View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7734_high_1 (Length: 500)
Name: NF7734_high_1
Description: NF7734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7734_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 450; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 23 - 488
Target Start/End: Complemental strand, 41276124 - 41275659
Alignment:
| Q |
23 |
acagtatatctaaagtaagattcttgaatttgaaatattcacgtatatgtacttggcttttaaatctcttcattcaatgactgatttcactgacctttct |
122 |
Q |
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| T |
41276124 |
acagtataactaaagtaagattcttgaatttgaaatattcacgtatatgtacttggcttttaaatctcttcattcaatgactgatttcactgacctttct |
41276025 |
T |
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| Q |
123 |
ggaaacctggctctatagatgagcttgatatctccatttgagatgcaacatattgaactgccttcatctacaaatggtgttagagacctgcacatttctc |
222 |
Q |
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| T |
41276024 |
ggaaacctggctctatagatgagcttgatatctccatttgagatgcaacatattgaactgccttcatctacaaatggtgttagagacctgcacatttctc |
41275925 |
T |
|
| Q |
223 |
cttttggtagtaaacaggccctctatgcgtcatttgggaagcaattatcagtgctcaggtatagctgcattaagtactgattcatttagtcttgcaatgt |
322 |
Q |
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| T |
41275924 |
cttttggtagtaaacaggccctctatgcgtcatttgggaagcaattatcagtgctcaggtatagctgcattaagtactgattcatttagtcttgcaatgt |
41275825 |
T |
|
| Q |
323 |
aaaaaattttcgttgacgtattttatgttgttacagcttggacagcggcacccctgttctcaattatgatctagaggtataagtttgttccataattctg |
422 |
Q |
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|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41275824 |
aaaattttgtcgttgacgtattttatgttgttacagcttggacagcggcacccctgttctcaattatgatctagaggtataagtttgttccataattctg |
41275725 |
T |
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| Q |
423 |
atttagtggaaataaaacttttaataatagtttatatttccatgccttatggttttctagaatatt |
488 |
Q |
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| T |
41275724 |
atttagtggaaataaaacttttaataatagtttatatttccatgccttatggttttctagaatatt |
41275659 |
T |
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