View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7737_low_23 (Length: 429)
Name: NF7737_low_23
Description: NF7737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7737_low_23 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 392; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 17 - 429
Target Start/End: Original strand, 41703993 - 41704405
Alignment:
| Q |
17 |
tatatttgttgacttaacatctctatggtaaataggggtgtgtgcagaagaatgcaagtaagccaatgcttcagctgtttgaaaagcaatcttaagccnn |
116 |
Q |
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| T |
41703993 |
tatatttgttgacttaacatctctatggtaaataggggtgtgtgcagaagaatgcaagtaagccaatgcttcagctgtttgaaaagcaatcttaagcctt |
41704092 |
T |
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| Q |
117 |
nnnnnccagtcaagaaaatttggatatctaccatgaatatggtcatagagggtcccatttgagatatactcatagatcatcaaaggctgctcagattcca |
216 |
Q |
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| T |
41704093 |
tttttccagtcaagaaaatttggatatctaccatgaatatggtcatagagggtcccatttgagatatactcatagatcatcaaaggctgctcagattcca |
41704192 |
T |
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| Q |
217 |
cacagcaacctaagagtcttactaggttcttgtgattaacttgagaaagtattgaaacctcattaagcacttgttgtgtgcttttaaggttaccaactct |
316 |
Q |
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| T |
41704193 |
cacagcaacctaagagtcttactaggttcttgtgattaacttgagaaagtattgaaacctcattaagcacttgttgtgtgcttttaaggttaccaactct |
41704292 |
T |
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| Q |
317 |
agctttcttgacagctacaatagttccatcttgtagttcacctttgtaaacttccccaaagccaccacttcctaggatcctgtcttgtgaaaaacagttt |
416 |
Q |
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| T |
41704293 |
agctttcttgacagctacaatagttccatcttgtagttcacctttgtaaacttccccaaagccaccacttcctaggatcctgtcttgtgaaaaacagttt |
41704392 |
T |
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| Q |
417 |
gttgctttcttca |
429 |
Q |
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| T |
41704393 |
gttgctttcttca |
41704405 |
T |
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