View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7732_high_3 (Length: 495)
Name: NF7732_high_3
Description: NF7732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7732_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 398; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 7 - 477
Target Start/End: Complemental strand, 24326258 - 24325798
Alignment:
| Q |
7 |
tatattattctttattgatgaatatgacttcatcatgagacagtcctagtatcatgtaattgtaaatgaaaatcatttcacaaaataaatgataaattta |
106 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24326258 |
tatattattctttattgatgaatatgacttcatcatgagacagtgctagtatcatgtaattgtaaatgaaaatcatttcacaaaataaatgataaattta |
24326159 |
T |
|
| Q |
107 |
tatcttacagaatttgtactatagtactaggtatcatgcacgcatgagtaaactaattttgtgacgtcaaaacctgtcttgaagggtcctttctctctgg |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24326158 |
tatcttacagaatttgtactatagtactaggtatcatgcacgcatgagtaaactaattttgtgacgtcaaaacctgtcttgaagggtcctttctctctgg |
24326059 |
T |
|
| Q |
207 |
tcacattcgtgtacaactttcattggttacataaaataactgtccacgcatgctagtagtgnnnnnnnnnnnnnnagaagaagaggtgaatattaatgag |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
24326058 |
tcacattcgtgtacaactttcattggttacataaaataactgtccacgcatgctagtagt-----------attaagaagaagaggtgaatattaatgag |
24325970 |
T |
|
| Q |
307 |
aacacgtgaaatataactgaaataaaatgaaagaggttgtaatattatgcatggattttgtgttgaaccc-aacctgaatttaaacaatatcatgaagaa |
405 |
Q |
| |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |
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| T |
24325969 |
aacacgtgaaatataactgaaataaaattaaagaggttgtaatattatgcatggattttgtgttgaacccaaacatgaatttaaacaatatcatgaagaa |
24325870 |
T |
|
| Q |
406 |
tcaaaattgagcagtttgtgttggtggaccctagcaaaaatatgaatggcatggatcagagaatggcagggt |
477 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
24325869 |
tcaaaattgagcagtttgtgttggtggaccccagcaaaaatatgaatggcatggatcagagaatggcagggt |
24325798 |
T |
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