View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7733_low_5 (Length: 336)

Name: NF7733_low_5
Description: NF7733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7733_low_5
NF7733_low_5
[»] chr1 (44 HSPs)
chr1 (21-322)||(9528641-9528947)
chr1 (127-316)||(9781767-9781957)
chr1 (127-319)||(29168072-29168265)
chr1 (127-315)||(29861922-29862111)
chr1 (127-320)||(34096352-34096546)
chr1 (127-316)||(10763779-10763968)
chr1 (149-314)||(10822541-10822707)
chr1 (127-236)||(24590008-24590117)
chr1 (247-307)||(14334539-14334599)
chr1 (240-316)||(34432218-34432294)
chr1 (243-307)||(43190021-43190085)
chr1 (139-236)||(2472807-2472904)
chr1 (127-236)||(41675874-41675982)
chr1 (127-236)||(24851599-24851704)
chr1 (243-307)||(24851734-24851798)
chr1 (243-307)||(31653092-31653156)
chr1 (243-319)||(47654928-47655004)
chr1 (127-236)||(33039737-33039844)
chr1 (154-236)||(36551536-36551618)
chr1 (247-316)||(14167315-14167384)
chr1 (243-304)||(25257382-25257442)
chr1 (243-304)||(28658684-28658744)
chr1 (243-304)||(37104416-37104476)
chr1 (127-236)||(38218508-38218617)
chr1 (127-236)||(47654789-47654898)
chr1 (243-307)||(13012666-13012730)
chr1 (238-312)||(36551643-36551717)
chr1 (265-307)||(37922478-37922520)
chr1 (243-304)||(5984952-5985012)
chr1 (243-304)||(30324485-30324545)
chr1 (243-312)||(32380865-32380934)
chr1 (243-304)||(36363336-36363396)
chr1 (243-304)||(36367460-36367520)
chr1 (238-308)||(24589912-24589982)
chr1 (243-304)||(28948489-28948549)
chr1 (129-180)||(3708219-3708270)
chr1 (205-236)||(34432328-34432359)
chr1 (243-284)||(3708099-3708140)
chr1 (243-304)||(6916144-6916204)
chr1 (139-172)||(34432400-34432433)
chr1 (243-307)||(37346631-37346696)
chr1 (243-304)||(38331215-38331275)
chr1 (127-180)||(48715165-48715218)
chr1 (243-283)||(3427622-3427662)
[»] chr7 (53 HSPs)
chr7 (127-319)||(554690-554883)
chr7 (127-316)||(21409512-21409702)
chr7 (127-316)||(23969929-23970119)
chr7 (127-298)||(24956373-24956543)
chr7 (162-319)||(48153702-48153860)
chr7 (127-316)||(26973175-26973369)
chr7 (127-236)||(40041500-40041609)
chr7 (210-307)||(36413575-36413672)
chr7 (127-236)||(36757900-36758009)
chr7 (127-236)||(36767424-36767533)
chr7 (127-236)||(1400152-1400261)
chr7 (127-236)||(44960019-44960128)
chr7 (243-307)||(19820788-19820852)
chr7 (243-319)||(23078887-23078963)
chr7 (243-307)||(8029073-8029137)
chr7 (243-307)||(16564031-16564095)
chr7 (243-307)||(16601567-16601631)
chr7 (137-236)||(15878308-15878407)
chr7 (154-236)||(36763680-36763762)
chr7 (243-307)||(1042858-1042922)
chr7 (243-307)||(26773371-26773435)
chr7 (243-319)||(33454331-33454407)
chr7 (137-236)||(23078993-23079092)
chr7 (238-307)||(1400058-1400127)
chr7 (127-236)||(44269847-44269956)
chr7 (243-304)||(47238031-47238092)
chr7 (243-319)||(9250089-9250165)
chr7 (243-319)||(9283639-9283715)
chr7 (243-319)||(15878202-15878278)
chr7 (128-180)||(21179959-21180011)
chr7 (243-319)||(25969768-25969844)
chr7 (247-307)||(44269985-44270045)
chr7 (244-312)||(35160124-35160196)
chr7 (243-312)||(38064931-38065001)
chr7 (243-304)||(16851080-16851140)
chr7 (127-172)||(19820881-19820926)
chr7 (243-304)||(48163705-48163765)
chr7 (243-307)||(19510889-19510953)
chr7 (243-302)||(11830465-11830523)
chr7 (245-307)||(4291937-4291998)
chr7 (17-115)||(1043081-1043183)
chr7 (243-304)||(27354218-27354278)
chr7 (243-304)||(27555127-27555187)
chr7 (127-236)||(33454192-33454301)
chr7 (243-312)||(36757797-36757870)
chr7 (243-312)||(36763576-36763649)
chr7 (243-312)||(36767321-36767394)
chr7 (17-59)||(16850789-16850831)
chr7 (139-169)||(18113959-18113989)
chr7 (246-304)||(36661244-36661301)
chr7 (139-172)||(23311787-23311820)
chr7 (243-304)||(27397399-27397459)
chr7 (127-236)||(35159987-35160095)
[»] chr8 (46 HSPs)
chr8 (127-316)||(3892089-3892279)
chr8 (128-316)||(37372386-37372567)
chr8 (127-236)||(32425046-32425155)
chr8 (127-236)||(7411727-7411836)
chr8 (210-307)||(5818143-5818241)
chr8 (243-307)||(6028867-6028931)
chr8 (243-307)||(32877832-32877896)
chr8 (127-236)||(27968230-27968339)
chr8 (243-320)||(32844-32921)
chr8 (131-236)||(38388796-38388901)
chr8 (243-307)||(19436629-19436693)
chr8 (243-307)||(19572778-19572842)
chr8 (243-315)||(27108977-27109049)
chr8 (243-307)||(19947652-19947716)
chr8 (127-236)||(28025216-28025325)
chr8 (243-304)||(12579818-12579878)
chr8 (127-236)||(20182498-20182607)
chr8 (243-304)||(32760131-32760191)
chr8 (243-304)||(36484200-36484260)
chr8 (247-307)||(20182635-20182695)
chr8 (243-302)||(42949446-42949505)
chr8 (262-312)||(27886460-27886510)
chr8 (262-312)||(27945118-27945168)
chr8 (262-312)||(28025361-28025411)
chr8 (243-312)||(8170891-8170960)
chr8 (243-304)||(22201100-22201160)
chr8 (243-304)||(28875847-28875907)
chr8 (243-312)||(29355882-29355951)
chr8 (251-319)||(38388939-38389007)
chr8 (243-307)||(40412807-40412871)
chr8 (243-302)||(37669345-37669403)
chr8 (155-236)||(27886343-27886424)
chr8 (155-236)||(27945001-27945082)
chr8 (262-312)||(27968375-27968425)
chr8 (243-304)||(5540198-5540258)
chr8 (243-304)||(32638496-32638556)
chr8 (18-115)||(37372266-37372367)
chr8 (244-307)||(7411867-7411930)
chr8 (257-315)||(28737776-28737834)
chr8 (138-236)||(29355760-29355858)
chr8 (243-304)||(4246705-4246765)
chr8 (243-304)||(25022531-25022592)
chr8 (243-304)||(34900651-34900711)
chr8 (251-304)||(45216502-45216554)
chr8 (18-115)||(32424928-32425029)
chr8 (243-283)||(43771006-43771046)
[»] chr4 (45 HSPs)
chr4 (134-319)||(51858927-51859113)
chr4 (127-319)||(40694195-40694388)
chr4 (127-316)||(1177102-1177292)
chr4 (127-316)||(36511736-36511926)
chr4 (127-316)||(31946030-31946219)
chr4 (203-316)||(47607302-47607416)
chr4 (136-318)||(51674923-51675106)
chr4 (127-236)||(36943794-36943903)
chr4 (127-236)||(46431817-46431926)
chr4 (127-236)||(3109189-3109298)
chr4 (127-236)||(24793615-24793724)
chr4 (128-232)||(42630372-42630476)
chr4 (127-319)||(2586461-2586656)
chr4 (127-236)||(754295-754404)
chr4 (140-236)||(49470419-49470514)
chr4 (210-320)||(14614712-14614823)
chr4 (243-307)||(5835207-5835271)
chr4 (243-319)||(24793509-24793585)
chr4 (243-307)||(28377274-28377338)
chr4 (243-319)||(42630256-42630332)
chr4 (149-236)||(44521930-44522017)
chr4 (238-312)||(44521831-44521905)
chr4 (238-307)||(3109095-3109164)
chr4 (127-236)||(17892373-17892482)
chr4 (238-319)||(36943928-36944009)
chr4 (243-304)||(41146382-41146442)
chr4 (243-307)||(39957952-39958016)
chr4 (243-319)||(52721618-52721694)
chr4 (243-319)||(55900926-55901002)
chr4 (246-304)||(53323120-53323177)
chr4 (248-316)||(258872-258941)
chr4 (238-319)||(17892507-17892588)
chr4 (243-307)||(24784636-24784700)
chr4 (243-307)||(24823566-24823630)
chr4 (130-180)||(726496-726546)
chr4 (243-304)||(3402854-3402914)
chr4 (251-304)||(31227126-31227178)
chr4 (251-304)||(38492042-38492094)
chr4 (131-179)||(47607242-47607290)
chr4 (127-197)||(37992455-37992525)
chr4 (243-304)||(8063377-8063437)
chr4 (243-300)||(14795785-14795841)
chr4 (262-307)||(49470559-49470604)
chr4 (255-304)||(52572975-52573023)
chr4 (19-51)||(31946283-31946315)
[»] chr5 (47 HSPs)
chr5 (127-316)||(26716398-26716588)
chr5 (127-316)||(26986138-26986328)
chr5 (127-316)||(43357562-43357752)
chr5 (128-319)||(3934587-3934779)
chr5 (127-316)||(1795518-1795708)
chr5 (127-316)||(25749731-25749921)
chr5 (127-307)||(42365918-42366100)
chr5 (127-316)||(27938284-27938474)
chr5 (210-316)||(14836540-14836647)
chr5 (210-319)||(7629254-7629364)
chr5 (127-236)||(5612326-5612435)
chr5 (130-236)||(17138138-17138244)
chr5 (140-282)||(35746158-35746300)
chr5 (17-235)||(26691622-26691849)
chr5 (17-235)||(26961354-26961581)
chr5 (127-236)||(22737964-22738072)
chr5 (243-319)||(5722241-5722317)
chr5 (243-307)||(22738101-22738165)
chr5 (246-312)||(3701331-3701397)
chr5 (243-307)||(10657222-10657286)
chr5 (243-307)||(26691881-26691945)
chr5 (243-307)||(26961613-26961677)
chr5 (243-319)||(1921024-1921101)
chr5 (127-236)||(11694328-11694436)
chr5 (251-312)||(21251734-21251795)
chr5 (243-312)||(27085613-27085682)
chr5 (127-235)||(18001851-18001958)
chr5 (243-319)||(30777188-30777264)
chr5 (243-312)||(11907555-11907624)
chr5 (243-312)||(15066455-15066524)
chr5 (139-244)||(41233447-41233549)
chr5 (243-307)||(17138044-17138108)
chr5 (238-312)||(30284392-30284464)
chr5 (17-75)||(32624883-32624941)
chr5 (155-236)||(5722130-5722211)
chr5 (243-304)||(39690011-39690071)
chr5 (243-283)||(1639090-1639130)
chr5 (238-282)||(18001781-18001825)
chr5 (243-307)||(6242820-6242886)
chr5 (243-289)||(5612249-5612295)
chr5 (17-75)||(9792325-9792383)
chr5 (262-307)||(5985755-5985800)
chr5 (243-304)||(9793074-9793134)
chr5 (243-284)||(34032626-34032667)
chr5 (16-48)||(5721992-5722024)
chr5 (262-302)||(9729431-9729471)
chr5 (251-283)||(12852896-12852928)
[»] chr2 (43 HSPs)
chr2 (127-313)||(44156723-44156910)
chr2 (127-316)||(14824264-14824454)
chr2 (140-316)||(5588176-5588353)
chr2 (127-316)||(1005637-1005827)
chr2 (168-316)||(4355478-4355627)
chr2 (127-316)||(4561914-4562104)
chr2 (127-319)||(3563965-3564158)
chr2 (130-316)||(24585662-24585851)
chr2 (127-307)||(8482729-8482910)
chr2 (127-316)||(28746464-28746649)
chr2 (144-307)||(40431834-40431997)
chr2 (127-236)||(34146305-34146414)
chr2 (138-315)||(1776241-1776418)
chr2 (127-236)||(35342443-35342552)
chr2 (127-236)||(14217034-14217143)
chr2 (127-236)||(21104607-21104716)
chr2 (127-236)||(2319400-2319509)
chr2 (243-319)||(31235964-31236040)
chr2 (243-302)||(5371339-5371398)
chr2 (243-309)||(2319539-2319605)
chr2 (127-236)||(31236070-31236179)
chr2 (243-307)||(12819579-12819643)
chr2 (254-307)||(20537114-20537167)
chr2 (128-236)||(12206150-12206258)
chr2 (243-319)||(35342581-35342657)
chr2 (243-307)||(45158966-45159030)
chr2 (128-235)||(3545465-3545572)
chr2 (262-319)||(3545359-3545416)
chr2 (243-304)||(6496953-6497013)
chr2 (246-307)||(18301362-18301423)
chr2 (243-304)||(22485045-22485105)
chr2 (243-304)||(40308118-40308178)
chr2 (28-115)||(18300989-18301080)
chr2 (238-299)||(21104742-21104803)
chr2 (127-176)||(35996767-35996816)
chr2 (243-307)||(34146444-34146508)
chr2 (28-59)||(4561805-4561836)
chr2 (17-115)||(1776446-1776548)
chr2 (17-115)||(44156603-44156705)
chr2 (19-75)||(4355333-4355389)
chr2 (243-283)||(6124949-6124989)
chr2 (243-283)||(7807157-7807197)
chr2 (17-65)||(45159362-45159410)
[»] chr6 (29 HSPs)
chr6 (127-316)||(19128278-19128468)
chr6 (127-316)||(234434-234624)
chr6 (149-319)||(27084121-27084292)
chr6 (130-236)||(10894403-10894509)
chr6 (243-312)||(10894304-10894373)
chr6 (128-236)||(7255047-7255155)
chr6 (243-307)||(31740492-31740556)
chr6 (127-235)||(13607670-13607778)
chr6 (127-236)||(6707925-6708034)
chr6 (251-312)||(22988911-22988972)
chr6 (251-312)||(23799424-23799485)
chr6 (127-196)||(31079727-31079796)
chr6 (243-319)||(3212833-3212909)
chr6 (243-307)||(32130335-32130399)
chr6 (137-236)||(13045260-13045359)
chr6 (243-312)||(7255185-7255255)
chr6 (243-304)||(7188059-7188119)
chr6 (243-312)||(13061159-13061228)
chr6 (243-304)||(31195631-31195691)
chr6 (251-306)||(13045172-13045227)
chr6 (17-59)||(3212483-3212525)
chr6 (127-197)||(26327279-26327349)
chr6 (243-312)||(26327559-26327628)
chr6 (139-235)||(13061259-13061355)
chr6 (243-307)||(13607568-13607632)
chr6 (243-307)||(32018360-32018424)
chr6 (243-304)||(1036096-1036156)
chr6 (254-307)||(6707830-6707883)
chr6 (246-302)||(11105554-11105610)
[»] chr3 (62 HSPs)
chr3 (149-307)||(42229811-42229970)
chr3 (127-316)||(22289524-22289714)
chr3 (131-319)||(2122838-2123027)
chr3 (127-282)||(41741909-41742065)
chr3 (128-316)||(19349407-19349596)
chr3 (139-312)||(29915929-29916103)
chr3 (139-312)||(29965082-29965256)
chr3 (127-316)||(45347423-45347610)
chr3 (127-236)||(21157613-21157722)
chr3 (127-236)||(25700886-25700995)
chr3 (223-316)||(39664636-39664730)
chr3 (127-236)||(7899602-7899711)
chr3 (127-236)||(47642131-47642240)
chr3 (128-236)||(30787445-30787553)
chr3 (127-236)||(28968635-28968745)
chr3 (137-236)||(45057185-45057284)
chr3 (127-235)||(55268901-55269009)
chr3 (127-236)||(6134266-6134375)
chr3 (127-236)||(19878986-19879096)
chr3 (243-307)||(22311107-22311171)
chr3 (243-307)||(30787351-30787415)
chr3 (243-310)||(13352982-13353049)
chr3 (130-236)||(19421544-19421650)
chr3 (127-236)||(38888970-38889079)
chr3 (243-307)||(28882356-28882420)
chr3 (243-307)||(35390127-35390191)
chr3 (243-310)||(20509943-20510010)
chr3 (127-260)||(13748307-13748441)
chr3 (243-312)||(7899504-7899573)
chr3 (127-236)||(20510040-20510149)
chr3 (243-304)||(22610557-22610617)
chr3 (243-304)||(25936359-25936419)
chr3 (251-312)||(48333212-48333273)
chr3 (251-307)||(48334155-48334211)
chr3 (243-307)||(52684591-52684655)
chr3 (19-115)||(983202-983302)
chr3 (243-302)||(19421680-19421739)
chr3 (128-182)||(39664082-39664136)
chr3 (243-304)||(37996571-37996631)
chr3 (243-312)||(45057086-45057155)
chr3 (133-236)||(13353079-13353182)
chr3 (243-307)||(21006153-21006217)
chr3 (243-307)||(50287023-50287087)
chr3 (243-307)||(52121539-52121603)
chr3 (262-312)||(25701046-25701096)
chr3 (243-304)||(7328002-7328062)
chr3 (251-312)||(28548296-28548357)
chr3 (238-307)||(28968770-28968839)
chr3 (243-304)||(45532343-45532403)
chr3 (238-307)||(47642265-47642334)
chr3 (243-283)||(1528811-1528851)
chr3 (243-289)||(21157536-21157582)
chr3 (139-172)||(6134399-6134432)
chr3 (251-312)||(19878887-19878948)
chr3 (139-172)||(22289738-22289771)
chr3 (137-178)||(42229740-42229781)
chr3 (243-304)||(48123602-48123662)
chr3 (127-172)||(48333136-48333181)
chr3 (127-172)||(48334079-48334124)
chr3 (251-304)||(52505104-52505156)
chr3 (243-283)||(1678981-1679021)
chr3 (16-48)||(25937145-25937177)
[»] scaffold0005 (2 HSPs)
scaffold0005 (210-320)||(202553-202664)
scaffold0005 (243-300)||(43890-43946)
[»] scaffold0285 (1 HSPs)
scaffold0285 (127-191)||(13374-13438)
[»] scaffold0112 (1 HSPs)
scaffold0112 (243-302)||(41367-41425)
[»] scaffold0250 (1 HSPs)
scaffold0250 (243-307)||(5908-5972)


Alignment Details
Target: chr1 (Bit Score: 145; Significance: 3e-76; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 21 - 322
Target Start/End: Complemental strand, 9528947 - 9528641
Alignment:
Q  21 atattttaaaatggatgacgtatcgtattccttgtgtattttgcattgatacctgtctgattc----cgatacgtatcgagagggtatccgaagattaan 116  Q
    |||||| |||||||||||||||| |||| |||||||||| |||||  ||||||||| |||| |    |||||||||||| ||  ||||| |||||||||     
T  9528947 atatttcaaaatggatgacgtattgtatcccttgtgtatcttgcaccgatacctgtttgatacttcccgatacgtatcgggatagtatctgaagattaat 9528848  T
Q  117 nnnnnnnnnnaaa-taattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaa 215  Q
              ||| |||||||| ||||||||| |||| |||| ||||||||||||||||||||| || |||||||||||||| |   ||||| |||||||    
T  9528847 tttttttttaaaaataattatctgatacttcccgatacgtattaggagagtatccgataattattctgcacagatacctgccccaatacttcttaattaa 9528748  T
Q  216 tgttaactaaaataacttaacgttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttat 315  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9528747 tgttaactaaaataacttaactttgagtatagtgcttcttttttggatcgatatagtatagcactaacgatgtttcttttggatatagtatagcacttat 9528648  T
Q  316 gatgtcc 322  Q
    |||||||    
T  9528647 gatgtcc 9528641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 9781767 - 9781957
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||  ||||||||| |   | |||| |||||| ||||| ||||    
T  9781767 aaataattatccgatacttcccgatacgtatcaggaaagtatccgataattatcctgcacctatacctgccccaataattcccaattaacgttaaataaa 9781866  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  ||||||| ||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  9781867 ataacttaactcttgagtacagtgcttcttttttggatcgatacagtatagcactaacaatgtttcttttggatatagtatagcacttatg 9781957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 127 - 319
Target Start/End: Original strand, 29168072 - 29168265
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| ||||||||| |||| |||| ||||||||| || ||||||||||| ||| ||||||| || |   |||||| ||||||| |||||||||    
T  29168072 aaataattatctgatacttcccgatacgtatgaggagagtacccaataattatcctgcactgatacctaccccaatacttcccaattaatattaactaaa 29168171  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    ||||||||||  ||||||||| ||||||||||||| ||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  29168172 ataacttaactattgagtataatgcttcttttttggatcaatatagtatagtactaacaatgtttcttttggatatagtatatcacttatgatg 29168265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 127 - 315
Target Start/End: Original strand, 29861922 - 29862111
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||  |||| ||||||||| ||||||||||||||||||| |||  ||||||| | |   | |||| |||||| ||||| ||||    
T  29861922 aaataattatccgatacttctcgatacgtatcaggaaagtatccgataattatcctgcacctatacctgtcccaataattcccaattaacgttaaataaa 29862021  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttat 315  Q
    ||||||||||  ||||||||||||||||||||||| || |||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  29862022 ataacttaactcttgagtatagtgcttcttttttggattgataaagtataccactaacaatgtttcttttggatatagtatatcacttat 29862111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 127 - 320
Target Start/End: Complemental strand, 34096546 - 34096352
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||| ||||||||||| |||  ||||||||| |   | |||  |||||| ||||| ||||    
T  34096546 aaataattatccgatacttcccgatacgtatcaggaaagtatccaataattatcctgcacctatacctgccccaataattctcaattaacgttaaataaa 34096447  T
Q  227 ataacttaacgtt-gagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatgt 320  Q
    ||||||||||  | ||||||||||||||||||||  |||||||||||||||||||||| ||||||||||| ||||||||||| |||||| |||||    
T  34096446 ataacttaactctcgagtatagtgcttcttttttagatcgatatagtatagcactaacaatgtttcttttagatatagtatagcacttacgatgt 34096352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 10763779 - 10763968
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| | || ||||||| | |||||| |||||||||||| |||  ||||||||| |   | |||| |||||| ||||| ||||    
T  10763779 aaataattatccgatacttccgg-tacgtatcagaaaagtatctgataattatcctgcacctatacctgccccaataattcccaattaacgttaaataaa 10763877  T
Q  227 ataacttaacgt-tgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||   ||||||| |||||||||||||  |||||||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  10763878 ataacttaactcctgagtatggtgcttcttttttagatcgatatagtatagcactaaaaatgtttcttttggatatagaatatcacttatg 10763968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 149 - 314
Target Start/End: Original strand, 10822541 - 10822707
Alignment:
Q  149 gatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaacg-ttgagtatag 247  Q
    |||| ||||||  ||| |||||||||||||||||  |  |||||||||| |   |||||  |||| ||||||| ||||||||||||||  |||||||||     
T  10822541 gatacgtatcacaagaatatccgataattatccttgatcgatacctgccccaatacttctcaattgatgttaattaaaataacttaactcttgagtataa 10822640  T
Q  248 tgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcactta 314  Q
    ||||||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||||| ||||||    
T  10822641 tgcttcttttttggatcgatataatatatcactaacaatgtttcttttggatatagtatagcactta 10822707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 24590117 - 24590008
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| ||||||||| ||||  ||||| ||||||||||||| |||||||||||| ||||| || | |   |||||| |||||||||||||||||    
T  24590117 aaataattatctgatacttcccgatacatatcaagagagtatccgatcattatcctacaccgatacatgtcccgatacttcccaattaatgttaactaaa 24590018  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  24590017 ataacttaac 24590008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 14334539 - 14334599
Alignment:
Q  247 gtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  14334539 gtgcttcttttttggatcgatatagtatagcactaacaatgtttcttttggatatagtata 14334599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 240 - 316
Target Start/End: Complemental strand, 34432294 - 34432218
Alignment:
Q  240 gagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||||||||||||| |||||||||||||| ||||||| |||||||||| ||||||||||||  |||||||    
T  34432294 gagtatagtgcttcttttttggatcgatatagtataacactaacaatgtttctttgggatatagtatagtacttatg 34432218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 43190021 - 43190085
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  43190021 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtata 43190085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 236
Target Start/End: Complemental strand, 2472904 - 2472807
Alignment:
Q  139 gatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaac 236  Q
    ||||||| | |||| ||||||||||||||||||||||||||||  ||| || ||||||| |   | |||| |||||||||||||||||||||||||||    
T  2472904 gatactttccgatacgtatcaggagagtatccgataattatccagcactgacacctgccccgatatttcccaattaatgttaactaaaataacttaac 2472807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 41675982 - 41675874
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    |||||||||||| |||||||| ||||  ||||||||||||||||||| |||||||||||| | || ||||| |   || ||| |||||||||||| ||||    
T  41675982 aaataattatccaatacttcccgatacttatcaggagagtatccgatcattatcctacaccggtatctgccccgatac-tcccaattaatgttaattaaa 41675884  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  41675883 ataacttaac 41675874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 24851599 - 24851704
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||||||||||    |||  ||||||||| |   | || | |||||||||||||||||    
T  24851599 aaataattatccgatacttcccgatacgcatcaggagagtatccgataattat----cacccatacctgccccgatattttccaattaatgttaactaaa 24851694  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  24851695 ataacttaac 24851704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 24851734 - 24851798
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||||  ||||||||||||||||    
T  24851734 tatagtgattcttttttggatcgatatagtatagcactaacaatgttcgttttggatatagtata 24851798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 31653156 - 31653092
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| ||||||||||||||||| |||| || || |||||||||||||||||    
T  31653156 tatagtgcttcttttttggatcgatatagtatagcattaacaattttccttttggatatagtata 31653092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 47654928 - 47655004
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||||||||||||||||| |||||||||||||| ||||||| |||||  ||||||||||| |||| |||| ||||||    
T  47654928 tatagtgcttcttttttggatcgatatagtataacactaacaatgttcattttggatataatatagcactgatgatg 47655004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 33039737 - 33039844
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||||||||||| | | ||| | ||  ||  |  | |||| |||||||||||||||||    
T  33039737 aaataattatccgatacttcccgatacgtatgaggagagtatccgataattatcatgcgcagttgcc--ccaatatatttcccaattaatgttaactaaa 33039834  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  33039835 ataacttaac 33039844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 36551536 - 36551618
Alignment:
Q  154 gtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaac 236  Q
    |||||||||||||||||||| ||||||||| |  |||| ||||| |   |||||| |||||||||||||||||||||||||||    
T  36551536 gtatcaggagagtatccgatcattatcctatatcgatatctgccccgatacttcccaattaatgttaactaaaataacttaac 36551618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 316
Target Start/End: Original strand, 14167315 - 14167384
Alignment:
Q  247 gtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    |||||||||| ||| |||||||||||||| ||||||| |||| |||||||||||||||||| | ||||||    
T  14167315 gtgcttctttcttggatcgatatagtataacactaacaatgtatcttttggatatagtatagctcttatg 14167384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 25257382 - 25257442
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  25257382 tatagtgcttcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 25257442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 28658744 - 28658684
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  28658744 tatagtgcttcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 28658684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 37104416 - 37104476
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||||||||||| | ||||||||||||||||||    
T  37104416 tatagtgattcttttttggatcgatatagtatagcactaac-aagtttcttttggatatagt 37104476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 38218508 - 38218617
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    |||||||||| |||||||||| ||||  ||| ||||||||||||||| ||||||||||||   || ||||| |   |||||| ||||||| ||| |||||    
T  38218508 aaataattattcgatacttcccgatacatattaggagagtatccgatcattatcctacaccagtatctgccccgatacttcccaattaatattagctaaa 38218607  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  38218608 ataacttaac 38218617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 47654789 - 47654898
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||| |||| |||  |||||| | ||||| ||||||||||||||||| |||||||||| |   | || | |||||||||| ||||||    
T  47654789 aaataattatccgatacatcctcatacttatcagaatagtattcgataattatcctacaccgatacctgccccgatattttccaattaatgttgactaaa 47654888  T
Q  227 ataacttaac 236  Q
    | ||||||||    
T  47654889 aaaacttaac 47654898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 13012730 - 13012666
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| ||||||||| |||||||||| | ||||| ||||| |||||||||||    
T  13012730 tatagtgcttcttttttggatcgatataatatagcactagcaatgttccttttagatatagtata 13012666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 36551643 - 36551717
Alignment:
Q  238 ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||| ||||||| |||||||||  |||||||||||||| ||||||| ||||| |||||||||||| |||| ||||    
T  36551643 ttgaatatagtgtttcttttttagatcgatatagtataacactaacaatgttccttttggatataatataacact 36551717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 37922478 - 37922520
Alignment:
Q  265 gatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  37922478 gatatagtatagcactaacaatgtttcttttggatatagtata 37922520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 5984952 - 5985012
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||||||||||| ||||||||||||||||||| || | ||| ||||||||||||||    
T  5984952 tatagtgcttcttttttggatcgatatagtatagcactgac-aagttccttttggatatagt 5985012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 30324485 - 30324545
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||||||||||| |||||||||||||||||||||| |  || ||||||||||||||    
T  30324485 tatagtgcttcttttttggatcgatatagtatagcactaac-aaattccttttggatatagt 30324545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 32380934 - 32380865
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||| ||||||||||||||||  |||||||||| ||||||| ||||| |||||| |||||||||| ||||    
T  32380934 tataatgcttcttttttgaataaatatagtataacactaacaatgttccttttgaatatagtataacact 32380865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 36363396 - 36363336
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  36363396 tatagtgattcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 36363336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 36367520 - 36367460
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  36367520 tatagtgattcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 36367460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 24589982 - 24589912
Alignment:
Q  238 ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatat 308  Q
    |||| ||||||| |||||||||| |||||||||||||| ||||||| |||||  ||||| ||||| |||||    
T  24589982 ttgaatatagtgtttcttttttggatcgatatagtataacactaacaatgttctttttgaatataatatat 24589912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 28948549 - 28948489
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | ||| ||||||||||||||    
T  28948549 tatagtgattcttttttggatcgatatagtataacactaac-aagttccttttggatatagt 28948489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 3708270 - 3708219
Alignment:
Q  129 ataattatccgatacttcctgatatgtatcaggagagtatccgataattatc 180  Q
    |||||||| |||||||||  |||| ||||||||||||||||| |||||||||    
T  3708270 ataattattcgatacttctcgatacgtatcaggagagtatccaataattatc 3708219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 236
Target Start/End: Complemental strand, 34432359 - 34432328
Alignment:
Q  205 ttcctaattaatgttaactaaaataacttaac 236  Q
    ||||||||||||||||||||||||||||||||    
T  34432359 ttcctaattaatgttaactaaaataacttaac 34432328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 3708140 - 3708099
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacg 284  Q
    |||| ||||||||||||| ||||||| |||||||||||||||    
T  3708140 tataatgcttcttttttggatcgataaagtatagcactaacg 3708099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 6916204 - 6916144
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | |||  |||||||||||||    
T  6916204 tatagtgattcttttttggatcgatatagtatatcactaac-aagttcattttggatatagt 6916144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 172
Target Start/End: Complemental strand, 34432433 - 34432400
Alignment:
Q  139 gatacttcctgatatgtatcaggagagtatccga 172  Q
    |||||||||||||| |||||||||||||||||||    
T  34432433 gatacttcctgatacgtatcaggagagtatccga 34432400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 37346696 - 37346631
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtt-tcttttggatatagtata 307  Q
    |||||||||||||||||  || |||||||||||||| |||| |||||  ||||| |||||||||||    
T  37346696 tatagtgcttctttttttgattgatatagtatagcattaacaatgttccctttttgatatagtata 37346631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 38331215 - 38331275
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | |||  |||||||||||||    
T  38331215 tatagtgattcttttttggatcgatatagtatatcactaac-aagttcattttggatatagt 38331275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 48715218 - 48715165
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatc 180  Q
    ||||||||||| ||||||||| ||||  ||||| ||||||||| ||||||||||    
T  48715218 aaataattatcagatacttcccgatacatatcaagagagtatctgataattatc 48715165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 3427622 - 3427662
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaac 283  Q
    ||||||| |||||||||| |||||||||||||| |||||||    
T  3427622 tatagtgattcttttttggatcgatatagtataacactaac 3427662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 127 - 319
Target Start/End: Complemental strand, 554883 - 554690
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| |||||||||| |   |||||| ||| |||||||||||||    
T  554883 aaataattatccgatacttcccgataagtatcaggagagtatccgataattatcctgcaccgatacctgccccaatacttcccaatcaatgttaactaaa 554784  T
Q  227 ataacttaac-gttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||| ||||||| |||| |||||| |||||||||||||||||||||||    
T  554783 ataacttaactcttgagtatagtgcttcttttttggatcgatatagtataacactaacaatgtatcttttagatatagtatatcacttatgatg 554690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 21409512 - 21409702
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| |||||||||| ||| |||||||||||||||| |||||||||||||||| |||||||||| |   |||| | |||||||||||||||||    
T  21409512 aaataattatcggatacttcctaatacgtatcaggagagtatctgataattatcctacaccgatacctgccccaatactttccaattaatgttaactaaa 21409611  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  ||||||||| ||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||| ||||||||    
T  21409612 ataacttaactcttgagtataatgcttcttttttggatcgatatagtatagcactaacaatatttcttttggatatagtatagcacttatg 21409702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 127 - 316
Target Start/End: Complemental strand, 23970119 - 23969929
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||| ||||||||| | |||| ||||||||||||||||||||||||||||| |||  |||| ||||     |||||  |||||||||||| ||||    
T  23970119 aaataattacccgatactttccgatacgtatcaggagagtatccgataattatcctgcaccaatacatgccctaatacttctcaattaatgttaattaaa 23970020  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  23970019 ataacttaactcttgagtatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtatagcacttatg 23969929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 127 - 298
Target Start/End: Original strand, 24956373 - 24956543
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    |||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||| ||| |||||||||| |   |||||| |||||||||||||||||    
T  24956373 aaataattatccgatacttcctaatacgtatcaagagagtatctgataattatcctgcaccgatacctgccacaatacttcccaattaatgttaactaaa 24956472  T
Q  227 ataacttaac-gttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttgga 298  Q
    ||||||||||  ||||||||| ||||||  ||||| |||||||||||||||||||||| ||||||||||||||    
T  24956473 ataacttaactcttgagtataatgcttc--ttttggatcgatatagtatagcactaacaatgtttcttttgga 24956543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 162 - 319
Target Start/End: Original strand, 48153702 - 48153860
Alignment:
Q  162 agagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaacg-ttgagtatagtgcttcttttttg 260  Q
    ||||||| ||||||||||| | |||  ||||||||| |   |||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  48153702 agagtattcgataattatcttgcaccaatacctgccccaatacttcccaattaatgttaattaaaataacttaactcttgagtatagtgcttcttttttg 48153801  T
Q  261 aatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
     |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  48153802 gatcgatatagtatagcactaacaatgttccttttggatatagtatagcacttatgatg 48153860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 26973175 - 26973369
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggaga----gtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaac 222  Q
    ||||||||||||||||||||| |||| ||||||||| |    |||||||||||||||| | |||  ||| ||||| |   | || | |||||| ||||      
T  26973175 aaataattatccgatacttcccgatacgtatcaggaaattaagtatccgataattatcatgcacctatatctgccccaataatttccaattaacgttata 26973274  T
Q  223 taaaataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    |||||||| |||||  ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  26973275 taaaataatttaactcttgagtatagtgcttcttttttggatcgatatagtatagcactaacaatgtttcttttggatatagtacaacacttatg 26973369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 40041500 - 40041609
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||| ||| |||||||||| |   | |||| |||||||||||||||||    
T  40041500 aaataattatccgatatttcccgatacgtatcaggagagtatccgataattatcctgcactgatacctgccccgatatttcccaattaatgttaactaaa 40041599  T
Q  227 ataacttaac 236  Q
    |||| |||||    
T  40041600 ataatttaac 40041609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 210 - 307
Target Start/End: Original strand, 36413575 - 36413672
Alignment:
Q  210 aattaatgttaactaaaataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    ||||| |||| ||||||||||||||||  |||||||||||||||||||||||| ||||||||||||| ||||||| ||||| |||||||||||||||||    
T  36413575 aattactgtttactaaaataacttaactcttgagtatagtgcttcttttttga-tcgatatagtataacactaacaatgttccttttggatatagtata 36413672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 36758009 - 36757900
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctg-cacttcctaattaatgttaactaa 225  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||||||||||| | ||| |||| ||||| |||  |||||| ||||||||||||||||    
T  36758009 aaataattatccaatacttcccgatacgtatcaggagagtatccgataattatctttcactgatatctgcc-ctgatacttcccaattaatgttaactaa 36757911  T
Q  226 aataacttaac 236  Q
    |||||||||||    
T  36757910 aataacttaac 36757900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 36767533 - 36767424
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctg-cacttcctaattaatgttaactaa 225  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||||||||||| | ||| |||| ||||| |||  |||||| ||||||||||||||||    
T  36767533 aaataattatccaatacttcccgatacgtatcaggagagtatccgataattatctttcactgatatctgcc-ctgatacttcccaattaatgttaactaa 36767435  T
Q  226 aataacttaac 236  Q
    |||||||||||    
T  36767434 aataacttaac 36767424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 1400261 - 1400152
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| ||||||||| |||| |||||||||||||||||||| |||||||||||||  || ||||| |   |||||| |||||||||||| ||||    
T  1400261 aaataattatctgatacttcccgatacgtatcaggagagtatccgatcattatcctacacatgtatctgccccgatacttcccaattaatgttaattaaa 1400162  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  1400161 ataacttaac 1400152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 44960128 - 44960019
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| ||||||||| ||||  ||||||| ||||||||||||||||| || ||| ||||||| || | | | |||| |||||||||||||||||    
T  44960128 aaataattatcggatacttcccgatacatatcaggggagtatccgataattattctgcactgatacctaccccggtatttcccaattaatgttaactaaa 44960029  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  44960028 ataacttaac 44960019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 19820852 - 19820788
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  19820852 tatagtgcttctttttcgaatcgatatagtatagcactaacaatgttccttttggatatagtata 19820788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 23078963 - 23078887
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||||| |||| ||||||    
T  23078963 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttcctttttgatatagtatagcactgatgatg 23078887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 8029073 - 8029137
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||| ||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  8029073 tatagtacttcttttttgaatcgatatactatagcactaacaatgtttcttttagatatagtata 8029137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 16564095 - 16564031
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||    
T  16564095 tatagtgcttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtata 16564031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 16601567 - 16601631
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||    
T  16601567 tatagtgcttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtata 16601631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 236
Target Start/End: Complemental strand, 15878407 - 15878308
Alignment:
Q  137 ccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaac 236  Q
    ||||||||| | |||| |||||||||||||||||||| |||||||||||| | || ||||| |   |||||| ||||||| |||||||||||||||||||    
T  15878407 ccgatactttccgatacgtatcaggagagtatccgatcattatcctacaccggtatctgccccgatacttcccaattaatattaactaaaataacttaac 15878308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 36763762 - 36763680
Alignment:
Q  154 gtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaac 236  Q
    ||||||||||||||||||||||||||| | ||| |||| ||||| |   |||||| |||||||||||||||||||||||||||    
T  36763762 gtatcaggagagtatccgataattatctttcactgatatctgccccgatacttcccaattaatgttaactaaaataacttaac 36763680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 1042922 - 1042858
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| |||||||||||||| ||||||| ||||| |||||||||||| ||||    
T  1042922 tatagtgcttcttttttggatcgatatagtataacactaacaatgttccttttggatataatata 1042858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 26773435 - 26773371
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||| ||||||||||||| |||||||||||||||||||||| ||||| | |||||||||||||||    
T  26773435 tataatgcttcttttttggatcgatatagtatagcactaacaatgttccgtttggatatagtata 26773371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 33454331 - 33454407
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||||||||||||||||| |||||||||||||| ||||||| |||||  ||||||||||| |||| |||| ||||||    
T  33454331 tatagtgcttcttttttggatcgatatagtataacactaacaatgttcattttggatataatatagcactgatgatg 33454407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 137 - 236
Target Start/End: Complemental strand, 23079092 - 23078993
Alignment:
Q  137 ccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaac 236  Q
    ||||||||||| |||| ||||||||||||||||||||| |||||||  || |||||||| | |   | |||| |||||||||||| ||||||||||||||    
T  23079092 ccgatacttcccgatacgtatcaggagagtatccgatagttatcctgtaccgatacctgtcccgatatttcccaattaatgttaattaaaataacttaac 23078993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 1400127 - 1400058
Alignment:
Q  238 ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||| ||||||| |||||||||  |||||||||||||| ||||||| ||||| |||||||||||||||||    
T  1400127 ttgaatatagtgtttcttttttagatcgatatagtataacactaacaatgttccttttggatatagtata 1400058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 44269847 - 44269956
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||| ||||||||||| |||| |||||| || |||||| ||||||||| |||||  |||| |||||||   | |||  ||| |||||||||||||    
T  44269847 aaataattaaccgatacttcccgatacgtatcaagaaagtatctgataattattctacatcgatatctgcctcgatatttcacaataaatgttaactaaa 44269946  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  44269947 ataacttaac 44269956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 47238092 - 47238031
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||  ||||||||| ||||    
T  47238092 tatagtgcttcttttttgaatcgatatagtatagcattaacaatgtcccttttggatgtagt 47238031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 9250165 - 9250089
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||||||||| ||||||  |||||||||||||| ||||||| |||||  ||||| ||||||||||||||| ||||||    
T  9250165 tatagtgcttattttttagatcgatatagtataacactaacaatgttctttttgaatatagtatatcactgatgatg 9250089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 9283715 - 9283639
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||||||||| ||||||  |||||||||||||| ||||||| |||||  ||||| ||||||||||||||| ||||||    
T  9283715 tatagtgcttattttttagatcgatatagtataacactaacaatgttctttttgaatatagtatatcactgatgatg 9283639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 15878278 - 15878202
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    ||||||| |||||||||  |||||||||||||| ||||||| |||||  |||||||||||||||| |||| ||||||    
T  15878278 tatagtgtttcttttttagatcgatatagtataacactaacaatgttcattttggatatagtataacactgatgatg 15878202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 21179959 - 21180011
Alignment:
Q  128 aataattatccgatacttcctgatatgtatcaggagagtatccgataattatc 180  Q
    |||||||||||||||||||| |||| |||||||||||||||| ||||||||||    
T  21179959 aataattatccgatacttcccgatacgtatcaggagagtatctgataattatc 21180011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 25969768 - 25969844
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||||||||| ||||||  |||||||||||||| ||||||| |||||  ||||| ||||||||||||||| ||||||    
T  25969768 tatagtgcttattttttagatcgatatagtataacactaacaatgttctttttgaatatagtatatcactgatgatg 25969844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 44269985 - 44270045
Alignment:
Q  247 gtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||  |||||||||||||| ||||||| ||||| |||||||||||||||||    
T  44269985 gtgcttcttttttttatcgatatagtataacactaacaatgttccttttggatatagtata 44270045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 35160124 - 35160196
Alignment:
Q  244 atagtgcttcttttttgaatcgatatagtatagcac----taacgatgtttcttttggatatagtatatcact 312  Q
    ||||||||||||||||| ||||||||||||||||||    |||| ||||| ||||||||||||||||| ||||    
T  35160124 atagtgcttcttttttggatcgatatagtatagcactaattaacaatgttccttttggatatagtatagcact 35160196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 38064931 - 38065001
Alignment:
Q  243 tatagtgcttctttttt-gaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    ||||||||||||||||| | ||||||||| |||| ||||||| ||||| ||||||||||||||||| ||||    
T  38064931 tatagtgcttctttttttggatcgatataatataacactaacaatgttccttttggatatagtatagcact 38065001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 16851080 - 16851140
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | ||||||||||||||||||    
T  16851080 tatagtgattcttttttggatcgatatagtatatcactaac-aagtttcttttggatatagt 16851140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 19820926 - 19820881
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccga 172  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  19820926 aaataattatccgatactttccgatatgtatcaggagagtatccga 19820881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 48163705 - 48163765
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  48163705 tatagtgattcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 48163765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 19510889 - 19510953
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||| ||| ||||||||| |||| ||||| | ||||| |||||||||||||||||    
T  19510889 tatagtgcttctttcttggatcgatataatataacactagcaatgttccttttggatatagtata 19510953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 302
Target Start/End: Original strand, 11830465 - 11830523
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatata 302  Q
    |||| ||||||||||||| |||||||||||||||||||||| | ||| ||||||||||||    
T  11830465 tataatgcttcttttttggatcgatatagtatagcactaac-aagttccttttggatata 11830523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 4291937 - 4291998
Alignment:
Q  245 tagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||| || ||||||||||||| || |||| ||||| |||||||||||||||||    
T  4291937 tagtgcttctttttgga-tcgatatagtataacattaacaatgttccttttggatatagtata 4291998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 1043183 - 1043081
Alignment:
Q  17 cccgatattttaaaatggatgacgtatcgtattccttgtgtattttgcattgatacctgtctga----ttccgatacgtatcgagagggtatccgaagat 112  Q
    ||||||| || ||||||||||||||||||||| || || ||||  ||||| |||||||| ||||    ||||||||||||||| ||| |||||| || ||    
T  1043183 cccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcatcgatacctgcctgatactttccgatacgtatcgggagagtatccaaatat 1043084  T
Q  113 taa 115  Q
    |||    
T  1043083 taa 1043081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 27354218 - 27354278
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| ||||||||| |||||||||||| | ||| ||||||||||||||    
T  27354218 tatagtgattcttttttggatcgatataatatagcactaac-aagttccttttggatatagt 27354278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 27555187 - 27555127
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | ||| ||||||||||||||    
T  27555187 tatagtgattcttttttggatcgatatagtataacactaac-aagttccttttggatatagt 27555127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 33454192 - 33454301
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||| | |||||||||  |||  ||| || ||||||| ||||||||||||||||| ||||| |||| |   | |||| |||||||||| ||||||    
T  33454192 aaataattagctgatacttcccaatacttattagaagagtattcgataattatcctacaccgatacttgccccgatatttcccaattaatgttgactaaa 33454291  T
Q  227 ataacttaac 236  Q
    | ||||||||    
T  33454292 aaaacttaac 33454301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 36757870 - 36757797
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcac----taacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||| ||||||| |||||||||||||| |||    |||| ||||| ||||||||||||||||| ||||    
T  36757870 tatagtgcttattttttggatcgatatagtataacactgattaacaatgttccttttggatatagtatagcact 36757797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 36763649 - 36763576
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcac----taacgatgtttcttttggatatagtatatcact 312  Q
    |||||||| ||||||||| |||||||||||||| |||    |||| ||||| ||||||||||||||||| ||||    
T  36763649 tatagtgcctcttttttggatcgatatagtataacactaattaacaatgttccttttggatatagtatagcact 36763576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 36767394 - 36767321
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcac----taacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||| ||||||| |||||||||||||| |||    |||| ||||| ||||||||||||||||| ||||    
T  36767394 tatagtgcttattttttggatcgatatagtataacactgattaacaatgttccttttggatatagtatagcact 36767321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 16850789 - 16850831
Alignment:
Q  17 cccgatattttaaaatggatgacgtatcgtattccttgtgtat 59  Q
    |||||||||| ||||||||||||||| |||||||| |||||||    
T  16850789 cccgatatttcaaaatggatgacgtaccgtattccctgtgtat 16850831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 169
Target Start/End: Complemental strand, 18113989 - 18113959
Alignment:
Q  139 gatacttcctgatatgtatcaggagagtatc 169  Q
    |||||||||||||||||||||||||||||||    
T  18113989 gatacttcctgatatgtatcaggagagtatc 18113959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 304
Target Start/End: Original strand, 36661244 - 36661301
Alignment:
Q  246 agtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||||||||||| ||||||| |||||| ||||||| | ||| ||||||||||||||    
T  36661244 agtgcttcttttttggatcgataaagtataacactaac-aagttccttttggatatagt 36661301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 172
Target Start/End: Original strand, 23311787 - 23311820
Alignment:
Q  139 gatacttcctgatatgtatcaggagagtatccga 172  Q
    ||||||||| ||||||||||||||||||||||||    
T  23311787 gatacttcccgatatgtatcaggagagtatccga 23311820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 27397459 - 27397399
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||| ||||||||||||| ||||||||| |||||||||||| | ||| |||||| |||||||    
T  27397459 tataatgcttcttttttggatcgatatattatagcactaac-aagttccttttgaatatagt 27397399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 35159987 - 35160095
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| |||| |||| ||||  |||||| |||||||||||||| |||| | ||| |||| ||||| |   |||||  |||||||||||| ||||    
T  35159987 aaataattatctgatagttcccgatacatatcagaagagtatccgataa-tatctttcactgatatctgccccgatacttctcaattaatgttaattaaa 35160085  T
Q  227 ataacttaac 236  Q
    |||| |||||    
T  35160086 ataatttaac 35160095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 9e-61; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 3892089 - 3892279
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| ||||||||  |||| ||||||||||||||||||||||||||||| ||| |||||||||| |   |||||| |||||||||||||||||    
T  3892089 aaataattatctgatacttctcgatacgtatcaggagagtatccgataattatcctgcaccgatacctgccccaatacttcccaattaatgttaactaaa 3892188  T
Q  227 ataacttaac-gttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  ||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  3892189 ataacttaactcttgagtatagtgcttcttttttggattgatatagtatagcactaacaatgtttcttttggatatagtataacacttatg 3892279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 128 - 316
Target Start/End: Original strand, 37372386 - 37372567
Alignment:
Q  128 aataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaa 227  Q
    ||||||||| ||||||||||  ||| ||||||||||||||||||||||||||  | ||| |||||||||| |   |||||| ||||||||||||||||||    
T  37372386 aataattattcgatacttcccaatacgtatcaggagagtatccgataattattttgcaccgatacctgccccaatacttcccaattaatgttaactaaaa 37372485  T
Q  228 taacttaa-cgttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||   ||||||||||||||||||||||| ||||||||| ||||||||        |||||||||||||||||||| ||||||||    
T  37372486 taacttaattcttgagtatagtgcttcttttttggatcgatataatatagcac--------tttcttttggatatagtatagcacttatg 37372567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 32425046 - 32425155
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| | || ||||| |   |||| | |||||||||||||||||    
T  32425046 aaataattatccgatacttcccgatatgtatcaggagagtatccgatcattatcctacaccggtatctgccccgatactttccaattaatgttaactaaa 32425145  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  32425146 ataacttaac 32425155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 7411727 - 7411836
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||  ||||  ||||||||||||||||||| |||||||||||  ||||| |||| |   |||||| |||||||||||||||||    
T  7411727 aaataattatccgatacttctcgatacatatcaggagagtatccgatcattatcctacattgatacatgccccgatacttcccaattaatgttaactaaa 7411826  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  7411827 ataacttaac 7411836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 210 - 307
Target Start/End: Complemental strand, 5818241 - 5818143
Alignment:
Q  210 aattaatgttaactaaaataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||||||||||||  ||||||||||| ||||| ||||| || ||| ||||||||||||||| ||||| |||||| ||||||||||    
T  5818241 aattaatgttaactaaaataacttaactcttgagtatagtacttctgttttggattgatgtagtatagcactaacaatgttccttttgaatatagtata 5818143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 6028867 - 6028931
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  6028867 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtata 6028931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 32877832 - 32877896
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  32877832 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtata 32877896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 27968230 - 27968339
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctg-cacttcctaattaatgttaactaa 225  Q
    ||||||||||| ||||||||  ||||  |||||||||||||||||||||||||| | ||| |||| ||||| |||  |||||| ||||||||||||||||    
T  27968230 aaataattatctgatacttctcgatacatatcaggagagtatccgataattatcttgcactgatatctgcc-ctgatacttcccaattaatgttaactaa 27968328  T
Q  226 aataacttaac 236  Q
    |||||||||||    
T  27968329 aataacttaac 27968339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 32844 - 32921
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatgt 320  Q
    |||| ||||| ||||||| ||| |||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  32844 tataatgctttttttttggatcaatatagtataacactaacaatgtttcttttggatatagtataacacttatgatgt 32921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 38388796 - 38388901
Alignment:
Q  131 aattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataa 230  Q
    |||||||| |||||||||||||  |||||| ||||||| ||||||||||||||||| |||||||||| |   | |||| |||||||||| ||||||| ||    
T  38388796 aattatccaatacttcctgatacttatcagaagagtattcgataattatcctacaccgatacctgccccgatatttcccaattaatgttgactaaaaaaa 38388895  T
Q  231 cttaac 236  Q
    ||||||    
T  38388896 cttaac 38388901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 19436629 - 19436693
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||    
T  19436629 tatagtgcttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtata 19436693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 19572778 - 19572842
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||    
T  19572778 tatagtgcttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtata 19572842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 27109049 - 27108977
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttat 315  Q
    |||||||||||||||||| |||||||||||||| ||||||| || || ||||||||||||||||| |||||||    
T  27109049 tatagtgcttcttttttggatcgatatagtataacactaacaattttccttttggatatagtatagcacttat 27108977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 19947716 - 19947652
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| |||||||||||||| || |||| ||||||||||||| |||||||||    
T  19947716 tatagtgcttcttttttggatcgatatagtataacattaacaatgtttcttttgggtatagtata 19947652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 28025216 - 28025325
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctg-cacttcctaattaatgttaactaa 225  Q
    ||||||||||| ||||||||  ||||  |||||||||||||||||||||||||| | ||| |||| ||||| |||  |||||  ||||||||||||| ||    
T  28025216 aaataattatctgatacttctcgatacatatcaggagagtatccgataattatcttgcactgatatctgcc-ctgatacttcacaattaatgttaacgaa 28025314  T
Q  226 aataacttaac 236  Q
    |||||||||||    
T  28025315 aataacttaac 28025325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 12579878 - 12579818
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  12579878 tatagtgcttcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 12579818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 20182498 - 20182607
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||| ||||||||||| |||| |||||| || |||||| ||||||||| |||||  |||| |||||||   | |||  ||| |||||||||||||    
T  20182498 aaataattaaccgatacttcccgatacgtatcaagaaagtatctgataattattctacatcgatatctgcctcgatatttcacaataaatgttaactaaa 20182597  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  20182598 ataacttaac 20182607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 32760131 - 32760191
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  32760131 tatagtgcttcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 32760191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 36484200 - 36484260
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  36484200 tatagtgcttcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 36484260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 20182635 - 20182695
Alignment:
Q  247 gtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||  |||||||||||||| ||||||| ||||| |||||||||||||||||    
T  20182635 gtgcttcttttttttatcgatatagtataacactaacaatgttccttttggatatagtata 20182695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 302
Target Start/End: Original strand, 42949446 - 42949505
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatata 302  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||||| |||| ||||||    
T  42949446 tatagtgcttcttttttggatcgatatagtatcgcactaacaatgtttatttttgatata 42949505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 27886460 - 27886510
Alignment:
Q  262 atcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  27886460 atcgatatagtataacactaacaatgtttcttttggatatagtataacact 27886510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 27945118 - 27945168
Alignment:
Q  262 atcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  27945118 atcgatatagtataacactaacaatgtttcttttggatatagtataacact 27945168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 28025361 - 28025411
Alignment:
Q  262 atcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  28025361 atcgatatagtataacactaacaatgtttcttttggatatagtataacact 28025411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 8170960 - 8170891
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||||||||||  |||||||||||||||||||| | |||||  |||||||||| ||||| ||||    
T  8170960 tatagtgcttcttttttagatcgatatagtatagcactaccaatgttctttttggatattgtatagcact 8170891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 22201160 - 22201100
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| ||||||||||||||| |||||| | ||||||||||||||||||    
T  22201160 tatagtgattcttttttggatcgatatagtatagtactaac-aagtttcttttggatatagt 22201100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 28875907 - 28875847
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  28875907 tatagtgattcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 28875847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 29355882 - 29355951
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||||||||||  ||  |||||||||| ||||||| |||||||||||| |||||||||| ||||    
T  29355882 tatagtgcttcttttttttattaatatagtataacactaacaatgtttcttttgaatatagtatagcact 29355951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 38388939 - 38389007
Alignment:
Q  251 ttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    ||||||||||||||||||||||||| ||||||| |||||  ||||||||| | |||| |||| ||||||    
T  38388939 ttcttttttgaatcgatatagtataacactaacaatgttcattttggataaaatatagcactcatgatg 38389007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 40412807 - 40412871
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||| ||||||  |||||||||||||||||||||| |||||   |||||||||||||||    
T  40412807 tatagtgctttttttttagatcgatatagtatagcactaacaatgttctctttggatatagtata 40412871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 302
Target Start/End: Original strand, 37669345 - 37669403
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatata 302  Q
    |||||||||||||||||| ||| ||||| |||||||||||| | ||||||||||||||||    
T  37669345 tatagtgcttcttttttggatcaatataatatagcactaac-aagtttcttttggatata 37669403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 27886343 - 27886424
Alignment:
Q  155 tatcaggagagtatccgataattatcctacacagatacctgcctctg-cacttcctaattaatgttaactaaaataacttaac 236  Q
    |||||||||||||||||||||||||| | ||| |||| ||||| |||  |||||  ||||||||||||| |||||||||||||    
T  27886343 tatcaggagagtatccgataattatcttgcactgatatctgcc-ctgatacttcacaattaatgttaacgaaaataacttaac 27886424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 27945001 - 27945082
Alignment:
Q  155 tatcaggagagtatccgataattatcctacacagatacctgcctctg-cacttcctaattaatgttaactaaaataacttaac 236  Q
    |||||||||||||||||||||||||| | ||| |||| ||||| |||  |||||  ||||||||||||| |||||||||||||    
T  27945001 tatcaggagagtatccgataattatcttgcactgatatctgcc-ctgatacttcacaattaatgttaacgaaaataacttaac 27945082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 27968375 - 27968425
Alignment:
Q  262 atcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||||| ||||    
T  27968375 atcgatatagtataacactaacaatgttccttttggatatagtataacact 27968425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 5540198 - 5540258
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| ||||||||| |||||||||||| | ||| ||||||||||||||    
T  5540198 tatagtgattcttttttggatcgatataatatagcactaac-aagttccttttggatatagt 5540258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 32638556 - 32638496
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||||||||||| |||||||| ||||||||||||| | ||| |||||| |||||||    
T  32638556 tatagtgcttcttttttggatcgatattgtatagcactaac-aagttccttttgaatatagt 32638496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 37372266 - 37372367
Alignment:
Q  18 ccgatattttaaaatggatgacgtatcgtattccttgtgtattttgcattgatacctgtctga----ttccgatacgtatcgagagggtatccgaagatt 113  Q
    |||||| || |||||||||||||||||||||  | || ||||  |||| ||||||||||||||    | ||||||||||||  ||| |||||||||||||    
T  37372266 ccgatacttcaaaatggatgacgtatcgtatctcctgcgtatcctgcactgatacctgtctgatacttcccgatacgtatcaggagagtatccgaagatt 37372365  T
Q  114 aa 115  Q
    ||    
T  37372366 aa 37372367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 7411867 - 7411930
Alignment:
Q  244 atagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||  |||||| |||||||||||||| ||||||| |||||| |||| |||||| ||||    
T  7411867 atagtgctttctttttggatcgatatagtataacactaacaatgtttattttagatataatata 7411930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 315
Target Start/End: Original strand, 28737776 - 28737834
Alignment:
Q  257 tttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttat 315  Q
    |||| ||||||||| |||| || |||  ||||||||||||||||||||||| |||||||    
T  28737776 tttggatcgatataatataccattaataatgtttcttttggatatagtatagcacttat 28737834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 29355760 - 29355858
Alignment:
Q  138 cgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaac 236  Q
    |||||||||| |||| |||| |||| |||||| ||||||||||||||   |||| |||||||   | |||  ||| ||||||||||| |||||||||||    
T  29355760 cgatacttcccgatacgtataaggaaagtatctgataattatcctacgtcgatatctgcctcgatatttcacaataaatgttaactacaataacttaac 29355858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 4246705 - 4246765
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | |||  |||||||||||||    
T  4246705 tatagtgattcttttttggatcgatatagtatatcactaac-aagttcattttggatatagt 4246765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 25022531 - 25022592
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| ||| ||||||||||||| || | |||||  |||||||||||||    
T  25022531 tatagtgtttcttttttggatcaatatagtatagcattatcaatgttctttttggatatagt 25022592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 34900711 - 34900651
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | |||  |||||||||||||    
T  34900711 tatagtgattcttttttggatcgatatagtatatcactaac-aagttcattttggatatagt 34900651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 45216554 - 45216502
Alignment:
Q  251 ttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||| |||||||||||||| ||||||| | ||| ||||||||||||||    
T  45216554 ttcttttttggatcgatatagtataacactaac-aagttccttttggatatagt 45216502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 32424928 - 32425029
Alignment:
Q  18 ccgatattttaaaatggatgacgtatcgtattccttgtgtattttgcattgatacctgtctgattc----cgatacgtatcgagagggtatccgaagatt 113  Q
    |||||| || ||||||||||||||| ||||| ||||| ||||  ||||  |||||||||||||| |    |||||||||||   || |||||||||||||    
T  32424928 ccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctgtctgatacttcacgatacgtatcagaagagtatccgaagatt 32425027  T
Q  114 aa 115  Q
    ||    
T  32425028 aa 32425029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 43771046 - 43771006
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaac 283  Q
    ||||||| |||||||||| |||||||||||||| |||||||    
T  43771046 tatagtgattcttttttggatcgatatagtataacactaac 43771006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 134 - 319
Target Start/End: Original strand, 51858927 - 51859113
Alignment:
Q  134 tatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataactt 233  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||| | ||| ||||||||||||   |||||| ||||||||||||||||||||||||    
T  51858927 tatccgatacttcccgatacgtatcaggagagtatccgataattatcttgcactgatacctgcctcaatacttcccaattaatgttaactaaaataactt 51859026  T
Q  234 aac-gttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||  ||||||||  ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  51859027 aactcttgagtattatgcttcttttttggatcgatatagtataacactaacaatgtttcttttggatatagtatagcacttatgatg 51859113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 127 - 319
Target Start/End: Original strand, 40694195 - 40694388
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| ||||||||| |||| |||| |||||||||||| ||||||||||| ||| |||| ||||| |   |||||| ||||||| |||||||||    
T  40694195 aaataattatctgatacttcccgatacgtatgaggagagtatccaataattatcctgcactgatatctgccccaatacttcccaattaatattaactaaa 40694294  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  40694295 ataacttaactcttgagtataatgcttcttttttgaatcgatatagtatagtactaacaatgtttcttttggatataatatatcacttatgatg 40694388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 1177102 - 1177292
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||  ||||||||| |   | |||| |||||| ||||| ||||    
T  1177102 aaataattatccgatacttcccgatacgtatcaggaaagtatccgataattatcctgcacctatacctgccccaataattcccaattaacgttaaataaa 1177201  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  ||||||||| ||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  1177202 ataacttaactcttgagtataatgcttcttttttggattgatatagtatagcactaacaatgtttcttttggatatagtatagcacttatg 1177292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 127 - 316
Target Start/End: Complemental strand, 36511926 - 36511736
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||  ||  ||||||||| |   | |||| |||||| ||||| ||||    
T  36511926 aaataattatccgatacttcctgatacgtatcaggaaagtatccgataattatcctgaacttatacctgccccaataattcccaattaacgttaaataaa 36511827  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||| |||||||||||  ||||||||||||||||||||||| ||||||||    
T  36511826 ataacttaactcttgagtatagtgcttcttttttggatcgatataatatagcactaagaatgtttcttttggatatagtatagcacttatg 36511736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 127 - 316
Target Start/End: Complemental strand, 31946219 - 31946030
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||  |   ||| ||||| |   |||||| |||||||||||| ||||    
T  31946219 aaataattatccgatacttcccgatacgtatcaggagagtatccgataattatcctgtaacaatatctgccccaatacttcccaattaatgttaattaaa 31946120  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  ||||||||||||||||||||||| |||||||| ||||||||||||| ||||| ||||| ||||||||||| ||||||||    
T  31946119 ataacttaactcttgagtatagtgcttcttttttggatcgatat-gtatagcactaacaatgttccttttagatatagtatagcacttatg 31946030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 203 - 316
Target Start/End: Original strand, 47607302 - 47607416
Alignment:
Q  203 acttcctaattaatgttaactaaaataacttaac-gttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatat 301  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| ||||| ||||||| ||||||||| |||||||| ||| |||||||||||||||||    
T  47607302 acttcctaattaatgttaactaagataacttaactgttgagtataatgctttttttttggatcgatataatatagcaccaacaatgtttcttttggatat 47607401  T
Q  302 agtatatcacttatg 316  Q
    |||||| ||||||||    
T  47607402 agtatagcacttatg 47607416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 318
Target Start/End: Original strand, 51674923 - 51675106
Alignment:
Q  136 tccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaa 235  Q
    |||||||||| | ||||| |||||| | |||||   ||||||||||| ||| |||| |||| ||   | |||| ||||||||||||||||||||||||||    
T  51674923 tccgatactttccgatatatatcagaaaagtattttataattatcctgcacggatatctgcttcaatatttcccaattaatgttaactaaaataacttaa 51675022  T
Q  236 cgtt-gagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgat 318  Q
      || ||||||||||||||||||||| || ||||||||||| ||||||| || || ||||   |||||||||| ||||||||||    
T  51675023 tttttgagtatagtgcttcttttttggatagatatagtatatcactaacaatattcctttctaatatagtataacacttatgat 51675106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 36943794 - 36943903
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctg-cacttcctaattaatgttaactaa 225  Q
    ||||||||||| |||||||||||||| |||||||||||||||| ||| |||||||||||| | || ||||| |||  |||||| ||||||||||||||||    
T  36943794 aaataattatctgatacttcctgatacgtatcaggagagtatctgatcattatcctacaccggtatctgcc-ctgatacttcccaattaatgttaactaa 36943892  T
Q  226 aataacttaac 236  Q
    |||||||||||    
T  36943893 aataacttaac 36943903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 46431926 - 46431817
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctg-cacttcctaattaatgttaactaa 225  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||||||| | ||| |||||||||| |||  | |||  ||||||||||||||||    
T  46431926 aaataattatccgatacttttcgatatgtatcaggagagtatccgataattatcatgcaccgatacctgcc-ctgatatttcacaattaatgttaactaa 46431828  T
Q  226 aataacttaac 236  Q
    |||||||||||    
T  46431827 aataacttaac 46431817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 3109298 - 3109189
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||  |||| ||||| ||||||||||| || |||||||||||| | || ||||| |   |||||| |||||||||||||||||    
T  3109298 aaataattatccgatacttctcgatacgtatccggagagtatccaatcattatcctacaccggtatctgccccgatacttcccaattaatgttaactaaa 3109199  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  3109198 ataacttaac 3109189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 24793724 - 24793615
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| |||||||||  ||| |||||||||||||||||||| ||||||||||||   || || ||||   |||||| |||||||||||||||||    
T  24793724 aaataattatctgatacttcccaatacgtatcaggagagtatccgatcattatcctacaccagtaactacctcgatacttcccaattaatgttaactaaa 24793625  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  24793624 ataacttaac 24793615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 42630476 - 42630372
Alignment:
Q  128 aataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaa 227  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||| | ||| |||| ||||  |   |||||  ||||||||||||||||||    
T  42630476 aataattatccgatacttcctgatacgtatcaggtgagtatccgataattatcttgcactgatatctgctccgatacttcacaattaatgttaactaaaa 42630377  T
Q  228 taact 232  Q
    |||||    
T  42630376 taact 42630372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 127 - 319
Target Start/End: Original strand, 2586461 - 2586656
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    |||||||||||| |||||||| ||||  || |||||||||||| ||| |||||||||||| | || ||||| |   |||||| |||||||||||||||||    
T  2586461 aaataattatcctatacttcccgatacataccaggagagtatctgatcattatcctacaccggtatctgccccgatacttcccaattaatgttaactaaa 2586560  T
Q  227 ataacttaac-gttgagta-tagtg-cttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    ||||||||||  || || | |  ||  |||||||||  |||||||||||||| || |||| ||||| |||||||||||| |||| |||| ||||||    
T  2586561 ataacttaactcttcaggactgatgtgttcttttttagatcgatatagtataacattaacaatgttccttttggatataatataacactgatgatg 2586656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 754295 - 754404
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||| |||||||||||| |||| | ||| |   |||| | | |||||||||||||||    
T  754295 aaataattatcatatacttcctgatacgtatcaggagagtatccgatcattatcctacaccgatatccgccccgatacttaccatttaatgttaactaaa 754394  T
Q  227 ataacttaac 236  Q
     |||||||||    
T  754395 ctaacttaac 754404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 49470419 - 49470514
Alignment:
Q  140 atacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaac 236  Q
    |||||||| |||| |||||||||||||||| |||||||||||| ||| |||| ||||| |   |||||| |||||||||||||||||||||||||||    
T  49470419 atacttcccgatacgtatcaggagagtatctgataattatcctgcactgatatctgccccgatacttcc-aattaatgttaactaaaataacttaac 49470514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 320
Target Start/End: Original strand, 14614712 - 14614823
Alignment:
Q  210 aattaatgttaactaaaataacttaacgtt-gagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatat 308  Q
    ||||||||||||||||||||| |||||  | ||||||| ||||||||||||  ||| ||||| |||||||||||| || |||||||||||||||  |||     
T  14614712 aattaatgttaactaaaataatttaactctcgagtataatgcttcttttttagatcaatataatatagcactaacaatatttcttttggatataacataa 14614811  T
Q  309 cacttatgatgt 320  Q
    || |||||||||    
T  14614812 catttatgatgt 14614823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 5835207 - 5835271
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||  ||||||||||||||||| |||| ||||| |||||||||||||||||    
T  5835207 tatagtgcttctttttttgatcgatatagtatagcattaacaatgttccttttggatatagtata 5835271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 24793585 - 24793509
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    ||||||| |||||||||  |||||||||||||| ||||||| ||||| ||||||||||||||||| |||| ||||||    
T  24793585 tatagtgtttcttttttagatcgatatagtataacactaacaatgttccttttggatatagtataacactgatgatg 24793509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 28377274 - 28377338
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||  ||||||||||| ||||    
T  28377274 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttctttttggatataatata 28377338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 42630332 - 42630256
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||| |||||||||||||||||||| ||||||| ||||||| ||||| |||||||||| |||||| |||| ||||||    
T  42630332 tataatgcttcttttttgaatcgatgtagtataacactaacaatgttccttttggatagagtataacactgatgatg 42630256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 236
Target Start/End: Complemental strand, 44522017 - 44521930
Alignment:
Q  149 gatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaac 236  Q
    |||| ||||||||||||||||||||||||||||| ||  |||| ||||| |   |||| | |||||||||||||||||||||||||||    
T  44522017 gatacgtatcaggagagtatccgataattatccttcattgatatctgccccgatactttccaattaatgttaactaaaataacttaac 44521930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 44521905 - 44521831
Alignment:
Q  238 ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||| |||| ||||||||||||| |||||||||||||| || |||| ||||| ||||||||||||||||| ||||    
T  44521905 ttgaatataatgcttcttttttggatcgatatagtataacattaacaatgttccttttggatatagtatagcact 44521831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 3109164 - 3109095
Alignment:
Q  238 ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||| ||||||| |||||||||  |||||||||||||| ||||||| ||||| |||||||||||||||||    
T  3109164 ttgaatatagtgtttcttttttagatcgatatagtataacactaacaatgttccttttggatatagtata 3109095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 17892373 - 17892482
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||  |||||||||  ||| ||||||||||||||||| || ||||||||||||   || ||||| |   |||||| ||||||||||||| |||    
T  17892373 aaataattatatgatacttcccaatacgtatcaggagagtatccaatcattatcctacaccagtatctgccccgatacttcccaattaatgttaacaaaa 17892472  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  17892473 ataacttaac 17892482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 36943928 - 36944009
Alignment:
Q  238 ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||| ||||||| |||||||||  ||||||||||||||  |||||| ||||| ||||||||||||||||| |||| ||||||    
T  36943928 ttgaatatagtgtttcttttttagatcgatatagtataatactaacaatgttccttttggatatagtataacactgatgatg 36944009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 41146382 - 41146442
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||||||||||||||||||||||||||||| ||||||| | ||| ||||||||||||||    
T  41146382 tatagtgcttcttttttgaatcgatatagtataacactaac-aagttccttttggatatagt 41146442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 39957952 - 39958016
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||  |||||||||||||||||||||| |||||  |||| |||||||||||    
T  39957952 tatagtgcttcttttttagatcgatatagtatagcactaacaatgttctttttagatatagtata 39958016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 52721618 - 52721694
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||||||||||||||||  |||||||||||||| ||||||| |||||  ||||| ||||||||||||| | ||||||    
T  52721618 tatagtgcttcttttttagatcgatatagtataacactaacaatgttctttttgaatatagtatatcattgatgatg 52721694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 55901002 - 55900926
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||| ||||||||||||| |||||||||||||| ||||||| |||||  ||||||||||| |||| |||| ||||||    
T  55901002 tataatgcttcttttttggatcgatatagtataacactaacaatgttcattttggatataatatagcactgatgatg 55900926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 304
Target Start/End: Original strand, 53323120 - 53323177
Alignment:
Q  246 agtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  53323120 agtgcttcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 53323177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 316
Target Start/End: Complemental strand, 258941 - 258872
Alignment:
Q  248 tgcttcttttttgaatcgatatagtatagcactaacgatgtttc-ttttggatatagtatatcacttatg 316  Q
    ||||||||||||| ||| ||||||||||||| |||| ||||| | |||||||||||||||| ||||||||    
T  258941 tgcttcttttttggatcaatatagtatagcagtaacaatgttccgttttggatatagtataacacttatg 258872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 17892507 - 17892588
Alignment:
Q  238 ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||| ||||||| |||||||||  || ||||||||||| ||||||| ||||| |||||| |||||||||| |||| ||||||    
T  17892507 ttgaatatagtgtttcttttttagattgatatagtataacactaacaatgttccttttgaatatagtataacactgatgatg 17892588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 24784636 - 24784700
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||  || ||||||||||||||||| | |||||  ||||||||||||||||    
T  24784636 tatagtgcttcttttttagattgatatagtatagcactatcaatgttctttttggatatagtata 24784700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 24823630 - 24823566
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||  || ||||||||||||||||| | |||||  ||||||||||||||||    
T  24823630 tatagtgcttcttttttagattgatatagtatagcactatcaatgttctttttggatatagtata 24823566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 726546 - 726496
Alignment:
Q  130 taattatccgatacttcctgatatgtatcaggagagtatccgataattatc 180  Q
    ||||||||  ||||||||||||| |||||||||||||||||||| ||||||    
T  726546 taattatcatatacttcctgatacgtatcaggagagtatccgatcattatc 726496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 3402914 - 3402854
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | ||| ||||||||||||||    
T  3402914 tatagtgattcttttttggatcgatatagtatatcactaac-aagttccttttggatatagt 3402854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 304
Target Start/End: Original strand, 31227126 - 31227178
Alignment:
Q  251 ttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  31227126 ttcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 31227178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 38492094 - 38492042
Alignment:
Q  251 ttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  38492094 ttcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 38492042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 47607242 - 47607290
Alignment:
Q  131 aattatccgatacttcctgatatgtatcaggagagtatccgataattat 179  Q
    ||||||| ||||||||| |||| ||||||||| ||||||||||||||||    
T  47607242 aattatctgatacttcccgatacgtatcaggatagtatccgataattat 47607290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 37992525 - 37992455
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcc 197  Q
    |||||||||||||||| |||| ||||  ||||||||||||||| ||| ||||| || ||| |||| |||||    
T  37992525 aaataattatccgataattcccgatacatatcaggagagtatctgatgattattctgcaccgatatctgcc 37992455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 8063437 - 8063377
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | |||  |||||||||||||    
T  8063437 tatagtgattcttttttggatcgatatagtatatcactaac-aagttcattttggatatagt 8063377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 14795785 - 14795841
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggata 300  Q
    ||||||| |||||||| | |||||||||||||||||||||| | ||| ||||||||||    
T  14795785 tatagtgattctttttcggatcgatatagtatagcactaac-aagttccttttggata 14795841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 49470559 - 49470604
Alignment:
Q  262 atcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||  ||||||| ||||| |||||||||||||||||    
T  49470559 atcgatatagtatgtcactaacaatgttccttttggatatagtata 49470604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 52572975 - 52573023
Alignment:
Q  255 tttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  52572975 tttttggatcgatatagtatagcactaac-aagttccttttggatatagt 52573023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 31946315 - 31946283
Alignment:
Q  19 cgatattttaaaatggatgacgtatcgtattcc 51  Q
    ||||| |||||||||||||||||||||||||||    
T  31946315 cgatactttaaaatggatgacgtatcgtattcc 31946283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 5e-56; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 26716398 - 26716588
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||  |||||||||||   |||||| |||||||||||  ||||    
T  26716398 aaataattatccgatacttcccgatacgtatcaggagagtatccgataattatcctgcaccaatacctgcctcaatacttcccaattaatgttagttaaa 26716497  T
Q  227 ataacttaac-gttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||| |||||  |||||||||||||||| ||| ||||    
T  26716498 ataacttaactcttgagtatagtgcttcttttttggatcgatatagtatagcactaacaatgttcattttggatatagtataacacctatg 26716588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 26986138 - 26986328
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||  |||||||||||   |||||| |||||||||||  ||||    
T  26986138 aaataattatccgatacttcccgatacgtatcaggagagtatccgataattatcctgcaccaatacctgcctcaatacttcccaattaatgttagttaaa 26986237  T
Q  227 ataacttaac-gttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||| |||||  |||||||||||||||| ||| ||||    
T  26986238 ataacttaactcttgagtatagtgcttcttttttggatcgatatagtatagcactaacaatgttcattttggatatagtataacacctatg 26986328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 127 - 316
Target Start/End: Complemental strand, 43357752 - 43357562
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| ||||||||| |||||| |||||||||||| |||  |||||||||||   | |||| |||||| ||||| ||||    
T  43357752 aaataattatccgatacttcccgatacgtatcaggaaagtatctgataattatcctgcacctatacctgcctcaataattcccaattaacgttaaataaa 43357653  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||    
T  43357652 ataacttaactcttgagtatagtgcttcttttttgaatcgatatagtatagcactaacaatgtttcttttggatatagtatagtacttatg 43357562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 128 - 319
Target Start/End: Complemental strand, 3934779 - 3934587
Alignment:
Q  128 aataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaa 227  Q
    ||||||||||| |||||| | |||| |||||| |||||||||||||||||||||| ||  |||||||||||    |||||| ||||||||||||||||||    
T  3934779 aataattatccaatactttccgatacgtatcatgagagtatccgataattatcctgcatcgatacctgcctaaatacttcccaattaatgttaactaaaa 3934680  T
Q  228 taacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||||||||  ||||||||| ||||||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  3934679 taacttaactcttgagtataatgcttcttttttggatcgatataatataacactaacaatgtttcttttggatatagtataacacttatgatg 3934587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 1795518 - 1795708
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||| |||| ||||||| |     | |||| || ||| ||||| ||||    
T  1795518 aaataattatccgatacttcccgatacgtatcagaaaagtatccgataattatcctgcacatatacctgtccaaataattcccaactaacgttaaataaa 1795617  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  1795618 ataacttaactcttgagtatagtgcttcttttttggatcgatatagtatagcactaacaatgtttcttttggatatagtataacacttatg 1795708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 25749731 - 25749921
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| ||||||| | |||| ||||||||||||||||||||||||||||| |||  ||||||||| |   |||||| |||||||||||| ||||    
T  25749731 aaataattatctgatactttccgatacgtatcaggagagtatccgataattatcctgcaccaatacctgccccaatacttcccaattaatgttaattaaa 25749830  T
Q  227 ataacttaac-gttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  ||||||||||||||||||||||| |||||| || |||||||||||| |||||  ||||||||||||| || ||||||||    
T  25749831 ataacttaacttttgagtatagtgcttcttttttggatcgatgtaatatagcactaacaatgttcattttggatatagtgtagcacttatg 25749921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 127 - 307
Target Start/End: Complemental strand, 42366100 - 42365918
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||| | |||||||||    |||||| |||||||||||||| ||    
T  42366100 aaataattatccaatacttcccgatatgtatcaggagagtatccgataattatcctgcaccgttacctgcctaaatacttcccaattaatgttaactgaa 42366001  T
Q  227 ataacttaac-gttgagtatagtgcttc-ttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    ||||||||||  ||||||||| |||||| ||||||| ||||||||||||||  |||||  || || |||||||||||||||||    
T  42366000 ataacttaacttttgagtataatgcttctttttttggatcgatatagtatataactaagaatcttccttttggatatagtata 42365918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 27938284 - 27938474
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||  ||| || ||     |||||  ||||||| |||| ||||    
T  27938284 aaataattatccgatacttcccaatacgtatcaggagagtatccgataattatcctacaccaatatctaccctaatacttctcaattaatattaattaaa 27938383  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  || |||||||||||||||||||| ||||||||||| ||||||||||  |||| ||||||||||||||||| ||| ||||    
T  27938384 ataacttaactcttaagtatagtgcttcttttttggatcgatatagtgtagcactaacagtgttccttttggatatagtatagcacgtatg 27938474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 210 - 316
Target Start/End: Original strand, 14836540 - 14836647
Alignment:
Q  210 aattaatgttaactaaaataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatat 308  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||||||||||     
T  14836540 aattaatgttaaataaaataacttaactcttgagtatagtgcttcttttttggatcgatatagtatatcactaacaaagtttcttttggatatagtataa 14836639  T
Q  309 cacttatg 316  Q
    ||||||||    
T  14836640 cacttatg 14836647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 210 - 319
Target Start/End: Original strand, 7629254 - 7629364
Alignment:
Q  210 aattaatgttaactaaaataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatat 308  Q
    |||||||||||||||||||| ||||||  ||||||| | ||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||     
T  7629254 aattaatgttaactaaaatagcttaactcttgagtacaatgcttcttttttggatcgatatagtatagcactaacaatgtatcttttggatatagtatag 7629353  T
Q  309 cacttatgatg 319  Q
    |||| ||||||    
T  7629354 cactaatgatg 7629364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 5612435 - 5612326
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||| | |||||||| |   | |||| |||||||||||| ||||    
T  5612435 aaataattatccgatacttcctgatacgtatcaggagagtatctgataattatcctgcaccgctacctgccccgatagttcccaattaatgttaattaaa 5612336  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  5612335 ataacttaac 5612326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 17138244 - 17138138
Alignment:
Q  130 taattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctg-cacttcctaattaatgttaactaaaat 228  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||||||||||| ||| |||| ||||| |||  | |||| |||||||||||||||||||    
T  17138244 taattatctgatacttcccgatacgtatcaggagagtatccgataattatcctgcactgatatctgcc-ctgatatttcccaattaatgttaactaaaat 17138146  T
Q  229 aacttaac 236  Q
    ||||||||    
T  17138145 aacttaac 17138138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 140 - 282
Target Start/End: Complemental strand, 35746300 - 35746158
Alignment:
Q  140 atacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaacg-t 238  Q
    |||||| | |||| |||||||||||||||| |||||||||||| ||| ||||| || | |   |||||| |||||||||||| ||||||||||||||  |    
T  35746300 atactttccgatacgtatcaggagagtatctgataattatcctgcactgatacatgtc-caatacttcccaattaatgttaagtaaaataacttaactct 35746202  T
Q  239 tgagtatagtgcttcttttttgaatcgatatagtatagcactaa 282  Q
    ||||||||||| |||||||||  |||||||||||||| ||||||    
T  35746201 tgagtatagtgtttcttttttagatcgatatagtataacactaa 35746158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 235
Target Start/End: Original strand, 26691622 - 26691849
Alignment:
Q  17 cccgatattttaaaatggatgacgtatcgtattccttgtgtattttgcattgatacctgtctgattc----cgatacgtatcgagagggtatccgaagat 112  Q
    ||||||| || ||||| ||||||||||||||| || || ||||| ||||  |||||||||||||| |    ||||||||||| |||| ||||||||||||    
T  26691622 cccgatacttcaaaatagatgacgtatcgtatcccctgcgtattctgcaccgatacctgtctgatacttcccgatacgtatcaagagagtatccgaagat 26691721  T
Q  113 taannnnnnnnnnn-----aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttc 207  Q
    |||                ||||||||||||||||||||| |||| ||||||||| ||||| ||||||||||||| ||  |||| ||||  |   |||||    
T  26691722 taaattttattttttttaaaaataattatccgatacttcccgatacgtatcaggatagtatgcgataattatcctgcattgatatctgctccgatacttc 26691821  T
Q  208 ctaattaatgttaactaaaataacttaa 235  Q
    | ||||||||||||||||||||||||||    
T  26691822 ccaattaatgttaactaaaataacttaa 26691849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 235
Target Start/End: Original strand, 26961354 - 26961581
Alignment:
Q  17 cccgatattttaaaatggatgacgtatcgtattccttgtgtattttgcattgatacctgtctgattc----cgatacgtatcgagagggtatccgaagat 112  Q
    ||||||| || ||||| ||||||||||||||| || || ||||| ||||  |||||||||||||| |    ||||||||||| |||| ||||||||||||    
T  26961354 cccgatacttcaaaatagatgacgtatcgtatcccctgcgtattctgcaccgatacctgtctgatacttcccgatacgtatcaagagagtatccgaagat 26961453  T
Q  113 taannnnnnnnnnn-----aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttc 207  Q
    |||                ||||||||||||||||||||| |||| ||||||||| ||||| ||||||||||||| ||  |||| ||||  |   |||||    
T  26961454 taaattttattttttttaaaaataattatccgatacttcccgatacgtatcaggatagtatgcgataattatcctgcattgatatctgctccgatacttc 26961553  T
Q  208 ctaattaatgttaactaaaataacttaa 235  Q
    | ||||||||||||||||||||||||||    
T  26961554 ccaattaatgttaactaaaataacttaa 26961581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 22737964 - 22738072
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| |||| || |||||| ||||||| |||||||| |||||||||||| ||| ||||||||||||   |||||  |||||||||||||||||    
T  22737964 aaataattatc-gataatttctgatacgtatcagaagagtatctgataattatcctgcactgatacctgcctcgatacttctcaattaatgttaactaaa 22738062  T
Q  227 ataacttaac 236  Q
    |||| |||||    
T  22738063 ataatttaac 22738072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 5722241 - 5722317
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    ||||||||||||||||||||||||||||| ||| ||||||| |||||| ||||||||||| |||| |||| ||||||    
T  5722241 tatagtgcttcttttttgaatcgatataggataacactaacaatgtttattttggatataatatagcactgatgatg 5722317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 22738101 - 22738165
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| |||||||||||||| ||||||| ||||| |||||||||||||||||    
T  22738101 tatagtgcttcttttttggatcgatatagtataacactaacaatgttccttttggatatagtata 22738165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 3701331 - 3701397
Alignment:
Q  246 agtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    ||||||||||||||| |||||||||||||| ||||||| ||||| ||||||||||||||||| ||||    
T  3701331 agtgcttcttttttggatcgatatagtataacactaacaatgttccttttggatatagtatagcact 3701397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 10657222 - 10657286
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||| ||||||||||||| |||||||||||||||||||||| ||||| | |||||||||||||||    
T  10657222 tataatgcttcttttttggatcgatatagtatagcactaacaatgttccgtttggatatagtata 10657286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 26691881 - 26691945
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| ||||||| |||||| ||||||| ||||| |||||||||||||||||    
T  26691881 tatagtgcttcttttttggatcgatagagtataacactaacaatgttccttttggatatagtata 26691945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 26961613 - 26961677
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| ||||||| |||||| ||||||| ||||| |||||||||||||||||    
T  26961613 tatagtgcttcttttttggatcgatagagtataacactaacaatgttccttttggatatagtata 26961677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 1921024 - 1921101
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtat-agcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||||||||||||||||| ||||||||| ||| | ||||||| ||| | |||||||||||||||||||||| ||||||    
T  1921024 tatagtgcttcttttttggatcgatataatattaacactaacaatgatccttttggatatagtatatcactgatgatg 1921101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 11694328 - 11694436
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| ||||||||| |||| |||||| |||| |||| |||||||||||| ||| | |||||||| |   | |||| |||||||||||| ||||    
T  11694328 aaataattatctgatacttcccgatacgtatcaagagaatatctgataattatcctgcaccgctacctgccccaatagttcccaattaatgttaa-taaa 11694426  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  11694427 ataacttaac 11694436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 21251734 - 21251795
Alignment:
Q  251 ttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||| ||||||||||||||||| |||| ||||| ||||||||||||||||| ||||    
T  21251734 ttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtatagcact 21251795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 27085613 - 27085682
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||||||||||| ||||||||| |||||||||||| |||||  ||||| |||||||||| ||||    
T  27085613 tatagtgcttcttttttggatcgatataatatagcactaacaatgttcattttgaatatagtatagcact 27085682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 18001958 - 18001851
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| ||||||| | |||| |||||| |||||||||||||||||||| | ||| |||||||| |||     |||  |||||||||||||||||    
T  18001958 aaataattatctgatactttccgatacgtatcaagagagtatccgataattatcatgcaccgatacctg-ctccaatattctcaattaatgttaactaaa 18001860  T
Q  227 ataacttaa 235  Q
    |||||||||    
T  18001859 ataacttaa 18001851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 30777264 - 30777188
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||||||||| ||||||  |||||||||||||| ||||||| |||||  ||||| ||||||||||||||| ||||||    
T  30777264 tatagtgcttattttttagatcgatatagtataacactaacaatgttctttttgaatatagtatatcactgatgatg 30777188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 11907555 - 11907624
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||||||||||| ||||||||| |||| ||| ||| ||||  ||||||||||||||||| ||||    
T  11907555 tatagtgcttcttttttggatcgatatattataacaccaacaatgtaccttttggatatagtataacact 11907624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 15066455 - 15066524
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||| ||||||||||||| ||| |||||||||| ||||||| ||||| |||| |||||||||||| ||||    
T  15066455 tataatgcttcttttttggatcaatatagtataacactaacaatgttcctttcggatatagtatagcact 15066524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 41233447 - 41233549
Alignment:
Q  139 gatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaac-g 237  Q
    ||||||||| |||| |||||||||||||||| |||||||||    ||  |||||||||| |   | |||| ||||||||||||||||||||||||||| |    
T  41233447 gatacttcccgatacgtatcaggagagtatctgataattat----catcgatacctgccccaatatttcccaattaatgttaactaaaataacttaactg 41233542  T
Q  238 ttgagta 244  Q
    |||||||    
T  41233543 ttgagta 41233549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 17138108 - 17138044
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| || |||||| |||||||||||| ||||| |||||| ||||| ||||    
T  17138108 tatagtgcttcttttttggattgatataatatagcactaacaatgttccttttgcatataatata 17138044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 30284464 - 30284392
Alignment:
Q  238 ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||| ||||||||||  |||||| |||||||||||||| ||||||| |||||  |||||||||||||||| ||||    
T  30284464 ttgaatatagtgctt--tttttggatcgatatagtataacactaacaatgttcattttggatatagtatagcact 30284392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 32624883 - 32624941
Alignment:
Q  17 cccgatattttaaaatggatgacgtatcgtattccttgtgtattttgcattgatacctg 75  Q
    |||||||||| ||||||||||||||| ||||| || ||||||| |||||| ||||||||    
T  32624883 cccgatatttcaaaatggatgacgtaccgtatcccctgtgtatcttgcatcgatacctg 32624941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 5722130 - 5722211
Alignment:
Q  155 tatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaac 236  Q
    |||||| ||||||| |||||||||||||||||| |||| |||| |   | |||| |||||||||| ||||||| ||||||||    
T  5722130 tatcagaagagtattcgataattatcctacacaaatacttgccccgatatttcccaattaatgttgactaaaaaaacttaac 5722211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 39690071 - 39690011
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | ||| ||||||||||||||    
T  39690071 tatagtgattcttttttggatcgatatagtataacactaac-aagttccttttggatatagt 39690011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 1639130 - 1639090
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaac 283  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  1639130 tatagtgcttcttttttggatcgatataatatagcactaac 1639090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 18001825 - 18001781
Alignment:
Q  238 ttgagtatagtgcttcttttttgaatcgatatagtatagcactaa 282  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||    
T  18001825 ttgaatatagtgcttcttttttggatcgataaagtatagcactaa 18001781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 6242886 - 6242820
Alignment:
Q  243 tatagtgcttcttttttgaatcgatata--gtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||  |||||||||  ||||| ||||||| |||||  ||||||||||||||||    
T  6242886 tatagtgcttcttttttagatcgatatatagtataacactaacaatgttctttttggatatagtata 6242820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 5612295 - 5612249
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtt 289  Q
    |||||||||||||||||  || ||||||||||||||||||| |||||    
T  5612295 tatagtgcttctttttttgattgatatagtatagcactaacaatgtt 5612249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 9792325 - 9792383
Alignment:
Q  17 cccgatattttaaaatggatgacgtatcgtattccttgtgtattttgcattgatacctg 75  Q
    ||||||| |||||||||||||||||| ||||| || |||||||  ||||| ||||||||    
T  9792325 cccgatactttaaaatggatgacgtaccgtatcccctgtgtatcctgcatcgatacctg 9792383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 5985800 - 5985755
Alignment:
Q  262 atcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||||| | ||||| |||||||||| ||||||    
T  5985800 atcgatatagtatagcactagcaatgttccttttggataaagtata 5985755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 9793074 - 9793134
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | |||  |||||||||||||    
T  9793074 tatagtgattcttttttggatcgatatagtatatcactaac-aagttcattttggatatagt 9793134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 34032626 - 34032667
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacg 284  Q
    |||||||||| ||||||| ||||||| |||||||||||||||    
T  34032626 tatagtgcttattttttggatcgataaagtatagcactaacg 34032667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 5721992 - 5722024
Alignment:
Q  16 gcccgatattttaaaatggatgacgtatcgtat 48  Q
    ||||||||||||||||| |||||||||||||||    
T  5721992 gcccgatattttaaaattgatgacgtatcgtat 5722024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 9729471 - 9729431
Alignment:
Q  262 atcgatatagtatagcactaacgatgtttcttttggatata 302  Q
    ||||||||||||||||| |||| ||||| ||||||||||||    
T  9729471 atcgatatagtatagcattaacaatgttccttttggatata 9729431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 12852896 - 12852928
Alignment:
Q  251 ttcttttttgaatcgatatagtatagcactaac 283  Q
    |||||||||| ||||||||||||||||||||||    
T  12852896 ttcttttttggatcgatatagtatagcactaac 12852928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 8e-52; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 127 - 313
Target Start/End: Original strand, 44156723 - 44156910
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||||| ||| |||||||| | |   |||||| |||||||||||||||||    
T  44156723 aaataattatccgatacttcctgatacgtatcaggatggtatccgataattatcctgcaccgatacctgacccaatacttcccaattaatgttaactaaa 44156822  T
Q  227 ataacttaac-gttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcactt 313  Q
    ||||||||||  ||||||||| ||||||||||||| ||||||||| ||||| |||||| ||||||||| ||||||||||||| |||||    
T  44156823 ataacttaactcttgagtataatgcttcttttttggatcgatataatatagaactaacaatgtttcttctggatatagtataacactt 44156910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 14824264 - 14824454
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||| |||  |||||| || |   |||||| |||||||||||| ||||    
T  14824264 aaataattatccgatatttcccgatacgtatcaggagagtatccgataattatcctgcaccaataccttccccaatacttcccaattaatgttaattaaa 14824363  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  ||||||||| ||||||||||||| |||||||||||||||||||||| |||||  |||||||||||||||| ||||||||    
T  14824364 ataacttaactcttgagtataatgcttcttttttggatcgatatagtatagcactaacaatgttctttttggatatagtatagcacttatg 14824454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 140 - 316
Target Start/End: Original strand, 5588176 - 5588353
Alignment:
Q  140 atacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaac-gt 238  Q
    |||||||||||||  ||||| |||||||||| ||||||||||||||| |||||||||| |  ||||||| |||||||||||||||||||||||||||  |    
T  5588176 atacttcctgatacatatcatgagagtatccaataattatcctacaccgatacctgccccaacacttcccaattaatgttaactaaaataacttaactct 5588275  T
Q  239 tgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    || ||||||||||| ||||||| ||||||||| |||| ||||||| |||||||||||| ||| |||||||||||||||    
T  5588276 tgcgtatagtgcttattttttggatcgatataatataacactaacaatgtttcttttgcatacagtatatcacttatg 5588353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 1005637 - 1005827
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| |||||||||||||| ||||||| |||||||| |||||||||||| |||  ||| ||||| |   |||||| |||||||||||| ||||    
T  1005637 aaataattatctgatacttcctgatacgtatcagaagagtatctgataattatcctgcaccaatatctgccccaatacttcccaattaatgttaattaaa 1005736  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  |||||||||||| |||||||||| |||||||||||||| ||||||| || || ||||||||||||||||| ||||||||    
T  1005737 ataacttaactcttgagtatagtgtttcttttttggatcgatatagtataacactaacaatattccttttggatatagtatagcacttatg 1005827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 168 - 316
Target Start/End: Original strand, 4355478 - 4355627
Alignment:
Q  168 tccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaacg-ttgagtatagtgcttcttttttgaatcga 266  Q
    ||||||||||||||||||| |||||||||| |   |||||| |||||||||||||||||||||||||||  ||||| ||||||||||||||||| |||||    
T  4355478 tccgataattatcctacactgatacctgccccaatacttcccaattaatgttaactaaaataacttaactcttgagaatagtgcttcttttttggatcga 4355577  T
Q  267 tatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  4355578 tatagtataacactaacaatgtttcttttggatatagtatagcacttatg 4355627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 4561914 - 4562104
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| | |||  ||||||| | |   |||||| |||||||||||  ||||    
T  4561914 aaataattatctgatacttcccgatacgtatcaggagagtatccgataattatcatgcaccaatacctgtcccaatacttcccaattaatgttacttaaa 4562013  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  ||||||||||||||||||||||| || ||||||||||| ||||||| ||||| |||||||||||||||||  |||||||    
T  4562014 ataacttaactcttgagtatagtgcttcttttttggattgatatagtatatcactaacaatgttccttttggatatagtatagtacttatg 4562104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 127 - 319
Target Start/End: Original strand, 3563965 - 3564158
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||| ||  |||||||||| |   |||||| |||||||||||| ||||    
T  3563965 aaataattatctgatacttcccgatacgtatcagaagagtatccgataattatcctgcatcgatacctgccacaatacttcccaattaatgttaagtaaa 3564064  T
Q  227 ataacttaac-gttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    ||||||||||  ||||||||||||  ||||||||| |||  |||||||||||| |||| ||| ||||||||||||||||||| || ||||||||    
T  3564065 ataacttaactcttgagtatagtgactcttttttggatcattatagtatagcattaacaatgcttcttttggatatagtataacagttatgatg 3564158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 24585662 - 24585851
Alignment:
Q  130 taattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgtt-aactaaaat 228  Q
    ||||||||| ||| ||| ||||| ||||||||||||||| ||||||||||||| |||  |||||||||     |||||| |||||||||| |||||||||    
T  24585662 taattatccaatatttcttgatacgtatcaggagagtattcgataattatcctgcactaatacctgccctaatacttcccaattaatgtttaactaaaat 24585761  T
Q  229 aacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttc-ttttggatatagtatatcacttatg 316  Q
    ||||||||  |||||||||||| |||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||    
T  24585762 aacttaactcttgagtatagtgattcttttttggatcgatatagtatagcactaacaatgtttctttttggatatagtatagcacttatg 24585851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 127 - 307
Target Start/End: Complemental strand, 8482910 - 8482729
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||  ||||  |||||| |||| |||||||||||||||| ||| ||||||||||||   |||||| ||| |||||||| ||||    
T  8482910 aaataattatccgatacttcgcgatacatatcagaagagcatccgataattatcctgcaccgatacctgcctcaatacttcccaatcaatgttaattaaa 8482811  T
Q  227 ataacttaac-gttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    ||||||||||  ||||||||| ||||||||||||| ||||||||| |||| || |||| ||||| |||||||||||||||||    
T  8482810 ataacttaactcttgagtataatgcttcttttttggatcgatataatataacattaacaatgttccttttggatatagtata 8482729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 127 - 316
Target Start/End: Complemental strand, 28746649 - 28746464
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| |||||| || |||||||||||||||     |||  ||||||||| |   | |||| |||||| ||||| ||||    
T  28746649 aaataattatccgatacttcccgatacgtatcaagaaagtatccgataatta-----cacctatacctgccccaataattcccaattaacgttaaataaa 28746555  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  |||| |||||| ||||||||||| |||||||||||||| || |||| ||||||||||||||||||||||| ||||||||    
T  28746554 ataacttaactcttgaatatagttcttcttttttggatcgatatagtataacaataacaatgtttcttttggatatagtatagcacttatg 28746464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 40431997 - 40431834
Alignment:
Q  144 ttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaacg-ttgag 242  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||| | |||||||| |   ||||   |||||||||| ||||||||||||||||  |||||    
T  40431997 ttcctgatacgtatcaggacagtatccgataattatcctgcaccgttacctgccccaatacttttcaattaatgtttactaaaataacttaactattgag 40431898  T
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    ||||||||| ||||||| | ||||||||||||| ||||||| ||||| |||||||||||||||||    
T  40431897 tatagtgctccttttttta-tcgatatagtataacactaacaatgttccttttggatatagtata 40431834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 34146305 - 34146414
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||| |||| ||||| |   |||||| |||||||||||||||||    
T  34146305 aaataattatccgatacttcctgatacgtatcaggagagtatccgataattattctgcactgatatctgccccgatacttcccaattaatgttaactaaa 34146404  T
Q  227 ataacttaac 236  Q
    |||| |||||    
T  34146405 ataatttaac 34146414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 315
Target Start/End: Complemental strand, 1776418 - 1776241
Alignment:
Q  138 cgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaacg 237  Q
    |||||||||| |||| ||||||| | |||||| |||||||||||| |||  ||||||||| |   | || | ||||||  |||| ||||||||||||||     
T  1776418 cgatacttcccgatacgtatcagaaaagtatctgataattatcctgcacctatacctgccccaataatttccaattaacattaaataaaataacttaact 1776319  T
Q  238 -ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttat 315  Q
     ||||||||||||||||||||||| ||||||||| | ||||||  || ||||||||||||||||||||||| |||||||    
T  1776318 cttgagtatagtgcttcttttttggatcgatataat-tagcacggacaatgtttcttttggatatagtataacacttat 1776241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 35342443 - 35342552
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctg-cacttcctaattaatgttaactaa 225  Q
    ||||||||||| ||||||||| |||| |||||||||||||||||||| |||||||||||||| || ||||| |||  |||||| ||||||||||||||||    
T  35342443 aaataattatctgatacttcccgatacgtatcaggagagtatccgatcattatcctacacaggtatctgcc-ctgatacttcccaattaatgttaactaa 35342541  T
Q  226 aataacttaac 236  Q
    |||||||||||    
T  35342542 aataacttaac 35342552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 14217143 - 14217034
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| ||||| |||| |   |||||| |||||||||||| ||||    
T  14217143 aaataattatccgatacttcccgatacgtatcaggagagtatccgataattatcctgcactgatacatgccccaatacttcccaattaatgttaagtaaa 14217044  T
Q  227 ataacttaac 236  Q
    || |||||||    
T  14217043 atgacttaac 14217034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 21104607 - 21104716
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    |||||||||||||||| ||||  ||| ||||||||| |||||||||| |||||||||||| |||| ||||| |   |||||| |||||||||||||||||    
T  21104607 aaataattatccgatatttccctatacgtatcaggaaagtatccgatcattatcctacaccgatatctgccccgatacttcccaattaatgttaactaaa 21104706  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  21104707 ataacttaac 21104716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 2319400 - 2319509
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctg-cacttcctaattaatgttaactaa 225  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||  |  |||| ||||| |||  |||||| ||||||||||||||||    
T  2319400 aaataattatccgatacgtcccgatacgtatcaggagagtatccgataattatcctggattgatatctgcc-ctgatacttcccaattaatgttaactaa 2319498  T
Q  226 aataacttaac 236  Q
    |||||||||||    
T  2319499 aataacttaac 2319509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 31236040 - 31235964
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||||||||||||||||  |||||||||||||| ||||||| ||||| |||||||||||||||||||| | ||||||    
T  31236040 tatagtgcttcttttttagatcgatatagtataacactaacaatgttccttttggatatagtatatcattgatgatg 31235964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 302
Target Start/End: Original strand, 5371339 - 5371398
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatata 302  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  5371339 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatata 5371398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 2319539 - 2319605
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatc 309  Q
    |||||||||||||||||| || ||||||||||| ||||||| ||||| |||||||||||||||||||    
T  2319539 tatagtgcttcttttttggattgatatagtataacactaacaatgttccttttggatatagtatatc 2319605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 31236179 - 31236070
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||| | ||||||||||| |||| |||||||||||||||| |||||||||||||||  |||| |||||||   | |||  | | |||||||||||||    
T  31236179 aaataatcagccgatacttcccgatacgtatcaggagagtatctgataattatcctacatcgatatctgcctcgatatttcacagtaaatgttaactaaa 31236080  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  31236079 ataacttaac 31236070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 12819579 - 12819643
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| ||||||||||||||||| |||| || || |||||||||||||||||    
T  12819579 tatagtgcttcttttttggatcgatatagtatagcattaacaatattccttttggatatagtata 12819643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 20537114 - 20537167
Alignment:
Q  254 ttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    ||||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  20537114 ttttttggatcgatatagtatagcactaacaatgttccttttggatatagtata 20537167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 236
Target Start/End: Original strand, 12206150 - 12206258
Alignment:
Q  128 aataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaa 227  Q
    |||||||||||||||  |   |||| |||||| |||||||||||||||||||||| ||| ||||  |||| |   |||||| |||||||| |||||||||    
T  12206150 aataattatccgataaatttcgatacgtatcatgagagtatccgataattatcctgcactgatatatgccccgatacttcccaattaatggtaactaaaa 12206249  T
Q  228 taacttaac 236  Q
    |||||||||    
T  12206250 taacttaac 12206258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 35342581 - 35342657
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    ||||||| |||||||||  |||||||||||||| ||||||| ||||| |||||||||||| |||| |||| ||||||    
T  35342581 tatagtgtttcttttttagatcgatatagtataacactaacaatgttccttttggatataatataacactgatgatg 35342657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 45159030 - 45158966
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||  |||||||||||||||||||||  |||||  ||||||||||||||||    
T  45159030 tatagtgcttcttttttagatcgatatagtatagcactaaaaatgttctttttggatatagtata 45158966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 3545572 - 3545465
Alignment:
Q  128 aataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaa 227  Q
    |||||||||| ||| ||||| ||||  ||||| ||||||||| |||||||||| | ||| |||| || || |   ||||||||||||||||||| |||||    
T  3545572 aataattatcagatgcttcccgatacatatcaagagagtatctgataattatcatgcactgatatcttccccaaaacttcctaattaatgttaattaaaa 3545473  T
Q  228 taacttaa 235  Q
    ||||||||    
T  3545472 taacttaa 3545465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 3545416 - 3545359
Alignment:
Q  262 atcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||||||||||||||||||||  || |||||||||||||||||||| |||| ||||||    
T  3545416 atcgatatagtatagcactaataatatttcttttggatatagtataccactgatgatg 3545359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 6497013 - 6496953
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||||||||||| ||||||||||||||| |||||| | ||| ||||||||||||||    
T  6497013 tatagtgcttcttttttggatcgatatagtataggactaac-aagttccttttggatatagt 6496953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 18301362 - 18301423
Alignment:
Q  246 agtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    ||||||||||||||| ||||||||| |||||||||| | ||||| |||||||||||| ||||    
T  18301362 agtgcttcttttttggatcgatataatatagcactagcaatgttccttttggatataatata 18301423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 22485045 - 22485105
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  22485045 tatagtgattcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 22485105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 40308178 - 40308118
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  40308178 tatagtgattcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 40308118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 18300989 - 18301080
Alignment:
Q  28 aaaatggatgacgtatcgtattccttgtgtattttgcattgatacctgtctgattc----cgatacgtatcgagagggtatccgaagattaa 115  Q
    ||||||||||||||||||||| || |||||||| ||||  |||||||||||||| |    |||||||||||| ||| |||||| || |||||    
T  18300989 aaaatggatgacgtatcgtatcccctgtgtattctgcaccgatacctgtctgatacttctcgatacgtatcgggagagtatccaaatattaa 18301080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 299
Target Start/End: Original strand, 21104742 - 21104803
Alignment:
Q  238 ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggat 299  Q
    |||| ||||||||||| |||||| |||||||||||||| ||||||| || || |||||||||    
T  21104742 ttgaatatagtgcttcatttttgtatcgatatagtatatcactaacaatattccttttggat 21104803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 35996767 - 35996816
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataat 176  Q
    ||||||||||||||||||||| |||| ||||||||| ||||| |||||||    
T  35996767 aaataattatccgatacttcccgatacgtatcaggaaagtattcgataat 35996816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 34146444 - 34146508
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||| ||||| ||||||  || |||||||||||||||||||  |||| |||||||||||||||||    
T  34146444 tataatgcttattttttagattgatatagtatagcactaacagtgttccttttggatatagtata 34146508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 4561805 - 4561836
Alignment:
Q  28 aaaatggatgacgtatcgtattccttgtgtat 59  Q
    ||||||||||||||||||||||||||||||||    
T  4561805 aaaatggatgacgtatcgtattccttgtgtat 4561836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 1776548 - 1776446
Alignment:
Q  17 cccgatattttaaaatggatgacgtatcgtattccttgtgtattttgcattgatacctgtctga----ttccgatacgtatcgagagggtatccgaagat 112  Q
    ||||||| || ||||||| ||||||||||||| ||||| ||||| ||||  |||||||| | ||    ||||||||||||||   || ||||||||||||    
T  1776548 cccgatacttcaaaatggttgacgtatcgtatcccttgcgtattctgcaccgatacctgcccgatcatttccgatacgtatcagaagagtatccgaagat 1776449  T
Q  113 taa 115  Q
    |||    
T  1776448 taa 1776446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 44156603 - 44156705
Alignment:
Q  17 cccgatattttaaaatggatgacgtatcgtattccttgtgtattttgcattgatacctgtctga----ttccgatacgtatcgagagggtatccgaagat 112  Q
    ||||||| || |||||||||||| |||||||| || || ||||  ||||| ||||| |||||||    | ||||||||||||  ||| ||||||||||||    
T  44156603 cccgatacttcaaaatggatgacatatcgtatcccctgcgtatcatgcatcgatacatgtctgatacttcccgatacgtatcaggagagtatccgaagat 44156702  T
Q  113 taa 115  Q
    |||    
T  44156703 taa 44156705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 4355333 - 4355389
Alignment:
Q  19 cgatattttaaaatggatgacgtatcgtattccttgtgtattttgcattgatacctg 75  Q
    ||||| || |||||||||||||||||||||||| || ||||| ||||  ||||||||    
T  4355333 cgatacttcaaaatggatgacgtatcgtattccctgcgtattctgcaccgatacctg 4355389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 6124949 - 6124989
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaac 283  Q
    ||||||| |||||||||| |||||||||||||| |||||||    
T  6124949 tatagtgattcttttttggatcgatatagtataacactaac 6124989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 7807197 - 7807157
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaac 283  Q
    ||||||| |||||||||| |||||||||||||| |||||||    
T  7807197 tatagtgattcttttttggatcgatatagtataacactaac 7807157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 45159410 - 45159362
Alignment:
Q  17 cccgatattttaaaatggatgacgtatcgtattccttgtgtattttgca 65  Q
    ||||||| || ||||||||||||||||||||| ||||| |||| |||||    
T  45159410 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcttgca 45159362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 3e-51; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 19128278 - 19128468
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||  ||  ||||| |   | |||| |||||| ||||| ||||    
T  19128278 aaataattatccgatacttcccgatacgtatcaggaaagtatccgataattatccttcacctatgtctgccccgataattcccaattaacgttaaataaa 19128377  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  19128378 ataacttaactcttgagtatagtgcttcttttttggatcgatatagtatagcactaacaatgtttcttttggatatagtataacacttatg 19128468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 234434 - 234624
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||||||||||| |  |   ||||||||| |   | || | |||||| ||||| ||||    
T  234434 aaataattatccgatacttcccgatatgtttcaggaaagtatccgataattatcttgaatctatacctgccccaataatttccaattaacgttaaataaa 234533  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  234534 ataacttaactcttgagtatagtgcttcttttttggatcgatatagtatagcactgacaatgtttcttttggatatagtataacacttatg 234624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 149 - 319
Target Start/End: Original strand, 27084121 - 27084292
Alignment:
Q  149 gatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaacg-ttgagtatag 247  Q
    |||| ||||||||| | |||| |||||||||  | ||| |||| ||||| |   |||||| |||||||||||||||||||||||||||  ||||||||||    
T  27084121 gatacgtatcaggaaaatatctgataattattttgcactgataactgcccccatacttcccaattaatgttaactaaaataacttaactcttgagtatag 27084220  T
Q  248 tgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||| |||||||||||    
T  27084221 tgcttcttttttgaatcgatatagtatagaactaacaatgttcctttcggatatagtataacacttatgatg 27084292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 10894509 - 10894403
Alignment:
Q  130 taattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaata 229  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||||||||||| ||| ||||||| || |   | |||| |||||||||||||||||||     
T  10894509 taattattcgatacttcctaatacgtatcaggagagtatccgataattatcctgcaccgatacctaccccgatatttcccaattaatgttaactaaaatt 10894410  T
Q  230 acttaac 236  Q
    |||||||    
T  10894409 acttaac 10894403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 10894373 - 10894304
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||| ||||    
T  10894373 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtatagcact 10894304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 128 - 236
Target Start/End: Original strand, 7255047 - 7255155
Alignment:
Q  128 aataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaa 227  Q
    |||||||||| ||||||||| |||| |||||||||||||||||||||| |||| | ||| |||||||||| |   | || | |||||||||||||| |||    
T  7255047 aataattatctgatacttcccgatacgtatcaggagagtatccgataagtatcatgcaccgatacctgccccgatattttccaattaatgttaacttaaa 7255146  T
Q  228 taacttaac 236  Q
    |||||||||    
T  7255147 taacttaac 7255155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 31740556 - 31740492
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||| ||||    
T  31740556 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatataatata 31740492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 13607778 - 13607670
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||  ||||||||| |||| ||||||||| |||||  |||||||||||||||| |||||||||| |   | ||   |||||||||||||||||    
T  13607778 aaataattatatgatacttcccgatacgtatcaggatagtatatgataattatcctacaccgatacctgccccaatatttttcaattaatgttaactaaa 13607679  T
Q  227 ataacttaa 235  Q
    |||||||||    
T  13607678 ataacttaa 13607670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 6708034 - 6707925
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| ||||  |||||| ||||||| ||||||||| ||  ||| |||||||||| |   | | || |||||||||| ||||||    
T  6708034 aaataattatccgatacttcccgatacttatcagaagagtattcgataattacccagcaccgatacctgccccgttattccccaattaatgttgactaaa 6707935  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  6707934 ataacttaac 6707925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 251 - 312
Target Start/End: Complemental strand, 22988972 - 22988911
Alignment:
Q  251 ttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||| |||||||||||||||||||||| ||||| |||||||||| |||||| ||||    
T  22988972 ttcttttttggatcgatatagtatagcactaacaatgttccttttggatacagtataacact 22988911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 23799424 - 23799485
Alignment:
Q  251 ttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||| |||||||||||||||||||||| ||||| |||||||||| |||||| ||||    
T  23799424 ttcttttttggatcgatatagtatagcactaacaatgttccttttggatacagtataacact 23799485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 31079727 - 31079796
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgc 196  Q
    ||||||||||| ||||||||| |||| |||||||||||||||||||| |||||| | ||| |||||||||    
T  31079727 aaataattatctgatacttcccgatacgtatcaggagagtatccgatgattatcatgcaccgatacctgc 31079796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 3212833 - 3212909
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    |||||||||| ||||||  |||||||||||||| ||||||| |||||  ||||| ||||||||||||||| ||||||    
T  3212833 tatagtgcttattttttagatcgatatagtataacactaacaatgttctttttgaatatagtatatcactgatgatg 3212909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 32130399 - 32130335
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| ||| ||||||||||||| |||| ||||| |||||||||| ||||||    
T  32130399 tatagtgcttcttttttggatcaatatagtatagcattaacaatgttccttttggataaagtata 32130335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 236
Target Start/End: Complemental strand, 13045359 - 13045260
Alignment:
Q  137 ccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaac 236  Q
    ||||||||| |||||| ||||||||||| |||| ||||| |||||| ||| |||| ||||| |   | |||| ||||||||| |||||||||||||||||    
T  13045359 ccgatactttctgataagtatcaggagaatatctgataactatcctgcaccgatatctgccccaatatttcccaattaatgtcaactaaaataacttaac 13045260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 7255185 - 7255255
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaac-gatgtttcttttggatatagtatatcact 312  Q
    |||||||||||||||||| |||||||||||||| || ||||  ||||| ||||||||||||||||| ||||    
T  7255185 tatagtgcttcttttttggatcgatatagtataacattaacaaatgttccttttggatatagtatagcact 7255255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 7188119 - 7188059
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  7188119 tatagtgattcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 7188059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 13061228 - 13061159
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    ||||| |||||||||||| ||||||||||||||||||||| ||| || || |||| ||||||||| ||||    
T  13061228 tatagcgcttcttttttggatcgatatagtatagcactaatgatcttcctcttgggtatagtataacact 13061159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 31195691 - 31195631
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  31195691 tatagtgattcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 31195631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 13045227 - 13045172
Alignment:
Q  251 ttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtat 306  Q
    |||||||||| || ||||||||||| |||||||||| || ||||||||||||||||    
T  13045227 ttcttttttggattgatatagtataacactaacgatcttccttttggatatagtat 13045172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 3212483 - 3212525
Alignment:
Q  17 cccgatattttaaaatggatgacgtatcgtattccttgtgtat 59  Q
    ||||||| || ||||||||||||||||||||||||||||||||    
T  3212483 cccgatacttcaaaatggatgacgtatcgtattccttgtgtat 3212525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 26327279 - 26327349
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcc 197  Q
    ||||||||||||||||||||| ||||  |||| | ||||||| |||| |||||||| ||| ||||||||||    
T  26327279 aaataattatccgatacttcccgatacttatctgaagagtattcgatgattatcctgcaccgatacctgcc 26327349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 26327559 - 26327628
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||||||||||| ||| |||||||||| ||||||| ||||   |||| ||||||||||| ||||    
T  26327559 tatagtgcttcttttttggatcaatatagtataacactaacaatgtacattttagatatagtataacact 26327628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 13061355 - 13061259
Alignment:
Q  139 gatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaa 235  Q
    ||||||| |||||| |||| ||||||||||| ||||| |||| | ||   ||||||||| | | | |||| ||||||| ||||||||||||||||||    
T  13061355 gatactttctgatacgtattaggagagtatctgataactatcttgcagcaatacctgccccagtatttcccaattaatattaactaaaataacttaa 13061259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 13607632 - 13607568
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| |||||| ||||||| |||| || || ||||||||| ||||| ||||    
T  13607632 tatagtgcttcttttttggatcgatttagtataacacttacaatttttcttttgaatataatata 13607568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 32018360 - 32018424
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    ||||||| |||||||||  || ||||||||||| ||||||| |||||  ||||||||||||||||    
T  32018360 tatagtgtttcttttttagattgatatagtataacactaacaatgttctttttggatatagtata 32018424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 1036156 - 1036096
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | |||  |||||||||||||    
T  1036156 tatagtgattcttttttggatcgatatagtatatcactaac-aagttcattttggatatagt 1036096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 6707883 - 6707830
Alignment:
Q  254 ttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    ||||||| ||| |||||||||| ||||||| |||||  ||||||||||||||||    
T  6707883 ttttttggatcaatatagtataacactaacaatgttcattttggatatagtata 6707830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 11105554 - 11105610
Alignment:
Q  246 agtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatata 302  Q
    ||||||||| ||||| || ||||||||||| ||||||| |||||  |||||||||||    
T  11105554 agtgcttctcttttggattgatatagtataacactaacaatgttcattttggatata 11105610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 149 - 307
Target Start/End: Original strand, 42229811 - 42229970
Alignment:
Q  149 gatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaacg-ttgagtatag 247  Q
    |||| ||||||||||||||||||||||||||||| |||  ||||||||| |   |||||| |||||||||||| ||||||||||||||  |||||||||     
T  42229811 gatacgtatcaggagagtatccgataattatcctgcaccaatacctgccccaatacttcccaattaatgttaattaaaataacttaactcttgagtatat 42229910  T
Q  248 tgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||||||||||||||||||||| || || |||||||||||||||||    
T  42229911 tgcttcttttttgaatcgatatagtatagcactaacaatattccttttggatatagtata 42229970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 127 - 316
Target Start/End: Complemental strand, 22289714 - 22289524
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||| ||| ||||||| || ||| |||||||||||||||| |||||||||| |  || ||||||||||     |||||| |||||||||||||||||    
T  22289714 aaataatcatctgatactttctaatacgtatcaggagagtatctgataattatcatgtaccgatacctgccctaatacttcccaattaatgttaactaaa 22289615  T
Q  227 ataacttaacgtt-gagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    |||||||||| || | ||||||||||||||||||| |||||||||||| | ||||||| ||||||||||||||||||||||| ||||||||    
T  22289614 ataacttaacttttgggtatagtgcttcttttttggatcgatatagtacaacactaacaatgtttcttttggatatagtataacacttatg 22289524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 131 - 319
Target Start/End: Original strand, 2122838 - 2123027
Alignment:
Q  131 aattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataa 230  Q
    ||||||| ||||||||  |||| ||||||| ||| ||||||||||||||||| ||| | ||||||||||   |||| | |||||||||||||||||||||    
T  2122838 aattatctgatacttcgcgatacgtatcagtagactatccgataattatcctgcactggtacctgcctcaatactttccaattaatgttaactaaaataa 2122937  T
Q  231 cttaac-gttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatgatg 319  Q
    ||||||  ||||||||||||||||| |||| |||| | ||||||||  |||||| || ||||||||||||||| |||| |||||||||||    
T  2122938 cttaactcttgagtatagtgcttctatttttaatcaaaatagtataagactaacaatctttcttttggatataatataacacttatgatg 2123027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 127 - 282
Target Start/End: Complemental strand, 41742065 - 41741909
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||| ||| ||||| |||| |   |||||| |||||||||||| ||||    
T  41742065 aaataattatccggtacttcccgatacgtatcaggagagtatccgataattatcctgcactgatacatgccccaatacttcccaattaatgttaagtaaa 41741966  T
Q  227 ataacttaac-gttgagtatagtgcttcttttttgaatcgatatagtatagcactaa 282  Q
    ||||||||||  |||||||||||| |||||||||  ||||||||||||||| |||||    
T  41741965 ataacttaactcttgagtatagtgtttcttttttagatcgatatagtatagtactaa 41741909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 128 - 316
Target Start/End: Complemental strand, 19349596 - 19349407
Alignment:
Q  128 aataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaa 227  Q
    ||||||||| |||||||||| |||| ||||||||| || |||||||||||||||| ||    |||||||| |   | ||   |||||| ||||| |||||    
T  19349596 aataattattcgatacttcccgatacgtatcaggaaagaatccgataattatcctgcatctttacctgccccaataattttcaattaacgttaaataaaa 19349497  T
Q  228 taacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||| |||||  ||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  19349496 taatttaactcttgagtatagtgcttcttttttggatcgatatagtatagcactgacaatgtttcttttggatatagtataacacttatg 19349407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 139 - 312
Target Start/End: Original strand, 29915929 - 29916103
Alignment:
Q  139 gatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaacg- 237  Q
    ||||||||| |||| ||||||||| |||||| |||||||||||| ||  ||||| |||| |   |||||| |||||||||||||||||||||||||||      
T  29915929 gatacttcccgatacgtatcaggatagtatctgataattatcctgcatcgatacatgccccaatacttcccaattaatgttaactaaaataacttaactc 29916028  T
Q  238 ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    || |||||||||||||| ||||  |||||||||||||| ||||||| |||||  |||||||||||||||| ||||    
T  29916029 tttagtatagtgcttctgttttagatcgatatagtataacactaacaatgttcattttggatatagtataacact 29916103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 139 - 312
Target Start/End: Original strand, 29965082 - 29965256
Alignment:
Q  139 gatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaataacttaacg- 237  Q
    ||||||||| |||| ||||||||| |||||| |||||||||||| ||  ||||| |||| |   |||||| |||||||||||||||||||||||||||      
T  29965082 gatacttcccgatacgtatcaggatagtatctgataattatcctgcatcgatacatgccccaatacttcccaattaatgttaactaaaataacttaactc 29965181  T
Q  238 ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    || |||||||||||||| ||||  |||||||||||||| ||||||| |||||  |||||||||||||||| ||||    
T  29965182 tttagtatagtgcttctgttttagatcgatatagtataacactaacaatgttcattttggatatagtataacact 29965256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 45347423 - 45347610
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    |||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| |||  ||| ||||| |   | |||  |||||| ||||| ||||    
T  45347423 aaataattatccgatacttcctgatacgtatcaggaaagtatctgataattatcctgcacctatatctgccccaataattctcaattaacgttaaataaa 45347522  T
Q  227 ataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    |||||||||   ||||||||||||||| ||||||| |||||||||||||||| || || |||||||||||||  |||||||| ||||||||    
T  45347523 ataacttaaatcttgagtatagtgctt-ttttttggatcgatatagtatagcccttacaatgtttcttttgg--atagtataacacttatg 45347610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 21157722 - 21157613
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||| | |||||||| |   | |||| |||||||||||| ||||    
T  21157722 aaataattatccgatacttcctgatacgtatcaggagagtatctgataattatcctgcaccgctacctgccccgatagttcccaattaatgttaattaaa 21157623  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  21157622 ataacttaac 21157613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 25700886 - 25700995
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| |||  ||||| |   |||||| |||||||||| ||||||    
T  25700886 aaataattatccgatacttcccgatacgtatcaggagagtatccgataattatcctgcactgatgtctgccccgatacttcccaattaatgtttactaaa 25700985  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  25700986 ataacttaac 25700995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 223 - 316
Target Start/End: Original strand, 39664636 - 39664730
Alignment:
Q  223 taaaataacttaacg-ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcacttatg 316  Q
    ||||||||||||||  ||||||||||||||||||||||| || ||||||||||| |||| || ||||||||||||||||||||||| ||||||||    
T  39664636 taaaataacttaactcttgagtatagtgcttcttttttgtattgatatagtataacactgacaatgtttcttttggatatagtatagcacttatg 39664730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 7899711 - 7899602
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| ||||| |||||||||| ||| ||||||||| || |||| ||||| |   |||||| |||||||||||||||||    
T  7899711 aaataattatccgatacttcccgatacgtatcgggagagtatctgatcattatcctatactgatatctgccccgatacttcccaattaatgttaactaaa 7899612  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  7899611 ataacttaac 7899602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 47642131 - 47642240
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| ||||||||| |||| |||||||||||||||||||| |||||||||||||  || ||||| |   |||| | |||||||||||||||||    
T  47642131 aaataattatctgatacttcccgatacgtatcaggagagtatccgatcattatcctacacaagtatctgccccgatactttccaattaatgttaactaaa 47642230  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  47642231 ataacttaac 47642240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 128 - 236
Target Start/End: Complemental strand, 30787553 - 30787445
Alignment:
Q  128 aataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaaa 227  Q
    ||||||||||| |||||||| ||||  |||||||||||||||||||||||||| | ||| |||| ||||| |   |||||| ||||||||||||||||||    
T  30787553 aataattatcctatacttcccgatacatatcaggagagtatccgataattatcatgcactgatatctgccccgatacttcccaattaatgttaactaaaa 30787454  T
Q  228 taacttaac 236  Q
    |||||||||    
T  30787453 taacttaac 30787445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 28968635 - 28968745
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagt-atccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaa 225  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||||||||  | || ||||| |   |||||| ||||||||||||||||    
T  28968635 aaataattatccgatacttcccgatacgtatcaggagagtaatccgatcattatcctacatcggtatctgccccgatacttcccaattaatgttaactaa 28968734  T
Q  226 aataacttaac 236  Q
    |||||||||||    
T  28968735 aataacttaac 28968745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 236
Target Start/End: Complemental strand, 45057284 - 45057185
Alignment:
Q  137 ccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctg-cacttcctaattaatgttaactaaaataacttaa 235  Q
    ||||||||||| |||| |||||| |||||||| |||||||||||||||||||||| ||||| |||  | |||| ||||||||||||||||||||||||||    
T  45057284 ccgatacttcccgatacgtatcatgagagtattcgataattatcctacacagatatctgcc-ctgatatttcccaattaatgttaactaaaataacttaa 45057186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 55269009 - 55268901
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||||||||||||| |||| | ||||||| ||||||||||||||||||| ||  |||| |||||     |||||| |||||||||||||||||    
T  55269009 aaataattatccgatacttcccgatacgcatcaggatagtatccgataattatcctgcattgatatctgccatgatacttcccaattaatgttaactaaa 55268910  T
Q  227 ataacttaa 235  Q
    |||||||||    
T  55268909 ataacttaa 55268901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 6134375 - 6134266
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctg-cacttcctaattaatgttaactaa 225  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| ||  ||||| |||| |||  | |||| |||||||||| |||||    
T  6134375 aaataattatccgatacttcccgatatttatcaggagagtattcgataattatcctgcatcgatacatgcc-ctgttatttcccaattaatgttgactaa 6134277  T
Q  226 aataacttaac 236  Q
    |||||||||||    
T  6134276 aataacttaac 6134266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 19879096 - 19878986
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctg-cacttcctaattaatgttaactaa 225  Q
    ||||||||||||||||||||| |||| |||||| |||||||| ||||||||||||| ||| | | |||||| | |  | |||| ||||||||||||||||    
T  19879096 aaataattatccgatacttcccgatacgtatcatgagagtattcgataattatcctgcaccgctgcctgcccccgatagttcccaattaatgttaactaa 19878997  T
Q  226 aataacttaac 236  Q
    |||||||||||    
T  19878996 aataacttaac 19878986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 22311107 - 22311171
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||    
T  22311107 tatagtgcttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtata 22311171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 30787415 - 30787351
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||| ||||| |||||||||||    
T  30787415 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttagatatagtata 30787351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 13353049 - 13352982
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatca 310  Q
    |||||||||||||||||| ||||| | |||||||||||||| ||||| ||||||||||||||||||||    
T  13353049 tatagtgcttcttttttggatcgacacagtatagcactaacaatgttccttttggatatagtatatca 13352982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 19421544 - 19421650
Alignment:
Q  130 taattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctg-cacttcctaattaatgttaactaaaat 228  Q
    |||||||||||||||||| |||| |||||||||| ||||  |||||||||||| ||| |||||||||| |||  | |||| ||||||||||||| |||||    
T  19421544 taattatccgatacttcccgatacgtatcaggagcgtatatgataattatcctgcaccgatacctgcc-ctgatatttcccaattaatgttaaccaaaat 19421642  T
Q  229 aacttaac 236  Q
    ||||||||    
T  19421643 aacttaac 19421650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 38889079 - 38888970
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||  ||||||||| |||  ||||||||||||||||||||||||||||| | |  ||||||||| |   | |||  |||||||||||||||||    
T  38889079 aaataattatttgatacttcccgatgcgtatcaggagagtatccgataattatcctgctctaatacctgccccgatatttctcaattaatgttaactaaa 38888980  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  38888979 ataacttaac 38888970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 28882420 - 28882356
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    ||||||||||||||||   ||||||||||||||||| |||| |||||||||||||||||||||||    
T  28882420 tatagtgcttctttttatgatcgatatagtatagcattaacaatgtttcttttggatatagtata 28882356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 35390127 - 35390191
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||| |||||||||||||| || |||| ||||| |||||||||||||||||    
T  35390127 tatagtgcttcttttttggatcgatatagtataacattaacaatgttccttttggatatagtata 35390191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 20510010 - 20509943
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatca 310  Q
    |||||||||||||||||| ||||| |||||||| ||||||| |||||  |||||||||||||||||||    
T  20510010 tatagtgcttcttttttggatcgacatagtataacactaacaatgttcattttggatatagtatatca 20509943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 260
Target Start/End: Complemental strand, 13748441 - 13748307
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| ||||||||| |||| ||||||| | ||||||||||||||||| |  ||  ||||||||| |   | || | |||||| ||||| ||||    
T  13748441 aaataattatctgatacttcccgatacgtatcagaaaagtatccgataattatcatgtacctatacctgccccaataatttccaattaacgttaaataaa 13748342  T
Q  227 ataacttaac-gttgagtatagtgcttcttttttg 260  Q
    |||| |||||  |||||||||||||||||||||||    
T  13748341 ataatttaactcttgagtatagtgcttcttttttg 13748307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 7899573 - 7899504
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    ||||||||||||  |||| |||||||||||||||||||| | ||||||||||||||| ||||||| ||||    
T  7899573 tatagtgcttctcgtttggatcgatatagtatagcactagcaatgtttcttttggatgtagtataacact 7899504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 20510149 - 20510040
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctgcacttcctaattaatgttaactaaa 226  Q
    ||||||||||| ||||||||| ||||  |||||| | ||||| ||||||||||||| ||  |||||||||| |   | |||| |||||||||| ||||||    
T  20510149 aaataattatctgatacttcccgatacttatcagaaaagtattcgataattatcctgcatcgatacctgccccaatatttcccaattaatgttgactaaa 20510050  T
Q  227 ataacttaac 236  Q
    ||||||||||    
T  20510049 ataacttaac 20510040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 22610617 - 22610557
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  22610617 tatagtgcttcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 22610557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 25936419 - 25936359
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  25936419 tatagtgcttcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 25936359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 48333212 - 48333273
Alignment:
Q  251 ttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||| |||||||||||||||||||||| || || ||||||||||||||||| ||||    
T  48333212 ttcttttttggatcgatatagtatagcactaacaatattccttttggatatagtataacact 48333273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 48334155 - 48334211
Alignment:
Q  251 ttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||| |||||||||||||||||||||| |||||  ||||||||||||||||    
T  48334155 ttcttttttggatcgatatagtatagcactaacaatgttctttttggatatagtata 48334211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 52684591 - 52684655
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||  |||||||||||||| ||||||| |||||  ||||||||||||||||    
T  52684591 tatagtgcttcttttttagatcgatatagtataacactaacaatgttctttttggatatagtata 52684655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 983202 - 983302
Alignment:
Q  19 cgatattttaaaatggatgacgtatcgtattccttgtgtattttgcattgatacctgtctga----ttccgatacgtatcgagagggtatccgaagatta 114  Q
    ||||| || ||||||||||||||||||||| || ||||||||||||| ||||| ||||||||    | ||||||||||||  ||| |||||| |||||||    
T  983202 cgataattcaaaatggatgacgtatcgtatcccctgtgtattttgcactgatatctgtctgatacttcccgatacgtatcaggagagtatccaaagatta 983301  T
Q  115 a 115  Q
    |    
T  983302 a 983302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 302
Target Start/End: Original strand, 19421680 - 19421739
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatata 302  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| ||| || |||||    
T  19421680 tatagtgcttcttttttgaatcgatatagtataacactaacaatgttccttatgaatata 19421739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 39664082 - 39664136
Alignment:
Q  128 aataattatccgatacttcctgatatgtatcaggagagtatccgataattatcct 182  Q
    |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||    
T  39664082 aataattatctgatacttcccgatacgtatcaggaaagtatccgataattatcct 39664136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 37996631 - 37996571
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  37996631 tatagtgattcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 37996571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 45057155 - 45057086
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||| ||||| ||||||| |||||||||||| | ||||||| |||||||||||| |||||||||| ||||    
T  45057155 tataatgcttattttttggatcgatatagtacaacactaacaatgtttcttttgtatatagtatagcact 45057086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 13353182 - 13353079
Alignment:
Q  133 ttatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagatacctgcctctg-cacttcctaattaatgttaactaaaataac 231  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||| ||||| ||  |||| | | ||| |  |||||  ||||||||||||||||||||||    
T  13353182 ttatctgatacttcccgatacgtatcaggagagtatccgataataatcctgcatcgatagc-gactccgatacttcggaattaatgttaactaaaataac 13353084  T
Q  232 ttaac 236  Q
    |||||    
T  13353083 ttaac 13353079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 21006217 - 21006153
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||| ||||||||||||  |||||||||||||| ||||||| |||||  ||||||||||||||||    
T  21006217 tataatgcttcttttttagatcgatatagtataacactaacaatgttctttttggatatagtata 21006153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 50287087 - 50287023
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    ||||||| |||||||||| |||||||||||||||||  ||  ||||| |||||||||||||||||    
T  50287087 tatagtgtttcttttttggatcgatatagtatagcatcaataatgttccttttggatatagtata 50287023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 52121539 - 52121603
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||  ||||||| ||||||||| |||||||||||| ||||| ||||||||| |||||||    
T  52121539 tatagtgctctttttttggatcgatataatatagcactaacaatgttccttttggatgtagtata 52121603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 25701046 - 25701096
Alignment:
Q  262 atcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||||| ||||    
T  25701046 atcgatatagtataacactaacaatgttccttttggatatagtatagcact 25701096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 7328002 - 7328062
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | ||| ||||||||||||||    
T  7328002 tatagtgattcttttttggatcgatatagtataacactaac-aagttccttttggatatagt 7328062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 28548296 - 28548357
Alignment:
Q  251 ttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||| |||||||||| ||||||||||| |||||  ||||| |||||| ||||||||    
T  28548296 ttcttttttggatcgatatagcatagcactaacaatgttctttttgaatatagcatatcact 28548357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 28968770 - 28968839
Alignment:
Q  238 ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||| ||||||| |||||||||  ||||||||| |||| ||||||| |||||  ||||||||||||||||    
T  28968770 ttgaatatagtgtttcttttttagatcgatataatataacactaacaatgttcattttggatatagtata 28968839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 45532403 - 45532343
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||||||||||| || |||||| |||||||||||| | ||| ||||||||||||||    
T  45532403 tatagtgcttcttttttggattgatataatatagcactaac-aagttccttttggatatagt 45532343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 47642265 - 47642334
Alignment:
Q  238 ttgagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||| ||||| | |||||||||  |||||||||||||| ||||||| |||||  ||||||||||||||||    
T  47642265 ttgaatatagcgtttcttttttagatcgatatagtataacactaacaatgttctttttggatatagtata 47642334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 1528811 - 1528851
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaac 283  Q
    ||||||| |||||||||| ||||||||||||||||||||||    
T  1528811 tatagtgattcttttttggatcgatatagtatagcactaac 1528851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 21157582 - 21157536
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtt 289  Q
    |||||||||||||||||  || ||||||||||||||||||| |||||    
T  21157582 tatagtgcttctttttttgattgatatagtatagcactaacaatgtt 21157536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 172
Target Start/End: Complemental strand, 6134432 - 6134399
Alignment:
Q  139 gatacttcctgatatgtatcaggagagtatccga 172  Q
    ||||||||| ||||||||||||||||||||||||    
T  6134432 gatacttcccgatatgtatcaggagagtatccga 6134399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 312
Target Start/End: Complemental strand, 19878948 - 19878887
Alignment:
Q  251 ttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatatcact 312  Q
    |||||||||| ||||||||| |||| ||||||| || || |||||||||||| |||| ||||    
T  19878948 ttcttttttggatcgatataatatatcactaacaatattccttttggatatattatagcact 19878887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 172
Target Start/End: Complemental strand, 22289771 - 22289738
Alignment:
Q  139 gatacttcctgatatgtatcaggagagtatccga 172  Q
    |||||||||||||| |||||||||||||||||||    
T  22289771 gatacttcctgatacgtatcaggagagtatccga 22289738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 42229740 - 42229781
Alignment:
Q  137 ccgatacttcctgatatgtatcaggagagtatccgataatta 178  Q
    |||||||||||||||| ||||||| ||||||||||| |||||    
T  42229740 ccgatacttcctgatacgtatcagaagagtatccgaaaatta 42229781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 48123602 - 48123662
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    ||||||| |||||||||||||||| |||||||| ||| ||| | ||| ||||||||||||||    
T  48123602 tatagtgattcttttttgaatcgacatagtataacacaaac-aagttccttttggatatagt 48123662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 48333136 - 48333181
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccga 172  Q
    ||||||||||  |||||||||||||| ||||||||| |||||||||    
T  48333136 aaataattatttgatacttcctgatacgtatcaggaaagtatccga 48333181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 48334079 - 48334124
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccga 172  Q
    ||||||||||| |||||||||||||| |||||| || |||||||||    
T  48334079 aaataattatctgatacttcctgatacgtatcaagaaagtatccga 48334124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 52505156 - 52505104
Alignment:
Q  251 ttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagt 304  Q
    |||||||||| |||||||||||||| ||||||| | ||| ||||||||||||||    
T  52505156 ttcttttttggatcgatatagtataacactaac-aagttccttttggatatagt 52505104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 1679021 - 1678981
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaac 283  Q
    ||||||| |||||||||| |||||||||||||| |||||||    
T  1679021 tatagtgattcttttttggatcgatatagtatatcactaac 1678981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 25937177 - 25937145
Alignment:
Q  16 gcccgatattttaaaatggatgacgtatcgtat 48  Q
    |||||||| ||||||||||||||||||||||||    
T  25937177 gcccgatactttaaaatggatgacgtatcgtat 25937145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 320
Target Start/End: Complemental strand, 202664 - 202553
Alignment:
Q  210 aattaatgttaactaaaataacttaacgtt-gagtatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtatat 308  Q
    ||||||||||||||||||||| |||||  | ||||||| ||||||||||||  ||| ||||| |||||||||||| || |||||||||||||||  |||     
T  202664 aattaatgttaactaaaataatttaactctcgagtataatgcttcttttttagatcaatataatatagcactaacaatatttcttttggatataacataa 202565  T
Q  309 cacttatgatgt 320  Q
    || |||||||||    
T  202564 catttatgatgt 202553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 43946 - 43890
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggata 300  Q
    ||||||| |||||||| | |||||||||||||||||||||| | ||| ||||||||||    
T  43946 tatagtgattctttttcggatcgatatagtatagcactaac-aagttccttttggata 43890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 13374 - 13438
Alignment:
Q  127 aaataattatccgatacttcctgatatgtatcaggagagtatccgataattatcctacacagata 191  Q
    ||||||||||||||| ||||||||||  |||||| ||||||| ||||||||||||| ||| ||||    
T  13374 aaataattatccgatgcttcctgatacttatcagaagagtattcgataattatcctgcaccgata 13438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 302
Target Start/End: Complemental strand, 41425 - 41367
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatata 302  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||| ||||||||||||    
T  41425 tatagtgcttcttttttggatcgatatagtataacactaac-aagttccttttggatata 41367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 5908 - 5972
Alignment:
Q  243 tatagtgcttcttttttgaatcgatatagtatagcactaacgatgtttcttttggatatagtata 307  Q
    |||||||||||||||||  || ||||||||||| || |||| ||||| ||||| |||||||||||    
T  5908 tatagtgcttctttttttgattgatatagtataacattaacaatgttcctttttgatatagtata 5972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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