View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7739_low_69 (Length: 278)
Name: NF7739_low_69
Description: NF7739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7739_low_69 |
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Alignment Details
Target: chr4 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 43925649 - 43925910
Alignment:
| Q |
1 |
gtgctgtcccaagtttttcctccctcacaactacaatgtactccataatatcaattgcatcgtccaccctgaaatagaatatcatagtacatgaacaaaa |
100 |
Q |
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| T |
43925649 |
gtgctgtcccaagtttttcctccctcacaactacaatgtactctataatatcaattgcatcgtccaccctgaaatagaatatcatagtacatgaacaaaa |
43925748 |
T |
|
| Q |
101 |
taactttcacataatcatttcttatttggtcatatctaacctaaaagtctcaaaaaccatgaagcaagaaactacataccataccatatagcgtgggttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43925749 |
taactttcacataatcatttcttatttggtcatatctaacctaaaagtctcaaaaaccatgaagcaagaaactacataccataccatatagcgtgggttg |
43925848 |
T |
|
| Q |
201 |
gtttattcaaataatagacattatactaattttcaacattagtggtcctacttgattattag |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43925849 |
gtttattcaaataatagacattatactaattttcaacattagtggtcctacttgattattag |
43925910 |
T |
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