (155-294)||(39427905-39428044)
chr3 (152-294)||(22356039-22356182)
chr3 (152-294)||(24620187-24620332)
chr3 (152-285)||(24649684-24649818)
chr3 (152-278)||(30727694-30727820)
chr3 (9-149)||(3181511-3181653)
chr3 (152-289)||(22137278-22137414)
chr3 (170-282)||(22494780-22494892)
chr3 (152-256)||(15806531-15806634)
chr3 (152-292)||(25870356-25870505)
chr3 (152-256)||(27676356-27676460)
chr3 (153-254)||(28135723-28135824)
chr3 (225-294)||(42696920-42696989)
chr3 (152-252)||(17796377-17796477)
chr3 (152-252)||(17796486-17796586)
chr3 (152-252)||(19104817-19104917)
chr3 (152-252)||(19104926-19105026)
chr3 (162-256)||(10872971-10873065)
chr3 (152-212)||(13005927-13005987)
chr3 (156-252)||(17796272-17796368)
chr3 (156-252)||(19104712-19104808)
chr3 (156-200)||(42696870-42696914)
chr3 (250-290)||(3449198-3449238)
chr3 (250-290)||(6136457-6136497)
chr3 (253-289)||(17796771-17796807)
chr3 (253-289)||(19105211-19105247)
chr3 (250-290)||(25870210-25870250)
chr3 (250-290)||(10872603-10872643)
chr3 (250-290)||(13286145-13286185)
chr3 (250-290)||(17064508-17064548)
chr3 (250-290)||(20756223-20756263)
chr3 (250-290)||(21963632-21963672)
chr3 (250-290)||(21986068-21986108)
chr3 (250-290)||(22137478-22137518)
chr3 (250-290)||(27676637-27676677)
chr3 (250-290)||(28745977-28746017)
chr3 (250-290)||(39428104-39428144)
chr3 (250-290)||(42697049-42697089)
[»] chr8 (32 HSPs)
chr8 (152-292)||(5922049-5922189)
chr8 (154-294)||(15294672-15294812)
chr8 (154-294)||(15475041-15475181)
chr8 (152-294)||(11879600-11879742)
chr8 (152-294)||(11897016-11897158)
chr8 (156-284)||(3094250-3094378)
chr8 (154-293)||(19704443-19704583)
chr8 (156-294)||(31424167-31424305)
chr8 (152-293)||(17646993-17647134)
chr8 (151-289)||(45403028-45403166)
chr8 (164-292)||(22910191-22910319)
chr8 (152-294)||(27836451-27836593)
chr8 (153-292)||(29384306-29384444)
chr8 (191-294)||(6810861-6810963)
chr8 (201-292)||(23142224-23142315)
chr8 (156-292)||(7489272-7489409)
chr8 (152-227)||(477101-477176)
chr8 (161-290)||(15231733-15231862)
chr8 (156-291)||(6292332-6292467)
chr8 (240-294)||(9212242-9212296)
chr8 (152-254)||(15761466-15761568)
chr8 (156-199)||(23136353-23136396)
chr8 (152-231)||(24056618-24056697)
chr8 (250-290)||(29384200-29384240)
chr8 (222-290)||(32424402-32424470)
chr8 (153-197)||(9036757-9036801)
chr8 (250-290)||(17647198-17647238)
chr8 (252-284)||(26879778-26879810)
chr8 (252-284)||(30240264-30240296)
chr8 (245-282)||(26574948-26574985)
chr8 (250-290)||(15761246-15761286)
chr8 (254-290)||(23142379-23142415)
[»] chr2 (32 HSPs)
chr2 (152-294)||(31237964-31238106)
chr2 (152-290)||(1404783-1404921)
chr2 (152-281)||(23863321-23863450)
chr2 (154-294)||(31578007-31578146)
chr2 (152-294)||(36429848-36429990)
chr2 (153-293)||(35565942-35566082)
chr2 (152-294)||(30432419-30432561)
chr2 (152-294)||(20063714-20063856)
chr2 (154-285)||(25539222-25539353)
chr2 (152-294)||(15588837-15588978)
chr2 (150-278)||(19491853-19491982)
chr2 (152-258)||(1690785-1690891)
chr2 (152-254)||(17995055-17995157)
chr2 (152-251)||(16766710-16766809)
chr2 (191-254)||(31023262-31023325)
chr2 (241-294)||(1690715-1690768)
chr2 (152-257)||(15266082-15266187)
chr2 (250-290)||(13502561-13502601)
chr2 (153-216)||(15516624-15516687)
chr2 (152-203)||(19245153-19245204)
chr2 (251-290)||(27406993-27407032)
chr2 (152-255)||(5395674-5395777)
chr2 (162-256)||(13503067-13503162)
chr2 (180-255)||(34841584-34841659)
chr2 (156-186)||(15627659-15627689)
chr2 (261-290)||(16766997-16767026)
chr2 (250-290)||(15588742-15588782)
chr2 (252-284)||(19519577-19519609)
chr2 (152-216)||(24473336-24473400)
chr2 (250-290)||(30433016-30433056)
chr2 (252-284)||(34841784-34841816)
chr2 (250-290)||(35565845-35565885)
[»] scaffold0417 (1 HSPs)
scaffold0417 (152-293)||(7443-7584)
[»] scaffold0186 (2 HSPs)
scaffold0186 (152-294)||(8443-8585)
scaffold0186 (250-290)||(8642-8682)
[»] scaffold0042 (2 HSPs)
scaffold0042 (152-292)||(93695-93833)
scaffold0042 (250-290)||(93593-93633)
[»] scaffold0510 (1 HSPs)
scaffold0510 (164-290)||(91-218)
[»] scaffold0036 (1 HSPs)
scaffold0036 (152-256)||(37191-37295)
[»] scaffold0048 (1 HSPs)
scaffold0048 (152-230)||(48839-48917)
[»] scaffold0115 (1 HSPs)
scaffold0115 (152-237)||(35103-35188)
[»] scaffold0603 (2 HSPs)
scaffold0603 (152-252)||(9049-9149)
scaffold0603 (250-290)||(8847-8887)
[»] scaffold0016 (1 HSPs)
scaffold0016 (250-290)||(56313-56353)


Alignment Details
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 9 - 277
Target Start/End: Original strand, 20923576 - 20923843
Alignment:
Q  9 tggacatcatgactccgatgctaaataaatgatcccttttttcctttgcctggtatctcaatgaccttgtgtagatactagcaaatgtagnnnnnnnnnn 108  Q
    |||| |||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||              
T  20923576 tggaaatcatgactcagatgctaaatgaatgatccctttttttctttgcctggtatctcaatgaccttgtgtagatactagcaaatgtagttttttttt- 20923674  T
Q  109 cttcttatcagtaatgttagtttcttgcactttttagggtttaattgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttca 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20923675 cttcttatcagtaatgttagtttcttgcactttttagggtttaattgttgtcaaaatcccgacttaaatcctaaaatccagaattttgcgactttcttca 20923774  T
Q  209 ccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatcaattttgattgcgatttt 277  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||    
T  20923775 ccttcaacgacctaaatccatagtagaatcctaaaataggcaaagtccatcgattttgattgcgatttt 20923843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 43234868 - 43235010
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||    
T  43234868 attgttgtcaaaatcccaacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcctaaaataggaaa 43234967  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| |||||||||| |||||||||||||||||| ||||    
T  43234968 aatccatcgattttgattgtgattttacgatttcttatcaact 43235010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 18051659 - 18051517
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||||||||||||||||||||  || |||||||||||||||||| ||||||||||  ||||| ||||||||||||||||||||||||    
T  18051659 attgttgtcaaaatcccgacttaaatcctaaaatataggattttgcgactttcttcaacttcaacgactcaaatctatagtagaattctaaaataggcaa 18051560  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  18051559 aatccatcgattttgattgcgattgtacgatttcttataaact 18051517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 19578942 - 19579084
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||| || ||||||||| |||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||||| | |||||| ||||    
T  19578942 attgttgtcaaaattccaacttaaatcataaaatccaggattttgcgattttcttcaccttcaacgacttaaatccatagtagaatcccaaaataagcaa 19579041  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| ||||||||||||| ||||||||||||||||||||    
T  19579042 aatccatcgattttgattgcgactttacgatttcttataaact 19579084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 22645848 - 22645706
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||||||||| ||| | |||||| | ||    
T  22645848 attgttgtcaaaatcccgacttaaatcctaaaatccagtattttgcgactttcttcaccttcaacgatttaaatccatagtaaaatcccaaaataagtaa 22645749  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    | |||||| ||||||||||||||||||| ||||||||||||||    
T  22645748 attccatctattttgattgcgattttacaatttcttataaact 22645706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 18843716 - 18843857
Alignment:
Q  153 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaa 252  Q
    ||||||| ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||  |||||||| ||||||| | ||||||| ||||    
T  18843716 ttgttgttaaaattccgacttaaatcctataattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaatcccaaaatagacaaa 18843815  T
Q  253 atccatcaattttgattgcgattttacgatttcttataaact 294  Q
    || |||| ||||||||||| ||| ||||||||||||||||||    
T  18843816 attcatcgattttgattgcaattatacgatttcttataaact 18843857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 152 - 293
Target Start/End: Complemental strand, 21059284 - 21059144
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||||| ||||||||||||||  || ||||||||||||||||||| |||||||||  |||||||| ||||||| |  ||||||||||    
T  21059284 attgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcactttcaacgactcaaatccat-gtagaatccctaaataggcaa 21059186  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaac 293  Q
    ||| |||| |||||||||||||||||||||||||||||||||    
T  21059185 aattcatcgattttgattgcgattttacgatttcttataaac 21059144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 153 - 294
Target Start/End: Complemental strand, 23172560 - 23172415
Alignment:
Q  153 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaa 252  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||||| | ||||||| ||||    
T  23172560 ttgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcatcttcaacgacttaaatccatagtagaatcccaaaatagacaaa 23172461  T
Q  253 ----atccatcaattttgattgcgattttacgatttcttataaact 294  Q
        ||| ||| |||||||| ||||||||||||||| |||||||||    
T  23172460 attcatcgatcgattttgatcgcgattttacgattttttataaact 23172415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 163 - 294
Target Start/End: Complemental strand, 41688782 - 41688652
Alignment:
Q  163 aatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatcaat 262  Q
    |||||| |||||||||||||||||| || |||||| | ||||||||||||||||||| |||||  |||||| |||||||||||| ||||||| |||| ||    
T  41688782 aatcccaacttaaatcctaaaattcgga-ttttgcaattttcttcaccttcaacgacttaaatttatagtaaaattctaaaataagcaaaattcatcgat 41688684  T
Q  263 tttgattgcgattttacgatttcttataaact 294  Q
    ||||||||||||||||||||||||||||||||    
T  41688683 tttgattgcgattttacgatttcttataaact 41688652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 27340307 - 27340173
Alignment:
Q  160 caaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatc 259  Q
    ||||||||||||||||||| ||||||| |  |||||||||||||||||| ||||||||||  ||||| ||||||||||  ||||||||||||||| ||||    
T  27340307 caaaatcccgacttaaatcataaaatttatgattttgcgactttcttcatcttcaacgactcaaatctatagtagaatcttaaaataggcaaaattcatc 27340208  T
Q  260 aattttgattgcgattttacgatttcttataaact 294  Q
     |||||||||| |||||||  ||||||||||||||    
T  27340207 gattttgattgagattttaatatttcttataaact 27340173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 151 - 294
Target Start/End: Complemental strand, 38158384 - 38158241
Alignment:
Q  151 aattgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggca 250  Q
    ||||||||||||||| |||||||||||||||||||  || |||||||||||||||| || |||||| ||  ||||||| |||||||| | ||||||| ||    
T  38158384 aattgttgtcaaaattccgacttaaatcctaaaatctaggattttgcgactttcttgactttcaacaactcaaatccagagtagaatcccaaaatagaca 38158285  T
Q  251 aaatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||||||||  |||||| |||  ||||||||||||||||||||||    
T  38158284 aaatccattgattttggttgttattttacgatttcttataaact 38158241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 294
Target Start/End: Original strand, 19979648 - 19979741
Alignment:
Q  201 tttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| ||||||||||  |||| ||| ||||||| | |||| | |||||||||||  ||||||||||||||||||||||||||||||||||    
T  19979648 tttcttcatcttcaacgactcaaattcatggtagaatcccaaaacacgcaaaatccatggattttgattgcgattttacgatttcttataaact 19979741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 294
Target Start/End: Original strand, 20320992 - 20321084
Alignment:
Q  201 tttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||||||||||||||| |||  |||||||||||| ||||| |||||||  ||||| |||||| ||||||||||||||||||| ||||||||||||    
T  20320992 tttcttcaccttcaatgactaaaatccatagtaaaattccaaaatagataaaattcatcaactttgattgcgattttacga-ttcttataaact 20321084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 19042516 - 19042451
Alignment:
Q  154 tgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgac 219  Q
    ||||||||||||||| |||||||| |||||||| |  |||||| ||||||||||||||||||||||    
T  19042516 tgttgtcaaaatcccaacttaaattctaaaatttaagattttgtgactttcttcaccttcaacgac 19042451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 20320926 - 20320990
Alignment:
Q  154 tgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacga 218  Q
    ||||||||||||||| || |||||||||||||| |  ||||||| ||||||||||||||||||||    
T  20320926 tgttgtcaaaatcccaacctaaatcctaaaatttaagattttgcaactttcttcaccttcaacga 20320990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 24106645 - 24106708
Alignment:
Q  156 ttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgac 219  Q
    |||||||||||| || ||||||| |||||||||| ||||||| ||||||||||||  |||||||    
T  24106645 ttgtcaaaatcctgatttaaatcataaaattcaggattttgcaactttcttcaccagcaacgac 24106708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 19042448 - 19042406
Alignment:
Q  251 aaatccatcaattttgattgcgattttacgatttcttataaac 293  Q
    ||||| ||| |||||||||||||||||||||||||||||||||    
T  19042448 aaatctatcgattttgattgcgattttacgatttcttataaac 19042406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 288
Target Start/End: Complemental strand, 38158192 - 38158154
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttctta 288  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  38158192 aaaatccatcaattttgattgtgattttacaatttctta 38158154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 18843916 - 18843956
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  18843916 aaaatccatcgattttgattgcgattttacaatttcctata 18843956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 20321144 - 20321184
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  20321144 aaaatccatcgattttgattgcgattttacaatttcctata 20321184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 21059085 - 21059045
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||  ||||||||||    
T  21059085 aaaatccatcgattttgattgcgattttataatttcttata 21059045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 3e-60; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 5058530 - 5058671
Alignment:
Q  153 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaa 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  5058530 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgattttcttcaccttcaacgacctaaatccatagtagaatcttaaaataggcaaa 5058629  T
Q  253 atccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||||  | ||||||||||||||||||||||||||||||||||    
T  5058630 atcctacgattttgattgcgattttacgatttcttataaact 5058671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 151 - 294
Target Start/End: Complemental strand, 24990201 - 24990058
Alignment:
Q  151 aattgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggca 250  Q
    ||||||||||||||| ||||||||||||| |||||| || |||||| ||||||||| |||| |||||||  |||||||||||||||| ||||||||||||    
T  24990201 aattgttgtcaaaattccgacttaaatccaaaaatttaggattttgtgactttctttacctccaacgactcaaatccatagtagaatcctaaaataggca 24990102  T
Q  251 aaatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||    
T  24990101 aaatccatcgattttgattgcaattttacgatttcttataaact 24990058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 5715290 - 5715431
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||| || ||||| ||||||||||||| |||||| ||||    
T  5715290 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgacttt-tacaccttcaacaacttaaattcatagtagaattccaaaataagcaa 5715388  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||| |||| |||||||||| |||||||||||||||||||||||    
T  5715389 aattcatcgattttgattgtgattttacgatttcttataaact 5715431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 14055251 - 14055393
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||| |||||||| ||||| |||||||||| ||  |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  14055251 attgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggcaa 14055350  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||  ||||||||||||||||||||| ||||||||||||    
T  14055351 aatccatagattttgattgcgattttacgacttcttataaact 14055393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 14365279 - 14365421
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||| |||||||| ||||| |||||||||| ||  |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  14365279 attgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggcaa 14365378  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||  ||||||||||||||||||||| ||||||||||||    
T  14365379 aatccatagattttgattgcgattttacgacttcttataaact 14365421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 22687793 - 22687651
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||| ||  |||||||| | ||||| | |||||||||||    
T  22687793 attgttgtcaaaatcccgacttaaatcctaaaattcaggaatttgcgactttcttcaacttcaacaactcaaatccatcgcagaatcccaaaataggcaa 22687694  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| |||||||||||||||||||||||||||| |||||    
T  22687693 aatccatcgattttgattgcgattttacgatttcttacaaact 22687651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 26281438 - 26281297
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||  |||||||| ||||||||| |||||| ||||    
T  26281438 attgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaattccaaaataagcaa 26281339  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| |||||| ||||||||| |||||||||||||||||    
T  26281338 aatccatcgattttg-ttgcgatttaacgatttcttataaact 26281297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 27221418 - 27221560
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||| ||||||||||  |||| |||||||||||  |||||| |||||    
T  27221418 attgttgttaaaatcccaacttaaattctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatacatagtagaatcttaaaattggcaa 27221517  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  27221518 aatccatcgattttgattgcgattttacgatttcttataaact 27221560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 44944978 - 44944832
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcac----cttcaacgacctaaatccatagtagaattctaaaatag 247  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    |||||||||   |||||||||||||||| |||||||||    
T  44944978 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcactcaccttcaacgattcaaatccatagtagaatcctaaaatag 44944879  T
Q  248 gcaaaatccatcaattttgattgcgattttacgatttcttataaact 294  Q
     ||||||||||| |||||||||| |||||||| ||||||||||||||    
T  44944878 tcaaaatccatcgattttgattgggattttactatttcttataaact 44944832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 151 - 294
Target Start/End: Original strand, 4247355 - 4247498
Alignment:
Q  151 aattgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggca 250  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||  ||||||||||| |||||| || ||||||||||||||||| | ||||||||||    
T  4247355 aattgttgtcaaaatcccaatttaaatcctaaaattcaggattttgtaactttcttcactttcaacaacttaaatccatagtagaatcccaaaataggca 4247454  T
Q  251 aaatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||| |||| |||||||||||||||||| |||||||||||||||    
T  4247455 aaattcatcgattttgattgcgattttatgatttcttataaact 4247498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 152 - 290
Target Start/End: Original strand, 11326386 - 11326524
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||| ||||  ||||||||||||||||  ||||||||||||    
T  11326386 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcagcgactaaaatccatagtagaatcttaaaataggcaa 11326485  T
Q  252 aatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||| ||| ||||||||||||||||||| ||||| ||||    
T  11326486 aatctatcgattttgattgcgattttacaatttcctata 11326524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 24725606 - 24725464
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||| ||||||||||||||||| ||  ||||| |||||||||||||||||||| ||  ||||||||||||||||   |||||||||||    
T  24725606 attgttgtcaaaatccagacttaaatcctaaaatccaagattttacgactttcttcaccttcaacaactcaaatccatagtagaatcgcaaaataggcaa 24725507  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  24725506 aatccatcaattttgattacgatttgacgatttcttataaact 24725464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 161 - 294
Target Start/End: Original strand, 11324988 - 11325120
Alignment:
Q  161 aaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatca 260  Q
    ||||||||||||||||||||||||||||  |||||| || |||||||||||||||||||  ||||||||| ||||||||||||||||||||||| ||| |    
T  11324988 aaaatcccgacttaaatcctaaaattcatgattttgggattttcttcaccttcaacgactcaaatccataatagaattctaaaataggcaaaattcat-a 11325086  T
Q  261 attttgattgcgattttacgatttcttataaact 294  Q
    ||||||||||||| ||||||||||||||||||||    
T  11325087 attttgattgcgaatttacgatttcttataaact 11325120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 8346660 - 8346520
Alignment:
Q  154 tgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaa 253  Q
    |||||||||||||| ||| |||||  ||||||| || |||||||||||||||||||||||||||||  |||||||||||||||| | |||||||| ||||    
T  8346660 tgttgtcaaaatcctgacctaaatattaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataggaaaaa 8346561  T
Q  254 tccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||| ||||| ||||||||||||||||||||||||||||    
T  8346560 tccatcgattttaattgcgattttacgatttcttataaact 8346520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 7730471 - 7730330
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||| ||||||||||||||||| |||  ||||||||||||||||||||| ||| ||  ||||||| |||||||||| |||||||| ||    
T  7730471 attgttgtcaaaatcctgacttaaatcctaaaatccagg-ttttgcgactttcttcacctttaacaactcaaatccacagtagaattccaaaataggaaa 7730373  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| |||||||||| |||||||||||||||||||||||    
T  7730372 aatccatcgattttgattgagattttacgatttcttataaact 7730330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 8343929 - 8343787
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||  | | ||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||| | |||||| | ||    
T  8343929 attgttgtcaaaatcttggcctaaatcctaaaatcctggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatatgaaa 8343830  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  8343829 aatccatcaattttaattgcgattttacgatttcttataaact 8343787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 9685373 - 9685231
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||| ||||||| ||||||||||| || ||||||||||||| |||||||||||||||  ||||||||| |||||||  ||||||| |||    
T  9685373 attgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagacaa 9685274  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| ||||| |||||||||||| |||||||||||||||    
T  9685273 aatccatcgattttaattgcgattttatgatttcttataaact 9685231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 152 - 290
Target Start/End: Original strand, 39182260 - 39182397
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||| |||||||| |||||||||||||||||  || |||||||||||| ||||||||||||||||  |||||||||||||||| | |||||||||||    
T  39182260 attgttgacaaaatcctgacttaaatcctaaaatctaggattttgcgactt-cttcaccttcaacgactgaaatccatagtagaatcccaaaataggcaa 39182358  T
Q  252 aatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||| |||||| |||||||||||| ||||||||||    
T  39182359 aatccatcgattttggttgcgattttacaatttcttata 39182397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 8330174 - 8330032
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||| ||| ||||| ||||||||||  ||||||||||||||||||||||||||||   |||||||||||||||| | |||||||| ||    
T  8330174 attgttgtcaaaatcctgacctaaattctaaaattcatgattttgcgactttcttcaccttcaacgattcaaatccatagtagaatcccaaaataggaaa 8330075  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||| |||  ||||| |||||||||||||||||| |||||||||    
T  8330074 aattcattgattttaattgcgattttacgattttttataaact 8330032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 274
Target Start/End: Complemental strand, 21846554 - 21846433
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||| |||||||||  | ||||||||||||||||||||| ||| ||    
T  21846554 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttt-ttcacattcaacgactcacatccatagtagaattctaaaacaggtaa 21846456  T
Q  252 aatccatcaattttgattgcgat 274  Q
    |||| ||| ||||||||||||||    
T  21846455 aatcaatcgattttgattgcgat 21846433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 159 - 276
Target Start/End: Original strand, 8571250 - 8571367
Alignment:
Q  159 tcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccat 258  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||||| ||||||  |||||||||||||||| |||||||||  |||| ||||    
T  8571250 tcaaaatcccgacttaaatcataaaatccaggattttgcgactttcttcacctttaacgactcaaatccatagtagaatcctaaaatagagaaaaaccat 8571349  T
Q  259 caattttgattgcgattt 276  Q
    | ||||||||||||||||    
T  8571350 cgattttgattgcgattt 8571367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 191 - 294
Target Start/End: Original strand, 17811386 - 17811489
Alignment:
Q  191 attttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||| |||||| |||||||||||||||  ||||||||||||||||| |||||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  17811386 attttgtgacttttttcaccttcaacgactcaaatccatagtagaattttaaaatagacaaaatcgatcgattttgattgcgattttacgatttcttata 17811485  T
Q  291 aact 294  Q
    ||||    
T  17811486 aact 17811489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 281
Target Start/End: Complemental strand, 26617605 - 26617472
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatcc--atagtagaattctaaa--atag 247  Q
    |||||| | ||||| | ||||| ||||||||||||||| ||||||||||||| ||||||||||||||| ||||| |  ||||||||||||||||  ||||    
T  26617605 attgttttgaaaattctgactttaatcctaaaattcaggattttgcgacttttttcaccttcaacgacataaattcatatagtagaattctaaaatatag 26617506  T
Q  248 gcaaaatccatcaattttgattgcgattttacga 281  Q
    |||||||| ||| |||||||||||||||||||||    
T  26617505 gcaaaatctatcgattttgattgcgattttacga 26617472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 27510052 - 27509930
Alignment:
Q  172 ttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatcaattttgattgc 271  Q
    |||||| |||||||  || ||||||||| ||||||||| | ||||||   ||||| |||||||||||  |||||||||||||| ||||||||||||||||    
T  27510052 ttaaattctaaaataaaggattttgcgattttcttcacatccaacgattcaaatctatagtagaatttaaaaataggcaaaattcatcaattttgattgc 27509953  T
Q  272 gattttacgatttcttataaact 294  Q
    |||||||||||||||||||||||    
T  27509952 gattttacgatttcttataaact 27509930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 192 - 290
Target Start/End: Original strand, 1977692 - 1977790
Alignment:
Q  192 ttttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||| ||| | |||||||||||||  |||||||||||||||| |||||||| ||||||| | || |||||||||||||||||| |||||||||||    
T  1977692 ttttgcgattttttccaccttcaacgactcaaatccatagtagaatcctaaaatatgcaaaattcgtcgattttgattgcgattttaggatttcttata 1977790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 292
Target Start/End: Complemental strand, 20571002 - 20570874
Alignment:
Q  158 gtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatcca 257  Q
    |||||| ||||||||||||| || |||| ||  |||||| ||||||||||| ||      ||||||||| ||||||||||   ||||||| |||||||||    
T  20571002 gtcaaactcccgacttaaattctgaaatccaagattttgtgactttcttcatct------acctaaatctatagtagaatctaaaaatagacaaaatcca 20570909  T
Q  258 tcaattttgattgcgattttacgatttcttataaa 292  Q
    || ||||||||||| ||||||||||||||||||||    
T  20570908 tcgattttgattgcaattttacgatttcttataaa 20570874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 292
Target Start/End: Original strand, 6916786 - 6916920
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttctt-caccttcaacgacctaaatccatagtagaattctaaaataggca 250  Q
    ||||||||||||||||||| ||||||| | ||||| || ||||||||| ||| || |||||     |||  |||| ||||||||||||||||||  |  |    
T  6916786 attgttgtcaaaatcccgatttaaatcttgaaatttaggattttgcgattttttttcacct-----gactcaaattcatagtagaattctaaaa--gtta 6916878  T
Q  251 aaatccatcaattttgattgcgattttacgatttcttataaa 292  Q
    |||||||||  |||||||||||||||||||||||||||||||    
T  6916879 aaatccatcggttttgattgcgattttacgatttcttataaa 6916920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 4574475 - 4574537
Alignment:
Q  156 ttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacga 218  Q
    |||| ||||||  ||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  4574475 ttgtgaaaatcatgacttaaatcctaaaatccagaattttgcgactttactcaccttcaacga 4574537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 30294174 - 30294236
Alignment:
Q  151 aattgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttc 213  Q
    |||||||||||||||||| |||||||||||||||| ||| |||||| || ||| |||||||||    
T  30294174 aattgttgtcaaaatcccaacttaaatcctaaaatccaggattttgtgattttattcaccttc 30294236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 7730287 - 7730247
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  7730287 aaaatccatcaattttgattgcgattttacaatttcttata 7730247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 21846375 - 21846335
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  21846375 aaaatccatcaattttgattgtgattttacgatttcttata 21846335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 4247552 - 4247597
Alignment:
Q  245 taggcaaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||| |||||||||| |||||||||||||||||| |||||||||||    
T  4247552 taggtaaaatccatcgattttgattgcgattttatgatttcttata 4247597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 8630087 - 8630002
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaat 237  Q
    ||||||||||||||| |||||||| ||| |||||  || ||||||| |||||  | | ||||||||||  ||||||||||||||||    
T  8630087 attgttgtcaaaatcgcgacttaagtcccaaaatctaggattttgcaactttacttaacttcaacgactcaaatccatagtagaat 8630002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 21157903 - 21157811
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaa 244  Q
    ||||||||| |||| | |||||||||| ||||||||||  ||||||||||||  |||| | |||||||  |||||||||| | ||| ||||||    
T  21157903 attgttgtcgaaattctgacttaaatcttaaaattcagggttttgcgactttactcacttacaacgactcaaatccatagcaaaatcctaaaa 21157811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 26565476 - 26565436
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  26565476 aaaatccatcaattttgattgcaattttacgattttttata 26565436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 247 - 282
Target Start/End: Complemental strand, 26281254 - 26281219
Alignment:
Q  247 ggcaaaatccatcaattttgattgcgattttacgat 282  Q
    |||||||||| |||||||||||||||||||||||||    
T  26281254 ggcaaaatccttcaattttgattgcgattttacgat 26281219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 26565757 - 26565691
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacga 218  Q
    |||||||||||||| | | |||||||| |||||||||||||||||  ||||| ||||| || |||||    
T  26565757 attgttgtcaaaattctgccttaaatcataaaattcagaattttgtaactttattcacttttaacga 26565691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 290
Target Start/End: Complemental strand, 8329896 - 8329867
Alignment:
Q  261 attttgattgcgattttacgatttcttata 290  Q
    ||||||||||||||||||||||||||||||    
T  8329896 attttgattgcgattttacgatttcttata 8329867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 17809493 - 17809440
Alignment:
Q  161 aaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttca 214  Q
    |||||| |||||||||||| ||||||||| |||||| ||||||  |||||||||    
T  17809493 aaaatcgcgacttaaatcccaaaattcaggattttgtgactttactcaccttca 17809440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 8329972 - 8329932
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||  ||||||||||| ||||||||||||||||||    
T  8329972 aaaatccattgattttgattgcaattttacgatttcttata 8329932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 24725400 - 24725360
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  24725400 aaaatccatcgattttgattgcgattttacaatttcctata 24725360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 5e-56; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 5362092 - 5361950
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||||||    
T  5362092 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaattccaaaataggcaa 5361993  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    || ||||| |||||||||| |||||||||||||||||||||||    
T  5361992 aacccatcgattttgattgagattttacgatttcttataaact 5361950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 9911541 - 9911398
Alignment:
Q  152 attgttgtcaaaatcccgacttaaa-tcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggca 250  Q
    ||||||||| ||||||||| ||||| ||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  9911541 attgttgtctaaatcccgatttaaaatcctaaaattcaagattttgcaactttcttcaccttcaacggcctaaatccatagtagaatcctaaaattggca 9911442  T
Q  251 aaatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  9911441 aaatccatcgattttgattgcgattttacgatttcttataaact 9911398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 9770112 - 9770254
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||| |||||| |||||||||| |||||||  || |||||| |||||| |||||||||||||||  |||||||||||||||| ||||||||| |||    
T  9770112 attgttgttaaaatctcgacttaaattctaaaatctaggattttgtgacttttttcaccttcaacgactcaaatccatagtagaatcctaaaatagacaa 9770211  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  9770212 aatctatcaattttgattgcgattttacgatttcttataaact 9770254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 150 - 285
Target Start/End: Complemental strand, 8011347 - 8011212
Alignment:
Q  150 taattgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggc 249  Q
    ||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||| | |||||  ||    
T  8011347 taattgttgtcaaaatcccaactcaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatgagc 8011248  T
Q  250 aaaatccatcaattttgattgcgattttacgatttc 285  Q
    ||||| |||| ||||||||||||||||| |||||||    
T  8011247 aaaattcatcgattttgattgcgattttgcgatttc 8011212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 13551751 - 13551609
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||| ||||||| ||||||||||| || ||||||||||||| |||||||||||||||  ||||||||| |||||||  ||||||| |||    
T  13551751 attgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagacaa 13551652  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| ||||| |||||||||||| |||||||||||||||    
T  13551651 aatccatcgattttaattgcgattttatgatttcttataaact 13551609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 152 - 290
Target Start/End: Original strand, 36120824 - 36120962
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||| |||| ||||||  ||||||| || ||||||||| ||||||||||||||||||| |||||||||| || |||||||||||| ||||    
T  36120824 attgttgtcaaaattccgatttaaattttaaaatttaggattttgcgattttcttcaccttcaacgacttaaatccataataaaattctaaaataagcaa 36120923  T
Q  252 aatccatcaattttgattgcgattttacgatttcttata 290  Q
    ||| |||| ||||||||||||||||||||||||||||||    
T  36120924 aattcatcgattttgattgcgattttacgatttcttata 36120962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 152 - 293
Target Start/End: Original strand, 8889228 - 8889369
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||| || |||||||||| ||||||||  |||| |||| |||||| | |||||||||||    
T  8889228 attgatgtcaaaatcccgacttaaatcctaaaatccaggattttgtgaatttcttcaccatcaacgactcaaattcataatagaatcccaaaataggcaa 8889327  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaac 293  Q
    ||| |||| |||||||||||||||||||||||||||||||||    
T  8889328 aattcatcgattttgattgcgattttacgatttcttataaac 8889369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 5375666 - 5375806
Alignment:
Q  154 tgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaa 253  Q
    ||||||||||||||| || ||||| |||||||| |  |||||||||||||||||||||||||||||  |||| |||| ||||||| |||||||| |||||    
T  5375666 tgttgtcaaaatcccaacctaaattctaaaatttaagattttgcgactttcttcaccttcaacgactaaaattcataatagaattttaaaatagacaaaa 5375765  T
Q  254 tccatcaattttgattgcgattttacgatttcttataaact 294  Q
    | |||| | ||||||||||||||||||||||||||||||||    
T  5375766 ttcatcgactttgattgcgattttacgatttcttataaact 5375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 152 - 292
Target Start/End: Original strand, 10142899 - 10143039
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||| ||||||||||||||||| |||||||| |  ||||||||||||||| ||||||||| |||  || ||||||||| ||||| ||||||| |||    
T  10142899 attgttgtgaaaatcccgacttaaattctaaaatttaatattttgcgactttctccaccttcaatgactcaagtccatagtataattccaaaatagacaa 10142998  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaa 292  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  10142999 aatccatcgattttgattgtgattttacgatttcttataaa 10143039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 23065092 - 23064950
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||| |||| |||||||||||| ||||||| ||| ||||||  ||||||||||| |||||||||  |||||||| ||||||||||||||||||  |    
T  23065092 attgttgttaaaaccccgacttaaattctaaaatccagtattttgtaactttcttcacattcaacgactcaaatccattgtagaattctaaaataggtca 23064993  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||    
T  23064992 aatccatcgattttaattgcaattttacgatttcttataaact 23064950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 13023567 - 13023712
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaa-ttcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattc--taaaatagg 248  Q
    ||||||||||||||||| ||||||||||||||| || || ||||||||||||||||||||||||| |||  |||||||||||||||| |   |||||||     
T  13023567 attgttgtcaaaatcccaacttaaatcctaaaaatttaggattttgcgactttcttcaccttcaatgactcaaatccatagtagaatcccaaaaaataga 13023666  T
Q  249 caaaatccatcaattttgattgcgattttacgatttcttataaact 294  Q
     |||||| ||| |||||||||||||||||||||||| |||||||||    
T  13023667 taaaatcaatcgattttgattgcgattttacgattttttataaact 13023712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 17466080 - 17466221
Alignment:
Q  153 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaa 252  Q
    ||||||||||||| || ||||||||| ||||||| || ||||||||| |||||||| ||| || |||  ||||||||| |||||| |||||||| |||||    
T  17466080 ttgttgtcaaaattccaacttaaatcttaaaatttaggattttgcgattttcttcatctttaaggactcaaatccataatagaatcctaaaataagcaaa 17466179  T
Q  253 atccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||||||| |||| ||||||||||||||||||||| |||||||    
T  17466180 atccatcgatttagattgcgattttacgatttctaataaact 17466221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 292
Target Start/End: Original strand, 37240262 - 37240397
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||| |||||||| ||||||||||||||||| ||    || ||||||| |||||||||||||||  |||||||||||||||  | ||||||||||     
T  37240262 attgttgttaaaatccctacttaaatcctaaaatttag----ttacgacttttttcaccttcaacgactcaaatccatagtagaaccc-aaaataggcat 37240356  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaa 292  Q
    ||| |||| ||||||||||||||||||||||||||||||||    
T  37240357 aattcatcgattttgattgcgattttacgatttcttataaa 37240397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 256
Target Start/End: Original strand, 7044728 - 7044831
Alignment:
Q  153 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaa 252  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||| ||||| |||||||||||||||  |||||||||| ||||| | |||||| |||||    
T  7044728 ttgttgtcaaaatcccgacttaaatcctaaaatccatgattttgcaactttattcaccttcaacgactcaaatccatagcagaatcccaaaataagcaaa 7044827  T
Q  253 atcc 256  Q
    ||||    
T  7044828 atcc 7044831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 7452420 - 7452523
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||||||| || |||||||||| || | |||| ||||||||    
T  7452420 attgttgtgaaaatcccgacttaaattctaaaatccagaattttgcaactttattcaccttcaacga-ctcaatccatagtggattcctaatataggcaa 7452518  T
Q  252 aatcc 256  Q
    |||||    
T  7452519 aatcc 7452523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 152 - 256
Target Start/End: Complemental strand, 18459837 - 18459733
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||| |||||||||||| |||||||||||| ||  ||||||||||| | ||||| |||||||||  |||||||||| ||||| |||||||||||||    
T  18459837 attgttgtaaaaatcccgactaaaatcctaaaatccaagattttgcgactgtattcactttcaacgactcaaatccatagcagaatcctaaaataggcaa 18459738  T
Q  252 aatcc 256  Q
    |||||    
T  18459737 aatcc 18459733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 24719517 - 24719610
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaat 245  Q
    ||||||||||||||| |||||||| | ||||||||||  ||||||||||||| |||||||||||||||  |||||||||| ||||| |||||||    
T  24719517 attgttgtcaaaatctcgacttaatttctaaaattcaagattttgcgactttattcaccttcaacgactcaaatccatagcagaatcctaaaat 24719610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 255
Target Start/End: Original strand, 4156763 - 4156866
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||||||||||||| ||||||| || |||||  |||||| |||||||| ||||||  |||||  ||||||||| |||||||| ||||    
T  4156763 attgttgtcaaaatcccgacttaaatcttaaaatttaggattttatgactttattcacctttaacgactcaaatctgtagtagaatcctaaaataagcaa 4156862  T
Q  252 aatc 255  Q
    ||||    
T  4156863 aatc 4156866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 7815561 - 7815661
Alignment:
Q  156 ttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatc 255  Q
    |||| ||||||||||||||||||||||||| ||| |||||| |||||| |||| ||| | ||||  ||| |||||||||||| | |||||||||||||||    
T  7815561 ttgttaaaatcccgacttaaatcctaaaatacagcattttgtgactttattcagcttaagcgactcaaacccatagtagaatcccaaaataggcaaaatc 7815660  T
Q  256 c 256  Q
    |    
T  7815661 c 7815661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 6347189 - 6347114
Alignment:
Q  156 ttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatag 231  Q
    |||||||||| || |||||||||||||||| ||| ||||||| ||||| || ||||||||||||  ||||||||||    
T  6347189 ttgtcaaaattccaacttaaatcctaaaatccaggattttgcaactttatttaccttcaacgactcaaatccatag 6347114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 9149864 - 9149813
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgacttt 203  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||||||    
T  9149864 attgtggtcaaaatcccgacttaaatcctaaaatttaggattttgcgacttt 9149813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 46664486 - 46664421
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacg 217  Q
    |||| |||||||||  | ||||||||| |||||||||||||||||||||||| |||| ||||||||    
T  46664486 attgctgtcaaaatttcaacttaaatcttaaaattcagaattttgcgactttgttcatcttcaacg 46664421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 287
Target Start/End: Original strand, 4157053 - 4157090
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttctt 287  Q
    |||||||||| |||||||||||||||||||||||||||    
T  4157053 aaaatccatcgattttgattgcgattttacgatttctt 4157090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 10394565 - 10394614
Alignment:
Q  207 caccttcaacgacctaaatccatagtagaattctaaaataggcaaaatcc 256  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||| ||||    
T  10394565 caccttcaacgacttaaattcatagtagaattttaaaataggcaagatcc 10394614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 10143101 - 10143141
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||||||||||||||||||||||| || |||||||    
T  10143101 aaaatccatcaattttgattgcgattttacaatctcttata 10143141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 251 - 290
Target Start/End: Complemental strand, 6346882 - 6346843
Alignment:
Q  251 aaatccatcaattttgattgcgattttacgatttcttata 290  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  6346882 aaatccatcgattttgattgcgattttacaatttcttata 6346843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 290
Target Start/End: Original strand, 24719782 - 24719816
Alignment:
Q  256 catcaattttgattgcgattttacgatttcttata 290  Q
    |||| ||||||||||||||||||||||||||||||    
T  24719782 catcgattttgattgcgattttacgatttcttata 24719816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 610719 - 610683
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattca 188  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  610719 attgttgtcaaaatcccaacttaaatactaaaattca 610683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 7044964 - 7045004
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||  ||||||||||||||||||    
T  7044964 aaaatccatcgattttgattgatattttacgatttcttata 7045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 8011064 - 8011024
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    ||||| |||| ||||||||||||||||||| ||||||||||    
T  8011064 aaaatacatcgattttgattgcgattttacaatttcttata 8011024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 8744131 - 8744087
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttg 196  Q
    ||||||||| |||| ||||||||||||| ||||||||| ||||||    
T  8744131 attgttgtcgaaattccgacttaaatccaaaaattcaggattttg 8744087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 290
Target Start/End: Complemental strand, 9911335 - 9911299
Alignment:
Q  254 tccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  9911335 tccatcgattttgattgcgattttacaatttcttata 9911299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 17466280 - 17466320
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||| ||||||| ||||||||||    
T  17466280 aaaatccatcgattttgattgcaattttacaatttcttata 17466320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 36121024 - 36121064
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  36121024 aaaatccatcgattttgattgcgattttacaatttcctata 36121064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 7e-55; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 152 - 292
Target Start/End: Complemental strand, 13276395 - 13276255
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||||| ||||||||||||||  || |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  13276395 attgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcatcttcaacgacctaaatccatagtagaatcctaaaataggcaa 13276296  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaa 292  Q
    |||| ||| ||||||||||||||||||||||||||||||||    
T  13276295 aatcaatcgattttgattgcgattttacgatttcttataaa 13276255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 154 - 292
Target Start/End: Complemental strand, 19010073 - 19009935
Alignment:
Q  154 tgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaa 253  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| ||| ||||||||||||| |||||||||||| ||||||    
T  19010073 tgttgtcaaaatccggacttaaatcctaaaattcaggattttgcgacttttttcaccttcaatgacttaaatccatagtaaaattctaaaataagcaaaa 19009974  T
Q  254 tccatcaattttgattgcgattttacgatttcttataaa 292  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  19009973 tccatcgattttgattgcgattttacgatttcttataaa 19009935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 9955164 - 9955022
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||  ||||||| | |||||| ||||    
T  9955164 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgacttaaatccaatgtagaatcccaaaataagcaa 9955065  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  9955064 aatccatcgattttgattgcgattttacgatttcttataaact 9955022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 151 - 293
Target Start/End: Original strand, 23528655 - 23528797
Alignment:
Q  151 aattgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggca 250  Q
    |||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||| ||||||||||  |||||||||||||||| ||||||||||||    
T  23528655 aattgttgtcaaaatcccaacttaaatcttaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaatcctaaaataggca 23528754  T
Q  251 aaatccatcaattttgattgcgattttacgatttcttataaac 293  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||    
T  23528755 aaatctatcgattttgaatgcgattttacgatttcttataaac 23528797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 152 - 290
Target Start/End: Complemental strand, 41032799 - 41032661
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||| ||||||||||| || ||||||| ||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  41032799 attgttgtcaaaatctcgacttaaatcgtagaattcaggattttgcgattttcttcaccttcaacgactcaaatccatagtagaattctaaaataggcaa 41032700  T
Q  252 aatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||| ||||| ||||||||||||| ||||||||||    
T  41032699 aatccatcgattttaattgcgattttacaatttcttata 41032661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 25146897 - 25146756
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| | ||||||| |||    
T  25146897 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaatagacaa 25146798  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    | | |||||||||| ||||||| ||||||||||||||||||||    
T  25146797 agtacatcaattttaattgcga-tttacgatttcttataaact 25146756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 159 - 294
Target Start/End: Complemental strand, 16125580 - 16125442
Alignment:
Q  159 tcaaaatcccgacttaaatcctaaaattcagaattttgcgactttctt---caccttcaacgacctaaatccatagtagaattctaaaataggcaaaatc 255  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  16125580 tcaaaatcctgacttaaatcctaaaattcaggattttgcgactttctttttcaccttcaacgacctaaatccatagtaaaatcttaaaataggcaaaatc 16125481  T
Q  256 catcaattttgattgcgattttacgatttcttataaact 294  Q
    |||  |||||||||||||||||||||||| |||||||||    
T  16125480 cattgattttgattgcgattttacgattttttataaact 16125442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 153 - 294
Target Start/End: Complemental strand, 42180193 - 42180052
Alignment:
Q  153 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaa 252  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||||||||||| ||||||||||   |||||||||||||||||  ||||||||||||    
T  42180193 ttgttgtcaaaatcccaacttaaattctaaaattcaggattttgcgactttcttccccttcaacgagtcaaatccatagtagaatttcaaaataggcaaa 42180094  T
Q  253 atccatcaattttgattgcgattttacgatttcttataaact 294  Q
    || |||| |||||||||| |||| ||||||||||||||||||    
T  42180093 atacatcgattttgattgtgattctacgatttcttataaact 42180052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 12513283 - 12513423
Alignment:
Q  154 tgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaa 253  Q
    |||||||||||||||||||||||||||| |||  || |||||||||||||||||| ||||||||||  |||||||||||| |||  |||||||  |||||    
T  12513283 tgttgtcaaaatcccgacttaaatcctacaatctaggattttgcgactttcttcagcttcaacgactcaaatccatagtaaaatcataaaataatcaaaa 12513382  T
Q  254 tccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  12513383 tccatcgattttgattgcgattttacgatttcttataaact 12513423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 9327344 - 9327202
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||| ||||||| |||||||||||||||||| ||  |||||||||||||| |||||||||||||  ||||| |||||| ||| | ||||||| |||    
T  9327344 attgttgttaaaatcctgacttaaatcctaaaatttagggttttgcgactttctacaccttcaacgactcaaatctatagtaaaatcccaaaatagacaa 9327245  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  9327244 aatccatcgattttgattgcgattttacgatttcttataaact 9327202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 156 - 293
Target Start/End: Original strand, 13100195 - 13100332
Alignment:
Q  156 ttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatc 255  Q
    ||||||||||||| |||||||| |||||||  || ||||| ||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||| |    
T  13100195 ttgtcaaaatcccaacttaaattctaaaatcgaggattttacgactttcttcacgttcaacgactcaaatccatagtagaatcctaaaataggcaaaaac 13100294  T
Q  256 catcaattttgattgcgattttacgatttcttataaac 293  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  13100295 catcgattttgattgcgattttacaatttcttataaac 13100332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 152 - 291
Target Start/End: Complemental strand, 18304940 - 18304801
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttc-aacgacctaaatccatagtagaattctaaaataggca 250  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| ||||||  |||| |||||||||||   ||||||| ||    
T  18304940 attgttgtcaaaatcccaacttaaatcctaaaatccagtattttgcgactttcttcaccttcaaacgactcaaattcatagtagaatctcaaaatagaca 18304841  T
Q  251 aaatccatcaattttgattgcgattttacgatttcttataa 291  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  18304840 aaatccatcaattttgattgcga-tttacgatttcttataa 18304801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 9352192 - 9352050
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| |||  ||||| |||| ||| | | ||||||| |||    
T  9352192 attgttgtcaaaatcccgacttaaatcctaaaatccagggttttgcgactttcttcaccttcaaagactcaaatctatagcagagtcccaaaatagacaa 9352093  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||||| || |||||||||||||||||| |||||||||||||||    
T  9352092 aatccgtcgattttgattgcgattttatgatttcttataaact 9352050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 152 - 278
Target Start/End: Complemental strand, 21846397 - 21846271
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||||||||||| |||||||||||||||  ||||||||||||||||   |||||||  ||    
T  21846397 attgttgtcaaaatcccgagttaaatcctaaaatccaggattttgcgacttttttcaccttcaacgactcaaatccatagtagaatctcaaaatagaaaa 21846298  T
Q  252 aatccatcaattttgattgcgatttta 278  Q
    |||||||| ||||||||||||||||||    
T  21846297 aatccatcgattttgattgcgatttta 21846271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 153 - 294
Target Start/End: Complemental strand, 17869873 - 17869737
Alignment:
Q  153 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaa 252  Q
    ||||||||||||||| |||||||||| ||||     | ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||    
T  17869873 ttgttgtcaaaatcctgacttaaatcttaaa-----ggattttgcgactttcttcaccttcgacgacctaaatccacagtagaatcctaaaataggcaaa 17869779  T
Q  253 atccatcaattttgattgcgattttacgatttcttataaact 294  Q
    || | || ||||||||||| ||||||||||||||| ||||||    
T  17869778 attcttcgattttgattgcaattttacgatttcttttaaact 17869737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 152 - 285
Target Start/End: Complemental strand, 17056128 - 17055995
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||| |||||||||| || |||||||||||||| ||| ||||||| | ||||| |||||||||||||  | ||||||||||||||| ||||||| | ||    
T  17056128 attgtagtcaaaatcctgatttaaatcctaaaatccaggattttgcaattttctccaccttcaacgactcagatccatagtagaattttaaaataagtaa 17056029  T
Q  252 aatccatcaattttgattgcgattttacgatttc 285  Q
    |||||||| |||||||||||||||||||||||||    
T  17056028 aatccatcgattttgattgcgattttacgatttc 17055995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 9128969 - 9128827
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||| |||||| ||||||||||||||||| | || || |||||||||||||||| || ||||||  ||||  ||||||||||  |||||||| |||    
T  9128969 attgttgttaaaatcacgacttaaatcctaaaaattaggatcttgcgactttcttcacatttaacgactcaaatttatagtagaatcttaaaatagacaa 9128870  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||| |||| |||||||||||||||| |||||||||||||||||    
T  9128869 aattcatcgattttgattgcgatttgacgatttcttataaact 9128827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 30619075 - 30619142
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgac 219  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||    
T  30619075 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgcgattttcttcaccttcaacgac 30619142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 14074501 - 14074404
Alignment:
Q  150 taattgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaatag 247  Q
    |||||||||||||||||||| |||||||||||||||  || ||||||||||||||||||  |||||||||  ||||||| ||||||||  ||||||||    
T  14074501 taattgttgtcaaaatcccgtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcttaaaatag 14074404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 256
Target Start/End: Complemental strand, 18337650 - 18337547
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||||||||| | |||||||| ||| ||||||| ||||| |||||||||||||||  |||||||||| ||||  | |||||||||||    
T  18337650 attgttgtcaaaatcccgacttata-cctaaaatccaggattttgcaactttattcaccttcaacgactcaaatccatagcagaaccccaaaataggcaa 18337552  T
Q  252 aatcc 256  Q
    |||||    
T  18337551 aatcc 18337547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 12800710 - 12800629
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagta 233  Q
    |||||||| |||||||| ||||||||||||||||| || ||||| ||||||||||||| |||||||||  ||||| ||||||    
T  12800710 attgttgtgaaaatcccaacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagta 12800629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 32881415 - 32881467
Alignment:
Q  240 taaaataggcaaaatccatcaattttgattgcgattttacgatttcttataaa 292  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  32881415 taaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaa 32881467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 18228278 - 18228340
Alignment:
Q  229 tagtagaattctaaaataggcaaaatccatcaattttgattgcgattttacgatttcttataaa 292  Q
    ||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  18228278 tagtagaatcccaaaataggcaaaatccatcaattttgattg-gattttatgatttcttataaa 18228340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 34478899 - 34478833
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacga 218  Q
    |||||||| |||||||||||||||||| |||||||  | |||||| |||||||||||||||||||||    
T  34478899 attgttgttaaaatcccgacttaaatcttaaaatttgggattttgtgactttcttcaccttcaacga 34478833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 27917578 - 27917496
Alignment:
Q  155 gttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaat 237  Q
    ||||||||||||||||||||||| || ||||  || ||||||||| ||| || ||||||||| ||| |||| ||||| |||||    
T  27917578 gttgtcaaaatcccgacttaaattctgaaatctaggattttgcgattttatttaccttcaacaacccaaattcatagcagaat 27917496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 47785792 - 47785837
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgc 197  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||    
T  47785792 attgttgtcaaaatcccaacataaatcctaaaattcaggattttgc 47785837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 8772715 - 8772755
Alignment:
Q  163 aatcccgacttaaatcctaaaattcagaattttgcgacttt 203  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  8772715 aatcccgacttaaatcccaaaatccagaattttgcgacttt 8772755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 13100391 - 13100431
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  13100391 aaaatccatcgattttgattgcgattttaagatttcttata 13100431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 251 - 294
Target Start/End: Original strand, 47785958 - 47786001
Alignment:
Q  251 aaatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||||  |||||||||| ||||||||||||||||||||||    
T  47785958 aaatccatcggttttgattgcaattttacgatttcttataaact 47786001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 290
Target Start/End: Complemental strand, 16125379 - 16125343
Alignment:
Q  254 tccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  16125379 tccatcgattttgattgcgattttacaatttcttata 16125343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 18304739 - 18304699
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  18304739 aaaatccatcgattttgattgcgattttacaatttcctata 18304699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 21846202 - 21846162
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    ||||| |||| ||||||||||||||||||| ||||||||||    
T  21846202 aaaattcatctattttgattgcgattttacaatttcttata 21846162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 23528857 - 23528897
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  23528857 aaaatccatcgattttgattgcgattttacaatttcctata 23528897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 3e-54; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 151 - 294
Target Start/End: Complemental strand, 15528240 - 15528097
Alignment:
Q  151 aattgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggca 250  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||| |||||||||||  |||||||| ||    
T  15528240 aattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcacctttaacgacttaaattcatagtagaatcttaaaatagaca 15528141  T
Q  251 aaatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||||||||| |||| |||||||||||||||||||||||||||||    
T  15528140 aaatccatcgatttcgattgcgattttacgatttcttataaact 15528097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 17250057 - 17250199
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||||||| |||||| | |||||||||||    
T  17250057 attgttgttaaaatcccgacttaaatcctaaaatccaggattttgcaactttcttcaccttcaacgacttaaatccatactagaatcccaaaataggcaa 17250156  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||| |||  ||||||||||||||||||||||||||||||||||    
T  17250157 aattcattgattttgattgcgattttacgatttcttataaact 17250199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 164 - 294
Target Start/End: Original strand, 23897823 - 23897953
Alignment:
Q  164 atcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatcaatt 263  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||||||||||| ||||||||| |||    
T  23897823 atcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcgaaatccatcgatt 23897922  T
Q  264 ttgattgcgattttacgatttcttataaact 294  Q
    |||||||||||||||||||||||||||||||    
T  23897923 ttgattgcgattttacgatttcttataaact 23897953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 30912541 - 30912399
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||  ||||||||| ||||||   |||||||||||    
T  30912541 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccataatagaatcacaaaataggcaa 30912442  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  30912441 aatccatagattttgattgcgattttacgatttcttataaact 30912399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 290
Target Start/End: Complemental strand, 27233406 - 27233268
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||| | ||||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||||||||||||| | ||||||| |||    
T  27233406 attgttgtcaaactaccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 27233307  T
Q  252 aatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  27233306 aatccatcgattttgattgcgattttatgatttcttata 27233268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 7223519 - 7223654
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||       | ||||||||||||||||||| |||||| ||||    
T  7223519 attgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcacct-------cttaaatccatagtagaattccaaaataagcaa 7223611  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  7223612 aatccatcgattttgattgcgattttacgatttcttataaact 7223654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 17543869 - 17543727
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||| |||||||||  ||||||||||||||||  ||||||| ||||    
T  17543869 attgttgtcaaaatctcgacttaaatcctaaaattcaggattttgcgacttttttcactttcaacgactcaaatccatagtagaatcttaaaataagcaa 17543770  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||| ||  ||||||||||||||||||| ||||||||||||||    
T  17543769 aatctatggattttgattgcgattttactatttcttataaact 17543727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 152 - 292
Target Start/End: Complemental strand, 7918510 - 7918370
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||| |||| ||| ||||    
T  7918510 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttttttcaccttcaacgacttaaatccatagtaaaatcctaacataagcaa 7918411  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaa 292  Q
    |||| ||| |||||||||| |||||| |||||| |||||||    
T  7918410 aatcaatcgattttgattgggattttgcgattttttataaa 7918370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 26053425 - 26053283
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||||||||||||| ||||||  || ||||||||||||||||||||||||| |||  |||| |||| |||||| | |||||| ||||    
T  26053425 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaa 26053326  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  26053325 aatccatcaattttgattgtcattttacgatttcttataaact 26053283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 26073478 - 26073336
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||||||||||||| ||||||  || ||||||||||||||||||||||||| |||  |||| |||| |||||| | |||||| ||||    
T  26073478 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaa 26073379  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  26073378 aatccatcaattttgattgtcattttacgatttcttataaact 26073336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 152 - 277
Target Start/End: Complemental strand, 6943589 - 6943464
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||| ||||||||||   ||||||| |||    
T  6943589 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcgatagtagaatctcaaaatagacaa 6943490  T
Q  252 aatccatcaattttgattgcgatttt 277  Q
    ||| |||| |||||||||||||||||    
T  6943489 aattcatcgattttgattgcgatttt 6943464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 294
Target Start/End: Complemental strand, 10509148 - 10509010
Alignment:
Q  156 ttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatc 255  Q
    |||||||||||| ||||||||||||||||||||||| |||| |||||||||||| ||||| |||  ||||  |||||||||| | ||||||||||||||     
T  10509148 ttgtcaaaatccagacttaaatcctaaaattcagaaatttgtgactttcttcacattcaatgactcaaatttatagtagaatcccaaaataggcaaaatt 10509049  T
Q  256 catcaattttgattgcgattttacgatttcttataaact 294  Q
    |||| ||||||||| ||||||||||| || |||||||||    
T  10509048 catcgattttgattacgattttacgacttattataaact 10509010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 11327700 - 11327558
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||||||||||| |||||||| ||   |||||||  |||||||| |||||| ||| ||||||||||||||||| | |||||||||||    
T  11327700 attgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggcaa 11327601  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||| |||| ||||| |||||||||||||| |||||||| ||||    
T  11327600 aattcatcgattttaattgcgattttacgttttcttatgaact 11327558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 19748333 - 19748475
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||| |||||||||||||||||||| || ||| ||| |||||| || |||||||||||| || |||  |||||| |||||||||  ||||||||||||    
T  19748333 attgttttcaaaatcccgacttaaatcttacaatccaggattttgagattttcttcacctttaatgactcaaatccgtagtagaatcttaaaataggcaa 19748432  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||| |||| |||||||||| |||||||||||||||||||||||    
T  19748433 aattcatcgattttgattgtgattttacgatttcttataaact 19748475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 17103202 - 17103337
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||       || |||||||||  |||| ||||||||||| | ||||||| |||    
T  17103202 attgttgtcaaaatcccgacttaaatcttaaaattcaggattttgcgac-------actttcaacgactcaaatgcatagtagaatcccaaaatagacaa 17103294  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| ||||||||| ||||||||||||||||||||||||    
T  17103295 aatccatcgattttgattacgattttacgatttcttataaact 17103337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 160 - 293
Target Start/End: Complemental strand, 22499006 - 22498873
Alignment:
Q  160 caaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatc 259  Q
    ||||||||| ||| |||||||||| | || ||||||||||||||||||||||| ||||||  |||||||||||| |||   ||||||| |||||||||||    
T  22499006 caaaatcccaactaaaatcctaaattccacaattttgcgactttcttcaccttgaacgactcaaatccatagtacaatctcaaaatagacaaaatccatc 22498907  T
Q  260 aattttgattgcgattttacgatttcttataaac 293  Q
     ||||| ||||| |||||||||||||||||||||    
T  22498906 gattttaattgcaattttacgatttcttataaac 22498873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 155 - 293
Target Start/End: Complemental strand, 2912373 - 2912236
Alignment:
Q  155 gttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaat 254  Q
    |||||||||||||||||||||||| ||||||| || ||||||| ||||||| || |||||||||   |||| |||||||||||  ||||||| |||||||    
T  2912373 gttgtcaaaatcccgacttaaatcttaaaatttaggattttgcaactttctccatcttcaacgattcaaat-catagtagaatcttaaaataagcaaaat 2912275  T
Q  255 ccatcaattttgattgcgattttacgatttcttataaac 293  Q
     |||| ||||||||||| |||||||||||| ||||||||    
T  2912274 tcatcgattttgattgcaattttacgattttttataaac 2912236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 21354748 - 21354882
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||| |||||||||||||||| | |        ||||||||| |||||||||||| ||||||||| ||||||| | ||||||| |||    
T  21354748 attgttgtcaaaatcccaacttaaatcctaaaatcctg--------gactttctttaccttcaacgacttaaatccatggtagaatcccaaaatagacaa 21354839  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||||||||  |||| ||||||||||||||||||||||||||||    
T  21354840 aatccatcgttttttattgcgattttacgatttcttataaact 21354882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 18491166 - 18491081
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaat 237  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||  |||| |||||||||||||||  |||||||||| |||||    
T  18491166 attgctgtcaaaatcccgacttaaatcctaaaatccagaattttgcatctttattcaccttcaacgactcaaatccatagcagaat 18491081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 3574059 - 3573984
Alignment:
Q  154 tgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccat 229  Q
    |||| ||||||| ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||  ||||||||    
T  3574059 tgttttcaaaattccgacttaaattctaaaatccagaatttcgcgactttcttcaccttcaacgactcaaatccat 3573984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 5422877 - 5422810
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgac 219  Q
    |||||||||||||||||||||||||| ||||||||||  ||||||| ||||| |||||||||||||||    
T  5422877 attgttgtcaaaatcccgacttaaatactaaaattcatgattttgcaactttattcaccttcaacgac 5422810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 10508945 - 10508905
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  10508945 aaaatccatcaattttgattgcgattttacaatttcttata 10508905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 4842026 - 4841946
Alignment:
Q  172 ttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaat 254  Q
    |||||||||||||||  | ||||||||||||| |||||||||||||||  |||||| ||| ||||| | | ||||||||||||    
T  4842026 ttaaatcctaaaatt--ggattttgcgactttattcaccttcaacgactcaaatccgtagcagaatcccataataggcaaaat 4841946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 10958316 - 10958253
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 215  Q
    ||||||||||||||| |||||||||||  ||||||||| ||||||||||||   ||||||||||    
T  10958316 attgttgtcaaaatcgcgacttaaatctcaaaattcaggattttgcgacttgactcaccttcaa 10958253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 8545087 - 8545030
Alignment:
Q  159 tcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaac 216  Q
    |||||||||||| ||||||||||||||| || |||||||||||||  |||| ||||||    
T  8545087 tcaaaatcccgatttaaatcctaaaatttaggattttgcgactttactcactttcaac 8545030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 250 - 289
Target Start/End: Complemental strand, 4841757 - 4841718
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttat 289  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  4841757 aaaatacatcgattttgattgcgattttacgatttcttat 4841718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 12245109 - 12245171
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttca 214  Q
    |||||||| ||||||  || ||||||| |||||||||| ||||||||||||| ||||| ||||    
T  12245109 attgttgttaaaatcatgatttaaatcttaaaattcagtattttgcgactttattcactttca 12245171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 2912189 - 2912148
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttataa 291  Q
    ||||||| || ||||||||||||||||||| |||||||||||    
T  2912189 aaaatccgtcgattttgattgcgattttacaatttcttataa 2912148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 17103391 - 17103436
Alignment:
Q  245 taggcaaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||| |||||||||| ||||||||||||||||||| ||||| ||||    
T  17103391 taggtaaaatccatcgattttgattgcgattttacaatttcctata 17103436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 281
Target Start/End: Complemental strand, 18490565 - 18490536
Alignment:
Q  252 aatccatcaattttgattgcgattttacga 281  Q
    ||||||||||||||||||||||||||||||    
T  18490565 aatccatcaattttgattgcgattttacga 18490536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 18491063 - 18490998
Alignment:
Q  179 ctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaa 244  Q
    ||||||| ||| ||||||| ||||| ||||||||||| |||  |||||||||| ||||| ||||||    
T  18491063 ctaaaatccagcattttgcaactttattcaccttcaatgactcaaatccatagcagaatcctaaaa 18490998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 7359848 - 7359915
Alignment:
Q  151 aattgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgac 219  Q
    |||||||||||||||  ||| |||| |||||||||| |  |||| |||||||| |||||||||||||||    
T  7359848 aattgttgtcaaaatttcgatttaa-tcctaaaatttaagatttagcgactttattcaccttcaacgac 7359915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 7918278 - 7918238
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  7918278 aaaatccatcgattttgattgcgattttacaatttcctata 7918238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 19748534 - 19748574
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  19748534 aaaatccatcgattttgattgcgattttacaatttcctata 19748574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 22498368 - 22498328
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  22498368 aaaatccatcgattttgattgcgattttacaatttcctata 22498328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 1e-53; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 29067284 - 29067426
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||| | ||||||| |||    
T  29067284 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagacaa 29067383  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| |||||||||| |||||||||||||||||||||||    
T  29067384 aatccatcgattttgattgtgattttacgatttcttataaact 29067426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 153 - 292
Target Start/End: Complemental strand, 3449419 - 3449281
Alignment:
Q  153 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaa 252  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |  ||||| |||||||||| ||||||||||||||    
T  3449419 ttgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttctttaccttcaacg-ctaaaatctatagtagaatcctaaaataggcaaa 3449321  T
Q  253 atccatcaattttgattgcgattttacgatttcttataaa 292  Q
    ||||||  ||||| ||||||||||||||||||||||||||    
T  3449320 atccatagatttttattgcgattttacgatttcttataaa 3449281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 20756039 - 20756181
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||| ||||||||||||||| |||  ||||||||||||||||  ||||||||||||    
T  20756039 attgttgtcaaaatcccgacttaaattataaaattcaggattttgcgattttcttcaccttcaatgactcaaatccatagtagaatcttaaaataggcaa 20756138  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||    
T  20756139 aatcaatcgattttgattgcaattttacgatttcttataaact 20756181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 152 - 291
Target Start/End: Original strand, 28745770 - 28745909
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||  |||| |||||||||||   ||||||| |||    
T  28745770 attgttgtcaaaatcccgatttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatctcaaaatagacaa 28745869  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataa 291  Q
    ||| |||| |||||||||||||||||||||||||||||||    
T  28745870 aattcatcgattttgattgcgattttacgatttcttataa 28745909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 157 - 294
Target Start/End: Original strand, 17064326 - 17064463
Alignment:
Q  157 tgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatcc 256  Q
    |||||||||||||||||||||| |||||||||| ||||||||| | | |||||||||||||||   ||| ||||||||||||||||||||| |||||| |    
T  17064326 tgtcaaaatcccgacttaaatcttaaaattcaggattttgcgattgtgttcaccttcaacgactccaattcatagtagaattctaaaatagacaaaattc 17064425  T
Q  257 atcaattttgattgcgattttacgatttcttataaact 294  Q
    ||| ||||| ||||||||||||||||||||||||||||    
T  17064426 atcgatttttattgcgattttacgatttcttataaact 17064463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 8156260 - 8156117
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaa-taggca 250  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||| ||| ||||||||||| |||  |||||||||||| ||| | |||| ||| ||    
T  8156260 attgttgtcaaaatcccaacttaaattctaaaattcagaattttacgatttttttcaccttcaatgactcaaatccatagtataatcccaaaattagaca 8156161  T
Q  251 aaatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  8156160 aaatccatcgattttgattgcgattttacgatttcttataaact 8156117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 161 - 289
Target Start/End: Original strand, 21963438 - 21963565
Alignment:
Q  161 aaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatca 260  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||||| ||||||  |||||||||||| ||| |||||||| ||||||||||||     
T  21963438 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21963537  T
Q  261 attttgattgcgattttacgatttcttat 289  Q
    |||||||| |||||||| |||||||||||    
T  21963538 attttgatagcgatttt-cgatttcttat 21963565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 161 - 289
Target Start/End: Original strand, 21985874 - 21986001
Alignment:
Q  161 aaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatca 260  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||||| ||||||  |||||||||||| ||| |||||||| ||||||||||||     
T  21985874 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21985973  T
Q  261 attttgattgcgattttacgatttcttat 289  Q
    |||||||| |||||||| |||||||||||    
T  21985974 attttgatagcgatttt-cgatttcttat 21986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 155 - 294
Target Start/End: Original strand, 39427905 - 39428044
Alignment:
Q  155 gttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaat 254  Q
    |||||||||||||||| ||||||  |||||| | | ||||||| ||||||||||| |||||||||  ||||| |||||||||| | ||||||| |||| |    
T  39427905 gttgtcaaaatcccgatttaaattttaaaatcctggattttgcaactttcttcacgttcaacgactcaaatcgatagtagaatcccaaaatagacaaagt 39428004  T
Q  255 ccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  39428005 ccatcgattttgattgcgattttacgatttcttataaact 39428044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 22356182 - 22356039
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttctt-caccttcaacgacctaaatccatagtagaattctaaaataggca 250  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||  || ||| || || ||||||| |  | ||| ||||||||||| |||||||| |||    
T  22356182 attgttatcaaaattccgacttaaatcctaaaattcaggattttaagattttttttcagcttcaacaatttgaattcatagtagaatcctaaaataagca 22356083  T
Q  251 aaatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  22356082 aaatccatgaattttgattgcgattttacgatttcttataaact 22356039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 24620332 - 24620187
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgac---tttcttcaccttcaacgacctaaatccatagtagaattctaaaatagg 248  Q
    |||||||||||||| |||||||||||||||||||| |  ||||||||||   |||||||||||||||||||  |||| || ||||||||   ||||||||    
T  24620332 attgttgtcaaaattccgacttaaatcctaaaatttaagattttgcgacgactttcttcaccttcaacgactcaaattcacagtagaatctcaaaatagg 24620233  T
Q  249 caaaatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||| |||| ||||| ||||| ||||||||||||||||||||||    
T  24620232 caaaattcatcgattttaattgcaattttacgatttcttataaact 24620187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 285
Target Start/End: Complemental strand, 24649818 - 24649684
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaat-aggca 250  Q
    ||||||||||||||||||||||||||| ||||||  || |||||  ||||| ||||||||||||||||  |||||||||||||||||| ||||| | |||    
T  24649818 attgttgtcaaaatcccgacttaaatcgtaaaatctaggattttttgacttgcttcaccttcaacgactcaaatccatagtagaattccaaaataaagca 24649719  T
Q  251 aaatccatcaattttgattgcgattttacgatttc 285  Q
    |||| |||||||||||| || ||||||||||||||    
T  24649718 aaattcatcaattttgactgtgattttacgatttc 24649684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 278
Target Start/End: Complemental strand, 30727820 - 30727694
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||| ||||||||| |||||||||| |||||| | ||||||| |||||||||||||||||||||||  ||||| |||||||||| | ||||||| |||    
T  30727820 attgttatcaaaatcctgacttaaatcttaaaatcctgaattttacgactttcttcaccttcaacgactcaaatctatagtagaatcccaaaatagacaa 30727721  T
Q  252 aatccatcaattttgattgcgatttta 278  Q
    ||| |||| ||||||||||||||||||    
T  30727720 aattcatcgattttgattgcgatttta 30727694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 3181653 - 3181511
Alignment:
Q  9 tggacatcatgactccgatgctaaataaatgatccc-ttttttcctttgcctggtatctcaatgaccttgtgtagatactagcaaatgtag-nnnnnnnn 106  Q
    |||| |||||| |||||||||||||| ||||||||| |||||| |||||||||||||  |||||||||||||||||||||| |||||||||             
T  3181653 tggaaatcatgtctccgatgctaaatgaatgatcccctttttttctttgcctggtataccaatgaccttgtgtagatactaacaaatgtagttttttttc 3181554  T
Q  107 nncttcttatcagtaatgttagtttcttgcactttttagggtt 149  Q
      |||||||||||||||||||||||| ||||||||||||||||    
T  3181553 ttcttcttatcagtaatgttagtttcatgcactttttagggtt 3181511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 152 - 289
Target Start/End: Original strand, 22137278 - 22137414
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||| | ||||||| ||||||||||||||||||||  || || |||||||||||||||| |||| |  |||||||||||| ||| | |||||| ||||    
T  22137278 attgtttttaaaatcctgacttaaatcctaaaattcaagatgttacgactttcttcaccttgaacgcctcaaatccatagtaaaatcccaaaatatgcaa 22137377  T
Q  252 aatccatcaattttgattgcgattttacgatttcttat 289  Q
    |||||||| ||||| ||||||||||| |||||||||||    
T  22137378 aatccatcgattttaattgcgatttt-cgatttcttat 22137414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 22494892 - 22494780
Alignment:
Q  170 acttaaatcctaaaattcaga-attttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatcaattttgat 268  Q
    |||||||||||||||| | || ||||||||||||| |||||||||||||||  |||| ||||||||||| ||||||||  |||||| |||| ||||||||    
T  22494892 acttaaatcctaaaat-ctgagattttgcgacttttttcaccttcaacgactaaaattcatagtagaatcctaaaataaacaaaattcatcgattttgat 22494794  T
Q  269 tgcgattttacgat 282  Q
    ||||||||||||||    
T  22494793 tgcgattttacgat 22494780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 152 - 256
Target Start/End: Complemental strand, 15806634 - 15806531
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||||||||||| ||||||||||| |||  |||||||||| ||||| | |||| ||||||    
T  15806634 attgttgtcaaaatcc-gacttaaatcctacaatccagaattttgcgactttattcaccttcaatgactcaaatccatagcagaatcccaaaacaggcaa 15806536  T
Q  252 aatcc 256  Q
    |||||    
T  15806535 aatcc 15806531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 292
Target Start/End: Complemental strand, 25870505 - 25870356
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttc----aacgacctaaatccatagtagaattctaaaatag 247  Q
    ||||||||||||||| |||||||||||||||||| ||  |||||| ||||||||||| ||||    ||||||  |||| | ||||||||    |||||||    
T  25870505 attgttgtcaaaatctcgacttaaatcctaaaatccaagattttgtgactttcttcatcttcaacgaacgactcaaattcgtagtagaacctcaaaatag 25870406  T
Q  248 gcaaaatccatc-----aattttgattgcgattttacgatttcttataaa 292  Q
    ||||||||||||      ||||||||||||||||||||||||||||||||    
T  25870405 gcaaaatccatcgatttgattttgattgcgattttacgatttcttataaa 25870356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 27676356 - 27676460
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||| |||||||||| |||||| ||| ||||||||||||| ||||||||| | |||  |||||||||| ||||| | |||||||| ||    
T  27676356 attgttgtcaaaatcctgacttaaatcgtaaaatgcaggattttgcgactttattcaccttctatgactcaaatccatagcagaatcccaaaataggtaa 27676455  T
Q  252 aatcc 256  Q
    |||||    
T  27676456 aatcc 27676460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 254
Target Start/End: Original strand, 28135723 - 28135824
Alignment:
Q  153 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaa 252  Q
    ||||||||||||| |||| ||||||| |||||||||| ||||||||||||| ||||| ||||  |||  |||||||||| | |||||| |||||||||||    
T  28135723 ttgttgtcaaaattccgatttaaatcgtaaaattcaggattttgcgactttattcactttcagtgactcaaatccatagcaaaattctcaaataggcaaa 28135822  T
Q  253 at 254  Q
    ||    
T  28135823 at 28135824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 294
Target Start/End: Original strand, 42696920 - 42696989
Alignment:
Q  225 tccatagtagaattctaaaataggcaaaatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||||||||   |||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  42696920 tccatagtagaatctcaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaact 42696989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 17796377 - 17796477
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||| |||||||||||| ||||||  || ||||| ||||||| |||| ||||||| ||  |||| ||||| ||||| ||||||||| |||    
T  17796377 attgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaatagacaa 17796476  T
Q  252 a 252  Q
    |    
T  17796477 a 17796477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 17796486 - 17796586
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||  ||| ||||||| ||||||  || ||||| ||||||| |||||||||||| || ||||| ||||| ||||| ||||||||| |||    
T  17796486 attgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaatagacaa 17796585  T
Q  252 a 252  Q
    |    
T  17796586 a 17796586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 19104817 - 19104917
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||| |||||||||||| ||||||  || ||||| ||||||| |||| ||||||| ||  |||| ||||| ||||| ||||||||| |||    
T  19104817 attgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaatagacaa 19104916  T
Q  252 a 252  Q
    |    
T  19104917 a 19104917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 19104926 - 19105026
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||  ||| ||||||| ||||||  || ||||| ||||||| |||||||||||| || ||||| ||||| ||||| ||||||||| |||    
T  19104926 attgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaatagacaa 19105025  T
Q  252 a 252  Q
    |    
T  19105026 a 19105026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 10873065 - 10872971
Alignment:
Q  162 aaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatcc 256  Q
    ||||||||| | |||||||||||| ||| |||||| ||  || |||||||||||||||  |||||||||| |||||   ||||||||||||||||    
T  10873065 aaatcccgattgaaatcctaaaatccaggattttgtgatattattcaccttcaacgactcaaatccatagcagaatctcaaaataggcaaaatcc 10872971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 13005927 - 13005987
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcacctt 212  Q
    ||||||||||||||| ||||||||||   |||||||| |||||||||||||| ||||||||    
T  13005927 attgttgtcaaaatctcgacttaaatttcaaaattcataattttgcgactttattcacctt 13005987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 17796272 - 17796368
Alignment:
Q  156 ttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaa 252  Q
    |||||||||| || ||||||||| ||||||  || |||||| |||||| |||||||||||| ||  |||| ||||| ||||| ||||||||| ||||    
T  17796272 ttgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaatagacaaa 17796368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 19104712 - 19104808
Alignment:
Q  156 ttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaa 252  Q
    |||||||||| || ||||||||| ||||||  || |||||| |||||| |||||||||||| ||  |||| ||||| ||||| ||||||||| ||||    
T  19104712 ttgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaatagacaaa 19104808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 42696870 - 42696914
Alignment:
Q  156 ttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgac 200  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||    
T  42696870 ttgtcaaaatcccgacttaaatcataaaattcaggattttgcgac 42696914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 3449238 - 3449198
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  3449238 aaaatccatcaattttgattgcgattttacattttcttata 3449198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 6136497 - 6136457
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  6136497 aaaatccatcgattttgattgtgattttacgatttcttata 6136457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 17796771 - 17796807
Alignment:
Q  253 atccatcaattttgattgcgattttacgatttcttat 289  Q
    ||||||||||||||||| |||||||||||||||||||    
T  17796771 atccatcaattttgatttcgattttacgatttcttat 17796807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 19105211 - 19105247
Alignment:
Q  253 atccatcaattttgattgcgattttacgatttcttat 289  Q
    ||||||||||||||||| |||||||||||||||||||    
T  19105211 atccatcaattttgatttcgattttacgatttcttat 19105247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 25870250 - 25870210
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||||||||    
T  25870250 aaaatccatcgattttgattgcgattttacaatttcttata 25870210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 10872643 - 10872603
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||||||||| |||  |||||||||||||||||||    
T  10872643 aaaatccatcaatttttattctgattttacgatttcttata 10872603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 13286145 - 13286185
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||| |||| |||||||||||||||||||    
T  13286145 aaaatccatcgattttcattgtgattttacgatttcttata 13286185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 17064508 - 17064548
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||| ||||||| ||||||||||    
T  17064508 aaaatccatcgattttgattgcaattttacaatttcttata 17064548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 20756223 - 20756263
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  20756223 aaaatccatcgattttgattgcgattttacaatttcctata 20756263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 21963632 - 21963672
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    ||||||||||||||||||||  | |||||||||||||||||    
T  21963632 aaaatccatcaattttgattctggttttacgatttcttata 21963672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 21986068 - 21986108
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    ||||||||||||||||||||  | |||||||||||||||||    
T  21986068 aaaatccatcaattttgattctggttttacgatttcttata 21986108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 22137478 - 22137518
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    ||||||||||||||||||||  | |||||||||||||||||    
T  22137478 aaaatccatcaattttgattttggttttacgatttcttata 22137518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 27676637 - 27676677
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||  |||||||||| |||||||||||||||||||    
T  27676637 aaaatccattgattttgattgtgattttacgatttcttata 27676677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 28745977 - 28746017
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  28745977 aaaatccatcgattttgattgcgattttacaatttcctata 28746017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 39428104 - 39428144
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  39428104 aaaatccatcgattttgattgcgattttacaatttcctata 39428144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 42697049 - 42697089
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||| |||| |||||||||||    
T  42697049 aaaatccatcgattttgattgcgagtttatgatttcttata 42697089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 4e-50; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 152 - 292
Target Start/End: Original strand, 5922049 - 5922189
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||| || |||||||||||||| | ||||||| |||    
T  5922049 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttatatccatagtagaatcccaaaatagacaa 5922148  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaa 292  Q
    |||||||| ||||||||||||||||| ||||||||||||||    
T  5922149 aatccatcgattttgattgcgattttgcgatttcttataaa 5922189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 15294672 - 15294812
Alignment:
Q  154 tgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaa 253  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||  ||||| |||||||||| | |||||||||||||    
T  15294672 tgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaataggcaaaa 15294771  T
Q  254 tccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  15294772 tccatcgattttgattgcgattttacaatttcttataaact 15294812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 15475041 - 15475181
Alignment:
Q  154 tgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaa 253  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||  ||||| |||||||||| | |||||||||||||    
T  15475041 tgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaataggcaaaa 15475140  T
Q  254 tccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  15475141 tccatcgattttgattgcgattttacaatttcttataaact 15475181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 11879600 - 11879742
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||| ||||||||||| |||||||||  ||||| |||||||||| |||||||||| ||    
T  11879600 attgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaataggaaa 11879699  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||| |||| ||||||||||||||||||||||||||||||||||    
T  11879700 aattcatcgattttgattgcgattttacgatttcttataaact 11879742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 11897016 - 11897158
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||| ||||||||||| |||||||||  ||||| |||||||||| |||||||||| ||    
T  11897016 attgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaataggaaa 11897115  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||| |||| ||||||||||||||||||||||||||||||||||    
T  11897116 aattcatcgattttgattgcgattttacgatttcttataaact 11897158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 156 - 284
Target Start/End: Complemental strand, 3094378 - 3094250
Alignment:
Q  156 ttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatc 255  Q
    ||||||||||  ||||||||||| |||||||||| ||||||| |||||||||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  3094378 ttgtcaaaatttcgacttaaatcttaaaattcaggattttgctactttcttcaccttcaacgactcaaatccatagtagaatcctaaaataggcaaaatc 3094279  T
Q  256 catcaattttgattgcgattttacgattt 284  Q
    |||| ||||||||||||||||||||||||    
T  3094278 catcgattttgattgcgattttacgattt 3094250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 154 - 293
Target Start/End: Complemental strand, 19704583 - 19704443
Alignment:
Q  154 tgttgtcaaaatcccgacttaaatcctaaaattca-gaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaa 252  Q
    ||||||||||||||| ||||||||| ||||||||| |  ||||||||||||||||||||||||||||  |||||||||||||||||| | ||||||||||    
T  19704583 tgttgtcaaaatcccaacttaaatcttaaaattcaaggtttttgcgactttcttcaccttcaacgactcaaatccatagtagaattccataataggcaaa 19704484  T
Q  253 atccatcaattttgattgcgattttacgatttcttataaac 293  Q
    ||||||| ||||||||||| |||||||||||||||||||||    
T  19704483 atccatcgattttgattgcaattttacgatttcttataaac 19704443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 156 - 294
Target Start/End: Original strand, 31424167 - 31424305
Alignment:
Q  156 ttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatc 255  Q
    |||||||||||| ||||||||| ||||||||||| ||||| ||||||||||| | |||||||||  |||||||||| ||||| | |||||||||||||||    
T  31424167 ttgtcaaaatcctgacttaaattctaaaattcaggattttacgactttcttccctttcaacgactcaaatccatagaagaatcccaaaataggcaaaatc 31424266  T
Q  256 catcaattttgattgcgattttacgatttcttataaact 294  Q
    |||  ||||||||||||||||||||||||||||||||||    
T  31424267 cattgattttgattgcgattttacgatttcttataaact 31424305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 152 - 293
Target Start/End: Original strand, 17646993 - 17647134
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||  |||| ||||||||||| | |||||||| ||    
T  17646993 attgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaataggaaa 17647092  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaac 293  Q
    ||| |||| ||||||||||  |||| ||||||||||||||||    
T  17647093 aattcatcgattttgattgttatttaacgatttcttataaac 17647134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 151 - 289
Target Start/End: Original strand, 45403028 - 45403166
Alignment:
Q  151 aattgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggca 250  Q
    |||||||||||||||| |||||||||| ||||||| ||  |||||||||||||||| |||||||||||| ||||||||||| |||||   |||||| |||    
T  45403028 aattgttgtcaaaatcgcgacttaaattctaaaatccaagattttgcgactttcttgaccttcaacgacttaaatccatagaagaatctcaaaataagca 45403127  T
Q  251 aaatccatcaattttgattgcgattttacgatttcttat 289  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  45403128 aaatccatcgattttgattgcgattttacgattccttat 45403166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 292
Target Start/End: Complemental strand, 22910319 - 22910191
Alignment:
Q  164 atcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatcaatt 263  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||| |||||||||  ||||| ||||||||||  |||||||||||||||||||  |||    
T  22910319 atcccgacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtagaatcttaaaataggcaaaatccattgatt 22910220  T
Q  264 ttgattgcgattttacgatttcttataaa 292  Q
    ||||||||||||||| |||||||||||||    
T  22910219 ttgattgcgattttaagatttcttataaa 22910191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 27836593 - 27836451
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||| |  ||||| |||||||||||||| ||||||||  ||| |||||||||||| ||  ||||||||||||||||||||||||| ||||    
T  27836593 attgttgtcaaaattcaaacttagatcctaaaattcaggattttgcggttttattcaccttcaacaactgaaatccatagtagaattctaaaataagcaa 27836494  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||| |||||||||||||| | ||||||| ||||||||||||||    
T  27836493 aattcatcaattttgattacaattttacaatttcttataaact 27836451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 153 - 292
Target Start/End: Complemental strand, 29384444 - 29384306
Alignment:
Q  153 ttgttgtcaaaatcccgacttaaatcctaaaat-tcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||| |  |||||||||||||| | ||| ||||||||||||||||||||||||||||  |||||||||||| ||| | |||||||||||    
T  29384444 ttgttgtcaaaatccaggtttaaatcctaaaatcttaga-ttttgcgactttcttcaccttcaacgactcaaatccatagtataatccaaaaataggcaa 29384346  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaa 292  Q
    ||| |||| | ||||||||||||||||||||||||||||||    
T  29384345 aattcatcga-tttgattgcgattttacgatttcttataaa 29384306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 191 - 294
Target Start/End: Original strand, 6810861 - 6810963
Alignment:
Q  191 attttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| |||| ||||||||| ||||||||||||||| ||||    
T  6810861 attttgcgactttcttcaccttcaacgactcaaatccatagtagaattttaaaataggcaaaat-catcgattttgattacgattttacgatttcatata 6810959  T
Q  291 aact 294  Q
    ||||    
T  6810960 aact 6810963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 23142224 - 23142315
Alignment:
Q  201 tttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatcaattttgattgcgattttacgatttcttataaa 292  Q
    |||||||| ||||||||||  |||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  23142224 tttcttcaacttcaacgactgaaatccatagtagaatcctaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaa 23142315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 7489409 - 7489272
Alignment:
Q  156 ttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattc----taaaataggcaa 251  Q
    ||||||||||||| | ||||||| |||||| |||||||||||   |||||||||||||||||||  |||||| |||||||||||    |||||||| |||    
T  7489409 ttgtcaaaatccccaattaaatcgtaaaatacagaattttgc---tttcttcaccttcaacgactaaaatccgtagtagaattctaaataaaatagacaa 7489313  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaa 292  Q
    |||  ||| ||||||||||| |||||| |||||||||||||    
T  7489312 aatttatcgattttgattgcaattttatgatttcttataaa 7489272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 477176 - 477101
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatcc 227  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||| |||||||||||||||||| ||| |||||||    
T  477176 attgttgtcaaaatcctgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaatgacttaaatcc 477101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 15231733 - 15231862
Alignment:
Q  161 aaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatccatca 260  Q
    |||||| ||| |||||||||||| || |  |||||||||  ||||||||||||||||||  |||| |||| || |||  |||||||||||||||||| ||    
T  15231733 aaaatctcgatttaaatcctaaactttaagattttgcgatgttcttcaccttcaacgactgaaattcatactaaaatcttaaaataggcaaaatccaaca 15231832  T
Q  261 attttgattgcgattttacgatttcttata 290  Q
      ||||||||||||||||| |||| |||||    
T  15231833 tatttgattgcgattttacaattttttata 15231862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 6292467 - 6292332
Alignment:
Q  156 ttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatc 255  Q
    |||| ||||| |||||||||||| ||||||| |  |||||| |||||| |||| ||| ||||||  ||| |||||||| |||||||||||| | |||||     
T  6292467 ttgttaaaataccgacttaaatcttaaaatttaagattttgtgacttttttcatctttaacgactcaaacccatagtataattctaaaataagaaaaatt 6292368  T
Q  256 catcaattttgattgcgattttacgatttcttataa 291  Q
    || | |||||||||||| | |||| |||| ||||||    
T  6292367 caacgattttgattgcggtcttacaatttattataa 6292332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 9212296 - 9212242
Alignment:
Q  240 taaaataggcaaaatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||||||||| |||||||||| |||||||||||||||||| |||||||||||||||    
T  9212296 taaaataggaaaaatccatcgattttgattgcgattttaagatttcttataaact 9212242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 254
Target Start/End: Complemental strand, 15761568 - 15761466
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||| |||||||||||||||| | ||| |||||| || ||| || ||||||||||||  |||| ||||| | ||| | |||||||||||    
T  15761568 attgttgtcaaaatctcgacttaaatcctaaactccaggattttgtgagtttatttaccttcaacgactcaaattcatagcaaaatcccaaaataggcaa 15761469  T
Q  252 aat 254  Q
    |||    
T  15761468 aat 15761466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 199
Target Start/End: Original strand, 23136353 - 23136396
Alignment:
Q  156 ttgtcaaaatcccgacttaaatcctaaaattcagaattttgcga 199  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  23136353 ttgtcaaaatcccgacttaaatcctaaaattcaggattttgcga 23136396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 24056697 - 24056618
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatag 231  Q
    |||||| ||||||||  ||||||||||||||||| ||| ||||||||||||| ||||| || ||||||  ||||||||||    
T  24056697 attgttatcaaaatcttgacttaaatcctaaaatccaggattttgcgactttattcacatttaacgactcaaatccatag 24056618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 29384240 - 29384200
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  29384240 aaaatccatcgattttgattgcgattttacgatttcttata 29384200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 32424402 - 32424470
Alignment:
Q  222 aaatccatagtagaattctaaaataggcaaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||| ||||||||||| ||||||||| ||||||  ||  |||||||||||||||||||||||| |||||    
T  32424402 aaattcatagtagaatcctaaaatagacaaaatttatagattttgattgcgattttacgatttattata 32424470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 9036801 - 9036757
Alignment:
Q  153 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgc 197  Q
    |||||||||||| || ||||||||||||||||||||| |||||||    
T  9036801 ttgttgtcaaaaacctgacttaaatcctaaaattcaggattttgc 9036757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 17647198 - 17647238
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||||||||    
T  17647198 aaaatccatcgattttgattgcgattttacaatttcttata 17647238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 26879778 - 26879810
Alignment:
Q  252 aatccatcaattttgattgcgattttacgattt 284  Q
    |||||||||||||||||||||||||||||||||    
T  26879778 aatccatcaattttgattgcgattttacgattt 26879810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 30240296 - 30240264
Alignment:
Q  252 aatccatcaattttgattgcgattttacgattt 284  Q
    |||||||||||||||||||||||||||||||||    
T  30240296 aatccatcaattttgattgcgattttacgattt 30240264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 26574985 - 26574948
Alignment:
Q  245 taggcaaaatccatcaattttgattgcgattttacgat 282  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  26574985 taggtaaaatccttcaattttgattgcgattttacgat 26574948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 15761286 - 15761246
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| | ||||||||    
T  15761286 aaaatccatcgattttgattgcgattttactacttcttata 15761246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 23142379 - 23142415
Alignment:
Q  254 tccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  23142379 tccatcgattttgattgcgattttacaatttcttata 23142415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 7e-49; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 31238106 - 31237964
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||||||||||||||||||||  || ||||||| |||||||||||||||||||||  |||| |||||||||||  ||||||||| ||    
T  31238106 attgttgtcaaaatcccgacttaaatcctaaaatctaggattttgccactttcttcaccttcaacgactcaaattcatagtagaatcttaaaataggaaa 31238007  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  31238006 aatccatcgattttgattgcgattttacgatttcttataaact 31237964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 290
Target Start/End: Original strand, 1404783 - 1404921
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||||||||||||| |||||||| || |||||| |||||||||||||||||||||| ||||||||| ||||||| ||||| || ||||    
T  1404783 attgttgtcaaaatcccgacttaaattctaaaatttaggattttgtgactttcttcaccttcaacgacttaaatccattgtagaatcctaaactatgcaa 1404882  T
Q  252 aatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  1404883 aatccatcgattttgattgtgattttacgatttcttata 1404921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 152 - 281
Target Start/End: Complemental strand, 23863450 - 23863321
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| |||||||||  ||||||||||||||||   |||||||||||    
T  23863450 attgttgtcaaaatcccgacttaaattctaaaatcgagaattttgcgactttcttcactttcaacgactgaaatccatagtagaatctcaaaataggcaa 23863351  T
Q  252 aatccatcaattttgattgcgattttacga 281  Q
    |||||||| |||||| ||||||||||||||    
T  23863350 aatccatcgattttggttgcgattttacga 23863321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 31578007 - 31578146
Alignment:
Q  154 tgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaa 253  Q
    ||||||||||||||||||||||||  ||||||| |  ||||||||| ||||||||||||||||||  ||||||| ||||||||| |||||||| ||||||    
T  31578007 tgttgtcaaaatcccgacttaaatgttaaaatttaagattttgcgattttcttcaccttcaacgatttaaatcc-tagtagaatcctaaaataagcaaaa 31578105  T
Q  254 tccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  31578106 tccatcaattttgattgcaattttacgatttattataaact 31578146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 36429848 - 36429990
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||| |||||||||||| |||  || |||||||||||||||||||||||||||||  || | ||||| |||||   |||||||||||    
T  36429848 attgttgtcaaaatcccaacttaaatcctataatctaggattttgcgactttcttcaccttcaacgactcaagttcataggagaatctcaaaataggcaa 36429947  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  36429948 aatccatcgattttgattgcgattgtacgatttcttataaact 36429990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 153 - 293
Target Start/End: Complemental strand, 35566082 - 35565942
Alignment:
Q  153 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaa 252  Q
    |||||||||||||||| |||||||||  ||||||||| ||||||||||||||||||  ||||| |||  |||||||| ||||||| | ||||||||||||    
T  35566082 ttgttgtcaaaatcccaacttaaatcacaaaattcaggattttgcgactttcttcatattcaatgactcaaatccatggtagaatcccaaaataggcaaa 35565983  T
Q  253 atccatcaattttgattgcgattttacgatttcttataaac 293  Q
    ||||||| |||||||||||  ||||||||||||||||||||    
T  35565982 atccatcgattttgattgcagttttacgatttcttataaac 35565942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 30432419 - 30432561
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||| || |||||| |||||||  || ||||| ||||||||||| |||||||||||  ||||||||||||||||   ||||||| |||    
T  30432419 attgttgtcaaaatcctgatttaaattctaaaatctaggatttttcgactttcttcgccttcaacgactcaaatccatagtagaatctcaaaatagacaa 30432518  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||| ||||||||||| ||||||||||||||||||||||    
T  30432519 aatccatcgattttgattgcaattttacgatttcttataaact 30432561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 20063714 - 20063856
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||||||||||| |||||||| ||   |||||||  |||||||| |||||| ||| ||||||||||||||||| | |||||||||||    
T  20063714 attgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggcaa 20063813  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||| |||| ||||| |||||||||||||| |||||||| ||||    
T  20063814 aattcatcgattttaattgcgattttacgttttcttatgaact 20063856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 154 - 285
Target Start/End: Complemental strand, 25539353 - 25539222
Alignment:
Q  154 tgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaa 253  Q
    |||||| |||||||||| |||||||||||||||||  | ||||| | ||||||||||||||||||| ||||||||||| ||||| | |||||| ||||||    
T  25539353 tgttgttaaaatcccgatttaaatcctaaaattcaagaatttgcaattttcttcaccttcaacgacttaaatccataggagaatccgaaaataagcaaaa 25539254  T
Q  254 tccatcaattttgattgcgattttacgatttc 285  Q
    |||||| ||||||| |||||||| ||||||||    
T  25539253 tccatcgattttgactgcgatttaacgatttc 25539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 15588978 - 15588837
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||| ||||||||||||||||||| || |||||||||| |||||||| ||||||||||||||||| ||  |||| |||||||||||   ||||||| |||    
T  15588978 attgctgtcaaaatcccgacttaa-tcttaaaattcaggattttgcgtctttcttcaccttcaacaactcaaatacatagtagaatctcaaaatagacaa 15588880  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||| |||  |||| ||||||||||||||||||| ||||||||    
T  15588879 aatcaatcgttttttattgcgattttacgatttcatataaact 15588837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 150 - 278
Target Start/End: Original strand, 19491853 - 19491982
Alignment:
Q  150 taattgttgtcaaaatcccgacttaaatccta--aaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaatag 247  Q
    ||||||||||||||||| ||| ||||||||||  ||||  || |||||||||||||||||| ||| ||||||  |||||||||| ||||| | |||||||    
T  19491853 taattgttgtcaaaatctcgaattaaatcctataaaatctaggattttgcgactttcttcatcttaaacgactcaaatccatagcagaatcc-aaaatag 19491951  T
Q  248 gcaaaatccatcaattttgattgcgatttta 278  Q
    | |||||||||| ||||||||||||||||||    
T  19491952 gtaaaatccatcgattttgattgcgatttta 19491982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 1690891 - 1690785
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||  |||||||||||| ||||||| || |||||| |||||||||||||||| |||||  | |||||||||| ||| | |||||||||||    
T  1690891 attgttgtcaaaactccgacttaaatcttaaaatttaggattttgtgactttcttcaccttcgacgactcagatccatagtaaaatcccaaaataggcaa 1690792  T
Q  252 aatccat 258  Q
    || ||||    
T  1690791 aacccat 1690785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 254
Target Start/End: Original strand, 17995055 - 17995157
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||| ||||| |||||||||| |||||||| ||||||||||||| ||| |||||| ||||||||  |||| | ||| | ||||| |||||||||||    
T  17995055 attgttgttaaaattccgacttaaaacctaaaatccagaattttgcgattttattcaccatcaacgactcaaattcgtagcataattccaaaataggcaa 17995154  T
Q  252 aat 254  Q
    |||    
T  17995155 aat 17995157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 16766710 - 16766809
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||   |||||||||| ||||||| || ||||| ||| ||| ||||||||||||||   |||||||||| ||||| |||||||| ||||    
T  16766710 attgttgtcaaaattttgacttaaatcttaaaatttaggattttacgattttattcaccttcaacgaatcaaatccatagcagaatcctaaaataagcaa 16766809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 31023262 - 31023325
Alignment:
Q  191 attttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaat 254  Q
    ||||||||||||| ||||| |||||||||  |||| ||||||||||| ||||||||||||||||    
T  31023262 attttgcgactttattcactttcaacgactcaaattcatagtagaatcctaaaataggcaaaat 31023325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 1690768 - 1690715
Alignment:
Q  241 aaaataggcaaaatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    ||||||||| ||| ||||  ||||||||||||||||||||||||||||||||||    
T  1690768 aaaataggcgaaacccattgattttgattgcgattttacgatttcttataaact 1690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 15266082 - 15266187
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||  || |||||||||||||||||| ||||||  ||||| |||| |||||| ||   ||||||||  || ||||| |||||||| ||    
T  15266082 attgttgtcaaaatcatgatttaaatcctaaaattcaggattttgtaactttattcatcttcaatgattcaaatccatgttataattccaaaataggaaa 15266181  T
Q  252 aatcca 257  Q
    ||||||    
T  15266182 aatcca 15266187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 13502601 - 13502561
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  13502601 aaaatccatcgattttgattgcgattttacgatttcttata 13502561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 15516687 - 15516624
Alignment:
Q  153 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaac 216  Q
    ||||||| |||||| | ||||||||| ||| |||||| ||||||||||||| ||||||||||||    
T  15516687 ttgttgttaaaatcgcaacttaaatcttaatattcagcattttgcgactttattcaccttcaac 15516624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 19245153 - 19245204
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgacttt 203  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| |||||||    
T  19245153 attgttgtcaaaatcccgacttaaattttaaaattcaggattttacgacttt 19245204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 290
Target Start/End: Original strand, 27406993 - 27407032
Alignment:
Q  251 aaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  27406993 aaatccatcaattttgattgcgattttatgatttcttata 27407032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 255
Target Start/End: Complemental strand, 5395777 - 5395674
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||   ||| |||||| ||||||  || ||||||||||||| |||| ||| || |||  |||||||||| |||||   |||||||||||    
T  5395777 attgttgtcaaaattttgacctaaatcataaaatataggattttgcgactttattcatcttaaatgactcaaatccatagcagaatctcaaaataggcaa 5395678  T
Q  252 aatc 255  Q
    ||||    
T  5395677 aatc 5395674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 13503162 - 13503067
Alignment:
Q  162 aaatcccgacttaaatcctaaaattc-agaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatcc 256  Q
    ||||| ||||||||||| ||||| || || |||||||||  || ||||| ||||||| |  |||||||||  | ||||||||||||||||||||||    
T  13503162 aaatctcgacttaaatcttaaaaatctaggattttgcgatcttattcactttcaacggctcaaatccataacaaaattctaaaataggcaaaatcc 13503067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 34841584 - 34841659
Alignment:
Q  180 taaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaaaatc 255  Q
    ||||||| || ||| ||||||||| |||||||||||||||  |||||||||| ||||| | |||| | ||||||||    
T  34841584 taaaatttaggattctgcgactttattcaccttcaacgactcaaatccataggagaataccaaaacatgcaaaatc 34841659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 186
Target Start/End: Original strand, 15627659 - 15627689
Alignment:
Q  156 ttgtcaaaatcccgacttaaatcctaaaatt 186  Q
    |||||||||||||||||||||||||||||||    
T  15627659 ttgtcaaaatcccgacttaaatcctaaaatt 15627689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 290
Target Start/End: Original strand, 16766997 - 16767026
Alignment:
Q  261 attttgattgcgattttacgatttcttata 290  Q
    ||||||||||||||||||||||||||||||    
T  16766997 attttgattgcgattttacgatttcttata 16767026  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 15588782 - 15588742
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||  ||||||||||    
T  15588782 aaaatccatcgattttgattgcgattttataatttcttata 15588742  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 19519577 - 19519609
Alignment:
Q  252 aatccatcaattttgattgcgattttacgattt 284  Q
    |||| ||||||||||||||||||||||||||||    
T  19519577 aatctatcaattttgattgcgattttacgattt 19519609  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 24473336 - 24473400
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaac 216  Q
    ||||||||| |||||  ||||||| ||| ||||||||| ||||||||| |||  |||||||||||    
T  24473336 attgttgtcgaaatcgtgacttaagtcccaaaattcaggattttgcgattttactcaccttcaac 24473400  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 30433016 - 30433056
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  30433016 aaaatccatctattttgattgcgattttacaatttcctata 30433056  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 34841784 - 34841816
Alignment:
Q  252 aatccatcaattttgattgcgattttacgattt 284  Q
    |||||||| ||||||||||||||||||||||||    
T  34841784 aatccatcgattttgattgcgattttacgattt 34841816  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 35565885 - 35565845
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  35565885 aaaatccatcgattttgattgtgattttatgatttcttata 35565845  T

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Target: scaffold0417 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 152 - 293
Target Start/End: Complemental strand, 7584 - 7443
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||| | ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||    
T  7584 attgttgttagaatcccgacttaaattctaaaattcaggattttgcgactttctttaccttcaacgaacaaaatccatagtagaatcctaaaataggcaa 7485  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaac 293  Q
    ||| |||| ||||| |||||||||||||||||||||||||||    
T  7484 aattcatcgattttaattgcgattttacgatttcttataaac 7443  T

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Target: scaffold0186 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 8443 - 8585
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    ||||||||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||||||||| |||||| || ||||||| | |||||| ||||    
T  8443 attgttgtcaaaatccctacttaaatcctaaaatccacgattttgcgactttcttcaccttcaacgacttaaatctattgtagaatcccaaaataagcaa 8542  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaact 294  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  8543 aatccattgattttgattgcgattttacgatttcttataaact 8585  T

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Target: scaffold0186; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 8642 - 8682
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  8642 aaaatccatcgattttgattgcgattttacaatttcctata 8682  T

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Target: scaffold0042 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 152 - 292
Target Start/End: Complemental strand, 93833 - 93695
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  | |||||||||| ||||| ||  |||||||||| ||||||||||||||||| |    
T  93833 attgttgtcaaaatcccgacttaaatcctaaaatccagaattttg--attttcttcaccctcaacaactcaaatccatagaagaattctaaaataggcga 93736  T
Q  252 aatccatcaattttgattgcgattttacgatttcttataaa 292  Q
    |||||||| ||||||||||||||||||||||||||| ||||    
T  93735 aatccatcgattttgattgcgattttacgatttcttttaaa 93695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 93633 - 93593
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  93633 aaaatccatcgattttgattgcgattttacgatttattata 93593  T

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Target: scaffold0510 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 164 - 290
Target Start/End: Complemental strand, 218 - 91
Alignment:
Q  164 atcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggc-aaaatccatcaat 262  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||||||||||| |||||||||| ||    
T  218 atcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcgaaaatccatcgat 119  T
Q  263 tttgattgcgattttacgatttcttata 290  Q
    |||||||| |||||||| ||||||||||    
T  118 tttgattgagattttacaatttcttata 91  T

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Target: scaffold0036 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 256
Target Start/End: Complemental strand, 37295 - 37191
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||| |||||||||||  |||||||||||||||||| | ||| |||||||||||| ||  |||||||||| |||||  ||||||||| ||    
T  37295 attgttgtcaaaatgccgacttaaattttaaaattcagaattttgcaattttattcaccttcaacaactcaaatccatagcagaatcttaaaataggtaa 37196  T
Q  252 aatcc 256  Q
    |||||    
T  37195 aatcc 37191  T

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Target: scaffold0048 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 48917 - 48839
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccata 230  Q
    |||||||| ||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||  |||||||||    
T  48917 attgttgtgaaaattccgacttaaatcctaaaatctagaattttgcaactttattcaccttcaacgactcaaatccata 48839  T

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Target: scaffold0115 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 35188 - 35103
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaat 237  Q
    ||||||||||||||| |||||||||| |||||||||| |||||||  ||||| |||||||| ||||||  |||| ||| |||||||    
T  35188 attgttgtcaaaatctcgacttaaattctaaaattcataattttggaactttattcacctttaacgactcaaattcattgtagaat 35103  T

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Target: scaffold0603 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 252
Target Start/End: Complemental strand, 9149 - 9049
Alignment:
Q  152 attgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaattctaaaataggcaa 251  Q
    |||||||||||||||| || ||||||  ||||||  || |||||| || ||| |||||||||||||||  |||||||||| | ||| || ||||||||||    
T  9149 attgttgtcaaaatcctgatttaaattttaaaatgtaggattttgtgattttattcaccttcaacgactcaaatccatagcaaaatccttaaataggcaa 9050  T
Q  252 a 252  Q
    |    
T  9049 a 9049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 8887 - 8847
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| | ||||||||    
T  8887 aaaatccatcgattttgattgcgattttacaagttcttata 8847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 56353 - 56313
Alignment:
Q  250 aaaatccatcaattttgattgcgattttacgatttcttata 290  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  56353 aaaatccatcgattttgattgcgattttacaatttcctata 56313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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