View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7737_low_65 (Length: 249)
Name: NF7737_low_65
Description: NF7737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7737_low_65 |
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Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 22 - 213
Target Start/End: Original strand, 6100883 - 6101074
Alignment:
| Q |
22 |
aaagatagatcatgttctatggcatattcttgtgactaatttcctaaaatcctatattgtccgtccatgcatgtagcaccttgcatttcatttcatgcac |
121 |
Q |
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| T |
6100883 |
aaagatagatcatgttctatggcatattcttgtgactaatttcctaaaatcctatattgtccgtccatgcatgtagcaccttgcatttcatttcatgcac |
6100982 |
T |
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| Q |
122 |
aaaaccgagatacactcccgccatccatccaagcctgcaacatcttcttcacccctcacgcaagaaagaagacactcaagtcaatcaacgac |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6100983 |
aaaaccgagatacactcccgccatccatccaagcctgcaacatcttcttcacccctcacgcaagaaagaagacactcaagtcaatcaacgac |
6101074 |
T |
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