View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7735_high_1 (Length: 579)
Name: NF7735_high_1
Description: NF7735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7735_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 280; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 19 - 347
Target Start/End: Complemental strand, 32012935 - 32012612
Alignment:
| Q |
19 |
gcattgcaatcacaaaaccctaaccatcattctcattaattaacaaaatctttgttactctgtgttttcttttttaatatatattgttaatgttataata |
118 |
Q |
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| T |
32012935 |
gcattgcaaacacaaaaccctaaccatcattctcattaattaacaaaatctttgttattctgttttttcttttttaatatatattgttaatgtta--ata |
32012838 |
T |
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| Q |
119 |
tgtcgcattcacaatccctattattattgttaacccaattcttcaattctctttaccctcctaatttgatcttttcgtaattcctagtccttatatacat |
218 |
Q |
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| T |
32012837 |
tgtcgcattcacaatccctattatt---gttaacccaattcttcaattctctttaccctcctaatttgatcttttcgtaattcctagtccttatatacat |
32012741 |
T |
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| Q |
219 |
catgggttgtggcatctcaactatggacgcaaataatgcatccaaggttggacgtcgtttcaatggtcgattacgtcatcaacatgccgctgttccgcgg |
318 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
32012740 |
catgggttgtggcatctcaactatggactcaaataatgcatccaaggttggatgtcgtttcaatggtcgattacgtcatcaacatgccgctgttccacgg |
32012641 |
T |
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| Q |
319 |
cccattgtagacaacaacaagaaatataa |
347 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
32012640 |
cccattgtagacaacaacaagaaatataa |
32012612 |
T |
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