View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7739_low_83 (Length: 246)
Name: NF7739_low_83
Description: NF7739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7739_low_83 |
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Alignment Details
Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 34696861 - 34696654
Alignment:
| Q |
16 |
caccaaacatcctctcctttaatttttgagaaataataattgatagaccaataaaagtagatagacgaacatgttatgaacatatacgtgtccatttgta |
115 |
Q |
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| T |
34696861 |
caccaaacatcctctcctttaatttttgagaaataataattgatagaccaataaaagtagatagacgaacacgttatgaacatatacgtgtccatttgta |
34696762 |
T |
|
| Q |
116 |
caatatagtagtatacatataatgttgattaaattctttagtatcgtttaatttaaatttagggtgattttatttataccatgtttttgttttgttcatc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34696761 |
caatatagtagtatacatataatgttgattaaattctttagtatcgtttaatttaaatttagggtgattttatttataccatgtttttgttttgttcatc |
34696662 |
T |
|
| Q |
216 |
gttacagt |
223 |
Q |
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|||||||| |
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| T |
34696661 |
gttacagt |
34696654 |
T |
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