View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7739_low_94 (Length: 218)
Name: NF7739_low_94
Description: NF7739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7739_low_94 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 6916626 - 6916825
Alignment:
| Q |
19 |
tcaagtacacggtcctaaatttattgggggtagttatctagaaaaaagaattgtagttttggttcannnnnnngggtcaacaaaattttgaaagcaaata |
118 |
Q |
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| T |
6916626 |
tcaagtacacggtcctaaattttttgggggtagttatctggaaaaaagaattgtggttttggttcatttttttgggtcaacaaaattttgaaagcaaata |
6916725 |
T |
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| Q |
119 |
aaaagtagctataattgtgatagtgtacaatttggtgtcactccaatgtttttattgggaaacttgatttaatattaaatttatcatatatttgcgtttt |
218 |
Q |
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| T |
6916726 |
aaaagtagctataattgtgatagtgtacaatttggtgtcactccaatgtttttattgggaaacttgatttaacattaaatttatcatatatttgcgtttt |
6916825 |
T |
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