View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7737_low_70 (Length: 241)

Name: NF7737_low_70
Description: NF7737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7737_low_70
NF7737_low_70
[»] chr6 (21 HSPs)
chr6 (9-225)||(24111142-24111358)
chr6 (1-65)||(13462974-13463038)
chr6 (148-187)||(24111326-24111365)
chr6 (15-104)||(14173392-14173482)
chr6 (15-104)||(14177928-14178018)
chr6 (9-99)||(10258346-10258437)
chr6 (15-108)||(13462981-13463074)
chr6 (13-73)||(15517123-15517184)
chr6 (15-95)||(16120976-16121057)
chr6 (9-73)||(33689262-33689327)
chr6 (16-95)||(18491710-18491790)
chr6 (1-68)||(31996537-31996605)
chr6 (1-92)||(2157570-2157663)
chr6 (15-73)||(3012408-3012467)
chr6 (15-73)||(7158304-7158363)
chr6 (1-67)||(10731507-10731574)
chr6 (14-73)||(12501619-12501676)
chr6 (33-104)||(15718460-15718531)
chr6 (17-73)||(21478586-21478643)
chr6 (9-65)||(33122896-33122953)
chr6 (13-73)||(34379768-34379829)
[»] chr4 (59 HSPs)
chr4 (15-104)||(37255730-37255819)
chr4 (1-73)||(4386357-4386429)
chr4 (13-95)||(2254000-2254082)
chr4 (1-73)||(5535747-5535819)
chr4 (1-104)||(22020118-22020221)
chr4 (13-108)||(2401038-2401134)
chr4 (1-97)||(44171443-44171538)
chr4 (15-94)||(16667076-16667155)
chr4 (33-95)||(16912450-16912512)
chr4 (15-92)||(3740357-3740434)
chr4 (13-99)||(4484081-4484168)
chr4 (17-95)||(11796635-11796713)
chr4 (13-99)||(55416307-55416392)
chr4 (1-73)||(21586952-21587025)
chr4 (1-73)||(46462413-46462486)
chr4 (13-73)||(52914031-52914092)
chr4 (1-73)||(3094300-3094372)
chr4 (15-95)||(11796596-11796676)
chr4 (1-92)||(28702075-28702167)
chr4 (15-95)||(37255693-37255773)
chr4 (15-67)||(44171482-44171533)
chr4 (15-97)||(40051040-40051123)
chr4 (17-67)||(48042641-48042692)
chr4 (17-67)||(54787021-54787072)
chr4 (21-99)||(26909671-26909749)
chr4 (51-97)||(36688434-36688480)
chr4 (16-73)||(36786183-36786241)
chr4 (1-67)||(48796215-48796281)
chr4 (9-73)||(4708578-4708643)
chr4 (17-73)||(11583757-11583814)
chr4 (35-104)||(15659937-15660006)
chr4 (1-73)||(16039995-16040068)
chr4 (15-95)||(19934649-19934730)
chr4 (17-73)||(20542836-20542893)
chr4 (2-67)||(20788075-20788140)
chr4 (17-73)||(21003973-21004030)
chr4 (47-100)||(26636521-26636574)
chr4 (15-95)||(29006883-29006964)
chr4 (1-73)||(33694002-33694075)
chr4 (9-73)||(39160856-39160921)
chr4 (17-73)||(40952589-40952646)
chr4 (17-73)||(42013179-42013236)
chr4 (1-73)||(44239818-44239891)
chr4 (13-73)||(47181592-47181653)
chr4 (15-95)||(54164824-54164905)
chr4 (13-73)||(55936020-55936081)
chr4 (1-73)||(56328484-56328557)
chr4 (15-99)||(2253961-2254045)
chr4 (15-67)||(3094315-3094367)
chr4 (1-73)||(3740342-3740414)
chr4 (13-68)||(4406287-4406343)
chr4 (15-67)||(5535762-5535814)
chr4 (1-64)||(9992636-9992700)
chr4 (15-95)||(16667112-16667192)
chr4 (6-73)||(31262633-31262701)
chr4 (18-73)||(36072621-36072677)
chr4 (41-73)||(37306927-37306959)
chr4 (17-64)||(42013196-42013244)
chr4 (1-80)||(42911649-42911729)
[»] chr1 (52 HSPs)
chr1 (1-73)||(9902602-9902674)
chr1 (1-108)||(47446666-47446773)
chr1 (1-95)||(39940521-39940615)
chr1 (1-106)||(44673920-44674025)
chr1 (1-95)||(52112887-52112981)
chr1 (16-95)||(34768290-34768369)
chr1 (20-73)||(19580247-19580300)
chr1 (1-73)||(6079098-6079170)
chr1 (15-95)||(52112924-52113004)
chr1 (15-94)||(36163970-36164049)
chr1 (15-92)||(42915661-42915738)
chr1 (15-95)||(5431352-5431432)
chr1 (15-67)||(39940526-39940578)
chr1 (15-95)||(42660368-42660447)
chr1 (12-73)||(11324478-11324540)
chr1 (12-73)||(11482499-11482561)
chr1 (9-94)||(33765799-33765885)
chr1 (15-73)||(36164006-36164064)
chr1 (3-73)||(39393009-39393079)
chr1 (15-95)||(1409060-1409141)
chr1 (1-73)||(19175622-19175695)
chr1 (13-73)||(26674232-26674293)
chr1 (13-73)||(34953942-34954003)
chr1 (15-95)||(38834622-38834703)
chr1 (1-92)||(11989343-11989435)
chr1 (47-95)||(42660436-42660484)
chr1 (1-67)||(15278599-15278666)
chr1 (15-73)||(15351748-15351807)
chr1 (1-67)||(29070656-29070723)
chr1 (17-67)||(31909799-31909850)
chr1 (17-67)||(38149403-38149454)
chr1 (2-67)||(31327606-31327672)
chr1 (1-73)||(435239-435312)
chr1 (17-73)||(13219450-13219509)
chr1 (22-71)||(13288390-13288439)
chr1 (13-73)||(14775318-14775379)
chr1 (15-95)||(19175599-19175680)
chr1 (1-73)||(22954805-22954878)
chr1 (15-67)||(29070665-29070718)
chr1 (13-73)||(41007710-41007771)
chr1 (13-73)||(41007723-41007784)
chr1 (15-67)||(41563036-41563089)
chr1 (17-73)||(43384533-43384590)
chr1 (9-73)||(50503216-50503281)
chr1 (47-95)||(10256792-10256840)
chr1 (47-95)||(12750563-12750611)
chr1 (36-84)||(19771167-19771215)
chr1 (18-73)||(24807942-24807998)
chr1 (45-73)||(26937894-26937922)
chr1 (17-68)||(38190886-38190938)
chr1 (17-68)||(39216153-39216205)
chr1 (1-73)||(42915681-42915753)
[»] chr3 (40 HSPs)
chr3 (1-108)||(611580-611687)
chr3 (15-95)||(36571423-36571503)
chr3 (15-97)||(21970510-21970592)
chr3 (15-97)||(21992946-21993028)
chr3 (31-97)||(22152724-22152790)
chr3 (15-108)||(39836914-39837007)
chr3 (15-92)||(1086557-1086635)
chr3 (1-95)||(4190640-4190734)
chr3 (10-95)||(2128405-2128490)
chr3 (15-64)||(39836908-39836957)
chr3 (13-95)||(36571386-36571468)
chr3 (17-99)||(50466820-50466902)
chr3 (13-73)||(331844-331905)
chr3 (15-60)||(2128408-2128453)
chr3 (13-73)||(12744934-12744995)
chr3 (3-95)||(14756419-14756512)
chr3 (1-73)||(18409253-18409326)
chr3 (17-73)||(22528902-22528959)
chr3 (13-73)||(26121572-26121633)
chr3 (13-73)||(26244413-26244474)
chr3 (9-73)||(43493834-43493903)
chr3 (15-73)||(27707211-27707270)
chr3 (13-95)||(54595836-54595918)
chr3 (1-95)||(611616-611710)
chr3 (50-95)||(8256908-8256953)
chr3 (17-73)||(19810940-19810997)
chr3 (9-73)||(24722729-24722794)
chr3 (13-73)||(27224626-27224687)
chr3 (17-73)||(32833713-32833770)
chr3 (1-73)||(32956452-32956525)
chr3 (17-73)||(39530428-39530485)
chr3 (13-73)||(45736733-45736794)
chr3 (13-73)||(47334675-47334736)
chr3 (1-64)||(1043965-1044029)
chr3 (9-68)||(3020656-3020716)
chr3 (15-95)||(4190677-4190757)
chr3 (9-68)||(10841735-10841795)
chr3 (1-66)||(36458664-36458730)
chr3 (1-56)||(37331633-37331689)
chr3 (13-104)||(41743636-41743728)
[»] chr5 (35 HSPs)
chr5 (15-93)||(7313844-7313922)
chr5 (1-95)||(13654543-13654637)
chr5 (15-95)||(25713710-25713790)
chr5 (9-95)||(1098639-1098725)
chr5 (1-95)||(27895908-27896002)
chr5 (15-95)||(1098676-1098756)
chr5 (9-73)||(40100129-40100193)
chr5 (9-92)||(16899729-16899813)
chr5 (12-99)||(31706004-31706092)
chr5 (15-104)||(25358106-25358194)
chr5 (15-95)||(7313879-7313959)
chr5 (15-99)||(25713747-25713831)
chr5 (1-99)||(1100064-1100163)
chr5 (15-73)||(2673895-2673954)
chr5 (1-67)||(4162842-4162909)
chr5 (15-93)||(10495224-10495303)
chr5 (17-67)||(15966006-15966057)
chr5 (17-67)||(18942025-18942076)
chr5 (15-101)||(40100092-40100178)
chr5 (13-73)||(1100103-1100164)
chr5 (1-73)||(6279444-6279517)
chr5 (9-73)||(10437671-10437735)
chr5 (13-73)||(11795769-11795830)
chr5 (47-104)||(13391533-13391590)
chr5 (13-73)||(15062331-15062392)
chr5 (1-73)||(31691006-31691079)
chr5 (20-67)||(3161279-3161327)
chr5 (1-37)||(8221977-8222013)
chr5 (15-67)||(13654548-13654600)
chr5 (47-95)||(14303108-14303156)
chr5 (9-56)||(22650898-22650946)
chr5 (1-56)||(32911504-32911560)
chr5 (47-99)||(36759441-36759493)
chr5 (51-95)||(36864507-36864551)
chr5 (24-95)||(36897753-36897825)
[»] chr7 (44 HSPs)
chr7 (1-95)||(8169131-8169225)
chr7 (1-95)||(21099278-21099372)
chr7 (15-95)||(30457779-30457859)
chr7 (1-73)||(32599696-32599768)
chr7 (1-95)||(11602802-11602896)
chr7 (15-95)||(38940268-38940348)
chr7 (15-99)||(8169104-8169188)
chr7 (15-95)||(30457742-30457822)
chr7 (9-67)||(19688138-19688197)
chr7 (33-99)||(34840621-34840687)
chr7 (1-93)||(27163199-27163292)
chr7 (15-95)||(43813136-43813217)
chr7 (9-92)||(16777906-16777990)
chr7 (17-64)||(10246074-10246121)
chr7 (9-99)||(38940227-38940317)
chr7 (13-73)||(9555293-9555354)
chr7 (15-95)||(18654594-18654675)
chr7 (15-99)||(18819938-18820023)
chr7 (13-73)||(30138834-30138895)
chr7 (1-73)||(46221111-46221184)
chr7 (17-73)||(3341923-3341979)
chr7 (1-68)||(12088845-12088913)
chr7 (14-73)||(24280868-24280928)
chr7 (17-67)||(19532003-19532054)
chr7 (34-101)||(37930701-37930768)
chr7 (17-67)||(39970196-39970247)
chr7 (13-99)||(46384401-46384485)
chr7 (47-93)||(48873022-48873068)
chr7 (24-73)||(3345085-3345134)
chr7 (17-73)||(3498327-3498384)
chr7 (9-73)||(21586856-21586921)
chr7 (13-97)||(28752088-28752173)
chr7 (17-73)||(32389205-32389262)
chr7 (17-73)||(33471523-33471580)
chr7 (9-73)||(35216509-35216574)
chr7 (17-73)||(39970207-39970264)
chr7 (17-73)||(41888779-41888836)
chr7 (1-37)||(2851046-2851082)
chr7 (15-95)||(11602779-11602859)
chr7 (9-68)||(16777934-16777994)
chr7 (15-67)||(21099283-21099335)
chr7 (9-68)||(21387614-21387674)
chr7 (15-67)||(32599711-32599763)
chr7 (10-73)||(39960281-39960345)
[»] chr2 (50 HSPs)
chr2 (1-95)||(41824272-41824366)
chr2 (15-95)||(43893165-43893245)
chr2 (13-95)||(14952776-14952859)
chr2 (9-73)||(32143448-32143513)
chr2 (13-73)||(41805307-41805368)
chr2 (15-92)||(44274590-44274667)
chr2 (1-73)||(18731305-18731377)
chr2 (15-95)||(45472421-45472501)
chr2 (15-73)||(3197991-3198050)
chr2 (15-73)||(44274575-44274633)
chr2 (1-73)||(17866214-17866287)
chr2 (17-73)||(37396237-37396294)
chr2 (1-73)||(38465823-38465896)
chr2 (1-73)||(41823774-41823847)
chr2 (18-73)||(324829-324885)
chr2 (1-73)||(27964318-27964390)
chr2 (1-73)||(35498155-35498227)
chr2 (15-67)||(43893156-43893208)
chr2 (1-67)||(5144307-5144374)
chr2 (1-67)||(7606184-7606251)
chr2 (17-99)||(10996253-10996336)
chr2 (17-67)||(17843990-17844041)
chr2 (13-73)||(37182849-37182910)
chr2 (36-95)||(43542929-43542988)
chr2 (13-70)||(11093576-11093634)
chr2 (33-95)||(44094867-44094929)
chr2 (9-73)||(3098168-3098233)
chr2 (21-73)||(4637061-4637114)
chr2 (17-73)||(5580283-5580340)
chr2 (17-73)||(6166073-6166130)
chr2 (17-73)||(10041575-10041632)
chr2 (9-73)||(10602336-10602401)
chr2 (1-73)||(19612974-19613047)
chr2 (21-73)||(23962327-23962380)
chr2 (1-73)||(26003469-26003542)
chr2 (1-73)||(29573847-29573920)
chr2 (1-73)||(30905158-30905231)
chr2 (13-73)||(31024217-31024278)
chr2 (1-73)||(33052176-33052249)
chr2 (1-73)||(35024372-35024445)
chr2 (13-73)||(37195085-37195146)
chr2 (13-73)||(38181806-38181867)
chr2 (15-92)||(41824309-41824386)
chr2 (15-99)||(44089474-44089559)
chr2 (15-64)||(45472458-45472507)
chr2 (37-73)||(800764-800800)
chr2 (17-73)||(9419432-9419488)
chr2 (9-92)||(25899880-25899964)
chr2 (13-68)||(32630444-32630500)
chr2 (18-73)||(44089459-44089515)
[»] chr8 (33 HSPs)
chr8 (15-93)||(24418929-24419007)
chr8 (1-95)||(13841859-13841953)
chr8 (15-73)||(24418914-24418972)
chr8 (15-104)||(36307994-36308083)
chr8 (1-86)||(36308026-36308111)
chr8 (15-67)||(13841896-13841948)
chr8 (15-67)||(24820337-24820389)
chr8 (9-73)||(37508969-37509033)
chr8 (1-99)||(26998703-26998802)
chr8 (1-95)||(24820332-24820426)
chr8 (9-73)||(14599683-14599748)
chr8 (15-104)||(17800631-17800720)
chr8 (1-73)||(28882697-28882770)
chr8 (17-73)||(43295938-43295995)
chr8 (1-73)||(6260643-6260715)
chr8 (9-57)||(12782924-12782972)
chr8 (1-73)||(17800663-17800735)
chr8 (15-73)||(6189682-6189741)
chr8 (15-73)||(13964452-13964511)
chr8 (1-67)||(17871797-17871864)
chr8 (17-67)||(19293055-19293106)
chr8 (4-73)||(3225813-3225883)
chr8 (17-67)||(33934129-33934178)
chr8 (9-73)||(2805855-2805920)
chr8 (13-73)||(7484650-7484711)
chr8 (13-73)||(10117016-10117077)
chr8 (13-73)||(11295710-11295771)
chr8 (9-38)||(24842076-24842105)
chr8 (9-73)||(33385213-33385278)
chr8 (13-73)||(40640324-40640385)
chr8 (17-73)||(42631812-42631869)
chr8 (13-68)||(5888382-5888438)
chr8 (47-95)||(37509016-37509064)
[»] scaffold0148 (1 HSPs)
scaffold0148 (9-99)||(21130-21219)
[»] scaffold0294 (1 HSPs)
scaffold0294 (25-99)||(12971-13045)
[»] scaffold0756 (1 HSPs)
scaffold0756 (17-73)||(3551-3608)
[»] scaffold0542 (1 HSPs)
scaffold0542 (17-73)||(3464-3521)
[»] scaffold0014 (1 HSPs)
scaffold0014 (21-73)||(133170-133223)
[»] scaffold0635 (1 HSPs)
scaffold0635 (17-73)||(5438-5495)
[»] scaffold0009 (1 HSPs)
scaffold0009 (13-73)||(146014-146075)


Alignment Details
Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 24111142 - 24111358
Alignment:
Q  9 atttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaacagatgga 108  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| ||||||    
T  24111142 atttattaaatgatgtatgtggtttatatataaactatatacatcatttattgaataaatctaaaaattgaacttttacttataataatgaacggatgga 24111241  T
Q  109 tctcagcttcggtctttattatgcttattacatacaatggtttgtttgtagtatgatagataaccataatctaacttgttgtttgtttgtttgtagtatg 208  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24111242 tctctgcttcggtctttattatgcttattacatacaatggtttgtttgtagtatgatagataaccataatctaacttgttgtttgtttgtttgtagtatg 24111341  T
Q  209 atagatagccataatct 225  Q
    ||||||| |||||||||    
T  24111342 atagataaccataatct 24111358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13463038 - 13462974
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatg 65  Q
    ||||||| ||| ||||||||||||||||||| |||||||| | || |||||||||||||||||||    
T  13463038 ttaggttcattcattaaatgatgtatgtggtttatatatagattacatacatcatttattgaatg 13462974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 187
Target Start/End: Original strand, 24111326 - 24111365
Alignment:
Q  148 gtttgtttgtagtatgatagataaccataatctaacttgt 187  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24111326 gtttgtttgtagtatgatagataaccataatctaacttgt 24111365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 14173482 - 14173392
Alignment:
Q  15 taaatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaacaga 104  Q
    |||||||||||||||||| |||| ||| |||| |||| ||||||||||||||||| |||| |||  | |||| ||||||||| ||| ||||    
T  14173482 taaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaattagatttttgcttataatagtgaccaga 14173392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 14178018 - 14177928
Alignment:
Q  15 taaatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaacaga 104  Q
    |||||||||||||||||| |||| ||| |||| |||| ||||||||||||||||| |||| |||  | |||| ||||||||| ||| ||||    
T  14178018 taaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaattagatttttgcttataatagtgaccaga 14177928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 10258346 - 10258437
Alignment:
Q  9 atttattaaatgatgtatgtggtctatatataa--actatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    |||||||||||||||||  ||||||||| ||||  || |||||||||||| ||||||||||| |||| | | |  ||||||||||||||||||    
T  10258346 atttattaaatgatgtacatggtctata-ataatgaccatatacatcattaattgaatgaatctaaaaagttattttttacttataataatga 10258437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 13462981 - 13463074
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaacagatgga 108  Q
    ||||||||||||||  ||||||||||||| | |||||||||||| ||||||||  |||| | | || |||| ||||||||| | | ||||||||    
T  13462981 taaatgatgtatgtaatctatatataaaccacatacatcatttaatgaatgaacctaaaaagtcaatttttgcttataatagttaccagatgga 13463074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 15517184 - 15517123
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||| ||| | || |||||||||||||| ||||||||| ||||    
T  15517184 attaaatgatgtatgtggtctataataaagacgatatacatcatttaatgaatgaatctaaa 15517123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 16121057 - 16120976
Alignment:
Q  15 taaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||| ||||| ||| |||| || |  |||||||||||||||||||||||||| |   |||||||||||||||||    
T  16121057 taaatgatgtatttggtcaataatatagaccaagtacatcatttattgaatgaatttaaaaagataacttttacttataata 16120976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 33689327 - 33689262
Alignment:
Q  9 atttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||| |||||| ||| | ||||||||||| ||| ||||||||||| ||||    
T  33689327 atttattaaatgatgtatgtagtctataataaatactatatacattattaattgaatgaatataaa 33689262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 18491710 - 18491790
Alignment:
Q  16 aaatgatgtatgtggtctatatataaactatatacatca-tttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||||||||| |||||||| | ||| | |||||||| |||||||||||||  |||| | | |||||||||||||||||    
T  18491710 aaatgatgtatgtagtctatatgtgaaccacatacatcaatttattgaatgaacctaaaaagtcaacttttacttataata 18491790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31996605 - 31996537
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaat 68  Q
    ||||||| |||||||||||||||||||| |||||| ||| | || |||||||| ||| |||||||||||    
T  31996605 ttaggttcatttattaaatgatgtatgtagtctataataaataccatatacattattaattgaatgaat 31996537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 2157663 - 2157570
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaact--atatacatcatttattgaatgaatttaaagattgaacttttacttata 92  Q
    ||||||| ||| ||| |||||||||||||||| ||| ||||||||  |||||||||||| | ||||||||| |||| | |||| |||||||||||    
T  2157663 ttaggttcattcatttaatgatgtatgtggtccatattataaactacatatacatcattaaatgaatgaatctaaatagtgaa-ttttacttata 2157570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 3012408 - 3012467
Alignment:
Q  15 taaatgatgtatgtggtctatata-taaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||| |||  ||||| | |||||||||||||||||||||| ||||    
T  3012408 taaatgatgtatgtggtctttattgtaaacaacatacatcatttattgaatgaatctaaa 3012467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 7158304 - 7158363
Alignment:
Q  15 taaatgatgtatgtggtctatata-taaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||| |||  || || |||||||||||||||||||||||| ||||    
T  7158304 taaatgatgtatgtggtctttattgtagacaatatacatcatttattgaatgaatctaaa 7158363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10731507 - 10731574
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaa 67  Q
    ||||||| ||| ||| ||||||||||||| |||||| ||||||| | |||||||||| ||||||||||    
T  10731507 ttaggttcattcatttaatgatgtatgtgatctatattataaaccacatacatcattaattgaatgaa 10731574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 12501676 - 12501619
Alignment:
Q  14 ttaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||  |||| ||||||||    
T  12501676 ttaaatgatgtatgtggtctata-ataaac-atatacatcatttaacgaataaatttaaa 12501619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 15718460 - 15718531
Alignment:
Q  33 tatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaacaga 104  Q
    |||||||| || | |||||||||||||||||||||||| || | |||| |||| ||||||||| ||| ||||    
T  15718460 tatatatacaccacatacatcatttattgaatgaattttaaaagtgaatttttgcttataatagtgatcaga 15718531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 21478643 - 21478586
Alignment:
Q  17 aatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||| |||| ||| | |||||||||| ||||||||||| ||||    
T  21478643 aatgatgtatgtggtctataatatgaaccacatacatcattaattgaatgaatctaaa 21478586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 33122953 - 33122896
Alignment:
Q  9 atttattaaatgatgtatgtggtctatat-ataaactatatacatcatttattgaatg 65  Q
    ||||| ||||||||| |||||||| |||| |||||| | |||||||||||||||||||    
T  33122953 atttaataaatgatgcatgtggtccatattataaaccaaatacatcatttattgaatg 33122896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 34379829 - 34379768
Alignment:
Q  13 attaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||| ||| || | || |||||||||||||| ||||||||| ||||    
T  34379829 attaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaatctaaa 34379768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 7e-27; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 37255730 - 37255819
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaacaga 104  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| | ||||||||| ||||||||| ||| ||||    
T  37255730 taaatgatgtatgtggtctatatataaactacatacataatttattgaatgaatttaaaaagtgaacttttgcttataatagtgaccaga 37255819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4386357 - 4386429
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||    
T  4386357 ttagattaatttattaaatgatgtatgtggtctatatataaactacatagatcatttattgaatgaatctaaa 4386429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 2254000 - 2254082
Alignment:
Q  13 attaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| | | |||||||  ||||||||    
T  2254000 attaaatgatgtatgtggtctatatatagactacatatatcatttattgaatgaatttaaaaaataaacttttgtttataata 2254082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 5535819 - 5535747
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  5535819 ttaggttcattcaataactgatgtatgtggtctatatataaactacatacatcatttattgaatgaatctaaa 5535747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 22020221 - 22020118
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaa 100  Q
    ||||||| ||||| |||||||||| |||| |||| || ||||||| ||| |||||||||||||||||| |||| | ||||||||| ||||||||| |||     
T  22020221 ttaggttcatttaataaatgatgtgtgtgatctacatgtaaactacatatatcatttattgaatgaatctaaaaagtgaacttttgcttataatagtgac 22020122  T
Q  101 caga 104  Q
    ||||    
T  22020121 caga 22020118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 2401134 - 2401038
Alignment:
Q  13 attaaatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaacagatgga 108  Q
    |||||||||||||| | |||||||| ||  || | ||||||||||||||||||||||||||| | | ||||||| ||||||||||||| ||||||||    
T  2401134 attaaatgatgtatttagtctatattattgaccaaatacatcatttattgaatgaatttaaaaagttaacttttgcttataataatgaccagatgga 2401038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 44171538 - 44171443
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataat 97  Q
    ||||||| ||| |||||||||||||| || | |||||||| | || ||||||||||||||||||||||||||| | | |||||||  ||||||||||    
T  44171538 ttaggttcattcattaaatgatgtatatgtt-tatatatagattacatacatcatttattgaatgaatttaaaaaattaacttttgtttataataat 44171443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 16667155 - 16667076
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataat 94  Q
    ||||||||||||||||||||| |||||| || |||||||||||||||||| ||| |||| | | |||||||  |||||||    
T  16667155 taaatgatgtatgtggtctatttataaattacatacatcatttattgaatcaatctaaaaagttaacttttgtttataat 16667076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 16912512 - 16912450
Alignment:
Q  33 tatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||| |||| |||||||||||||||||||||| |||| |||  ||||||||||||||||    
T  16912512 tatatatagactacatacatcatttattgaatgaatctaaaaattacacttttacttataata 16912450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 3740357 - 3740434
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttata 92  Q
    |||||||||||| ||||||||||||| |||| || ||||||||||||||||||  |||| | | ||||||| ||||||    
T  3740357 taaatgatgtatctggtctatatatagactacatgcatcatttattgaatgaacctaaaaagtcaacttttgcttata 3740434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 4484168 - 4484081
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    ||||||||||||||||||||||| ||| | || |||||||||||| ||||||||||| ||||     || ||||||||||||||||||    
T  4484168 attaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatctaaaatgcaaagttttacttataataatga 4484081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 11796635 - 11796713
Alignment:
Q  17 aatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||| |||||||| |||||||| | || |||||||||||||||||| ||| |||| | |||| |||| |||||||||    
T  11796635 aatgatatatgtggtttatatatagattacatacatcatttattgaataaatctaaaaagtgaatttttgcttataata 11796713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 55416392 - 55416307
Alignment:
Q  13 attaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    ||||||| |||||||||||||||| |||||  |||||||||||| ||||||||||| | ||   | || ||||||||||||||||||    
T  55416392 attaaataatgtatgtggtctata-ataaagcatatacatcattaattgaatgaatctcaaatataaatttttacttataataatga 55416307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21586952 - 21587025
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||| |||| | |||||||||||||||  |||||| ||| |||| |||||||||||||||||||||| ||||    
T  21586952 ttaggtaaattcaataaatgatgtatgtgtcctatattatagactacatacatcatttattgaatgaatctaaa 21587025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 46462486 - 46462413
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| | |||||||||||||| |||| ||| |||||| |||||||||||||||| ||||||| ||||    
T  46462486 ttaggttcattgaataaatgatgtatgtagtctttattataaaccatatacatcatttatttaatgaatctaaa 46462413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 52914092 - 52914031
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||| ||| | ||||||||||||||||  ||||||||| ||||    
T  52914092 attaaatgatgtatgtggtctataataaagactatatacatcatttcatgaatgaatctaaa 52914031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3094372 - 3094300
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| | ||||||| |||||| |||||||  || || |||||||||||||||||||||||| ||||    
T  3094372 ttaggttcattcaataaatgacgtatgtagtctatacgtagaccatatacatcatttattgaatgaatataaa 3094300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 11796676 - 11796596
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||||||||||  ||||||||||||| | ||| |||||| |||||||||||  ||| | | ||||||| |||||||||    
T  11796676 taaatgatgtatgtaatctatatataaaccacatatatcattcattgaatgaatcgaaaaagtcaacttttgcttataata 11796596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 28702167 - 28702075
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaagattgaacttttacttata 92  Q
    ||||||| ||| ||||||||| |||||| ||||||| || | |||| |||||||||||| ||||||||| |||| ||  ||||||| ||||||    
T  28702167 ttaggttcattcattaaatgacgtatgtagtctataataaagactacatacatcatttaatgaatgaatctaaaaatcaaacttttgcttata 28702075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 37255773 - 37255693
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||| |||||||| || |||||||| || | |||||||||||||||||||||| |||| |   ||||||| |||||||||    
T  37255773 taaattatgtatgtagtttatatatagaccacatacatcatttattgaatgaatctaaaaaaccaacttttgcttataata 37255693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 44171482 - 44171533
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaa 67  Q
    ||||||||||||||  ||||||||||||| |||||||||||||| ||||||||    
T  44171482 taaatgatgtatgtaatctatatataaac-atatacatcatttaatgaatgaa 44171533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 40051040 - 40051123
Alignment:
Q  15 taaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataat 97  Q
    |||||||||||||||||||||| || |||| | |||||||||||| | |||||| |||||   | || ||||||||||||||||    
T  40051040 taaatgatgtatgtggtctatattaaaaaccacatacatcatttactaaatgaagttaaaatgtaaatttttacttataataat 40051123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 48042641 - 48042692
Alignment:
Q  17 aatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaa 67  Q
    ||||||||||||||||||| |||| ||||| |||||||||| ||||||||||    
T  48042641 aatgatgtatgtggtctataatatgaactacatacatcattaattgaatgaa 48042692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 54787072 - 54787021
Alignment:
Q  17 aatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaa 67  Q
    ||||||||||||||||||| |||||||| | |||||||||| ||||||||||    
T  54787072 aatgatgtatgtggtctataatataaaccacatacatcattgattgaatgaa 54787021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 26909749 - 26909671
Alignment:
Q  21 atgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    |||||||| ||||||||||| | |  |||||| ||||||| ||||||| |||| | | || ||||||||||||||||||    
T  26909749 atgtatgtagtctatatatagattgcatacattatttattaaatgaatctaaaaaattaatttttacttataataatga 26909671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 36688434 - 36688480
Alignment:
Q  51 atcatttattgaatgaatttaaagattgaacttttacttataataat 97  Q
    ||||||||||||||||||||||| | |||| ||||| ||||||||||    
T  36688434 atcatttattgaatgaatttaaaaagtgaaattttatttataataat 36688480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 36786241 - 36786183
Alignment:
Q  16 aaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||| |||| || | ||||||||||||||| ||||||||||| ||||    
T  36786241 aaatgatgtatgtggtttataataaagactatatacatcattaattgaatgaatctaaa 36786183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 48796281 - 48796215
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaa 67  Q
    ||||||| ||| ||| |||||||||||||||| |||||| ||| | |||||||||| | ||||||||    
T  48796281 ttaggttcattaatttaatgatgtatgtggtccatatatgaaccacatacatcattaaatgaatgaa 48796215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 4708578 - 4708643
Alignment:
Q  9 atttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||||||| ||| | |  |||||||| ||| ||| ||||||||||||    
T  4708578 atttattaaatgatgtatgtggtctataataaagatcatatacattattaattaaatgaatttaaa 4708643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 11583757 - 11583814
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||| ||| ||| ||||| |||||||||| ||||||||||| ||||    
T  11583757 aatgatgtatgtggtccataatatgaactacatacatcattaattgaatgaatctaaa 11583814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 15660006 - 15659937
Alignment:
Q  35 tatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaacaga 104  Q
    |||||| |||| |||||||||||||||||||||  |||| | ||||||||| ||| ||||| ||| ||||    
T  15660006 tatatagactacatacatcatttattgaatgaacctaaaaagtgaacttttgcttgtaatagtgaccaga 15659937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16039995 - 16040068
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||| | ||||||| |||||||| |||| | |||  | | |||||||||||||||||||||||||||    
T  16039995 ttaggttaattcaataaatgacgtatgtggactattaaatatgcgacatacatcatttattgaatgaatttaaa 16040068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 19934730 - 19934649
Alignment:
Q  15 taaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||||||| || | ||| || | |||||||||||||||||||||| |||| | || | |||| |||||||||    
T  19934730 taaatgatgtatgtggtccattaaatagaccacatacatcatttattgaatgaatctaaaaagtggaattttgcttataata 19934649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 20542893 - 20542836
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||| ||||| | | |||||||||| ||||||||||| ||||    
T  20542893 aatgatgtatgtggtctatattataacccacatacatcattaattgaatgaatctaaa 20542836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 20788140 - 20788075
Alignment:
Q  2 taggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaa 67  Q
    |||||| ||| |||||||| |||||||||||||||| |||  || ||||| |||||| ||||||||    
T  20788140 taggttcattcattaaatgttgtatgtggtctatatttaagttacatacaacatttaatgaatgaa 20788075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 21004030 - 21003973
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||| | || || |||||||||||| |||||||||| |||||    
T  21004030 aatgatgtatgtggtctataatgtagaccatatacatcattaattgaatgaacttaaa 21003973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 26636521 - 26636574
Alignment:
Q  47 atacatcatttattgaatgaatttaaagattgaacttttacttataataatgaa 100  Q
    |||||||||||||||||||||| |||| | | || |||||||||||||| ||||    
T  26636521 atacatcatttattgaatgaatctaaaaaataaatttttacttataatagtgaa 26636574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 29006883 - 29006964
Alignment:
Q  15 taaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||||||||||| || || | ||| || | ||||||||||||||||||||||||||| | || | |||| |||||||||    
T  29006883 taaatgatgtatgtgatccattaaatagaccacatacatcatttattgaatgaatttaaaaagtggaattttgcttataata 29006964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33694075 - 33694002
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| ||||||| ||||||||||||||| ||| | || |||||||||||| |||||| |||| ||||    
T  33694075 ttaggttcattcattaaattatgtatgtggtctataataaagaccatatacatcattaattgaacgaatctaaa 33694002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 39160856 - 39160921
Alignment:
Q  9 atttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||| |||| || |||||||   |||||||||||| ||||||||| ||||    
T  39160856 atttattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaa 39160921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 40952589 - 40952646
Alignment:
Q  17 aatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||| |||||| |||||||||| |||||| ||| |||||||||| |||||    
T  40952589 aatgatgtatgtagtctataatataaactacatacattattaattgaatgaacttaaa 40952646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 42013236 - 42013179
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||| |||| |||| || | |||||||||| ||||||||||||||||    
T  42013236 aatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaatttaaa 42013179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 44239818 - 44239891
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||| |||||||| |||||||| ||||| ||||||| || | |  ||||||||||||||||| |||||||||||    
T  44239818 ttagattaatttaataaatgatatatgttgtctatactaaagatcatatacatcatttattggatgaatttaaa 44239891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 47181653 - 47181592
Alignment:
Q  13 attaaatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||| |||| ||| ||||||   |||||||||||| ||||||||||||||    
T  47181653 attaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatttaaa 47181592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 54164905 - 54164824
Alignment:
Q  15 taaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||||||| || | ||| || | |||||||||||||||||||||| |||| | || | |||| |||||||||    
T  54164905 taaatgatgtatgtggtccattaaatagaccacatacatcatttattgaatgaatctaaaaagtggaattttgcttataata 54164824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 55936081 - 55936020
Alignment:
Q  13 attaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||| ||| || | || |||||||||||||| ||||||||| ||||    
T  55936081 attaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaatctaaa 55936020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 56328484 - 56328557
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| ||| ||||||||||||||||||| ||| | ||||||| ||||||| | ||||||||| ||||    
T  56328484 ttaggttcattcatttaatgatgtatgtggtctataataaagactatatgcatcattaaatgaatgaatctaaa 56328557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 2254045 - 2253961
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    |||||||| ||||| ||||||||||| || | |||||||||||| ||||| ||| |||| | | || ||||  ||||||||||||    
T  2254045 taaatgatatatgtagtctatatatagaccacatacatcatttaatgaataaatctaaaaaattaatttttgtttataataatga 2253961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 3094315 - 3094367
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaa 67  Q
    |||||||||||| |||||||  |||| |||| |||| ||||||||||||||||    
T  3094315 taaatgatgtatatggtctacgtatagactacatacgtcatttattgaatgaa 3094367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3740414 - 3740342
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| | ||||||||| |||| ||||||||||| || | |||||||||||||| ||| || |||||    
T  3740414 ttaggttcattcaataaatgatgcatgtagtctatatatagaccagatacatcatttatttaataaacttaaa 3740342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 4406287 - 4406343
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaat 68  Q
    ||||||||||||||||||||||| ||| | || | |||||||||| |||||||||||    
T  4406287 attaaatgatgtatgtggtctataataaagaccacatacatcattaattgaatgaat 4406343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 5535762 - 5535814
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaa 67  Q
    |||||||||||||| || |||||||| || | |||||||| ||||||||||||    
T  5535762 taaatgatgtatgtagtttatatatagaccacatacatcagttattgaatgaa 5535814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9992636 - 9992700
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatat-ataaactatatacatcatttattgaat 64  Q
    ||||||| ||| | |||||||||||| || || |||| ||| |||||||||||||||||||||||    
T  9992636 ttaggttcattcaataaatgatgtatatgatcaatattatagactatatacatcatttattgaat 9992700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 16667112 - 16667192
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||||||||||  | |||| ||| || | |||||||||||||||||||||  ||||   | |||||||||||||||||    
T  16667112 taaatgatgtatgtaatttataaatagaccacatacatcatttattgaatgaacgtaaaatgtcaacttttacttataata 16667192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 31262633 - 31262701
Alignment:
Q  6 ttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||| ||||||||||||||| |||||| || | |||| ||| ||||||||| |||||||| ||||    
T  31262633 ttaatttaataaatgatgtatgtgatctatattaaagactacatatatcatttatcgaatgaatctaaa 31262701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 36072621 - 36072677
Alignment:
Q  18 atgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||| |||||| ||| ||| |||| |||||||||||| ||||||||||||||    
T  36072621 atgatgtatatggtctttattatagactacatacatcatttaatgaatgaatttaaa 36072677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 37306927 - 37306959
Alignment:
Q  41 aactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||| ||||||||||||||||    
T  37306927 aactatatacatcattaattgaatgaatttaaa 37306959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 42013196 - 42013244
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaat 64  Q
    |||||||||||||||||||| ||||||| | |||||||||| |||||||    
T  42013196 aatgatgtatgtggtctatattataaaccacatacatcattaattgaat 42013244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42911649 - 42911729
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaagattgaa 80  Q
    ||||||| ||| ||| ||||||||||||||| ||| ||||| || |||||||||||| | ||||||||  |||| ||||||    
T  42911649 ttaggttcattcatttaatgatgtatgtggtttataatatacaccatatacatcattaaatgaatgaacctaaaaattgaa 42911729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9902602 - 9902674
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  9902602 ttaggttaatttattaaatgatgtatgtggtctatatataaactacatatatcatttattgaatgactttaaa 9902674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 47446666 - 47446773
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaa 100  Q
    |||||||||||   ||||| ||||||||| |||| ||||| |||| ||||||||||||||||||||||||||| | |||  |||||||||||||| |||     
T  47446666 ttaggttaattctataaattatgtatgtgatctacatatagactacatacatcatttattgaatgaatttaaaaagtgagtttttacttataatagtgac 47446765  T
Q  101 cagatgga 108  Q
    | ||||||    
T  47446766 cggatgga 47446773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 39940521 - 39940615
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||| ||||| |||||||||||| |||| |||||||| |||| |||||| ||||||||||||||| |||| | | || ||||||||||||||    
T  39940521 ttaggttcatttaataaatgatgtatatggtttatatatagactacatacattatttattgaatgaatctaaaaagtaaatttttacttataata 39940615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 44673920 - 44674025
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatata-taaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    ||||||| ||||| |||||||| ||||||||||||||| ||||||| ||| |||||| ||||||||||| |||| ||| || |||| |||||||||||||    
T  44673920 ttaggtttatttaataaatgatatatgtggtctatataataaactacatatatcatt-attgaatgaatctaaaaattaaatttttgcttataataatga 44674018  T
Q  100 acagatg 106  Q
     ||||||    
T  44674019 ccagatg 44674025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 52112981 - 52112887
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||| || || ||||||||||||||||| | |||||| || | |||||||||||||||||||||| |||| | ||||||||| |||||||||    
T  52112981 ttaggttcatctaataaatgatgtatgtggtttctatatagaccacatacatcatttattgaatgaatataaaaagtgaacttttgcttataata 52112887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 34768369 - 34768290
Alignment:
Q  16 aaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||| ||||||||| |||||||||| |||||||||||||||||||||| ||||||||| | |||| |||| |||| ||||    
T  34768369 aaataatgtatgtgatctatatatagactatatacatcatttattgaaagaatttaaaaagtgaaattttgcttacaata 34768290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 19580247 - 19580300
Alignment:
Q  20 gatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||| ||||    
T  19580247 gatgtatgtggtctatatatacactacatacatcatttattgaatgaatctaaa 19580300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6079098 - 6079170
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||||| |||||||| |||||||||| ||||| ||| | |||||||||||||||||||||| ||||    
T  6079098 ttaggtttatttaataaatgatatatgtggtctgtatatgaacgacatacatcatttattgaatgaatctaaa 6079170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 52112924 - 52113004
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||  |||||  |||| | | |||||||||||||||||    
T  52112924 taaatgatgtatgtggtctatatagaaaccacatacatcatttattagatgaacctaaaaagtcaacttttacttataata 52113004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 36164049 - 36163970
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataat 94  Q
    |||||||| |||||||| ||||||||||||| |||||||||||||||||| ||| |||| | |||| || | ||||||||    
T  36164049 taaatgatatatgtggtatatatataaactacatacatcatttattgaataaatctaaaaaatgaaattctgcttataat 36163970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 42915738 - 42915661
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttata 92  Q
    |||||||| ||||||||||||||||| |||| || ||||||||||||||||||  |||| | | ||||||| ||||||    
T  42915738 taaatgatatatgtggtctatatatagactacatgcatcatttattgaatgaacctaaaaaatcaacttttgcttata 42915661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 5431432 - 5431352
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||||||||| | ||| || | |||| ||||||||||||||||| |||| | |||| |||| |||||||||    
T  5431432 taaatgatgtatgtggtctacacatagacaacatacttcatttattgaatgaatctaaaaagtgaatttttgcttataata 5431352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 39940578 - 39940526
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaa 67  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||| ||||||    
T  39940578 taaataatgtatgtagtctatatataaaccatatacatcatttattaaatgaa 39940526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 42660447 - 42660368
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||||||||||||||||||||   | | ||||||||||||||||||||||| |||| | | ||||||| |||||||||    
T  42660447 taaatgatgtatgtggtctatataatga-tgtatacatcatttattgaatgaatctaaaaaatcaacttttgcttataata 42660368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 11324478 - 11324540
Alignment:
Q  12 tattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||| ||||||| || | || |||||||||||| ||||||||||||||||    
T  11324478 tattaaatgatgtatgtagtctataataaagaccatatacatcattaattgaatgaatttaaa 11324540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 11482499 - 11482561
Alignment:
Q  12 tattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||| ||||||| || | || |||||||||||| ||||||||||||||||    
T  11482499 tattaaatgatgtatgtagtctataataaagaccatatacatcattaattgaatgaatttaaa 11482561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 33765885 - 33765799
Alignment:
Q  9 atttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataat 94  Q
    ||||||||||||||||||||||||||| ||| | || |||||||||||| ||| || |||||||||   | || |||||||||||||    
T  33765885 atttattaaatgatgtatgtggtctataataaagaccatatacatcattaattaaacgaatttaaaatataaatttttacttataat 33765799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 36164006 - 36164064
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||| || |||||||| || | ||| |||||||||||||||||||||||    
T  36164006 taaatgatgtatgtagtttatatatataccacatatatcatttattgaatgaatttaaa 36164064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 39393009 - 39393079
Alignment:
Q  3 aggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||| ||||| ||||||||||||||||| |||||||  || ||||| || ||||||||||||||| ||||    
T  39393009 aggttcatttaataaatgatgtatgtggtatatatatggaccatatatattatttattgaatgaatctaaa 39393079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 1409141 - 1409060
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcattta-ttgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||||||||| ||||||| |||| |||| |||||| ||||| || ||||||| |||| | ||||||||| |||||||||    
T  1409141 taaatgatgtatgcggtctatgtatagactagatacattatttatttaaatgaatctaaaaagtgaacttttgcttataata 1409060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19175622 - 19175695
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| | ||||||||||||||||||||| | || ||| | |||||||||||||||||||||| ||||    
T  19175622 ttaggttcattcaataaatgatgtatgtggtctatttaatgaaccacatacatcatttattgaatgaatctaaa 19175695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 26674232 - 26674293
Alignment:
Q  13 attaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| |||||||||||||||| || | || |||||||||||| ||||||||||||||||    
T  26674232 attaaattatgtatgtggtctataataaagaccatatacatcattaattgaatgaatttaaa 26674293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 34953942 - 34954003
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||| ||| | || |||||||||||| ||||||||||| ||||    
T  34953942 attaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatctaaa 34954003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 38834703 - 38834622
Alignment:
Q  15 taaatgatgtatgtggtc-tatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||| ||||| | |||||| ||||||||||||||||||| ||||||| |||| | | || |||| |||||||||    
T  38834703 taaatgatgtatatggtcatttatatagactatatacatcatttatttaatgaatctaaaaaataaatttttgcttataata 38834622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 11989343 - 11989435
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaagattgaacttttacttata 92  Q
    ||||||| ||| ||||||||| |||||| ||||||| || | |||| |||||||||||| ||||||||| |||| ||  ||||||| ||||||    
T  11989343 ttaggttcattcattaaatgacgtatgtagtctataataaagactacatacatcatttaatgaatgaatctaaaaatcaaacttttgcttata 11989435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 42660436 - 42660484
Alignment:
Q  47 atacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||||||||| |||||| | ||||||||| |||||||||    
T  42660436 atacatcatttattgaatgattttaaaaaatgaacttttgcttataata 42660484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15278599 - 15278666
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaa 67  Q
    ||||||| ||| ||| ||||||||||||| |||||| ||||||| | |||||||||| ||||||||||    
T  15278599 ttaggttcattcatttaatgatgtatgtgatctatattataaaccacatacatcattaattgaatgaa 15278666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 15351807 - 15351748
Alignment:
Q  15 taaatgatgtatgtggtctatata-taaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||| |||  || || | |||||||||||||||||||||||||||    
T  15351807 taaatgatgtatgtggtctttattgtagacaacatacatcatttattgaatgaatttaaa 15351748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 29070723 - 29070656
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaa 67  Q
    ||||||| ||| | |||||||||||||||||| |||| ||| || | |||||||||||||||||||||    
T  29070723 ttaggttcattcaataaatgatgtatgtggtccatattatagaccacatacatcatttattgaatgaa 29070656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 31909799 - 31909850
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaa 67  Q
    |||||||||||||||||||| ||||||| | |||||||||| ||||||||||    
T  31909799 aatgatgtatgtggtctatattataaaccacatacatcattaattgaatgaa 31909850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 38149454 - 38149403
Alignment:
Q  17 aatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaa 67  Q
    |||||||||||||||| |||| ||||||||||||||||||| | ||||||||    
T  38149454 aatgatgtatgtggtccatattataaactatatacatcattaaatgaatgaa 38149403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 31327672 - 31327606
Alignment:
Q  2 taggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaa 67  Q
    |||||| ||| ||| |||||||||||||||||||| ||| ||| |||||||||||| | ||||||||    
T  31327672 taggttcattcatttaatgatgtatgtggtctatattatgaaccatatacatcattaaatgaatgaa 31327606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 435312 - 435239
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| ||| |||||||||||||||| ||| ||||||| | |||||||||| | ||||||||| ||||    
T  435312 ttaggttcattcatttaatgatgtatgtggtccatattataaaccacatacatcattaaatgaatgaatctaaa 435239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 13219509 - 13219450
Alignment:
Q  17 aatgatgtatgtggtctat---atataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||   |||||||| | |||||||||| |||||||||| |||||    
T  13219509 aatgatgtatgtggtctatataatataaaccacatacatcattgattgaatgaacttaaa 13219450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 13288390 - 13288439
Alignment:
Q  22 tgtatgtggtctatatataaactatatacatcatttattgaatgaattta 71  Q
    |||||||||||||| |||| || | |||||||||||||||||| ||||||    
T  13288390 tgtatgtggtctatttatataccacatacatcatttattgaataaattta 13288439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 14775318 - 14775379
Alignment:
Q  13 attaaatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||| |||||||||| ||| |||||||||| | |||||||| ||||| ||||||||    
T  14775318 attaaatgatttatgtggtctttattataaactatacatatcatttaatgaataaatttaaa 14775379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 19175680 - 19175599
Alignment:
Q  15 taaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||||||  || | ||| || | |||||||||||||||||||||  |||| | |||| ||||||||||||||    
T  19175680 taaatgatgtatgtggttcattaaatagaccacatacatcatttattgaatgaacctaaaaagtgaaattttacttataata 19175599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22954878 - 22954805
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| ||| |||||||||||||||| ||| ||||||| | |||||||||| | |||||||| |||||    
T  22954878 ttaggttcattcatttaatgatgtatgtggtccatattataaaccacatacatcattaaatgaatgaacttaaa 22954805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 29070665 - 29070718
Alignment:
Q  15 taaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaa 67  Q
    ||||||||||||||||||||| ||||  || | |||||||||||||||||||||    
T  29070665 taaatgatgtatgtggtctataatatggaccacatacatcatttattgaatgaa 29070718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 41007771 - 41007710
Alignment:
Q  13 attaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||| || |||| || | |||||||||||| ||||| ||||||||    
T  41007771 attaaatgatgtatgtggtctttattatagaccacatacatcatttaatgaataaatttaaa 41007710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 41007723 - 41007784
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||| ||| | || | |||||||||||| ||||||||| ||||    
T  41007723 attaaatgatgtatgtggtctataataaagaccacatacatcatttaatgaatgaatctaaa 41007784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 41563089 - 41563036
Alignment:
Q  15 taaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaa 67  Q
    ||||||||||||||||| |||| |||  |||| |||||||||||||||||||||    
T  41563089 taaatgatgtatgtggtttataatatggactacatacatcatttattgaatgaa 41563036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 43384533 - 43384590
Alignment:
Q  17 aatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||| |||||||| | |||||| ||| ||||||||||| ||||    
T  43384533 aatgatgtatgtggtctataatataaaccacatacataattgattgaatgaatctaaa 43384590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 50503281 - 50503216
Alignment:
Q  9 atttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||||||| ||| | |  |||||||||||| ||||||| ||| ||||    
T  50503281 atttattaaatgatgtatgtggtctataataaagatcatatacatcattaattgaataaatctaaa 50503216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 10256840 - 10256792
Alignment:
Q  47 atacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||||||||||| |||| | |||| |||| |||||||||    
T  10256840 atacatcatttattgaatgaatctaaaaagtgaattttttcttataata 10256792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 12750563 - 12750611
Alignment:
Q  47 atacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||||||||||||||||||||||| | | || ||||| ||||||||    
T  12750563 atacatcatttattgaatgaatttaaaaagtcaatttttatttataata 12750611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 19771215 - 19771167
Alignment:
Q  36 atataaactatatacatcatttattgaatgaatttaaagattgaacttt 84  Q
    ||||| || ||||||| ||||||||||||||||||||| | ||||||||    
T  19771215 atatagaccatatacaacatttattgaatgaatttaaaaagtgaacttt 19771167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 24807942 - 24807998
Alignment:
Q  18 atgatgtatgtggtctatata-taaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||| ||| || |||  |||||||||||||||||||||| ||||    
T  24807942 atgatgtatgtggtctacataatagactgcatacatcatttattgaatgaatctaaa 24807998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 73
Target Start/End: Complemental strand, 26937922 - 26937894
Alignment:
Q  45 atatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||||||||||||    
T  26937922 atatacatcatttattgaatgaatttaaa 26937894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 38190938 - 38190886
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaat 68  Q
    ||||||||||||||| |||| ||| ||| |||||||||||| |||||||||||    
T  38190938 aatgatgtatgtggtttataatattaaccatatacatcattgattgaatgaat 38190886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 39216153 - 39216205
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaat 68  Q
    |||||||||||| ||||||| || | ||||||||||||||| |||||||||||    
T  39216153 aatgatgtatgttgtctataataaagactatatacatcattaattgaatgaat 39216205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42915681 - 42915753
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| | ||||||||| |||| ||||||||||| || | ||| |||||||||| |||||| |||||    
T  42915681 ttaggttcattcaataaatgatgcatgtagtctatatatagaccacatatatcatttatttaatgaacttaaa 42915753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 611687 - 611580
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaa 100  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||| |||| |   ||||||||||||||||| |||     
T  611687 ttaggttaattcattaaataatgtatgtggtctatatatagactacatacatcatttattgaattaatctaaaaaacaaacttttacttataatagtgac 611588  T
Q  101 cagatgga 108  Q
    ||||||||    
T  611587 cagatgga 611580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 36571423 - 36571503
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||| |||||||||||||  |||||||||||||| |||||||| ||||| | | |||||||||||||||||    
T  36571423 taaatgatgtatgtagtctatatataaatcatatacatcatttaatgaatgaacttaaaaagtcaacttttacttataata 36571503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 21970592 - 21970510
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataat 97  Q
    ||||| || ||||||||||||||||| |||| |||||||||||||||||||||| ||||   | |||||||||||||||||||    
T  21970592 taaataatatatgtggtctatatatatactacatacatcatttattgaatgaatataaaatgtaaacttttacttataataat 21970510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 21993028 - 21992946
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataat 97  Q
    ||||| || ||||||||||||||||| |||| |||||||||||||||||||||| ||||   | |||||||||||||||||||    
T  21993028 taaataatatatgtggtctatatatatactacatacatcatttattgaatgaatataaaatgtaaacttttacttataataat 21992946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 22152790 - 22152724
Alignment:
Q  31 tctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataat 97  Q
    |||||||||| |||| |||||||||||||||||||||| ||||  ||||| ||||||||||||||||    
T  22152790 tctatatatatactacatacatcatttattgaatgaatataaaatttgaatttttacttataataat 22152724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 39836914 - 39837007
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaacagatgga 108  Q
    ||||||||||||||  |||||||||| || | |||||||||||||||||||||| |||| | | |||||||| |||||||| ||| ||| ||||    
T  39836914 taaatgatgtatgtattctatatatagaccacatacatcatttattgaatgaatctaaaaagtaaacttttatttataatagtgatcagttgga 39837007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 1086557 - 1086635
Alignment:
Q  15 taaatgatgtatgtggtctatata-taaactatatacatcatttattgaatgaatttaaagattgaacttttacttata 92  Q
    ||||||||||||||||| |||||| || || || ||||||||||||||||||||| |||| | |||| |||||||||||    
T  1086557 taaatgatgtatgtggtatatataatagaccatgtacatcatttattgaatgaatctaaaaagtgaatttttacttata 1086635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 4190734 - 4190640
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||| ||| | ||||||||||||| ||||||||||||  ||| |||||| ||||||||||||||  |||| | |||| |||| |||||||||    
T  4190734 ttaggttcattcaataaatgatgtatgaggtctatatataggctacatacataatttattgaatgaaactaaaaaatgaattttttcttataata 4190640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 2128405 - 2128490
Alignment:
Q  10 tttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||| ||||||||| |||| ||||||||||| || | |||||||||||||||||||||| ||||   |||| |||| |||||||||    
T  2128405 tttaataaatgatgcatgtagtctatatatagaccacatacatcatttattgaatgaatctaaaacatgaatttttgcttataata 2128490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 39836957 - 39836908
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaat 64  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  39836957 taaatgatgtatgtggtctatatatagaatacatacatcatttattgaat 39836908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 36571468 - 36571386
Alignment:
Q  13 attaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||| || | |||||||| |||| |||||||||||||||||| ||| |||| |   ||||||| |||||||||    
T  36571468 attaaatgatgtatatgatttatatatagactacatacatcatttattgaataaatctaaaaaagaaacttttgcttataata 36571386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 50466902 - 50466820
Alignment:
Q  17 aatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    |||||| ||||||||||||||| | |  |||||||||||| ||||||||||| ||||   | || ||||||||||||||||||    
T  50466902 aatgatatatgtggtctatataaagatcatatacatcattaattgaatgaatctaaaatataaatttttacttataataatga 50466820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 331844 - 331905
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||| ||| | | ||||||||||||||| ||||||||| ||||    
T  331844 attaaatgatgtatgtggtctataataaagattatatacatcatttaatgaatgaatctaaa 331905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 2128453 - 2128408
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttatt 60  Q
    |||||||||||||||||||||||||| |||| || |||||||||||    
T  2128453 taaatgatgtatgtggtctatatatagactacatgcatcatttatt 2128408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 12744995 - 12744934
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||| ||| | || |||||||||||| ||||||||||| ||||    
T  12744995 attaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatctaaa 12744934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 14756512 - 14756419
Alignment:
Q  3 aggttaatttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||||||||| ||||||||||||||||||| ||| | || |||||||||||| | ||||| ||| ||||   | || ||||||||||||||    
T  14756512 aggttaatttatttaatgatgtatgtggtctataataaagaccatatacatcattaaatgaataaatctaaaatgtaaaattttacttataata 14756419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18409326 - 18409253
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| | |||||||||||||||||||| | |||  |||| |||| ||||||||||||||||||||||    
T  18409326 ttaggttcattcaataaatgatgtatgtggtctaaaatatggactacatacctcatttattgaatgaatttaaa 18409253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 22528902 - 22528959
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||| ||||||| | |||||||||| ||||||||||| ||||    
T  22528902 aatgatgtatgtggtctataatataaaccacatacatcattgattgaatgaatctaaa 22528959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 26121633 - 26121572
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||| ||| | || |||||||||||| ||||||||||| ||||    
T  26121633 attaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatctaaa 26121572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 26244474 - 26244413
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||| ||| | || |||||||||||| ||||||||||| ||||    
T  26244474 attaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatctaaa 26244413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 43493834 - 43493903
Alignment:
Q  9 atttattaaatgatgtatgtggtctatatataa-----actatatacatcatttattgaatgaatttaaa 73  Q
    ||||| |||||||||||||||||||||||||||     || ||||||||||||||||  |||||||||||    
T  43493834 atttaataaatgatgtatgtggtctatatataatatggaccatatacatcatttattagatgaatttaaa 43493903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 27707270 - 27707211
Alignment:
Q  15 taaatgatgtatgtggtctatata-taaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||| |||  || || ||||| |||||||||||||||||||||||    
T  27707270 taaatgatgtatgtggtctttattgtagacaatatatatcatttattgaatgaatttaaa 27707211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 54595836 - 54595918
Alignment:
Q  13 attaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||||||||| ||| || | || |||||||||||||| ||||||||| |||| |||  | ||||||||||||||    
T  54595836 attaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaatctaaa-attatatttttacttataata 54595918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 611616 - 611710
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||| |||||| | |||||||||||||| ||||||||||| || | |||||| ||||| ||||| ||  |||| | | ||||||| |||||||||    
T  611616 ttagattaattcaataaatgatgtatgtagtctatatatagaccacatacattatttaatgaattaacctaaaaagtcaacttttgcttataata 611710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 8256908 - 8256953
Alignment:
Q  50 catcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||||||||||||| | |||| ||||| ||||||||    
T  8256908 catcatttattgaatgaatttaaaaagtgaatttttatttataata 8256953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 19810940 - 19810997
Alignment:
Q  17 aatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||| |||||| ||| |||||| | |||||||||||| ||||||||||||||    
T  19810940 aatgatgtatatggtctttattataaaccacatacatcatttaatgaatgaatttaaa 19810997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 24722729 - 24722794
Alignment:
Q  9 atttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||||||| ||| | || |||||||| ||| ||||| ||||| ||||    
T  24722729 atttattaaatgatgtatgtggtctataataaatacaatatacattattaattgagtgaatctaaa 24722794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 27224626 - 27224687
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||| ||||| ||| ||| ||||||||||||||| ||||| ||| ||||    
T  27224626 attaaatgatgtatgtgatctataataaaaattatatacatcatttaatgaatcaatctaaa 27224687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 32833770 - 32833713
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||| ||| ||| ||||| |||||||||| |||||||||| |||||    
T  32833770 aatgatgtatgtggtccatattatgaactacatacatcattaattgaatgaacttaaa 32833713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32956452 - 32956525
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||||||| |||||||||||||||| ||| ||| || |||||| |||||| | ||||||||| ||||    
T  32956452 ttaggttcatttatttaatgatgtatgtggtccatattattaattatatatatcattaaatgaatgaatctaaa 32956525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 39530485 - 39530428
Alignment:
Q  17 aatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||| |||| ||| | |||||||||| |||||||||| |||||    
T  39530485 aatgatgtatgtggtctataatatgaaccacatacatcattaattgaatgaacttaaa 39530428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 45736733 - 45736794
Alignment:
Q  13 attaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||||||| || | |  || ||||||||| ||||||||||||||||    
T  45736733 attaaatgatgtatgtggtctataataaagatcatgtacatcattaattgaatgaatttaaa 45736794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 47334736 - 47334675
Alignment:
Q  13 attaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||| || |||||| || |||  |||||||||||| ||||||||||||||||    
T  47334736 attaaatgatgtatatgatctataataaaaatcatatacatcattaattgaatgaatttaaa 47334675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 1044029 - 1043965
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaat 64  Q
    ||||||| ||||| | ||||||||||||| |||||| ||||| ||| |||||||||| |||||||    
T  1044029 ttaggttcatttaattaatgatgtatgtgatctatattataagctacatacatcattaattgaat 1043965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 3020656 - 3020716
Alignment:
Q  9 atttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaat 68  Q
    |||||||||||||||||| || | |||| || | ||||||||||||||| |||||||||||    
T  3020656 atttattaaatgatgtatatgatatataataaagactatatacatcattaattgaatgaat 3020716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 4190677 - 4190757
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||| |||||||| | ||||||||| ||   |||||||||||||||||||||  |||| | | ||||||| |||||||||    
T  4190677 taaattatgtatgtagcctatatatagacctcatacatcatttattgaatgaacctaaaaagtcaacttttgcttataata 4190757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 10841795 - 10841735
Alignment:
Q  9 atttattaaatgatgtatgtggtcta-tatataaactatatacatcatttattgaatgaat 68  Q
    ||||| |||||||||||||| ||||| |||||| || | ||||| ||||||||||||||||    
T  10841795 atttaataaatgatgtatgtagtctaatatatagaccacatacaacatttattgaatgaat 10841735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36458664 - 36458730
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataa--actatatacatcatttattgaatga 66  Q
    ||||||| ||| | |||| ||||||||||||||||| ||||  |||| ||||||||||||||||||||    
T  36458664 ttaggttcattcaataaaagatgtatgtggtctata-ataaggactacatacatcatttattgaatga 36458730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37331633 - 37331689
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatt 56  Q
    ||||||| ||| |||||||||||||||||||| ||| ||||||| | ||||||||||    
T  37331633 ttaggttcattcattaaatgatgtatgtggtccatattataaaccacatacatcatt 37331689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 41743636 - 41743728
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaacaga 104  Q
    |||||||||||||| |||||||| ||| | || |||||||||||| | |||||||||  |||   | ||||||||||||||||| ||| ||||    
T  41743636 attaaatgatgtatatggtctataataaagaccatatacatcattaactgaatgaatccaaaatgtaaacttttacttataatagtgaccaga 41743728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 7313922 - 7313844
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataa 93  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| | |||||||||||||||||    
T  7313922 taaatgatgtatgtggtctatatatagactacatatatcatttattgaatgaatttaaaaagtgaacttttacttataa 7313844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 13654543 - 13654637
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||| ||| | |||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| | |||| |||| |||||||||    
T  13654543 ttaggttcattcaataaatgatgtatgtggtccatatatagactaaatacatcatttattgaatgaatttaaaaagtgaatttttgcttataata 13654637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 25713790 - 25713710
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| |||||||||||| ||||||||    
T  25713790 taaatgatatatgtggtctatatatagacgatatacataatttactgaatgaatttaaaaattgaacttttatttataata 25713710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 1098725 - 1098639
Alignment:
Q  9 atttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||| ||||| |||||||| ||||||||||| || | |||||||||||||||||||||| |||| | | |||||||||||||||||    
T  1098725 atttaataaataatgtatgtagtctatatatagaccacatacatcatttattgaatgaatctaaaaagtcaacttttacttataata 1098639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 27896002 - 27895908
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||| ||||| |||||||||||||||  ||||||||| |||| |||||||||||||| ||||||| |||| | |||||||||  ||||||||    
T  27896002 ttaggttcatttaataaatgatgtatgtgacctatatatagactacatacatcatttattaaatgaatctaaaaaatgaacttttgtttataata 27895908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 1098676 - 1098756
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||||||||||||||| |||| |||||| ||||||| ||||||| |||| | | ||||||| |||||||||    
T  1098676 taaatgatgtatgtggtctatatatagactacatacattatttattaaatgaatctaaaaaataaacttttgcttataata 1098756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 40100129 - 40100193
Alignment:
Q  9 atttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||| |||||||||| |||||||||||||| ||||| |||||||||||| ||||||||| ||||    
T  40100129 atttaataaatgatgtgtgtggtctatatatgaactacatacatcatttactgaatgaatctaaa 40100193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 16899729 - 16899813
Alignment:
Q  9 atttattaaatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaagattgaacttttacttata 92  Q
    ||||||||||||| |||||| |||||||| ||||| ||||||||||||||| ||||||||  |||| ||  ||||||| ||||||    
T  16899729 atttattaaatgacgtatgtagtctatattataaattatatacatcatttaatgaatgaacctaaaaatcaaacttttgcttata 16899813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 31706004 - 31706092
Alignment:
Q  12 tattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    |||||||| ||||||||||||||| ||| ||| ||||||||| ||| ||| ||||||||||||   | || ||||||||||||||||||    
T  31706004 tattaaattatgtatgtggtctataataaaaattatatacattattaattaaatgaatttaaaatgtaaatttttacttataataatga 31706092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 25358106 - 25358194
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaacaga 104  Q
    ||||||||| ||||| |||| ||| | ||| ||||||||||||||||||||||  ||||   ||||||||||||||||||| ||| ||||    
T  25358106 taaatgatgaatgtgatctacata-atactgtatacatcatttattgaatgaacataaaatgtgaacttttacttataatagtgaccaga 25358194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 7313879 - 7313959
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||| ||||| ||||||||||| || | |||||||||||||||| ||||  |||| | | ||||||| |||||||||    
T  7313879 taaatgatatatgtagtctatatatagaccacatacatcatttattgattgaacctaaaaagtcaacttttgcttataata 7313959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 25713747 - 25713831
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    ||||| |||||| | ||||||||||| || | ||| |||||||||||||||||| |||| | | |||||||  ||||||||||||    
T  25713747 taaattatgtatatcgtctatatatagaccacatatatcatttattgaatgaatctaaaaaatcaacttttgtttataataatga 25713831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1100163 - 1100064
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    |||| |||||| |||||||||||||||| |||| ||| ||| || | |||||||||||| ||||||||| ||||   | ||||||| ||||||| |||||    
T  1100163 ttagattaattcattaaatgatgtatgtagtctttattatagaccacatacatcatttaatgaatgaatctaaaatgtaaacttttgcttataacaatga 1100064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 2673895 - 2673954
Alignment:
Q  15 taaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||| ||||| |||| || ||||||||||||||| ||| ||||    
T  2673895 taaatgatgtatgtggtctataatatagactacatgcatcatttattgaataaatctaaa 2673954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4162909 - 4162842
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaa 67  Q
    ||||||| ||| ||| |||||||||||||||||||| ||| ||| |||||||||||| | ||||||||    
T  4162909 ttaggttcattcatttaatgatgtatgtggtctatattatgaaccatatacatcattaaatgaatgaa 4162842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 10495303 - 10495224
Alignment:
Q  15 taaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataa 93  Q
    ||||||||| ||||| |||||| ||||||| | |||||||||||||||||||||| |||| | | ||  |||||||||||    
T  10495303 taaatgatgaatgtgatctataatataaaccacatacatcatttattgaatgaatctaaaaaatcaaaatttacttataa 10495224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 15966006 - 15966057
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaa 67  Q
    |||||||||||||||||||| ||||||| | |||||||||| ||||||||||    
T  15966006 aatgatgtatgtggtctatattataaaccacatacatcattaattgaatgaa 15966057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 18942076 - 18942025
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaa 67  Q
    |||||||||||||||||||| ||| ||| |||||||||||| ||||||||||    
T  18942076 aatgatgtatgtggtctatattatgaaccatatacatcattaattgaatgaa 18942025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 40100178 - 40100092
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaac 101  Q
    |||||||||||||| ||  ||||||| || | | |||||||||||| |||||||||||| | | || |||| ||||||||| |||||    
T  40100178 taaatgatgtatgtagttcatatatagaccacacacatcatttattaaatgaatttaaaaagtcaatttttgcttataatagtgaac 40100092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 1100103 - 1100164
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||| ||| | |||| |||||||||||| ||||| ||| ||||    
T  1100103 attaaatgatgtatgtggtctataataaagactacatacatcatttaatgaattaatctaaa 1100164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6279444 - 6279517
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| | ||||||||||||||||||||| ||||  || | |||||| ||||||||||||||| ||||    
T  6279444 ttaggttcattcactaaatgatgtatgtggtctataatatggaccacatacataatttattgaatgaatataaa 6279517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 10437735 - 10437671
Alignment:
Q  9 atttattaaatgatgtatgtggtctatatataaact-atatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||| |||||||| ||||||| ||||| | |||||||||| | ||||||||||||||||    
T  10437735 atttattaaattatgtatgtagtctata-ataaaatcatatacatcactaattgaatgaatttaaa 10437671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 11795830 - 11795769
Alignment:
Q  13 attaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||| ||||||||||||| || | || |||||||||||| ||||||||||| ||||    
T  11795830 attaaatgatatatgtggtctataataaagaccatatacatcattaattgaatgaatctaaa 11795769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 13391590 - 13391533
Alignment:
Q  47 atacatcatttattgaatgaatttaaagattgaacttttacttataataatgaacaga 104  Q
    |||||||||||||||||||||| |||| | |  |||||||||||||||| ||| ||||    
T  13391590 atacatcatttattgaatgaatctaaaaagttgacttttacttataatagtgaccaga 13391533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 15062331 - 15062392
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| || ||| |||||||| ||| ||||||||||||||||| | ||||||||||||||    
T  15062331 attaaattatttatatggtctattataaaaactatatacatcattaaatgaatgaatttaaa 15062392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31691079 - 31691006
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| ||| |||||||||| ||||||||| ||| ||| |||||||||||| | |||||||| |||||    
T  31691079 ttaggttcattcatttaatgatgtatctggtctataatatgaaccatatacatcattaaatgaatgaacttaaa 31691006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 3161279 - 3161327
Alignment:
Q  20 gatgtatgtggtctatat-ataaactatatacatcatttattgaatgaa 67  Q
    ||||||||||||| |||| |||||| |||||||||||| ||||||||||    
T  3161279 gatgtatgtggtccatattataaaccatatacatcattaattgaatgaa 3161327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8221977 - 8222013
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatat 37  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  8221977 ttaggttcatttatttaatgatgtatgtggtctatat 8222013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 13654600 - 13654548
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaa 67  Q
    |||||||||||| | ||||||||||  || | |||||||||||||||||||||    
T  13654600 taaatgatgtatttagtctatatatggaccacatacatcatttattgaatgaa 13654548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 14303108 - 14303156
Alignment:
Q  47 atacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||| |||||||||||||||||||||| |||| ||||  ||||||||    
T  14303108 atacattatttattgaatgaatttaaagaatgaatttttgtttataata 14303156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 22650898 - 22650946
Alignment:
Q  9 atttattaaatgatgtatgtggtctat-atataaactatatacatcatt 56  Q
    ||||||||||||||||||||||||||| ||| | || ||||||||||||    
T  22650898 atttattaaatgatgtatgtggtctataataaagaccatatacatcatt 22650946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32911504 - 32911560
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctat-atataaactatatacatcatt 56  Q
    ||||||| |||||||||||||||||| | |||||| ||||| |||| ||||||||||    
T  32911504 ttaggttcatttattaaatgatgtatttagtctataatatagactaaatacatcatt 32911560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 36759441 - 36759493
Alignment:
Q  47 atacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    |||||||||||||||||||||  |||| | |||| |||| |||||||||||||    
T  36759441 atacatcatttattgaatgaacgtaaaaagtgaatttttccttataataatga 36759493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 95
Target Start/End: Original strand, 36864507 - 36864551
Alignment:
Q  51 atcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||||||| |||| | |||||||||| ||||||||    
T  36864507 atcatttattgaatgaatctaaaaagtgaacttttatttataata 36864551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 36897825 - 36897753
Alignment:
Q  24 tatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||| ||| |||||| | |||||||||||||| ||||||||||||   | || ||||||||||||||    
T  36897825 tatgtggtctttattataaaccacatacatcatttatttaatgaatttaaaatgtaaatttttacttataata 36897753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 8169131 - 8169225
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||| ||| | |||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||| | | ||||||| |||||||||    
T  8169131 ttaggttcattcaataaatgatgtatgtggtctatatatagactacatacatcatttattgaatgaatctaaaaagttaacttttgcttataata 8169225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 21099278 - 21099372
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||| ||| | ||||||||||| |||||||||||||| |||| |||| ||||||||||||||||| |||| | |||||||||||||||||||    
T  21099278 ttaggttcattcaataaatgatgtaagtggtctatatatagactacatacgtcatttattgaatgaatataaaaagtgaacttttacttataata 21099372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 30457779 - 30457859
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||||||||||| |||||||||| || | ||||| ||||||||||||||||||||| | |||||||||||||||||||    
T  30457779 taaatgatgtatgtgatctatatatagacaacatacaacatttattgaatgaatttaaaaagtgaacttttacttataata 30457859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 32599768 - 32599696
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| |||||||||||| ||||||||||||||| |||| |||||||||||||||||||||| ||||    
T  32599768 ttaggttcattcattaaatgatgtttgtggtctatatatagactacatacatcatttattgaatgaatctaaa 32599696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 11602802 - 11602896
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||| ||| ||||||| |||||||||  ||||||||| |||| |||||||||||||||||||||| |||| | |||||||||  ||||||||    
T  11602802 ttaggttcattcattaaattatgtatgtgaactatatatagactacatacatcatttattgaatgaatctaaaaagtgaacttttgtttataata 11602896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 38940268 - 38940348
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||| ||| |||||||||||||||| |||| |||||||||||||| |||||||||||| | |||| ||||| ||||||||    
T  38940268 taaataatgaatgtggtctatatatagactacatacatcatttattaaatgaatttaaaaagtgaatttttaattataata 38940348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 8169188 - 8169104
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    |||||||||||||| ||||||||||| || | |||||||||||||||||||||  |||| |   ||||||| |||||||||||||    
T  8169188 taaatgatgtatgtagtctatatatagaccacatacatcatttattgaatgaacctaaaaagccaacttttgcttataataatga 8169104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 30457822 - 30457742
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||| ||||||| ||||||||||| |  | ||||||||||||||||||||| ||||||| | || ||||||||||||||    
T  30457822 taaatgttgtatgttgtctatatatagatcacatacatcatttattgaatgaacttaaagaatcaatttttacttataata 30457742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 19688197 - 19688138
Alignment:
Q  9 atttattaaatgatgtatgtggtctatata-taaactatatacatcatttattgaatgaa 67  Q
    ||||| |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  19688197 atttaataaatgatgtatgtggtctacataataaactacatacatcatttattgaatgaa 19688138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 34840687 - 34840621
Alignment:
Q  33 tatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    |||||||| | || |||||||||||||||||||||| |||| | ||||||||| |||||||||||||    
T  34840687 tatatatatattacatacatcatttattgaatgaatctaaaaagtgaacttttgcttataataatga 34840621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 27163199 - 27163292
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataa 93  Q
    ||||||| ||| | |||||||||||||||||||||| ||||||| | |||||||||||||| | ||||| |||| | ||||  |||||||||||    
T  27163199 ttaggttcattgaataaatgatgtatgtggtctatattataaaccacatacatcatttatttagtgaatctaaaaagtgaaaatttacttataa 27163292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 43813217 - 43813136
Alignment:
Q  15 taaatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||||||| |||| ||| |||| |||| ||||||||||||||||| |||| ||| || |||| |||||||||    
T  43813217 taaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaaattaaatttttgcttataata 43813136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 16777990 - 16777906
Alignment:
Q  9 atttattaaatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaagattgaacttttacttata 92  Q
    |||||||||||||||||||| |||| ||| ||| |||| |||||||||||| | ||||||| |||| ||| ||||||| ||||||    
T  16777990 atttattaaatgatgtatgtagtctttattatagactacatacatcatttaataaatgaatctaaaaattaaacttttgcttata 16777906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 10246121 - 10246074
Alignment:
Q  17 aatgatgtatgtggtctatatataaactatatacatcatttattgaat 64  Q
    |||||||||||||||||||||| | |||| ||||||||||||||||||    
T  10246121 aatgatgtatgtggtctatataaagactacatacatcatttattgaat 10246074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 38940317 - 38940227
Alignment:
Q  9 atttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    ||||| |||||||||||||| ||||||||||| || | || ||| ||||||||||||||| ||||   | || |||| |||||||||||||    
T  38940317 atttaataaatgatgtatgtagtctatatatagaccacattcattatttattgaatgaatctaaaatgtcaatttttgcttataataatga 38940227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 9555354 - 9555293
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||| ||| ||| | ||||||||||||||| ||||||| ||||||||    
T  9555354 attaaatgatgtatgtggtttatgataaagactatatacatcattaattgaataaatttaaa 9555293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 18654594 - 18654675
Alignment:
Q  15 taaatgatgtatgtggtctatata-taaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||| |||||||||||||||||| || || |||||||||||||||| ||| ||| |||| | | ||||| |||||||||||    
T  18654594 taaataatgtatgtggtctatataatataccatatacatcatttattaaataaatctaaaaaataaacttgtacttataata 18654675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 18820023 - 18819938
Alignment:
Q  15 taaatgatgtatgtggtctatatataa-actatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    |||||||||||||| ||||||||  || | || ||| ||||||||||||| ||||| |||   |||||||||||||||||||||||    
T  18820023 taaatgatgtatgttgtctatattaaagattacatatatcatttattgaaagaattcaaaatatgaacttttacttataataatga 18819938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 30138834 - 30138895
Alignment:
Q  13 attaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||| ||||||||||| || | ||||||||||||||| ||||||||||| ||||    
T  30138834 attaaatgatgtgtgtggtctataataaagactatatacatcattaattgaatgaatctaaa 30138895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 46221184 - 46221111
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||||| | |||||||||||||||| ||| ||||||| | |||||||||| |||||||||| |||||    
T  46221184 ttaggttcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacttaaa 46221111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 3341979 - 3341923
Alignment:
Q  17 aatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||| || |||||| ||| |||||||||||| ||||||||||| ||||    
T  3341979 aatgatgtatgtgatccatatatgaaccatatacatcattaattgaatgaatataaa 3341923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12088845 - 12088913
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaat 68  Q
    |||| ||||||||||||||||||| | |||||||| ||| | |||||||||| |||| |||||||||||    
T  12088845 ttagattaatttattaaatgatgtgtatggtctatgataaagactatatacaacattaattgaatgaat 12088913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 24280868 - 24280928
Alignment:
Q  14 ttaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||| |||||||||||||||| || | | ||||||||||||| ||||||||||||||||    
T  24280868 ttaaataatgtatgtggtctataataaatattatatacatcattaattgaatgaatttaaa 24280928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 19532003 - 19532054
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaa 67  Q
    |||||||||||||||| ||| ||||||||| |||||||||| ||||||||||    
T  19532003 aatgatgtatgtggtccatattataaactacatacatcattaattgaatgaa 19532054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 37930768 - 37930701
Alignment:
Q  34 atatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaac 101  Q
    ||||||||| |||||||||||||||| |||| || |||||   |||| ||||| ||||||||||||||    
T  37930768 atatataaattatatacatcatttatggaataaacttaaaatgtgaatttttatttataataatgaac 37930701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 39970247 - 39970196
Alignment:
Q  17 aatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaa 67  Q
    ||||||||||||||||||| |||||||| | |||||||||| ||||||||||    
T  39970247 aatgatgtatgtggtctataatataaaccacatacatcattgattgaatgaa 39970196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 46384401 - 46384485
Alignment:
Q  13 attaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    |||||||||||  |||||||||||||  ||| ||||| || ||||| ||||||||||||||   |||| |||| |||||||||||||    
T  46384401 attaaatgatgcgtgtggtctatata--aaccatatatataatttaatgaatgaatttaaaatatgaatttttgcttataataatga 46384485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 48873022 - 48873068
Alignment:
Q  47 atacatcatttattgaatgaatttaaagattgaacttttacttataa 93  Q
    |||||| | |||||||||||||||||| ||||||||||| |||||||    
T  48873022 atacattaattattgaatgaatttaaaaattgaacttttgcttataa 48873068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 3345134 - 3345085
Alignment:
Q  24 tatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||| || |||||||||| |||||||||||  ||||||||||||||||    
T  3345134 tatgtgatccatatataaacaatatacatcatcaattgaatgaatttaaa 3345085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 3498384 - 3498327
Alignment:
Q  17 aatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||| |||| |||||| | |||||||||| ||||||||||| ||||    
T  3498384 aatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaatctaaa 3498327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 21586856 - 21586921
Alignment:
Q  9 atttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||||||||||||||||||| ||| | |  |||||||||||| ||||||||||| ||||    
T  21586856 atttattcaatgatgtatgtggtctataataaagatcatatacatcattaattgaatgaatctaaa 21586921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 28752173 - 28752088
Alignment:
Q  13 attaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataat 97  Q
    |||||||||| ||| ||||| ||| |||| || | |||||||||||| |||||||| ||||| | | ||||||| |||||||||||    
T  28752173 attaaatgatatatttggtcaataatatagaccaaatacatcatttaatgaatgaaattaaaaagttaacttttgcttataataat 28752088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 32389205 - 32389262
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||| |||| ||| ||  | |||||||||||||||||||||||||||    
T  32389205 aatgatgtatgtggtttataatatgaatcacatacatcatttattgaatgaatttaaa 32389262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 33471580 - 33471523
Alignment:
Q  17 aatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||| |||| ||| | |||||||||| ||||||||||| ||||    
T  33471580 aatgatgtatgtggtctataatatgaaccacatacatcattaattgaatgaatctaaa 33471523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 35216574 - 35216509
Alignment:
Q  9 atttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||| ||||||||||||||||||| || | ||||| | ||| |||||||||||||||||| ||||    
T  35216574 atttagtaaatgatgtatgtggtctttactgtaaacaacatatatcatttattgaatgaatctaaa 35216509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 39970207 - 39970264
Alignment:
Q  17 aatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||| ||||| ||| || | |||||||||| ||||||||||||||||    
T  39970207 aatgatgtatgtggtttatattatagaccacatacatcattgattgaatgaatttaaa 39970264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 41888779 - 41888836
Alignment:
Q  17 aatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||| |||| || ||| |||||||||||| | ||||||||||||||    
T  41888779 aatgatgtatgtggtccatattatgaaccatatacatcattaaatgaatgaatttaaa 41888836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2851082 - 2851046
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatat 37  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  2851082 ttaggttcatttatttaatgatgtatgtggtctatat 2851046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 11602859 - 11602779
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||| |||||||||||    | |||||| ||||| ||||||||  |||| | | |||||||||||||||||    
T  11602859 taaatgatgtatgtagtctatatatagttcacatacataatttaatgaatgaacctaaaaaatcaacttttacttataata 11602779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 16777934 - 16777994
Alignment:
Q  9 atttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaat 68  Q
    |||||||||||||||||||| |||||| ||| | |||| |||||||||||| | |||||||    
T  16777934 atttattaaatgatgtatgtagtctataataaagactacatacatcatttaataaatgaat 16777994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 21099335 - 21099283
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaa 67  Q
    ||||||| |||||| ||||||||||| || |  ||||||||||||||||||||    
T  21099335 taaatgacgtatgtagtctatatatagaccacttacatcatttattgaatgaa 21099283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 21387674 - 21387614
Alignment:
Q  9 atttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaat 68  Q
    ||||| ||||||||||||||||| ||| ||| | |||| |||||||||| |||||||||||    
T  21387674 atttaataaatgatgtatgtggtatataataaagactacatacatcattaattgaatgaat 21387614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 32599711 - 32599763
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaa 67  Q
    |||||||||||||| ||||||||||| || | | |||||||||| ||||||||    
T  32599711 taaatgatgtatgtagtctatatatagaccacaaacatcatttaatgaatgaa 32599763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 39960281 - 39960345
Alignment:
Q  10 tttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||| ||||||||| ||||||| |||| || |||||| ||| |||||| ||||||||||||||||    
T  39960281 tttaataaatgatgcatgtggtttataataaaaactacatatatcattaattgaatgaatttaaa 39960345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 41824366 - 41824272
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||| ||| | ||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||| | |||| |||| |||||||||    
T  41824366 ttaggttcattcaataaatgatgtatgtggtctatatataaactacatacataatttattgaatgaatctaaaaaatgaatttttgcttataata 41824272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 43893165 - 43893245
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||| || |||||||||| || ||||||| ||||||||||||||| ||| | |||||| ||||| ||||||||    
T  43893165 taaatgatgtatatgatctatatatagaccatatacaccatttattgaatgaacttataaattgaatttttatttataata 43893245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 14952859 - 14952776
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||||||||||||| ||||| ||||| |||| || |||||||||||||||||||||||| |   ||||||| |||||||||    
T  14952859 attaaatgatgtatgtgatctattatatagactacatgcatcatttattgaatgaatttaaaaagcaaacttttgcttataata 14952776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 32143448 - 32143513
Alignment:
Q  9 atttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||| ||| ||| | ||||||||| ||||| ||||||||||||||||    
T  32143448 atttattaaatgatgtatgtggtttatgataaagactatatacttcattaattgaatgaatttaaa 32143513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 41805368 - 41805307
Alignment:
Q  13 attaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||| ||||||||| || | ||||||||||||||| ||||||||||||||||    
T  41805368 attaaatgatgtatatggtctataataaagactatatacatcattaattgaatgaatttaaa 41805307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 44274590 - 44274667
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttata 92  Q
    |||||||| ||||| ||||||||| | |||| |||||||||||||||||||||| |||| | |||| |||| ||||||    
T  44274590 taaatgatatatgtagtctatatacagactacatacatcatttattgaatgaatctaaaaagtgaatttttgcttata 44274667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18731305 - 18731377
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| | ||||||||||||||| ||||| |||| |||| |||||| ||||||||||||||| ||||    
T  18731305 ttaggttgattcaataaatgatgtatgtgatctatgtatagactacatacattatttattgaatgaatctaaa 18731377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 45472501 - 45472421
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||| |||||||| ||  | ||||| |||| ||||||||||||||||||||||||||| | | || ||||||||||||||    
T  45472501 taaataatgtatgtagttcacatatagactacatacatcatttattgaatgaatttaaaaagtaaatttttacttataata 45472421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 3198050 - 3197991
Alignment:
Q  15 taaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||| |||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||    
T  3198050 taaataatgtatgtggtctataatatgaactacatacatcatgtattgaatgaatttaaa 3197991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 44274633 - 44274575
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||| |||| |||||| |||| ||| |||||||||||||||||| ||||    
T  44274633 taaatgatgtatgtagtctgtatatagactacatatatcatttattgaatgaatctaaa 44274575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 17866214 - 17866287
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||||| ||||||||||||||||||| || | ||||| | |||||| ||||||||||||||| ||||    
T  17866214 ttaggttcatttaataaatgatgtatgtggtctttattgtaaacaacatacataatttattgaatgaatctaaa 17866287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 37396294 - 37396237
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||| ||||||  |||||||||||| ||||||||||| ||||    
T  37396294 aatgatgtatgtggtctataatataaatcatatacatcattaattgaatgaatctaaa 37396237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38465823 - 38465896
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||| |||||| |||||||||||||||||||| || ||| | || |||||||||||| ||||||||||| ||||    
T  38465823 ttagattaattcattaaatgatgtatgtggtccataataaagaccatatacatcattaattgaatgaatctaaa 38465896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 41823847 - 41823774
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||||| | ||||||||||||||||||| |||||||  | |||||||||| ||| ||||||||||||    
T  41823847 ttaggttcatttaattaatgatgtatgtggtctataatataaatcaaatacatcattaattaaatgaatttaaa 41823774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 324885 - 324829
Alignment:
Q  18 atgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||| ||| ||||||||| |||||||||| |||||||||| |||||    
T  324885 atgatgtatgtggtccatattataaactacatacatcattaattgaatgaacttaaa 324829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27964318 - 27964390
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| | ||||| |||||||||||||||||||   ||| |||||||||||||| ||||||| ||||    
T  27964318 ttaggttcattcaataaattatgtatgtggtctatatatggtctagatacatcatttattaaatgaatctaaa 27964390  T

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Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35498227 - 35498155
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| | |||||||||||| |||||||| |||  | || |||||||||||||||||||||| ||||    
T  35498227 ttaggttcattcaataaatgatgtatttggtctatttattgattaaatacatcatttattgaatgaatctaaa 35498155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 43893208 - 43893156
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaa 67  Q
    |||||| ||||| ||||||||||||| |  |||||||||||||||||||||||    
T  43893208 taaatggtgtatatggtctatatatagatcatatacatcatttattgaatgaa 43893156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5144374 - 5144307
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaa 67  Q
    ||||||| ||||| | |||||||||||||||| ||| ||||||| | |||||||||| ||||||||||    
T  5144374 ttaggttcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaa 5144307  T

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Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7606251 - 7606184
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaa 67  Q
    ||||||| ||||| ||||||| ||||||||||| ||| |||||| | ||||||||||| |||||||||    
T  7606251 ttaggttcatttaataaatgaagtatgtggtctttataataaaccacatacatcatttgttgaatgaa 7606184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 10996336 - 10996253
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    |||||||||||||||||||| || | || |||||||||||| ||| ||||||||||||   | || |||| |||||||||||||    
T  10996336 aatgatgtatgtggtctataataaagaccatatacatcattaattcaatgaatttaaaatataaatttttgcttataataatga 10996253  T

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Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 17844041 - 17843990
Alignment:
Q  17 aatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaa 67  Q
    |||||||||||||||| |||| |||||| |||||||||||| ||||||||||    
T  17844041 aatgatgtatgtggtccatattataaaccatatacatcattaattgaatgaa 17843990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 37182910 - 37182849
Alignment:
Q  13 attaaatgatgtatgtggtctatatataaa--ctatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||||||| |||||  |||||||||||||||| | ||||||| ||||    
T  37182910 attaaatgatgtatgtggtctata-ataaaggctatatacatcatttaattaatgaatctaaa 37182849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 43542988 - 43542929
Alignment:
Q  36 atataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||| || ||||||||||||||||||| |||| | ||||||||  |||||||||    
T  43542988 atataaactagatgcatcatttattgaatgaatctaaaaagtgaactttctcttataata 43542929  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 11093576 - 11093634
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaattt 70  Q
    ||||||||||||||||||||||| ||| | ||||||||||| ||| ||| |||||||||    
T  11093576 attaaatgatgtatgtggtctataataaagactatatacataattaattaaatgaattt 11093634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 44094867 - 44094929
Alignment:
Q  33 tatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||| |||| ||||| |||||||| |||||||||||| |  |||||||| |||||||||    
T  44094867 tatatatagactacatacaacatttattaaatgaatttaaaaaacgaacttttgcttataata 44094929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 3098168 - 3098233
Alignment:
Q  9 atttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||| |||| || |||||||   |||||||||||| ||||||||| ||||    
T  3098168 atttattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaatctaaa 3098233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 4637061 - 4637114
Alignment:
Q  21 atgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||| ||||||| | |||||||||| ||||||||||| ||||    
T  4637061 atgtatgtggtctataatataaaccacatacatcattaattgaatgaatctaaa 4637114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 5580340 - 5580283
Alignment:
Q  17 aatgatgtatgtggtctatatat-aaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||||| ||||    
T  5580340 aatgatgtatgtggtctaaatattaaaccacatacatcattaattgaatgaatctaaa 5580283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 6166073 - 6166130
Alignment:
Q  17 aatgatgtatgtggtctatata-taaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||| ||| |||  ||||| |||||||| ||||||||||||||||||||    
T  6166073 aatgatgtatgtgatctctatcgtaaaccatatacataatttattgaatgaatttaaa 6166130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 10041632 - 10041575
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||| ||||||| | |||||||||| ||| ||||||| ||||    
T  10041632 aatgatgtatgtggtctatattataaaccacatacatcattaattaaatgaatctaaa 10041575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 10602336 - 10602401
Alignment:
Q  9 atttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||| ||||| |||||||||||||||| || | || |||||||||||| |||||||||| |||||    
T  10602336 atttagtaaataatgtatgtggtctataataaagaccatatacatcattaattgaatgaacttaaa 10602401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19613047 - 19612974
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| ||| ||||||||||||||||||| ||| ||||||| | ||||||| | ||||||||| ||||    
T  19613047 ttaggttcattcatttaatgatgtatgtggtctataataaaaactatgtgcatcattaaatgaatgaatctaaa 19612974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 23962327 - 23962380
Alignment:
Q  21 atgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||| |||| ||| ||||| ||||||||||||||||||||| ||||    
T  23962327 atgtatgtggtccatattatagactatgtacatcatttattgaatgaatctaaa 23962380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 26003469 - 26003542
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| |||||||||||||||| || |||| || | || |||||||||||| ||||||||||| ||||    
T  26003469 ttaggttcattcattaaatgatgtatgtagtatataataaagaccatatacatcattaattgaatgaatctaaa 26003542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 29573920 - 29573847
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||||| | ||||||||||||||| |||| |||  ||||||||||||||| ||| ||||||| ||||    
T  29573920 ttaggttcatttaattaatgatgtatgtggtttatattatggactatatacatcattaatttaatgaatctaaa 29573847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 30905158 - 30905231
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||||| | | |||||||||||||| ||| ||||||| | |||||||||| |||||||||| |||||    
T  30905158 ttaggttcatttaattattgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacttaaa 30905231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 31024217 - 31024278
Alignment:
Q  13 attaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||| ||| || | || |||||||||||||| ||||||||| ||||    
T  31024217 attaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaatctaaa 31024278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33052176 - 33052249
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||||||| || ||||||||||||| ||| ||||||| | |||||||||| | ||||||||| ||||    
T  33052176 ttaggtttatttatttaacgatgtatgtggtccatattataaaccacatacatcattaaatgaatgaatctaaa 33052249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35024372 - 35024445
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||| | | ||| ||||||||||||||| ||||| | ||||||||||||| | |||||||| |||||    
T  35024372 ttaggttaattcaatcaattatgtatgtggtctataatatagattatatacatcattaactgaatgaacttaaa 35024445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 37195146 - 37195085
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||| ||| | || |||||||||||| ||||| ||||| ||||    
T  37195146 attaaatgatgtatgtggtctataataaagaccatatacatcattaattgagtgaatctaaa 37195085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 38181806 - 38181867
Alignment:
Q  13 attaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||| |||| | || | ||||||||||||||| ||||||||||| ||||    
T  38181806 attaaatgatgtatgtgatctacaataaagactatatacatcattaattgaatgaatgtaaa 38181867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 41824309 - 41824386
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttata 92  Q
    ||||| |||||||| || |||||||| || | |||||||||||||||||||||  |||| | | || |||||||||||    
T  41824309 taaattatgtatgtagtttatatatagaccacatacatcatttattgaatgaacctaaaaagtcaatttttacttata 41824386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 44089474 - 44089559
Alignment:
Q  15 taaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    |||||||||||  ||||||||| |||| || | ||||||||| |||||||||||||||||   | || ||| ||||||||||||||    
T  44089474 taaatgatgtacatggtctataatatagaccacatacatcatgtattgaatgaatttaaaatgttaattttgacttataataatga 44089559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 45472458 - 45472507
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaat 64  Q
    |||||||||||||| |||||||| | ||||| |||||| |||||||||||    
T  45472458 taaatgatgtatgtagtctatatgtgaactacatacattatttattgaat 45472507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 800764 - 800800
Alignment:
Q  37 tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  800764 tataaaccatatacatcatttaatgaatgaatttaaa 800800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 9419488 - 9419432
Alignment:
Q  17 aatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||  |||||| ||| | |||||||||| | ||||||||||||||    
T  9419488 aatgatgtatgtggttcatatatgaaccagatacatcattaaatgaatgaatttaaa 9419432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 25899880 - 25899964
Alignment:
Q  9 atttattaaatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaagattgaacttttacttata 92  Q
    ||||||||||||| |||||| |||| ||| |||||||| |||| ||||||| | ||| ||| |||| ||  ||||||||||||||    
T  25899880 atttattaaatgacgtatgtagtctttattataaactacatacgtcatttaataaataaatctaaaaatcaaacttttacttata 25899964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 32630500 - 32630444
Alignment:
Q  13 attaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaat 68  Q
    |||||||||||||||| ||||||| || | || |||||||||||| |||||||||||    
T  32630500 attaaatgatgtatgtagtctataataaagaccatatacatcattaattgaatgaat 32630444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 44089515 - 44089459
Alignment:
Q  18 atgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||| |||| || || ||||||||||||| ||||||| ||||    
T  44089515 atgatgtatgtggtctatattatagaccatgtacatcatttattcaatgaatataaa 44089459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 24418929 - 24419007
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataa 93  Q
    |||||||||||||||||||||||||| || | |||||||||||||||||||||| |||| | |||| |||| |||||||    
T  24418929 taaatgatgtatgtggtctatatatagacgacatacatcatttattgaatgaatctaaaaagtgaatttttgcttataa 24419007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 13841953 - 13841859
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||| ||| | |||||||||||||| || ||||| || |||| ||||||||||||||||||||||||||| | | || |||| |||||||||    
T  13841953 ttaggttcattcaataaatgatgtatgtagtttatatgtagactaaatacatcatttattgaatgaatttaaaaagtaaatttttgcttataata 13841859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 24418972 - 24418914
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||| ||||||||||| || | ||||||||||||||||||||| |||||    
T  24418972 taaatgatgtatgtcgtctatatatagaccacatacatcatttattgaatgaacttaaa 24418914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 36308083 - 36307994
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaacaga 104  Q
    |||||||||||||  |||||||||| ||| | |||||||||||||||||||||  |||| | | |||||||| |||||||| ||| ||||    
T  36308083 taaatgatgtatgcagtctatatatgaaccacatacatcatttattgaatgaacctaaaaaatcaacttttatttataatagtgatcaga 36307994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 36308026 - 36308111
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaactttta 86  Q
    ||||||| ||| | |||||||||||||||||  ||||||| |||  |||||||||||||||||||||| |||| | |||| |||||    
T  36308026 ttaggttcattcaataaatgatgtatgtggttcatatatagactgcatacatcatttattgaatgaatctaaaaagtgaaatttta 36308111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 13841896 - 13841948
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaa 67  Q
    |||||||||||| | ||||| |||||||||| |||||||||||||||||||||    
T  13841896 taaatgatgtatttagtctacatataaactacatacatcatttattgaatgaa 13841948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 24820389 - 24820337
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaa 67  Q
    ||||||||||||||| ||| ||||||||| | |||||||||||||||||||||    
T  24820389 taaatgatgtatgtgatctttatataaaccacatacatcatttattgaatgaa 24820337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 37509033 - 37508969
Alignment:
Q  9 atttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||| ||||||||||||||| | |||||||| |||| ||| || ||||||||||||||||||||    
T  37509033 atttaataaatgatgtatgtgatatatatatatactacatatattatttattgaatgaatttaaa 37508969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 26998703 - 26998802
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    ||||||| |||||||||||||||||| ||||||| | |||  || | |||||||||||| | ||| |||||||| | | || ||||||||||||||||||    
T  26998703 ttaggtttatttattaaatgatgtatttggtctacattattgaccaaatacatcatttaataaataaatttaaaaagttaatttttacttataataatga 26998802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24820332 - 24820426
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    ||||||| ||| | ||||||||||||||||| |||||| | |  | |||||||||||||||||||||| |||| |  ||| |||| |||||||||    
T  24820332 ttaggttcattcaataaatgatgtatgtggtttatataaagatcacatacatcatttattgaatgaatctaaaaagagaatttttgcttataata 24820426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 14599683 - 14599748
Alignment:
Q  9 atttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||| ||||||||||||||||| ||| ||||| || ||||| || ||||||||||||||||||||    
T  14599683 atttaataaatgatgtatgtggtttattatatataccatatatattatttattgaatgaatttaaa 14599748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 17800720 - 17800631
Alignment:
Q  15 taaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatgaacaga 104  Q
    |||||||||| ||||||||||||||| |  |||| ||||||||||||||||||  |||  | | |||||||  |||||||||||| ||||    
T  17800720 taaatgatgtctgtggtctatatatagatcatatgcatcatttattgaatgaacctaataagtcaacttttgtttataataatgatcaga 17800631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 28882770 - 28882697
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| | |||||||| |||||||||||| ||||| || | |||||||||||||||||||||| ||||    
T  28882770 ttaggtttattcaataaatgatatatgtggtctattatatataccacatacatcatttattgaatgaatctaaa 28882697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 43295938 - 43295995
Alignment:
Q  17 aatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||| |||| ||| || | |||||||||||||||||||||||||||    
T  43295938 aatgatgtatgtggtccatattatagaccacatacatcatttattgaatgaatttaaa 43295995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6260643 - 6260715
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||||| |||||||||||||||  ||||||||| |  |||||  ||||||||||||||||| ||||    
T  6260643 ttaggtttatttaataaatgatgtatgtgacctatatatagatcatatatttcatttattgaatgaatctaaa 6260715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 12782972 - 12782924
Alignment:
Q  9 atttattaaatgatgtatgtggtctatatataaactatatacatcattt 57  Q
    ||||| ||||||||||||||| ||||||||| ||| |||||||||||||    
T  12782972 atttaataaatgatgtatgtgatctatatatgaacaatatacatcattt 12782924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 17800663 - 17800735
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||| ||| | ||||||||| || || |||||||||| || | | |||||||||||||||||||||||||    
T  17800663 ttaggttcattcaataaatgatgcatatgatctatatatagaccacagacatcatttattgaatgaatttaaa 17800735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 6189682 - 6189741
Alignment:
Q  15 taaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||| ||||| ||| |||| |||| |||||||||||||||||||||| ||||    
T  6189682 taaatgatgtatttggtcaataatatagactaaatacatcatttattgaatgaatctaaa 6189741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 13964511 - 13964452
Alignment:
Q  15 taaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||  ||||||||| |||| || | |||||||||||||||||||||||||||    
T  13964511 taaatgatgtacatggtctataatatagaccacatacatcatttattgaatgaatttaaa 13964452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17871797 - 17871864
Alignment:
Q  1 ttaggttaatttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaa 67  Q
    ||||||| ||| |||||||||||||| ||||| || ||||| |||| |||||||||||| ||||||||    
T  17871797 ttaggttcattcattaaatgatgtatttggtcaataatatagactaaatacatcatttaatgaatgaa 17871864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 19293106 - 19293055
Alignment:
Q  17 aatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaa 67  Q
    ||||||||||||||||||| |||||||| | |||||||||| ||||||||||    
T  19293106 aatgatgtatgtggtctataatataaaccacatacatcattgattgaatgaa 19293055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 3225883 - 3225813
Alignment:
Q  4 ggttaatttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||| ||| ||||||||||||||||||||||| ||| | |  |||||||||||| ||||||| ||||||||    
T  3225883 ggttcattcattaaatgatgtatgtggtctataataaagatcatatacatcattaattgaataaatttaaa 3225813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 33934129 - 33934178
Alignment:
Q  17 aatgatgtatgtggtctatatataaactatatacatcatttattgaatgaa 67  Q
    |||||||||||||||||||| |||||| | |||||||||| ||||||||||    
T  33934129 aatgatgtatgtggtctata-ataaaccacatacatcattgattgaatgaa 33934178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 2805855 - 2805920
Alignment:
Q  9 atttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||| |||||||||||| ||| | |  |||||||| ||| ||||||||||||||||    
T  2805855 atttattaaatgatatatgtggtctataataaagatcatatacattattaattgaatgaatttaaa 2805920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 7484711 - 7484650
Alignment:
Q  13 attaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||| ||| || | || |||||||||||||| ||||||||| ||||    
T  7484711 attaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaatctaaa 7484650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 10117016 - 10117077
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||||| ||| | |  |||||||||||| ||||||||||| ||||    
T  10117016 attaaatgatgtatgtggtctataataaatatcatatacatcattaattgaatgaatctaaa 10117077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 11295710 - 11295771
Alignment:
Q  13 attaaatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||| || ||||||| | || ||||||||| ||||||||| ||||    
T  11295710 attaaatgatgtatgtggtctttattataaaccacatgcatcatttaatgaatgaatctaaa 11295771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 24842105 - 24842076
Alignment:
Q  9 atttattaaatgatgtatgtggtctatata 38  Q
    ||||||||||||||||||||||||||||||    
T  24842105 atttattaaatgatgtatgtggtctatata 24842076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 33385213 - 33385278
Alignment:
Q  9 atttattaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||| |||||||||||||||||||||| ||| | | |||||| |||||| ||||||||||| ||||    
T  33385213 attttttaaatgatgtatgtggtctataataaatattatatatatcattaattgaatgaatctaaa 33385278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 40640324 - 40640385
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||| ||||||||| ||| | ||||| ||||||||| ||||||||||| ||||    
T  40640324 attaaatgatgtacgtggtctataataaagactatgtacatcattaattgaatgaatctaaa 40640385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 42631869 - 42631812
Alignment:
Q  17 aatgatgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||| |||| |||||| | |||||||||| ||||||||||| ||||    
T  42631869 aatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaatctaaa 42631812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 5888382 - 5888438
Alignment:
Q  13 attaaatgatgtatgtggtctat-atataaactatatacatcatttattgaatgaat 68  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| |||||||||||    
T  5888382 attaaatgatgtatgttgtctataataaagaccatatacatcattaattgaatgaat 5888438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 37509016 - 37509064
Alignment:
Q  47 atacatcatttattgaatgaatttaaagattgaacttttacttataata 95  Q
    |||||||||||||| |||||| ||||| | | |||||||||||||||||    
T  37509016 atacatcatttattaaatgaagttaaaaaatcaacttttacttataata 37509064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 21219 - 21130
Alignment:
Q  9 atttattaaatgatgtatgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    ||||| |||||||| |||||||||||||| || || ||||||||| |||||| |||||| ||||| | | |||||||||||||||||||||    
T  21219 atttaataaatgatatatgtggtctatat-tagaccatatacatcgtttatttaatgaacttaaaaagtcaacttttacttataataatga 21130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 12971 - 13045
Alignment:
Q  25 atgtggtctatatataaactatatacatcatttattgaatgaatttaaagattgaacttttacttataataatga 99  Q
    |||||||||||||||||   ||||| || ||||||||||||||| |||| | | |||||||||||||||||||||    
T  12971 atgtggtctatatataagtcatatatataatttattgaatgaatctaaaaagtaaacttttacttataataatga 13045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0756 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0756
Description:

Target: scaffold0756; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 3608 - 3551
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||| ||||||| | |||||||||| ||||||||||| ||||    
T  3608 aatgatgtatgtggtctataatataaaccacatacatcattgattgaatgaatctaaa 3551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 3464 - 3521
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||| ||||||| | |||||||||| ||||||||||| ||||    
T  3464 aatgatgtatgtggtctataatataaaccacatacatcattgattgaatgaatctaaa 3521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 133223 - 133170
Alignment:
Q  21 atgtatgtggtctatat-ataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||    
T  133223 atgtatgtggtctatattatagactatgtacatcatttattgaatgaatataaa 133170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 5438 - 5495
Alignment:
Q  17 aatgatgtatgtggtctata-tataaactatatacatcatttattgaatgaatttaaa 73  Q
    |||||||||||||||||||| ||||||| | |||||||||| ||| ||||||| ||||    
T  5438 aatgatgtatgtggtctatattataaaccacatacatcattaattaaatgaatctaaa 5495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 146014 - 146075
Alignment:
Q  13 attaaatgatgtatgtggtct-atatataaactatatacatcatttattgaatgaatttaaa 73  Q
    ||||||||||||||||||||| | ||| | || |||||||||||| ||||||||||| ||||    
T  146014 attaaatgatgtatgtggtctaaaataaagaccatatacatcattaattgaatgaatctaaa 146075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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