View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7743_low_17 (Length: 253)
Name: NF7743_low_17
Description: NF7743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7743_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 10599615 - 10599860
Alignment:
| Q |
1 |
ccaaactacacctaacacacaaatccaaaaccaaacccgacctaataacccacgaatgcaactccttcccaagcgacaaaaactgaatctcagcacacac |
100 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
10599615 |
ccaaactacacccaacacacaaatccaaaaccaaacccgacctaataacccacgaatgcaactccttcccaagcgacaaaaactgaatctcagcacaaac |
10599714 |
T |
|
| Q |
101 |
agatatcaacccagttaacgtaaacctatccggaacatacccactactcaccaacatctccaaaaacaaatcaatcgcatcatcattataaccatattga |
200 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |
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|
| T |
10599715 |
cgatatcaacccagtcaacgtaaatctatccggcacatacccactactcaccaacatttccaaaaacaaatcaatcgcttcatcattataaccatattga |
10599814 |
T |
|
| Q |
201 |
gctaacctagtaatcatcaaagtccacgtaacaacattcttctcac |
246 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
10599815 |
gctaacctagtaatcatcaaagtccacgtaacaacattcttctcac |
10599860 |
T |
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