View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7737_low_55 (Length: 280)
Name: NF7737_low_55
Description: NF7737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7737_low_55 |
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Alignment Details
Target: chr8 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 19 - 270
Target Start/End: Original strand, 2263215 - 2263466
Alignment:
| Q |
19 |
agattatgccctccttgtgggattggattatctaccgtcactaactatactatatacattttcacactgaataactatgtgaccgttcaatctaaatcga |
118 |
Q |
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| T |
2263215 |
agattatgccctccttgtgggattggattatctaccgtcactaactatactatatacattttcacactgaataactatgtgaccgttcaatctaaatcga |
2263314 |
T |
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| Q |
119 |
aaagtttagatctcaaacaaaacttgatttccttttaaaaataaaatctttgagcttgatatctaaaccgtagtcattaaatatattaagagtacaccta |
218 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2263315 |
aaggtttagatctcaaacaaaacttgatttccttttaaaaataaaatctttgagcttgatatctaaaccgtagtcattaaatatattaagagtacaccta |
2263414 |
T |
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| Q |
219 |
gtaacaacgggaaatcttgatctcccctgaagaaaaaggagtcttgatctct |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2263415 |
gtaacaacgggaaatcttgatctcccctgaagaaaaaggagtcttgatctct |
2263466 |
T |
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