View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7737_high_49 (Length: 259)
Name: NF7737_high_49
Description: NF7737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7737_high_49 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 6101359 - 6101126
Alignment:
| Q |
19 |
gaatgaggaaggggttacaggagagagtttgttaggaacggttggaggggtaatttggggattttgtgaaattttctccggtgaatgtgaattggaagat |
118 |
Q |
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| T |
6101359 |
gaatgaggaaggggttacaggagagagtttgttaggaacggttggaggggtaatttggggattttgtgaaattttctccggtgaatgtgaattggaagat |
6101260 |
T |
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| Q |
119 |
gatgaagaagaaatgtagtatttgtagggattagggaaacgaagaaggggtcgtgttcttctaaaacagattcgaagcattgttttgtttaatttagttt |
218 |
Q |
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| T |
6101259 |
gatgaagaagaaatgtagtatttgtagggattagggaaacgaagaaggggtcgtgttcttctaaaacagattcgaagcattgttttgtttaatttagttt |
6101160 |
T |
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| Q |
219 |
ttgtgattaatattgcaatgtgatgagaataatg |
252 |
Q |
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| T |
6101159 |
ttgtgattaatattgcaatgtgatgagaataatg |
6101126 |
T |
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