View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7732_low_10 (Length: 275)
Name: NF7732_low_10
Description: NF7732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7732_low_10 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 16 - 275
Target Start/End: Original strand, 7904614 - 7904873
Alignment:
| Q |
16 |
acccctagaaacacataacccatgcgcctcgcgcatgagagcagctctcttgcaataacaaatacataacaaaactgaattgcttnnnnnnnntcaccat |
115 |
Q |
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| T |
7904614 |
acccctagaaacacataacccatgcgcctcgcgcatgagagcagctctcttgcaataacaaatacataacaaaactgaattgcttaaaaaaaatcaccat |
7904713 |
T |
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| Q |
116 |
ttttatccaaattttcaataggtacatttatttgatgatgctaatggagaacaaagtatgaaatacagctaagctaactaaaccaagatcctagggtcat |
215 |
Q |
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| T |
7904714 |
ttttatccaaattttcaataggtacatttatttgatgatgctaatggagaacaaagtatgaaatacagctaagctaagtaaaccaagatcctagggtcat |
7904813 |
T |
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| Q |
216 |
ttcctaatgactagaaatatacacaaatttcactctagagatgaatcctaaatgaaaaag |
275 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
7904814 |
ttcctaatgactagaaatatacacaaatttcactctagagatgaatcctaaatgagaaag |
7904873 |
T |
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