View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7744_low_9 (Length: 278)

Name: NF7744_low_9
Description: NF7744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7744_low_9
NF7744_low_9
[»] chr7 (50 HSPs)
chr7 (98-193)||(39143242-39143337)
chr7 (98-193)||(40851866-40851961)
chr7 (98-257)||(22569990-22570149)
chr7 (97-193)||(7776822-7776918)
chr7 (98-193)||(18458640-18458735)
chr7 (98-193)||(37374323-37374418)
chr7 (98-193)||(48094937-48095032)
chr7 (99-193)||(45995363-45995457)
chr7 (98-191)||(712630-712723)
chr7 (104-193)||(5905226-5905315)
chr7 (98-193)||(15573512-15573608)
chr7 (105-193)||(27284482-27284570)
chr7 (98-189)||(27383218-27383309)
chr7 (98-193)||(44332393-44332488)
chr7 (98-193)||(12085724-12085818)
chr7 (98-193)||(23910660-23910754)
chr7 (19-57)||(21432795-21432833)
chr7 (98-193)||(3217620-3217715)
chr7 (98-193)||(5870150-5870245)
chr7 (98-142)||(23139906-23139950)
chr7 (98-142)||(24733997-24734041)
chr7 (98-142)||(29168978-29169022)
chr7 (98-193)||(41692021-41692116)
chr7 (98-142)||(45456971-45457015)
chr7 (19-54)||(22569886-22569921)
chr7 (19-54)||(23139998-23140033)
chr7 (19-54)||(23440712-23440747)
chr7 (19-54)||(41911578-41911613)
chr7 (100-193)||(43705044-43705137)
chr7 (98-193)||(29771436-29771532)
chr7 (102-142)||(12085509-12085549)
chr7 (98-142)||(28460855-28460899)
chr7 (98-142)||(32072570-32072614)
chr7 (98-142)||(35918272-35918316)
chr7 (157-193)||(40852085-40852121)
chr7 (98-193)||(44495945-44496040)
chr7 (98-193)||(36951153-36951247)
chr7 (229-263)||(29933709-29933743)
chr7 (229-263)||(32072323-32072357)
chr7 (229-263)||(36720992-36721026)
chr7 (98-191)||(20494095-20494187)
chr7 (98-193)||(23440784-23440880)
chr7 (27-56)||(28460798-28460827)
chr7 (101-142)||(29414361-29414402)
chr7 (152-193)||(34620311-34620352)
chr7 (229-257)||(7776488-7776516)
chr7 (98-142)||(21432709-21432753)
chr7 (229-257)||(23440492-23440520)
chr7 (22-54)||(27383344-27383376)
chr7 (229-257)||(37373997-37374025)
[»] scaffold0014 (1 HSPs)
scaffold0014 (98-193)||(230968-231063)
[»] scaffold0003 (2 HSPs)
scaffold0003 (98-193)||(305228-305323)
scaffold0003 (19-54)||(305144-305179)
[»] chr8 (50 HSPs)
chr8 (98-193)||(23017054-23017149)
chr8 (98-193)||(31988610-31988705)
chr8 (98-191)||(7116982-7117075)
chr8 (97-193)||(9115928-9116025)
chr8 (98-193)||(9739651-9739746)
chr8 (102-193)||(9807150-9807241)
chr8 (98-193)||(11713436-11713531)
chr8 (98-193)||(18475940-18476035)
chr8 (98-189)||(40229191-40229282)
chr8 (98-193)||(41154714-41154809)
chr8 (98-193)||(37035734-37035829)
chr8 (98-193)||(41658811-41658906)
chr8 (98-193)||(43978767-43978862)
chr8 (98-193)||(42194252-42194346)
chr8 (99-193)||(45434133-45434227)
chr8 (98-191)||(45123482-45123575)
chr8 (98-193)||(2221831-2221927)
chr8 (98-142)||(2621248-2621292)
chr8 (98-193)||(8272084-8272178)
chr8 (98-142)||(13093976-13094020)
chr8 (98-193)||(14724484-14724579)
chr8 (98-193)||(31446026-31446121)
chr8 (98-193)||(33098684-33098779)
chr8 (98-193)||(43086750-43086845)
chr8 (19-54)||(22013732-22013767)
chr8 (19-54)||(43273588-43273623)
chr8 (98-140)||(761810-761852)
chr8 (19-57)||(14724371-14724409)
chr8 (19-57)||(43086669-43086707)
chr8 (98-193)||(22013559-22013655)
chr8 (98-142)||(26060255-26060299)
chr8 (98-142)||(30864404-30864448)
chr8 (98-142)||(36032361-36032405)
chr8 (98-142)||(45466167-45466211)
chr8 (19-54)||(7791896-7791931)
chr8 (19-54)||(29090967-29091002)
chr8 (98-141)||(44978027-44978070)
chr8 (27-57)||(761891-761921)
chr8 (98-140)||(7999453-7999495)
chr8 (23-57)||(7999987-8000021)
chr8 (98-140)||(43633455-43633497)
chr8 (229-263)||(45433779-45433813)
chr8 (152-193)||(7812638-7812679)
chr8 (152-193)||(11760835-11760876)
chr8 (229-257)||(762170-762198)
chr8 (157-193)||(9807058-9807094)
chr8 (19-51)||(36032254-36032286)
chr8 (157-193)||(41154939-41154975)
chr8 (157-193)||(43633220-43633256)
chr8 (22-54)||(43633357-43633389)
[»] chr6 (20 HSPs)
chr6 (98-193)||(17383832-17383927)
chr6 (98-189)||(14527100-14527191)
chr6 (98-189)||(10914662-10914753)
chr6 (98-193)||(22498633-22498728)
chr6 (98-193)||(3619142-3619237)
chr6 (98-193)||(13703478-13703573)
chr6 (98-189)||(18683651-18683742)
chr6 (98-193)||(21271984-21272079)
chr6 (19-54)||(3619055-3619090)
chr6 (97-186)||(9424621-9424710)
chr6 (98-193)||(13839572-13839668)
chr6 (98-142)||(714666-714710)
chr6 (98-142)||(3366645-3366689)
chr6 (98-142)||(26392477-26392521)
chr6 (19-54)||(21271786-21271821)
chr6 (19-54)||(21271893-21271928)
chr6 (98-141)||(29175215-29175258)
chr6 (19-54)||(29175294-29175329)
chr6 (98-140)||(31739521-31739563)
chr6 (19-56)||(21271881-21271918)
[»] chr5 (32 HSPs)
chr5 (98-193)||(24100566-24100661)
chr5 (101-193)||(435651-435743)
chr5 (98-193)||(7265481-7265576)
chr5 (98-193)||(17340061-17340156)
chr5 (98-193)||(17420941-17421036)
chr5 (98-193)||(30112245-30112340)
chr5 (98-193)||(16669604-16669699)
chr5 (98-257)||(1030852-1031011)
chr5 (98-193)||(27098636-27098733)
chr5 (98-193)||(43387357-43387451)
chr5 (102-191)||(35001019-35001108)
chr5 (98-193)||(5186743-5186839)
chr5 (101-193)||(26888682-26888774)
chr5 (98-193)||(4959658-4959753)
chr5 (98-193)||(6157233-6157328)
chr5 (98-142)||(11079276-11079320)
chr5 (98-142)||(27121766-27121810)
chr5 (98-142)||(27850819-27850863)
chr5 (98-193)||(35773760-35773855)
chr5 (98-193)||(29962048-29962142)
chr5 (98-193)||(4821962-4822057)
chr5 (98-142)||(25586446-25586490)
chr5 (19-54)||(4821867-4821902)
chr5 (19-54)||(16669763-16669798)
chr5 (19-53)||(20243611-20243645)
chr5 (152-193)||(30012656-30012697)
chr5 (152-193)||(38312486-38312527)
chr5 (153-193)||(4077051-4077091)
chr5 (22-54)||(5595557-5595589)
chr5 (157-193)||(7265345-7265381)
chr5 (229-257)||(26888934-26888962)
chr5 (157-193)||(35774107-35774143)
[»] chr4 (45 HSPs)
chr4 (98-193)||(17475749-17475844)
chr4 (98-193)||(28504939-28505034)
chr4 (98-263)||(14947556-14947720)
chr4 (98-193)||(25618959-25619054)
chr4 (98-193)||(31488340-31488435)
chr4 (98-193)||(34237578-34237673)
chr4 (98-193)||(46307904-46307999)
chr4 (98-193)||(48453729-48453824)
chr4 (98-193)||(5904756-5904850)
chr4 (98-193)||(17259337-17259432)
chr4 (98-193)||(37208706-37208800)
chr4 (104-193)||(54037713-54037802)
chr4 (98-193)||(56270641-56270737)
chr4 (98-193)||(1098262-1098357)
chr4 (102-193)||(14525549-14525640)
chr4 (98-193)||(22307535-22307630)
chr4 (98-193)||(42369375-42369470)
chr4 (98-189)||(48091594-48091685)
chr4 (19-54)||(22309214-22309249)
chr4 (19-54)||(24045603-24045638)
chr4 (107-193)||(53652672-53652758)
chr4 (98-140)||(46579890-46579932)
chr4 (104-193)||(20614210-20614298)
chr4 (98-193)||(24045462-24045558)
chr4 (98-142)||(39321367-39321411)
chr4 (98-142)||(44303856-44303900)
chr4 (22-57)||(5696202-5696237)
chr4 (103-142)||(44795828-44795867)
chr4 (19-50)||(44795938-44795969)
chr4 (27-57)||(37208610-37208640)
chr4 (27-57)||(44303783-44303813)
chr4 (19-57)||(48091725-48091763)
chr4 (27-57)||(56270795-56270825)
chr4 (27-57)||(56270925-56270955)
chr4 (98-139)||(46058847-46058888)
chr4 (22-54)||(4767068-4767100)
chr4 (98-142)||(5696626-5696670)
chr4 (229-257)||(9181947-9181975)
chr4 (102-142)||(26673005-26673045)
chr4 (229-257)||(26673122-26673150)
chr4 (229-257)||(28505072-28505100)
chr4 (229-257)||(41845871-41845899)
chr4 (157-193)||(48091900-48091936)
chr4 (229-257)||(52574706-52574734)
chr4 (98-142)||(52575049-52575093)
[»] chr3 (32 HSPs)
chr3 (98-193)||(876755-876850)
chr3 (98-193)||(24242545-24242640)
chr3 (98-193)||(36174853-36174948)
chr3 (98-193)||(47872940-47873035)
chr3 (98-193)||(53246468-53246563)
chr3 (98-193)||(12740060-12740155)
chr3 (98-193)||(13355272-13355367)
chr3 (98-193)||(32309470-32309565)
chr3 (98-193)||(41263409-41263504)
chr3 (99-193)||(50530714-50530807)
chr3 (98-193)||(9242425-9242520)
chr3 (98-193)||(29191378-29191472)
chr3 (98-142)||(45940359-45940403)
chr3 (19-54)||(8100813-8100848)
chr3 (19-54)||(29191529-29191564)
chr3 (22-57)||(51675865-51675900)
chr3 (98-140)||(39198800-39198842)
chr3 (104-193)||(51675715-51675803)
chr3 (98-191)||(967077-967169)
chr3 (105-193)||(44711939-44712027)
chr3 (22-54)||(15986899-15986931)
chr3 (98-142)||(27990136-27990180)
chr3 (102-142)||(28919239-28919279)
chr3 (22-54)||(28919330-28919362)
chr3 (98-193)||(40503598-40503693)
chr3 (98-142)||(50530966-50531010)
chr3 (19-54)||(32309390-32309425)
chr3 (98-141)||(46370587-46370630)
chr3 (98-193)||(48946553-48946647)
chr3 (19-49)||(45940471-45940501)
chr3 (156-193)||(2814598-2814635)
chr3 (229-257)||(48946208-48946236)
[»] chr1 (54 HSPs)
chr1 (98-193)||(7334540-7334635)
chr1 (98-191)||(8678232-8678325)
chr1 (98-193)||(14244263-14244358)
chr1 (98-193)||(24370212-24370307)
chr1 (98-193)||(33145493-33145588)
chr1 (98-193)||(37483408-37483503)
chr1 (98-193)||(37708288-37708383)
chr1 (98-193)||(45678809-45678904)
chr1 (98-193)||(46448607-46448702)
chr1 (98-190)||(38979771-38979863)
chr1 (98-193)||(3798421-3798516)
chr1 (98-193)||(35968390-35968484)
chr1 (102-192)||(36985512-36985603)
chr1 (98-193)||(49548473-49548568)
chr1 (98-193)||(50227612-50227706)
chr1 (19-57)||(44114251-44114289)
chr1 (98-193)||(35122359-35122455)
chr1 (98-191)||(35968683-35968775)
chr1 (152-193)||(41723016-41723057)
chr1 (98-193)||(7121685-7121780)
chr1 (98-189)||(20258009-20258100)
chr1 (98-142)||(31488279-31488323)
chr1 (98-142)||(32320153-32320197)
chr1 (98-193)||(34023440-34023535)
chr1 (19-54)||(7334697-7334732)
chr1 (19-54)||(48984039-48984074)
chr1 (152-193)||(49148617-49148658)
chr1 (98-193)||(6137595-6137690)
chr1 (98-142)||(6714580-6714624)
chr1 (22-54)||(32193772-32193804)
chr1 (22-54)||(33171595-33171627)
chr1 (98-142)||(39851322-39851366)
chr1 (98-142)||(45678520-45678564)
chr1 (98-142)||(48983927-48983971)
chr1 (98-142)||(48984172-48984216)
chr1 (98-193)||(50138736-50138831)
chr1 (98-142)||(52179006-52179050)
chr1 (19-54)||(6714474-6714509)
chr1 (102-141)||(7049237-7049276)
chr1 (19-50)||(49548377-49548408)
chr1 (27-57)||(38902624-38902654)
chr1 (98-193)||(6328040-6328136)
chr1 (156-193)||(27526928-27526965)
chr1 (98-193)||(32193616-32193712)
chr1 (152-193)||(36213884-36213925)
chr1 (98-139)||(36967128-36967169)
chr1 (156-193)||(48497887-48497924)
chr1 (22-54)||(1039941-1039973)
chr1 (22-54)||(1046847-1046879)
chr1 (157-193)||(3798636-3798672)
chr1 (229-257)||(14244197-14244225)
chr1 (97-133)||(32193863-32193899)
chr1 (22-54)||(42616936-42616968)
chr1 (157-193)||(50227838-50227874)
[»] scaffold0054 (1 HSPs)
scaffold0054 (98-193)||(57118-57213)
[»] chr2 (45 HSPs)
chr2 (98-193)||(17976810-17976905)
chr2 (98-193)||(36313552-36313647)
chr2 (98-193)||(2970683-2970778)
chr2 (98-193)||(13479181-13479276)
chr2 (98-193)||(25334476-25334571)
chr2 (98-193)||(26424399-26424494)
chr2 (98-193)||(33200124-33200219)
chr2 (19-57)||(39109259-39109297)
chr2 (98-193)||(5381883-5381979)
chr2 (102-193)||(38806940-38807032)
chr2 (98-193)||(677480-677575)
chr2 (98-193)||(39107625-39107720)
chr2 (98-193)||(43820194-43820289)
chr2 (19-54)||(7674278-7674313)
chr2 (98-193)||(11713864-11713958)
chr2 (19-54)||(21532785-21532820)
chr2 (98-193)||(24181589-24181683)
chr2 (19-53)||(3202900-3202934)
chr2 (98-191)||(21532892-21532985)
chr2 (98-191)||(38536363-38536456)
chr2 (19-57)||(40537232-40537270)
chr2 (98-193)||(25479139-25479235)
chr2 (98-193)||(25486745-25486841)
chr2 (98-193)||(15136742-15136837)
chr2 (22-54)||(20237445-20237477)
chr2 (98-142)||(32194706-32194750)
chr2 (19-54)||(2804786-2804821)
chr2 (19-54)||(2970605-2970640)
chr2 (98-141)||(3202814-3202857)
chr2 (19-54)||(5381805-5381840)
chr2 (98-192)||(31557421-31557514)
chr2 (22-57)||(35668725-35668760)
chr2 (24-54)||(12966026-12966056)
chr2 (229-263)||(14287856-14287890)
chr2 (152-193)||(12965882-12965923)
chr2 (156-193)||(14288244-14288281)
chr2 (153-193)||(2804899-2804939)
chr2 (98-142)||(2822445-2822489)
chr2 (229-257)||(11713996-11714024)
chr2 (22-54)||(14847956-14847988)
chr2 (98-142)||(15044883-15044927)
chr2 (98-142)||(18469741-18469785)
chr2 (229-257)||(18470069-18470097)
chr2 (98-142)||(20558587-20558631)
chr2 (157-193)||(33200450-33200486)
[»] scaffold0006 (1 HSPs)
scaffold0006 (98-142)||(83264-83308)
[»] scaffold0005 (2 HSPs)
scaffold0005 (98-142)||(1840-1884)
scaffold0005 (157-193)||(1571-1607)
[»] scaffold0533 (1 HSPs)
scaffold0533 (19-54)||(4107-4142)
[»] scaffold0009 (4 HSPs)
scaffold0009 (19-54)||(217808-217843)
scaffold0009 (19-54)||(217904-217939)
scaffold0009 (98-188)||(218030-218119)
scaffold0009 (98-142)||(217719-217763)
[»] scaffold0043 (2 HSPs)
scaffold0043 (102-141)||(59891-59930)
scaffold0043 (19-57)||(59990-60028)
[»] scaffold0018 (1 HSPs)
scaffold0018 (98-193)||(133284-133378)
[»] scaffold0360 (1 HSPs)
scaffold0360 (102-142)||(12221-12261)
[»] scaffold0027 (3 HSPs)
scaffold0027 (98-142)||(40238-40282)
scaffold0027 (229-257)||(124968-124996)
scaffold0027 (98-142)||(125075-125119)


Alignment Details
Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 39143337 - 39143242
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||||||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  39143337 aaaactcagagccaatgacaaggtgacaagtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 39143242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 40851961 - 40851866
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  40851961 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 40851866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 22569990 - 22570149
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagactnnnn 197  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||        
T  22569990 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac-tttgttttaaaccctaacggaaacctaacagaagggaccaaaacgagactaaaa 22570088  T
Q  198 nnnncttaaaatattcaaacaatc-nnnnnnnagttaagggaccaaagcgatatcaattaa 257  Q
        ||||||||  ||||||||||        |||||||||||||||||||||||||||||    
T  22570089 aaaacttaaaatcctcaaacaatcttttttttagttaagggaccaaagcgatatcaattaa 22570149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 193
Target Start/End: Original strand, 7776822 - 7776918
Alignment:
Q  97 taaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | || |||| ||||||||||||||||    
T  7776822 taaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaaaagaagggaccaaaacgagact 7776918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 18458640 - 18458735
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| |||||||||||          ||||||||||||||| | ||||||| ||||||||||||||||    
T  18458640 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaatttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 18458735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 37374323 - 37374418
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||| ||||||||||||    
T  37374323 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggatcaaaacgagact 37374418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 48095032 - 48094937
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | |||||||  |||||||||||||||    
T  48095032 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagtgaccaaaacgagact 48094937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 45995457 - 45995363
Alignment:
Q  99 aaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||||||||| ||| | ||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  45995457 aaactcagagccaatgacaaggtgacacgtgtctaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 45995363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 712723 - 712630
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgaga 191  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||    
T  712723 aaaactcagagctaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgaga 712630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 193
Target Start/End: Complemental strand, 5905315 - 5905226
Alignment:
Q  104 cagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||| ||||||||||||||||| ||| ||||||||||||         ||||||||||||||||| ||||||| ||||||||||||||||    
T  5905315 cagaaccaatgacaaggtgacacgtgtccaggagttaactctttttaaaaaccctaacggaaatctaacagaagggaccaaaacgagact 5905226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 15573512 - 15573608
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac-nnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||          ||||||||||||||| | ||||||| ||||||||||||||||    
T  15573512 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttgaaaaccctaacggaaacctaacagaagggaccaaaacgagact 15573608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 27284482 - 27284570
Alignment:
Q  105 agagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  27284482 agagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 27284570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 27383309 - 27383218
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacga 189  Q
    |||||||||||||||||||||||||||| ||| ||||||| ||||         ||||||||||||||| | ||||||| ||||||||||||    
T  27383309 aaaactcagagccaatgacaaggtgacacgtgtccaggagctaactttttttttaaaccctaacggaaacctaacagaagggaccaaaacga 27383218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 44332393 - 44332488
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||| ||||| | ||| ||||||||||||         ||||||||||||||||| |||| || ||||||||||||||||    
T  44332393 aaaactcagagccaatgacagggtgaaatgtgtccaggagttaaccttttttttaaaccctaacggaaatctaacataagggaccaaaacgagact 44332488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 12085724 - 12085818
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||| ||||| ||||||| ||| ||||||||||||    
T  12085724 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac-ttttttttaaaccctaacgaaaatctaacagaaaggatcaaaacgagact 12085818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 23910754 - 23910660
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| |||  |||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  23910754 aaaactcagagccaatgacaaggtgacacgtgttcaggagttaac-tttttttaaaaccctaacggaaacctaacagaaaggaccaaaacgagact 23910660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 21432833 - 21432795
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttgaga 57  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21432833 gacaaggtgacacgtgtcactttgtcattggctttgaga 21432795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 3217620 - 3217715
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||| ||||||||||||||||||||| ||| |||| |||||||         |||| |||||||||| | ||||||| ||||||||||||||||    
T  3217620 aaaacttagagccaatgacaaggtgacacgtgtccagaagttaacttttttttaaaactctaacggaaacctaacagaagggaccaaaacgagact 3217715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 5870150 - 5870245
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||| |||||| ||| |||||||||||          ||||| ||||||||| | ||||||| ||||||||||||||||    
T  5870150 aaaactcagagccaatgacaaagtgacacgtgtccaggagttaatttttttttaaaaccttaacggaaacctaacagaagggaccaaaacgagact 5870245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 23139950 - 23139906
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  23139950 aaaactcagagccaatgacaaggtgacatgtgtccaggagttaac 23139906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 24733997 - 24734041
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  24733997 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac 24734041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 29169022 - 29168978
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  29169022 aaaactcagagccaatgacaaggtgacaggtgtccaggagttaac 29168978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 41692116 - 41692021
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||| |||||||||||||||| ||| || ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  41692116 aaaattcagagccaatgacaaagtggcacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 41692021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 45456971 - 45457015
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  45456971 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac 45457015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 22569886 - 22569921
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  22569886 gacaaggtgacacgtgtcactttgtcattggctttg 22569921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 23140033 - 23139998
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  23140033 gacaaggtgacacgtgtcactttgtcattggctttg 23139998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 23440712 - 23440747
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  23440712 gacaaggtgacacgtgtcactttgtcattggctttg 23440747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 41911578 - 41911613
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  41911578 gacaaggtgacacgtgtcactttgtcattggctttg 41911613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 193
Target Start/End: Complemental strand, 43705137 - 43705044
Alignment:
Q  100 aactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||| |||| |||||    
T  43705137 aactcagagccaatggcaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccgaaaccagact 43705044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 29771436 - 29771532
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac-nnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| |||  |||||||||||          |||||||||| |||| | ||||||| ||||||||||||||||    
T  29771436 aaaactcagagccaatgacaaggtgacacgtgttcaggagttaacttttttttttaaaccctaacagaaacctaacagaagggaccaaaacgagact 29771532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 12085549 - 12085509
Alignment:
Q  102 ctcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  12085549 ctcagagccaatgacaaggtgacacgtgtccaggagttaac 12085509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 28460855 - 28460899
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||    
T  28460855 aaaactcagagccaatgacaagatgacatgtgtccaggagttaac 28460899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 32072570 - 32072614
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||    
T  32072570 aaaactcagagccaatgacaaggtgacacgtgtccagaagttaac 32072614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 35918316 - 35918272
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||    
T  35918316 aaaactcagagccaatgacaacgtgacacgtgtccaggagttaac 35918272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 40852085 - 40852121
Alignment:
Q  157 ctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||| ||||||||||||||||||||||||    
T  40852085 ctaacggaaatctaacagaatggaccaaaacgagact 40852121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 44495945 - 44496040
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||| ||||||||||||||||||| ||| | |||||||||           |||||||||||||| | ||||||| ||||||||||||||||    
T  44495945 aaaactcatagccaatgacaaggtgacacgtgtctaggagttaatctttttttttaaccctaacggaaacctaacagaagggaccaaaacgagact 44496040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 36951247 - 36951153
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||| |||||| || ||| ||||||||||||         ||||| ||||||||| | ||||||| ||||||||||||||||    
T  36951247 aaaactcagagccaatgagaaggtgccacgtgtccaggagttaac-tttttttaaaaccataacggaaacctaacagaagggaccaaaacgagact 36951153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 29933709 - 29933743
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaagtactt 263  Q
    ||||||||||||||||||||||||||||| |||||    
T  29933709 agttaagggaccaaagcgatatcaattaaatactt 29933743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 32072357 - 32072323
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaagtactt 263  Q
    ||||||||||||||||||||||||||||| |||||    
T  32072357 agttaagggaccaaagcgatatcaattaaatactt 32072323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 36720992 - 36721026
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaagtactt 263  Q
    ||||||||||||||||||||||||||||| |||||    
T  36720992 agttaagggaccaaagcgatatcaattaaatactt 36721026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 20494095 - 20494187
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgaga 191  Q
    |||||||||||||||||||||||| ||| ||| |||||| |||||         ||||| |||| |||||| ||||||| ||||||||||||||    
T  20494095 aaaactcagagccaatgacaaggtaacacgtgtccaggaattaac-ctttttttaaaccttaacagaaatctaacagaagggaccaaaacgaga 20494187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 23440784 - 23440880
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac-nnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||| ||||||||||||||||||| ||| ||| ||||||||          ||| ||||||||||| | ||||||| ||||||||||||||||    
T  23440784 aaaactcaaagccaatgacaaggtgacacgtgtccaagagttaacttttttttaaaaatcctaacggaaacctaacagaagggaccaaaacgagact 23440880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 56
Target Start/End: Original strand, 28460798 - 28460827
Alignment:
Q  27 gacacgtgtcactttgtcattggctttgag 56  Q
    ||||||||||||||||||||||||||||||    
T  28460798 gacacgtgtcactttgtcattggctttgag 28460827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 29414361 - 29414402
Alignment:
Q  101 actcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||    
T  29414361 actcagagccaatgacaaggtgacacgtgtccatgagttaac 29414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 34620352 - 34620311
Alignment:
Q  152 aaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||| | ||||||| ||||||||||||||||    
T  34620352 aaaccctaacggaaacctaacagaagggaccaaaacgagact 34620311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Complemental strand, 7776516 - 7776488
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaa 257  Q
    |||||||||||||||||||||||||||||    
T  7776516 agttaagggaccaaagcgatatcaattaa 7776488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 21432753 - 21432709
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||||||| |||||||||||||||| |||  |||||||||||    
T  21432753 aaaactcagagtcaatgacaaggtgacacgtgtgcaggagttaac 21432709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Complemental strand, 23440520 - 23440492
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaa 257  Q
    |||||||||||||||||||||||||||||    
T  23440520 agttaagggaccaaagcgatatcaattaa 23440492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 27383376 - 27383344
Alignment:
Q  22 aaggtgacacgtgtcactttgtcattggctttg 54  Q
    |||||||||||||||||||||||||||| ||||    
T  27383376 aaggtgacacgtgtcactttgtcattggttttg 27383344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Complemental strand, 37374025 - 37373997
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaa 257  Q
    |||||||||||||||||||||||||||||    
T  37374025 agttaagggaccaaagcgatatcaattaa 37373997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 231063 - 230968
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  231063 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 230968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 305228 - 305323
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||||         ||||||||||||||| ||||||||| ||||||||||||||||    
T  305228 aaaactcagagtcaatgacaaggtgacacgtgtccaggagttaactttttttttaaaccctaacggaaacccaacagaagggaccaaaacgagact 305323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 305144 - 305179
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  305144 gacaaggtgacacgtgtcactttgtcattggctttg 305179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 23017054 - 23017149
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  23017054 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaactttttttttaaaccctaacggaaacctaacagaagggaccaaaacgagact 23017149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 31988705 - 31988610
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  31988705 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 31988610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 7116982 - 7117075
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgaga 191  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||    
T  7116982 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgaga 7117075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 97 - 193
Target Start/End: Original strand, 9115928 - 9116025
Alignment:
Q  97 taaaactcagagccaatgacaaggtgacaagtgcccaggagttaac-nnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||          ||||||||||||||||| ||||||| ||||||||||||||||    
T  9115928 taaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttttaaaccctaacggaaatctaacagaagggaccaaaacgagact 9116025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 9739651 - 9739746
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | |||| || ||||||||||||||||    
T  9739651 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaactttttttaaaaaccctaacggaaacctaacaaaagggaccaaaacgagact 9739746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 193
Target Start/End: Original strand, 9807150 - 9807241
Alignment:
Q  102 ctcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  9807150 ctcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 9807241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 11713436 - 11713531
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  11713436 aaaactcagagccaatgacaatgtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 11713531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 18475940 - 18476035
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  18475940 aaaactcaaagccaatgacaaggtaacaagtgtccaggagttaactttttttaaaaaccctaacggaaacctaacagaagggaccaaaacgagact 18476035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 40229282 - 40229191
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacga 189  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||    
T  40229282 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacatttttttaaaaccctaacggaaacctaacagaagggaccaaaacga 40229191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 41154809 - 41154714
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  41154809 aaaactcagagccaatgacaaggtgacacgtgtccaagagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 41154714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 37035734 - 37035829
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||         ||||||||||||||| | ||||||| | ||||||||||||||    
T  37035734 aaaactcagagccaatgacaaggtgacacgtgtccaagagttaacttttttttaaaaccctaacggaaacctaacagaaggaaccaaaacgagact 37035829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 41658811 - 41658906
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||| ||| | |||| || ||||||||||||||||    
T  41658811 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacgaaaacctaacataagggaccaaaacgagact 41658906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 43978862 - 43978767
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||| ||||||||||||||||| ||| | ||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  43978862 aaaactcagaaccaatgacaaggtgacacgtgtcaaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 43978767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 42194252 - 42194346
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         |||| |||||||||| | ||||||| ||||||||||||||||    
T  42194252 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac-ctttttttaaactctaacggaaacctaacagaagggaccaaaacgagact 42194346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 45434133 - 45434227
Alignment:
Q  99 aaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||         ||||||||||||||| | || |||| ||||||||||||||||    
T  45434133 aaactcagagccaatgacaaggtgatacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaatagaagggaccaaaacgagact 45434227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 45123482 - 45123575
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgaga 191  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||         ||||||||| ||||| | ||||||| ||||||||||||||    
T  45123482 aaaactcagagccaatgacaaggtaacacgtgtccaggagttaacttttttttaaaaccctaatggaaacctaacagaagggaccaaaacgaga 45123575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 2221831 - 2221927
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac-nnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||          ||||||||||||||| | ||||||| ||||||||| ||||||    
T  2221831 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaactttttttttaaaaccctaacggaaacctaacagaagggaccaaaatgagact 2221927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 2621248 - 2621292
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  2621248 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac 2621292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 8272178 - 8272084
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||         ||||||||| ||||| | ||||||| ||||||||||||||||    
T  8272178 aaaactcagagccaatgacaaggtgacacgtgtcca-gagttaactcttttttaaaaccctaatggaaacctaacagaagggaccaaaacgagact 8272084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 13093976 - 13094020
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  13093976 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac 13094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 14724484 - 14724579
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||| ||||||||||| ||| | ||||||||||         ||||||||||| ||| | ||||||| ||||||||||||||||    
T  14724484 aaaactcagagccaataacaaggtgacacgtgtctaggagttaacttttttttaaaaccctaacgaaaacctaacagaagggaccaaaacgagact 14724579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 31446026 - 31446121
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||  | ||||||||||         ||||||||||||||| | || |||| ||||||||||||||||    
T  31446026 aaaactcagagccaatgacaaggtgacacgtatctaggagttaacttttttttaaaaccctaacggaaacctaagagaagggaccaaaacgagact 31446121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 33098779 - 33098684
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||||||||||  ||  |||||||||||         ||||||||||||||| | ||||||  ||||||||||||||||    
T  33098779 aaaactcagagccaatgacaaggtgacacatgttcaggagttaacttttttttaaaaccctaacggaaacctaacagatgggaccaaaacgagact 33098684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 43086750 - 43086845
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||| |||| | ||| |||| |||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  43086750 aaaactcagagccaatgacaacgtgaaacgtgtccagaagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 43086845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 22013767 - 22013732
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  22013767 gacaaggtgacacgtgtcactttgtcattggctttg 22013732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 43273623 - 43273588
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  43273623 gacaaggtgacacgtgtcactttgtcattggctttg 43273588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 761852 - 761810
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagtta 140  Q
    |||||||||||||||||||||||||||| ||| ||||||||||    
T  761852 aaaactcagagccaatgacaaggtgacacgtgtccaggagtta 761810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 14724371 - 14724409
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttgaga 57  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  14724371 gacaaggtgacacatgtcactttgtcattggctttgaga 14724409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 43086669 - 43086707
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttgaga 57  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  43086669 gacaaggtgacacgtgtcaccttgtcattggctttgaga 43086707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 22013655 - 22013559
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaa-cnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||           ||||||||||||||| | ||||||| ||||||||||||||||    
T  22013655 aaaactcagagtcaatgacaaggtgacacgtgtccaggagttaattttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 22013559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 26060299 - 26060255
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||| ||||||||||||||||| ||| ||||||||||||    
T  26060299 aaaactcagaaccaatgacaaggtgacacgtgtccaggagttaac 26060255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 30864404 - 30864448
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||    
T  30864404 aaaactcagagccaatgacaatgtgacacgtgtccaggagttaac 30864448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 36032361 - 36032405
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||    
T  36032361 aaaactcagagccaatgacaagatgacacgtgtccaggagttaac 36032405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 45466167 - 45466211
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||    
T  45466167 aaaactcagagccaatgacaagatgacacgtgtccaggagttaac 45466211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 7791896 - 7791931
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    |||||||||||||||||||| |||||||||||||||    
T  7791896 gacaaggtgacacgtgtcacgttgtcattggctttg 7791931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 29091002 - 29090967
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||| ||||||||||||||||||||||    
T  29091002 gacaaggtgacacatgtcactttgtcattggctttg 29090967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 44978070 - 44978027
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaa 141  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||    
T  44978070 aaaactcagagccaatgacaaggggacatgtgtccaggagttaa 44978027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 57
Target Start/End: Complemental strand, 761921 - 761891
Alignment:
Q  27 gacacgtgtcactttgtcattggctttgaga 57  Q
    |||||||||||||||||||||||||||||||    
T  761921 gacacgtgtcactttgtcattggctttgaga 761891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 7999495 - 7999453
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagtta 140  Q
    |||||||||| ||||||||||||||||| ||| ||||||||||    
T  7999495 aaaactcagatccaatgacaaggtgacacgtgtccaggagtta 7999453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 8000021 - 7999987
Alignment:
Q  23 aggtgacacgtgtcactttgtcattggctttgaga 57  Q
    ||||||||||||||||||||||| |||||||||||    
T  8000021 aggtgacacgtgtcactttgtcaatggctttgaga 7999987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 43633455 - 43633497
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagtta 140  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||    
T  43633455 aaaactcagagccaatgacaaggtgacacgtgtccaagagtta 43633497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 45433813 - 45433779
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaagtactt 263  Q
    ||||||||||||||||||||||||||||| |||||    
T  45433813 agttaagggaccaaagcgatatcaattaaatactt 45433779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 7812638 - 7812679
Alignment:
Q  152 aaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||| | ||||||| ||||||||||||||||    
T  7812638 aaaccctaacggaaacctaacagaagggaccaaaacgagact 7812679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 11760835 - 11760876
Alignment:
Q  152 aaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||| | ||||||| ||||||||||||||||    
T  11760835 aaaccctaacggaaacctaacagaagggaccaaaacgagact 11760876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Original strand, 762170 - 762198
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaa 257  Q
    |||||||||||||||||||||||||||||    
T  762170 agttaagggaccaaagcgatatcaattaa 762198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 9807094 - 9807058
Alignment:
Q  157 ctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||| | ||||||||||||||||||||||||    
T  9807094 ctaacggaaacctaacagaatggaccaaaacgagact 9807058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 36032286 - 36032254
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggct 51  Q
    ||||||| |||||||||||||||||||||||||    
T  36032286 gacaaggcgacacgtgtcactttgtcattggct 36032254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 41154939 - 41154975
Alignment:
Q  157 ctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  41154939 ctaacggaaatctaacagaagggaccaaaacgagact 41154975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 43633256 - 43633220
Alignment:
Q  157 ctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||| | ||||||||||||||||||||||||    
T  43633256 ctaacggaaacctaacagaatggaccaaaacgagact 43633220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 43633357 - 43633389
Alignment:
Q  22 aaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||| |||||||||||||||    
T  43633357 aaggtgacacgtgtcacgttgtcattggctttg 43633389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 17383927 - 17383832
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  17383927 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 17383832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 14527191 - 14527100
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacga 189  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||    
T  14527191 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacga 14527100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 10914753 - 10914662
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacga 189  Q
    |||||||||||||||||||||||||||| ||| |||||||||||          ||||||||||||||| | ||||||| ||||||||||||    
T  10914753 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaattttttttgaaaaccctaacggaaacctaacagaagggaccaaaacga 10914662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 22498633 - 22498728
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||| |||| | ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  22498633 aaaactcagagccaatgacaatgtgatacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 22498728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 3619142 - 3619237
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||         ||||||||||| ||| | ||||||| ||| ||||||||||||    
T  3619142 aaaactcagagccaatgacaaggtgacacgtgtccatgagttaacttttttttaaaaccctaacgaaaacctaacagaagggatcaaaacgagact 3619237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 13703573 - 13703478
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||| ||||||||||||||||| |||  |||||||||||         ||||||||||||||| | ||||||| ||||||||| ||||||    
T  13703573 aaaactcagacccaatgacaaggtgacatgtgtgcaggagttaactttctttttaaaccctaacggaaacctaacagaagggaccaaaatgagact 13703478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 18683742 - 18683651
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacga 189  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| |||||| |||||    
T  18683742 aaaactcaaagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccagaacga 18683651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 21271984 - 21272079
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||||         |||||||||| |||| | ||||||| ||||||||| ||||||    
T  21271984 aaaactcaaagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacagaaacctaacagaagggaccaaaatgagact 21272079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 3619055 - 3619090
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  3619055 gacaaggtgacacgtgtcactttgtcattggctttg 3619090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 9424710 - 9424621
Alignment:
Q  97 taaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaa 186  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||||          ||||||||||||||| | ||||||| |||||||||    
T  9424710 taaaattcagagccaatgacaaggtgacacgtgtccaggagttaatttttttttaaaaccctaacggaaacctaacagaagggaccaaaa 9424621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 13839668 - 13839572
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaa-ccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| || | |||||||         ||| |||||||||||| | ||||||| ||||||||||||||||    
T  13839668 aaaactcagagccaatgacaaggtgacacgtgtcctgaagttaactttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 13839572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 714710 - 714666
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||    
T  714710 aaaactcagagccaatgacaaggtgacgcgtgtccaggagttaac 714666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 3366689 - 3366645
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||    
T  3366689 aaaactcagagccaatggcaaggtgacacgtgtccaggagttaac 3366645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 26392521 - 26392477
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||    
T  26392521 aaaactcagagccaatgacaaagtgacatgtgtccaggagttaac 26392477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 21271786 - 21271821
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  21271786 gacaaggtgacacgtgtcactttgtcattggttttg 21271821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 21271893 - 21271928
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||| ||||    
T  21271893 gacaaggtgacacgtgtcactttgtcattggttttg 21271928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 29175258 - 29175215
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaa 141  Q
    |||||||| ||||||||||||||||||| ||| |||||||||||    
T  29175258 aaaactcaaagccaatgacaaggtgacacgtgtccaggagttaa 29175215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 29175329 - 29175294
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||| ||||||||||||||||||||||    
T  29175329 gacaaggtgacacatgtcactttgtcattggctttg 29175294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 31739563 - 31739521
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagtta 140  Q
    |||||||||||||||||||||||||||| |||  |||||||||    
T  31739563 aaaactcagagccaatgacaaggtgacacgtgtacaggagtta 31739521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 21271918 - 21271881
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttgag 56  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  21271918 gacaaagtgacacgtgtcaccttgtcattggctttgag 21271881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 24100566 - 24100661
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||| ||||||||| ||||||||| ||||||||||||||||    
T  24100566 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccgtaacggaaaaccaacagaagggaccaaaacgagact 24100661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 435743 - 435651
Alignment:
Q  101 actcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  435743 actcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 435651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 7265481 - 7265576
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  7265481 aaaactcagagccaatgacaatgtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 7265576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 17340061 - 17340156
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  17340061 aaaactcagagccaatgacaaagtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 17340156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 17420941 - 17421036
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||         ||||||||||||||| | |||| || ||||||||||||||||    
T  17420941 aaaactcagagtcaatgacaaggtgacaagtgtccaggagttaactttttttttaaaccctaacggaaacctaacaaaagggaccaaaacgagact 17421036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 30112340 - 30112245
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         |||||| |||||||| | ||||||| ||||||||||||||||    
T  30112340 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaacccaaacggaaacctaacagaagggaccaaaacgagact 30112245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 16669699 - 16669604
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||| ||||||||| |||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  16669699 aaaactcagagtcaatgacaatgtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaaaggaccaaaacgagact 16669604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 257
Target Start/End: Complemental strand, 1031011 - 1030852
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagactnnnn 197  Q
    ||||||||||| ||||||||||||| || ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||| ||||||        
T  1031011 aaaactcagagtcaatgacaaggtgccacgtgtccaggagttaactttttttaaaaaccctaacggaaacctaacagaagggaccaaaatgagactaaaa 1030912  T
Q  198 nnnncttaaaatattcaaacaatcnnnnnnnagttaagggaccaaagcgatatcaattaa 257  Q
        ||||||||  |||||||||        |||||| ||||||||||||||||||||||    
T  1030911 aaaacttaaaatcctcaaacaatatttttttagttaaaggaccaaagcgatatcaattaa 1030852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 27098733 - 27098636
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac--nnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||           ||||||||||||||| | ||||||| ||||||||||||||||    
T  27098733 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 27098636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 43387357 - 43387451
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  43387357 aaaactcagagccaatgactaggtgacacgtgtccaggagttaac-ttttttttaaaccctaacggaaacctaacagaagggaccaaaacgagact 43387451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 35001108 - 35001019
Alignment:
Q  102 ctcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgaga 191  Q
    ||||||||||||||||||||| || ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||    
T  35001108 ctcagagccaatgacaaggtggcacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgaga 35001019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 5186839 - 5186743
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac-nnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||          |||| |||||||||| | |||||||||| |||||||||||||    
T  5186839 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttttaaactctaacggaaacctaacagaatgggccaaaacgagact 5186743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 26888774 - 26888682
Alignment:
Q  101 actcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | |||||||  |||||||| ||||||    
T  26888774 actcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagagaccaaaatgagact 26888682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 4959753 - 4959658
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||| |||||||||| |||  |||||||||||         ||||||||||||||| | ||||||| |||| |||||||||||    
T  4959753 aaaactcagagccaatggcaaggtgacacgtgttcaggagttaacttttttttaaaaccctaacggaaacctaacagaagggactaaaacgagact 4959658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 6157328 - 6157233
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||| ||||||||||||||  || ||||||||||||         ||||||||||||||| | ||||||  ||||||||||||||||    
T  6157328 aaaactcagagcctatgacaaggtgacacatgtccaggagttaactttttcttaaaaccctaacggaaacctaacagatgggaccaaaacgagact 6157233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 11079320 - 11079276
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  11079320 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac 11079276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 27121810 - 27121766
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  27121810 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac 27121766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 27850863 - 27850819
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  27850863 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac 27850819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 35773855 - 35773760
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| |||  ||||||||||          |||||||||||||| || |||| || ||||||||||||||||    
T  35773855 aaaactcagagccaatgacaaggtgacacgtgttcaggagttaatttttttttaaaaccctaacggaattctaacaaaagggaccaaaacgagact 35773760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 29962048 - 29962142
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||||||||||  || ||| ||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  29962048 aaaactcagagccaatgacaaggtgacacttgtccaagagttaacttttttta-aaaccctaacggaaacctaacagaagggaccaaaacgagact 29962142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 4821962 - 4822057
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||  ||| | ||||||||||         ||||||||||||||| | |||||||  || ||||||||||||    
T  4821962 aaaactcagagccaatgacaaggtgacccgtgtctaggagttaacttttttttaaaaccctaacggaaacctaacagaagagagcaaaacgagact 4822057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 25586490 - 25586446
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||    
T  25586490 aaaactcagagccaatgacaaggtgacacgtgtccaggaattaac 25586446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 4821867 - 4821902
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    |||||||||||| |||||||||||||||||||||||    
T  4821867 gacaaggtgacaagtgtcactttgtcattggctttg 4821902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 16669798 - 16669763
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||| ||||||||||||||||||||||    
T  16669798 gacaaggtgacacttgtcactttgtcattggctttg 16669763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 20243645 - 20243611
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggcttt 53  Q
    ||||||||||||||||||||||||||| |||||||    
T  20243645 gacaaggtgacacgtgtcactttgtcaatggcttt 20243611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 30012697 - 30012656
Alignment:
Q  152 aaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||| | ||||||| ||||||||||||||||    
T  30012697 aaaccctaacggaaacctaacagaagggaccaaaacgagact 30012656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 38312486 - 38312527
Alignment:
Q  152 aaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||| | ||||||| ||||||||||||||||    
T  38312486 aaaccctaacggaaacctaacagaagggaccaaaacgagact 38312527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 4077091 - 4077051
Alignment:
Q  153 aaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||| | ||||||| ||||||||||||||||    
T  4077091 aaccctaacggaaacctaacagaagggaccaaaacgagact 4077051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 5595589 - 5595557
Alignment:
Q  22 aaggtgacacgtgtcactttgtcattggctttg 54  Q
    |||||||||||||||| ||||||||||||||||    
T  5595589 aaggtgacacgtgtcattttgtcattggctttg 5595557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 7265381 - 7265345
Alignment:
Q  157 ctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  7265381 ctaacggaaatctaacagaagggaccaaaacgagact 7265345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Original strand, 26888934 - 26888962
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaa 257  Q
    |||||||||||||||||||||||||||||    
T  26888934 agttaagggaccaaagcgatatcaattaa 26888962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 35774107 - 35774143
Alignment:
Q  157 ctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  35774107 ctaacggaaatctaacagaagggaccaaaacgagact 35774143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 17475749 - 17475844
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  17475749 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 17475844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 28504939 - 28505034
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  28504939 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 28505034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 263
Target Start/End: Original strand, 14947556 - 14947720
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagactnnnn 197  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||        
T  14947556 aaaactcagagccaatgacaaggtgacacgtatccaggagttaac-ttttttttaaaccctaacggaaacctaacagaagggaccaaaacgagactaaaa 14947654  T
Q  198 nnnncttaaaatattcaaacaatcnnnnnnnagttaagggaccaaagcgatatcaattaagtactt 263  Q
        |||||  |||||||||||||       ||||||| ||||||||||||| ||||||| |||||    
T  14947655 aaaacttaatttattcaaacaatctttttttagttaagagaccaaagcgataccaattaaatactt 14947720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 25618959 - 25619054
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         |||||||||| |||| | ||||||| ||||||||||||||||    
T  25618959 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacagaaacctaacagaagggaccaaaacgagact 25619054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 31488340 - 31488435
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||| ||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  31488340 aaaactcagagccaatgagaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 31488435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 34237673 - 34237578
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  34237673 aaaaatcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 34237578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 46307904 - 46307999
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| |||  |||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  46307904 aaaactcagagccaatgacaaggtgacacgtgttcaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 46307999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 48453824 - 48453729
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||| ||||||||| | ||||||| ||||||||||||||||    
T  48453824 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacatttttttaaaaccttaacggaaacctaacagaagggaccaaaacgagact 48453729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 5904756 - 5904850
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         |||||||||| |||||| ||||||| ||||||||||||||||    
T  5904756 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac-tttttttaaaaccctaacagaaatctaacagaagggaccaaaacgagact 5904850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 17259337 - 17259432
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||| ||||||||||||||||| ||| ||||||||||||         ||||||| ||||||| | ||||||| ||||||||||||||||    
T  17259337 aaaactcagatccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaacccttacggaaacctaacagaagggaccaaaacgagact 17259432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 37208706 - 37208800
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  37208706 aaaactcagagccaatgacaaggtgacacgtgtccagaagttaac-ttttattaaaaccctaacggaaacctaacagaagggaccaaaacgagact 37208800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 54037713 - 54037802
Alignment:
Q  104 cagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||| |||||||||||||||||  |||||||||||||||         ||||||||||||||||| ||||||| ||| ||||||||||||    
T  54037713 cagaaccaatgacaaggtgacacatgcccaggagttaacttttattttaaaccctaacggaaatcaaacagaagggatcaaaacgagact 54037802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 56270737 - 56270641
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac-nnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||| ||||||||||||||||| ||| ||||||||||||          ||||||||||||||| | ||||||| ||||||||||||||||    
T  56270737 aaaactcagaaccaatgacaaggtgacacgtgtccaggagttaactgtttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 56270641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 1098262 - 1098357
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||||         ||||||||||||||| | ||||||| ||||||||| ||||||    
T  1098262 aaaactcagagccaatggcaaggtgacacgtgtccagaagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaatgagact 1098357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 193
Target Start/End: Complemental strand, 14525640 - 14525549
Alignment:
Q  102 ctcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||| ||| ||||||| ||||         ||||| ||||||||| | ||||||| ||||||||||||||||    
T  14525640 ctcagagccaatgacaaggtgacacgtgtccaggaggtaactttttttttaaaccataacggaaacctaacagaagggaccaaaacgagact 14525549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 22307630 - 22307535
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| |||  ||||||||||          |||||||||| |||| | ||||||| ||||||||||||||||    
T  22307630 aaaactcagagccaatgacaaggtgacacgtgttcaggagttaaattttttttaaaaccctaacagaaacctaacagaagggaccaaaacgagact 22307535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 42369375 - 42369470
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||||         ||||||||||||||| | ||||||| ||||||||| ||||||    
T  42369375 aaaactcagagccaatggcaaggtgacatgtgtccagaagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaatgagact 42369470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 48091685 - 48091594
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacga 189  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||||         ||||| ||||||||| | ||||||| ||||||||||||    
T  48091685 aaaactcagagtcaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccttaacggaaacctaacagaagggaccaaaacga 48091594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 22309249 - 22309214
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  22309249 gacaaggtgacacgtgtcactttgtcattggctttg 22309214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 24045638 - 24045603
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  24045638 gacaaggtgacacgtgtcactttgtcattggctttg 24045603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 53652758 - 53652672
Alignment:
Q  107 agccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||| ||| |||||||||||          ||||||||||||||| | ||||||| ||||||||||||||||    
T  53652758 agccaatgacaaggtgacacgtgtccaggagttaattttttttttaaaccctaacggaaacctaacagaagggaccaaaacgagact 53652672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 46579932 - 46579890
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagtta 140  Q
    |||||||||||||||||||||||||||| ||| ||||||||||    
T  46579932 aaaactcagagccaatgacaaggtgacacgtgtccaggagtta 46579890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 193
Target Start/End: Complemental strand, 20614298 - 20614210
Alignment:
Q  104 cagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||| ||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  20614298 cagagccaataacaaggtgacacgtgtccaggagttaacttttttta-aaaccctaacggaaacctaacagaagggaccaaaacgagact 20614210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 24045558 - 24045462
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac-nnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||| ||||||||||||||| ||| |||||||||| |          ||||||||||||||| | ||||||| ||||||||||||||||    
T  24045558 aaaactcagagctaatgacaaggtgacacgtgtccaggagttagctttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 24045462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 39321367 - 39321411
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||||||||||||||||||||||||  || ||||||||||||    
T  39321367 aaaactcagagccaatgacaaggtgacacctgtccaggagttaac 39321411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 44303856 - 44303900
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||    
T  44303856 aaaactcggagccaatgacaaggtgacacgtgtccaggagttaac 44303900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 5696237 - 5696202
Alignment:
Q  22 aaggtgacacgtgtcactttgtcattggctttgaga 57  Q
    |||||||||||||||||||||| |||||||||||||    
T  5696237 aaggtgacacgtgtcactttgttattggctttgaga 5696202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 142
Target Start/End: Complemental strand, 44795867 - 44795828
Alignment:
Q  103 tcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  44795867 tcagagccaatgacaaggtgacacgtgtccaggagttaac 44795828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 50
Target Start/End: Original strand, 44795938 - 44795969
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggc 50  Q
    ||||||||||||||||||||||||||||||||    
T  44795938 gacaaggtgacacgtgtcactttgtcattggc 44795969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 57
Target Start/End: Original strand, 37208610 - 37208640
Alignment:
Q  27 gacacgtgtcactttgtcattggctttgaga 57  Q
    |||||||||||||||||||||||||||||||    
T  37208610 gacacgtgtcactttgtcattggctttgaga 37208640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 57
Target Start/End: Original strand, 44303783 - 44303813
Alignment:
Q  27 gacacgtgtcactttgtcattggctttgaga 57  Q
    |||||||||||||||||||||||||||||||    
T  44303783 gacacgtgtcactttgtcattggctttgaga 44303813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 48091763 - 48091725
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttgaga 57  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  48091763 gacaaggtgaaacgtgtcaccttgtcattggctttgaga 48091725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 57
Target Start/End: Complemental strand, 56270825 - 56270795
Alignment:
Q  27 gacacgtgtcactttgtcattggctttgaga 57  Q
    |||||||||||||||||||||||||||||||    
T  56270825 gacacgtgtcactttgtcattggctttgaga 56270795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 57
Target Start/End: Complemental strand, 56270955 - 56270925
Alignment:
Q  27 gacacgtgtcactttgtcattggctttgaga 57  Q
    |||||||||||||||||||||||||||||||    
T  56270955 gacacgtgtcactttgtcattggctttgaga 56270925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 46058888 - 46058847
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagtt 139  Q
    |||||||||||||||||||||||||||| ||| ||| |||||    
T  46058888 aaaactcagagccaatgacaaggtgacacgtgtccatgagtt 46058847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 4767100 - 4767068
Alignment:
Q  22 aaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||| |||||||||||||||||||||||    
T  4767100 aaggtgacatgtgtcactttgtcattggctttg 4767068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 5696670 - 5696626
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| | |||| |||||    
T  5696670 aaaactcagagccaatgacaaggtgacacgtgtctaggaattaac 5696626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Original strand, 9181947 - 9181975
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaa 257  Q
    |||||||||||||||||||||||||||||    
T  9181947 agttaagggaccaaagcgatatcaattaa 9181975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 26673005 - 26673045
Alignment:
Q  102 ctcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||| ||| ||| ||||||||||||    
T  26673005 ctcagagccaatgacaaggtaacacgtgtccaggagttaac 26673045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Original strand, 26673122 - 26673150
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaa 257  Q
    |||||||||||||||||||||||||||||    
T  26673122 agttaagggaccaaagcgatatcaattaa 26673150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Original strand, 28505072 - 28505100
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaa 257  Q
    |||||||||||||||||||||||||||||    
T  28505072 agttaagggaccaaagcgatatcaattaa 28505100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Original strand, 41845871 - 41845899
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaa 257  Q
    |||||||||||||||||||||||||||||    
T  41845871 agttaagggaccaaagcgatatcaattaa 41845899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 48091900 - 48091936
Alignment:
Q  157 ctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||| | ||||||||||||||||||||||||    
T  48091900 ctaacggaaacctaacagaatggaccaaaacgagact 48091936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Complemental strand, 52574734 - 52574706
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaa 257  Q
    |||||||||||||||||||||||||||||    
T  52574734 agttaagggaccaaagcgatatcaattaa 52574706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 52575049 - 52575093
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||| ||||||||||||||||||||| |||  |||||||||||    
T  52575049 aaaacttagagccaatgacaaggtgacatgtgtacaggagttaac 52575093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 876755 - 876850
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  876755 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 876850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 24242640 - 24242545
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| |||||||||| |||||    
T  24242640 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacaagact 24242545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 36174853 - 36174948
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||| ||| | ||||||| ||||||||||||||||    
T  36174853 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacgaaaacctaacagaagggaccaaaacgagact 36174948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 47872940 - 47873035
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||| ||||||||| | ||||||| ||||||||||||||||    
T  47872940 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacatttttttaaaaccataacggaaacctaacagaagggaccaaaacgagact 47873035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 53246468 - 53246563
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||| ||| | ||||||| ||||||||||||||||    
T  53246468 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacgtaaacctaacagaagggaccaaaacgagact 53246563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 12740155 - 12740060
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||| ||||||||||| ||| ||| ||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  12740155 aaaactcagagccaattacaaggtgacacgtgtccaagagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 12740060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 13355367 - 13355272
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | |  |||| ||||||||||||||||    
T  13355367 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctactagaagggaccaaaacgagact 13355272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 32309470 - 32309565
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||| ||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||| ||||||    
T  32309470 aaaacttagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaatgagact 32309565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 41263409 - 41263504
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  41263409 aaaactcagagccaatggcaaggtgacacgtgtccagaagttaacttttttttaaaaccctaacggaaacctaacagaaaggaccaaaacgagact 41263504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 50530807 - 50530714
Alignment:
Q  99 aaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||         ||||| ||||||||| | |||| |||||||||||||||||||    
T  50530807 aaactcagagccaatgacaaggtgacatgtgtccaggagttaac-atttttttaaaccttaacggaaacctaacataatggaccaaaacgagact 50530714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 9242425 - 9242520
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||         ||| ||||||||||| | ||| ||| ||||||||||||||||    
T  9242425 aaaactcagagctaatgacaaggtgacacgtgtccaggagttaactttttttctaaatcctaacggaaacctaactgaagggaccaaaacgagact 9242520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 29191472 - 29191378
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| |||||||||||          ||||||||||||||| | ||||| | ||||||||||||||||    
T  29191472 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaa-ttttttttaaaaccctaacggaaacctaacaggagggaccaaaacgagact 29191378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 45940403 - 45940359
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  45940403 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac 45940359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 8100813 - 8100848
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  8100813 gacaaggtgacacgtgtcactttgtcattggctttg 8100848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 29191564 - 29191529
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  29191564 gacaaggtgacacgtgtcactttgtcattggctttg 29191529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 51675900 - 51675865
Alignment:
Q  22 aaggtgacacgtgtcactttgtcattggctttgaga 57  Q
    ||||||||||||||||||||||||||||||||||||    
T  51675900 aaggtgacacgtgtcactttgtcattggctttgaga 51675865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 39198800 - 39198842
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagtta 140  Q
    |||||||||||||||||||||||||||| ||| ||||||||||    
T  39198800 aaaactcagagccaatgacaaggtgacacgtgtccaggagtta 39198842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 193
Target Start/End: Complemental strand, 51675803 - 51675715
Alignment:
Q  104 cagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||| ||| |||||||||||          ||||||||||||||| | ||||||| ||||||||||||||||    
T  51675803 cagagccaatgacaaggtgacacgtgtccaggagttaatttttttttaaaaccctaacggaaacctaacagaa-ggaccaaaacgagact 51675715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 967169 - 967077
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgaga 191  Q
    |||| ||||||||||||||||||||||| ||| | ||||||||||         ||||||||||||||| | ||||||| ||||||||||||||    
T  967169 aaaaatcagagccaatgacaaggtgacacgtgtctaggagttaac-tttttttaaaaccctaacggaaacctaacagaagggaccaaaacgaga 967077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 44711939 - 44712027
Alignment:
Q  105 agagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | || |||| ||||||||| ||||||    
T  44711939 agagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaatagaagggaccaaaatgagact 44712027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 15986899 - 15986931
Alignment:
Q  22 aaggtgacacgtgtcactttgtcattggctttg 54  Q
    |||||||||||||||||||||||||||||||||    
T  15986899 aaggtgacacgtgtcactttgtcattggctttg 15986931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 27990136 - 27990180
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| | ||||||||||    
T  27990136 aaaactcagagccaatgacaaggtgacacgtgtctaggagttaac 27990180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 28919279 - 28919239
Alignment:
Q  102 ctcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  28919279 ctcagagccaatgacaaggtgacacgtgtccaggagttaac 28919239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 28919362 - 28919330
Alignment:
Q  22 aaggtgacacgtgtcactttgtcattggctttg 54  Q
    |||||||||||||||||||||||||||||||||    
T  28919362 aaggtgacacgtgtcactttgtcattggctttg 28919330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 40503598 - 40503693
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||| || ||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | || | || ||||||||||||||||    
T  40503598 aaaactctgaaccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaaaaaaagggaccaaaacgagact 40503693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 50530966 - 50531010
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||    
T  50530966 aaaactcagagccaatgacaatgtgacacgtgtccaggagttaac 50531010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 32309390 - 32309425
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    |||||||||||||||||||||| |||||||||||||    
T  32309390 gacaaggtgacacgtgtcacttagtcattggctttg 32309425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 46370587 - 46370630
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaa 141  Q
    |||||||||||||||||||||||||||| |||  ||||||||||    
T  46370587 aaaactcagagccaatgacaaggtgacacgtgttcaggagttaa 46370630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 48946553 - 48946647
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||| |||||| || ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||| ||||||    
T  48946553 aaaactcagagccaatgagaaggtgccacgtgtccaggagttaac-tttttttaaaaccctaacggaaacctaacagaagggaccaaaatgagact 48946647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 49
Target Start/End: Complemental strand, 45940501 - 45940471
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattgg 49  Q
    |||||||||||||||||||||||||||||||    
T  45940501 gacaaggtgacacgtgtcactttgtcattgg 45940471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 2814635 - 2814598
Alignment:
Q  156 cctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  2814635 cctaacggaaatctaacagaagggaccaaaacgagact 2814598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Complemental strand, 48946236 - 48946208
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaa 257  Q
    |||||||||||||||||||||||||||||    
T  48946236 agttaagggaccaaagcgatatcaattaa 48946208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 7334635 - 7334540
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  7334635 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 7334540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 8678325 - 8678232
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgaga 191  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||||| ||||||| |||| |||||||||    
T  8678325 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaatctaacagaagggactaaaacgaga 8678232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 14244358 - 14244263
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||         |||| |||||||||| | ||||||||||||||||||||||||    
T  14244358 aaaactcagagccaatgacaaggtgacacgtatccaggagttaacttttttttaaaactctaacggaaacctaacagaatggaccaaaacgagact 14244263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 24370307 - 24370212
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  24370307 aaaactcagagccaatgacaaggagacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 24370212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 33145588 - 33145493
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  33145588 aaaactcagagccaatgacaaggtgacacgtgtccagaagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 33145493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 37483408 - 37483503
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| |||||||||||          ||||||||||||||| | ||||||| ||||||||||||||||    
T  37483408 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaatttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 37483503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 37708383 - 37708288
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| |||||||||||          ||||||||||||||| | ||||||| ||||||||||||||||    
T  37708383 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaatttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 37708288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 45678904 - 45678809
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| |||||||||| |||||    
T  45678904 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacaagact 45678809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 46448607 - 46448702
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| |||  |||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  46448607 aaaactcagagccaatgacaaggtgacacgtgttcaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 46448702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 38979863 - 38979771
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgag 190  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| |||||||||||||    
T  38979863 aaaactcagagccaatggcaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgag 38979771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 3798516 - 3798421
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||| |||||||||||||||||||| ||| | ||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  3798516 aaaactcggagccaatgacaaggtgacacgtgtcaaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 3798421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 35968484 - 35968390
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| |||||||||||          ||||||||||||||| | ||||||| ||||||||||||||||    
T  35968484 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaattttttttttaaaccctaacggaaa-ctaacagaagggaccaaaacgagact 35968390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 192
Target Start/End: Complemental strand, 36985603 - 36985512
Alignment:
Q  102 ctcagagccaatgacaaggtgacaagtgcccaggagttaac-nnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagac 192  Q
    |||||||||||||||||||||||||||| ||||||||||||          ||||||||||||||| | ||||||| |||||||||||||||    
T  36985603 ctcagagccaatgacaaggtgacaagtgtccaggagttaacttttttttttaaaccctaacggaaacctaacagaaaggaccaaaacgagac 36985512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 49548473 - 49548568
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||| ||||| ||||||    
T  49548473 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaacaaaatgagact 49548568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 50227706 - 50227612
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| | ||||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  50227706 aaaactcagagccaatgacaaggtgacacgtgtctaggagttaac-tttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 50227612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 44114289 - 44114251
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttgaga 57  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44114289 gacaaggtgacacgtgtcactttgtcattggctttgaga 44114251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 35122455 - 35122359
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaa-cnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||| |         ||||||||||||||| | ||||||| ||||||||||||||||    
T  35122455 aaaactcagggccaatgacaaggtgacacgtgtccaggagttaaccttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 35122359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 35968683 - 35968775
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgaga 191  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         |||| |||||||||| | ||||||| ||||||||||||||    
T  35968683 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac-ttttttttaaactctaacggaaacctaacagaaaggaccaaaacgaga 35968775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 41723016 - 41723057
Alignment:
Q  152 aaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  41723016 aaaccctaacggaaatctaacagaatggaccaaaacgagact 41723057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 7121685 - 7121780
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||| ||||||||| ||| |||||| |||||         ||||||||||||||| | ||||||| ||||||||| ||||||    
T  7121685 aaaactcagagccaatgataaggtgacacgtgtccaggacttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaatgagact 7121780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 20258100 - 20258009
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacga 189  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||         ||||||||||||||| | |||| || ||||||||||||    
T  20258100 aaaactcagagccaatgacaaggtgacacgtgtccagaagttaactttttttaaaaaccctaacggaaacctaacaaaagggaccaaaacga 20258009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 31488279 - 31488323
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  31488279 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac 31488323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 32320153 - 32320197
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  32320153 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac 32320197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 34023440 - 34023535
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||         ||| ||||||||||| | ||||||| ||| ||||||||||||    
T  34023440 aaaactcagagccaatgacaaggtgacacgtgtccagaagttaacttttttttaaaaacctaacggaaacctaacagaagggatcaaaacgagact 34023535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 7334732 - 7334697
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  7334732 gacaaggtgacacgtgtcactttgtcattggctttg 7334697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 48984074 - 48984039
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  48984074 gacaaggtgacacgtgtcactttgtcattggctttg 48984039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 49148617 - 49148658
Alignment:
Q  152 aaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  49148617 aaaccctaacggaaatctaacagaagggaccaaaacgagact 49148658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 6137595 - 6137690
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||| ||||||||| ||| | ||||||||||         ||||||||||||||| | ||||||| ||| ||||| ||||||    
T  6137595 aaaactcagagccaatgataaggtgacacgtgtctaggagttaacttttttttaaaaccctaacggaaacctaacagaagggatcaaaatgagact 6137690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 6714580 - 6714624
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||    
T  6714580 aaaactcagagccaatgacaaagtgacatgtgtccaggagttaac 6714624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 32193804 - 32193772
Alignment:
Q  22 aaggtgacacgtgtcactttgtcattggctttg 54  Q
    |||||||||||||||||||||||||||||||||    
T  32193804 aaggtgacacgtgtcactttgtcattggctttg 32193772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 33171627 - 33171595
Alignment:
Q  22 aaggtgacacgtgtcactttgtcattggctttg 54  Q
    |||||||||||||||||||||||||||||||||    
T  33171627 aaggtgacacgtgtcactttgtcattggctttg 33171595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 39851366 - 39851322
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||    
T  39851366 aaaactcagagccaatgacaaggtgacacgtgtccatgagttaac 39851322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 45678564 - 45678520
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| | ||||||||||    
T  45678564 aaaactcagagccaatgacaaggtgacacgtgtctaggagttaac 45678520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 48983971 - 48983927
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||||    
T  48983971 aaaactcacagccaatgacaaggtgacacgtgtccaggagttaac 48983927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 48984172 - 48984216
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||    
T  48984172 aaaactcagagccaatgacaaagtgacacgtgtccaggagttaac 48984216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 50138736 - 50138831
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||| ||||||||| |||||||||  ||| |||||||||| |         ||||||||||||||| | ||||||| ||||||||||||||||    
T  50138736 aaaactcggagccaatggcaaggtgacgcgtgtccaggagttagcttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 50138831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 52179050 - 52179006
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| |||  |||||||||||    
T  52179050 aaaactcagagccaatgacaaggtgacacgtgtgcaggagttaac 52179006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 6714474 - 6714509
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    |||||||||||||||||||| |||||||||||||||    
T  6714474 gacaaggtgacacgtgtcacgttgtcattggctttg 6714509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 7049276 - 7049237
Alignment:
Q  102 ctcagagccaatgacaaggtgacaagtgcccaggagttaa 141  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  7049276 ctcagagccaatgacaaggtgacacgtgtccaggagttaa 7049237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 50
Target Start/End: Original strand, 49548377 - 49548408
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggc 50  Q
    ||||||||||||||||||||||||||||||||    
T  49548377 gacaaggtgacacgtgtcactttgtcattggc 49548408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 57
Target Start/End: Original strand, 38902624 - 38902654
Alignment:
Q  27 gacacgtgtcactttgtcattggctttgaga 57  Q
    |||||||||||||||||||||||||||||||    
T  38902624 gacacgtgtcactttgtcattggctttgaga 38902654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 6328136 - 6328040
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac-nnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||||||||||  || | ||||||||||          ||||||||||||||| | ||||||| |||||||||| |||||    
T  6328136 aaaactcagagccaatgacaaggtgacacatgtctaggagttaacttttttttttaaaccctaacggaaacctaacagaagggaccaaaacaagact 6328040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 27526965 - 27526928
Alignment:
Q  156 cctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  27526965 cctaacggaaacctaacagaatggaccaaaacgagact 27526928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 32193712 - 32193616
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac-nnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||||||||||||||  || |||| |||||||          ||| ||||||||||| | ||||||| ||||||||||||||||    
T  32193712 aaaactcagagccaatgacaaggtgacacatgtccagaagttaactttttttttaaaaacctaacggaaacctaacagaagggaccaaaacgagact 32193616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 36213925 - 36213884
Alignment:
Q  152 aaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||| | |||| |||||||||||||||||||    
T  36213925 aaaccctaacggaaacctaacataatggaccaaaacgagact 36213884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 139
Target Start/End: Original strand, 36967128 - 36967169
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagtt 139  Q
    |||||||||||||||||||||||||||| ||| ||| |||||    
T  36967128 aaaactcagagccaatgacaaggtgacacgtgtccatgagtt 36967169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 48497924 - 48497887
Alignment:
Q  156 cctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  48497924 cctaacggaaatctaacagaagggaccaaaacgagact 48497887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 1039941 - 1039973
Alignment:
Q  22 aaggtgacacgtgtcactttgtcattggctttg 54  Q
    |||||||||||||||||||||| ||||||||||    
T  1039941 aaggtgacacgtgtcactttgtaattggctttg 1039973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 1046847 - 1046879
Alignment:
Q  22 aaggtgacacgtgtcactttgtcattggctttg 54  Q
    |||||||||||||||||||||| ||||||||||    
T  1046847 aaggtgacacgtgtcactttgtaattggctttg 1046879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 3798636 - 3798672
Alignment:
Q  157 ctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  3798636 ctaacggaaatctaacagaagggaccaaaacgagact 3798672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Complemental strand, 14244225 - 14244197
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaa 257  Q
    |||||||||||||||||||||||||||||    
T  14244225 agttaagggaccaaagcgatatcaattaa 14244197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 32193863 - 32193899
Alignment:
Q  97 taaaactcagagccaatgacaaggtgacaagtgccca 133  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  32193863 taaaactcagagccaatgataaggtgacacgtgccca 32193899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 42616968 - 42616936
Alignment:
Q  22 aaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||| |||||    
T  42616968 aaggtgacacgtgtcactttgtcattgcctttg 42616936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 50227838 - 50227874
Alignment:
Q  157 ctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  50227838 ctaacggaaatctaacagaagggaccaaaacgagact 50227874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 57213 - 57118
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         ||||||||||||||| | |||||||  |||||||||||||||    
T  57213 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagagaccaaaacgagact 57118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 17976905 - 17976810
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||| |||||||||| ||| ||||||||||||         |||||||||||||||   ||||||||||||||||||||||||    
T  17976905 aaaactcagagccaatggcaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacttaacagaatggaccaaaacgagact 17976810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 36313552 - 36313647
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  36313552 aaaactcagagccaatgacaaggtgacacgtgtccagaagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 36313647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 2970683 - 2970778
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||| ||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| |||||||||| |||||    
T  2970683 aaaactcagagccaataacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaaccagact 2970778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 13479276 - 13479181
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||| ||||||||||||||||||||| ||| |||||||||||          |||  |||||||||||| ||||||||||||||||||||||||    
T  13479276 aaaacttagagccaatgacaaggtgacatgtgtccaggagttaatttttttttaaaattctaacggaaatctaacagaatggaccaaaacgagact 13479181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 25334476 - 25334571
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||         ||||| ||||||||| | ||||||| ||||||||||||||||    
T  25334476 aaaactcagagccaatgacaaggtgacacgtgtccaagagttaacttttttttaaaaccataacggaaacctaacagaagggaccaaaacgagact 25334571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 26424494 - 26424399
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||||         ||||||||||||||| | ||||||| ||||||||| ||||||    
T  26424494 aaaactcagagtcaatgacaaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaacagaagggaccaaaatgagact 26424399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 33200219 - 33200124
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||         ||||||||||||||| | |||| || ||||||||||||||||    
T  33200219 aaaactcagagccaatgacaaggtgacacgtgtccaagagttaacttttttttaaaaccctaacggaaacctaacataagggaccaaaacgagact 33200124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 39109297 - 39109259
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttgaga 57  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39109297 gacaaggtgacacgtgtcactttgtcattggctttgaga 39109259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 5381883 - 5381979
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaac-ggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         |||||||||| ||||| | |||||||  |||||||||||||||    
T  5381883 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaacctttttttaaaaccctaacgggaaacctaacagaagagaccaaaacgagact 5381979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 193
Target Start/End: Complemental strand, 38807032 - 38806940
Alignment:
Q  102 ctcagagccaatgacaaggtgacaagtgcccaggagttaac-nnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||| ||| ||||||||||||          ||||||||||||||| | ||||||| ||||||||||||||||    
T  38807032 ctcagagccaatgacaaggtgacacgtgtccaggagttaactttttttttaaaaccctaacggaaacctaacagaagggaccaaaacgagact 38806940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 677575 - 677480
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||         |||| ||||||||||   ||||||| ||||||||||||||||    
T  677575 aaaactcagagccaatgacaaggtgacacgtatccaggagttaactttttttaaaaactctaacggaaacttaacagaaaggaccaaaacgagact 677480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 39107625 - 39107720
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||| |||||||||||| |||||||| ||| ||||||||||||         ||||||||||||||| | ||| ||| ||||||||||||||||    
T  39107625 aaaactaagagccaatgactaggtgacacgtgtccaggagttaacttttttttaaaaccctaacggaaacctaactgaagggaccaaaacgagact 39107720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 43820194 - 43820289
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| | ||||||||||         |||| |||||||||| | |||| || ||||||||||||||||    
T  43820194 aaaactcagagccaatgacaaggtgacacgtgtctaggagttaacttttttttaaaactctaacggaaacctaacaaaagggaccaaaacgagact 43820289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 7674313 - 7674278
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  7674313 gacaaggtgacacgtgtcactttgtcattggctttg 7674278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 11713864 - 11713958
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||| ||||||||| ||| || |||||||||         ||||||||||||||| | ||||||| ||||||||||||||||    
T  11713864 aaaactcagagccaatgataaggtgacacgtgtcctggagttaacttttttta-aaaccctaacggaaacctaacagaagggaccaaaacgagact 11713958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 21532785 - 21532820
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  21532785 gacaaggtgacacgtgtcactttgtcattggctttg 21532820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 24181683 - 24181589
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||         ||||||||||||||| | ||||||| |||| |||||||||||    
T  24181683 aaaactcagagccaatgacaaggtgacacgtgtccaagagttaac-tttttattaaaccctaacggaaacctaacagaaaggactaaaacgagact 24181589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 3202934 - 3202900
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggcttt 53  Q
    |||||||||||||||||||||||||||||||||||    
T  3202934 gacaaggtgacacgtgtcactttgtcattggcttt 3202900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 21532892 - 21532985
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgaga 191  Q
    |||||||||||||||||| | ||||||| ||| ||||||||||||         ||||||||||| ||| | ||||||| ||||||||||||||    
T  21532892 aaaactcagagccaatgatatggtgacacgtgtccaggagttaacttttttttaaaaccctaacgaaaacctaacagaagggaccaaaacgaga 21532985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 191
Target Start/End: Complemental strand, 38536456 - 38536363
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgaga 191  Q
    ||||||||||| |||||||||||||||| ||| ||||| ||||||         |||| |||||||||| | ||||||| ||||||||||||||    
T  38536456 aaaactcagagtcaatgacaaggtgacacgtgtccaggtgttaacttttttttaaaactctaacggaaacctaacagaagggaccaaaacgaga 38536363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 40537270 - 40537232
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttgaga 57  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  40537270 gacaaggtgacacgtgtcactttgtcattcgctttgaga 40537232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 25479139 - 25479235
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac-nnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||| ||||||||||||||||| ||| ||||||||||||          |||| ||||||||||   ||||||||||||||||||||||||    
T  25479139 aaaactcagatccaatgacaaggtgacacgtgtccaggagttaactttttttttaaaactctaacggaaacgtaacagaatggaccaaaacgagact 25479235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 25486745 - 25486841
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac-nnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||| ||||||||||||||||| ||| ||||||||||||          |||| ||||||||||   ||||||||||||||||||||||||    
T  25486745 aaaactcagatccaatgacaaggtgacacgtgtccaggagttaactttttttttaaaactctaacggaaacgtaacagaatggaccaaaacgagact 25486841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 15136742 - 15136837
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||          |||||||||| |||| | ||||||| ||||||||| ||||||    
T  15136742 aaaactcagagccaatggcaaggtgacacgtgtccaggagttaatttttttttaaaaccctaacagaaacctaacagaagggaccaaaatgagact 15136837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 20237445 - 20237477
Alignment:
Q  22 aaggtgacacgtgtcactttgtcattggctttg 54  Q
    |||||||||||||||||||||||||||||||||    
T  20237445 aaggtgacacgtgtcactttgtcattggctttg 20237477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 32194706 - 32194750
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||| ||||||||||| ||| ||||||||||||    
T  32194706 aaaactcagagccaattacaaggtgacacgtgtccaggagttaac 32194750  T

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Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 2804786 - 2804821
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||| ||||||||||||||||||||||||||||||    
T  2804786 gacaatgtgacacgtgtcactttgtcattggctttg 2804821  T

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Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 2970605 - 2970640
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||| ||||||||||||||||||||||    
T  2970605 gacaaggtgacacatgtcactttgtcattggctttg 2970640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 3202857 - 3202814
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaa 141  Q
    |||||||||||||||||||||||||||| ||| ||| |||||||    
T  3202857 aaaactcagagccaatgacaaggtgacacgtgtccatgagttaa 3202814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 5381805 - 5381840
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||| ||||||||||||||||||||||    
T  5381805 gacaaggtgacacttgtcactttgtcattggctttg 5381840  T

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Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 31557421 - 31557514
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagac 192  Q
    |||||||||||||||||| ||||||||| ||| ||||| ||||||         ||||||||||| ||| | ||||||| |||||||||||||||    
T  31557421 aaaactcagagccaatgataaggtgacacgtgtccaggggttaacttttttttaaaaccctaacgaaaacctaacagaa-ggaccaaaacgagac 31557514  T

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Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 35668725 - 35668760
Alignment:
Q  22 aaggtgacacgtgtcactttgtcattggctttgaga 57  Q
    |||||||||||||||||||||||||||||| |||||    
T  35668725 aaggtgacacgtgtcactttgtcattggctatgaga 35668760  T

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Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 54
Target Start/End: Complemental strand, 12966056 - 12966026
Alignment:
Q  24 ggtgacacgtgtcactttgtcattggctttg 54  Q
    |||||||||||||||||||||||||||||||    
T  12966056 ggtgacacgtgtcactttgtcattggctttg 12966026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 14287890 - 14287856
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaagtactt 263  Q
    ||||||||||||||||||||||||||||| |||||    
T  14287890 agttaagggaccaaagcgatatcaattaaatactt 14287856  T

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Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 12965923 - 12965882
Alignment:
Q  152 aaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||||||||||| | ||||||| ||||||||||||||||    
T  12965923 aaaccctaacggaaacctaacagaagggaccaaaacgagact 12965882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 14288244 - 14288281
Alignment:
Q  156 cctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  14288244 cctaacgaaaatctaacagaatggaccaaaacgagact 14288281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 2804899 - 2804939
Alignment:
Q  153 aaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||| ||||| ||||||| ||||||||||||||||    
T  2804899 aaccctaacgaaaatctaacagaagggaccaaaacgagact 2804939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 2822489 - 2822445
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||||    
T  2822489 aaaactcagagccaatggcaaggtgacacgtgtccagaagttaac 2822445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Original strand, 11713996 - 11714024
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaa 257  Q
    |||||||||||||||||||||||||||||    
T  11713996 agttaagggaccaaagcgatatcaattaa 11714024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 14847988 - 14847956
Alignment:
Q  22 aaggtgacacgtgtcactttgtcattggctttg 54  Q
    |||||||||| ||||||||||||||||||||||    
T  14847988 aaggtgacacatgtcactttgtcattggctttg 14847956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 15044927 - 15044883
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||||||| |||||||||||||||| ||| | ||||||||||    
T  15044927 aaaactcagagtcaatgacaaggtgacatgtgtctaggagttaac 15044883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 18469785 - 18469741
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||||||| |||||||||||||||| |||  |||||||||||    
T  18469785 aaaactcagagtcaatgacaaggtgacacgtgttcaggagttaac 18469741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Original strand, 18470069 - 18470097
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaa 257  Q
    |||||||||||||||||||||||||||||    
T  18470069 agttaagggaccaaagcgatatcaattaa 18470097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 20558631 - 20558587
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| | || |||||||    
T  20558631 aaaactcagagccaatgacaaggtgacacgtgtctagaagttaac 20558587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 33200450 - 33200486
Alignment:
Q  157 ctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||| | ||||||||||||||||||||||||    
T  33200450 ctaacggaaacctaacagaatggaccaaaacgagact 33200486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 83264 - 83308
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  83264 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac 83308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 1840 - 1884
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  1840 aaaactcagagccaatgacaaggtgacacgtgtccaggagttaac 1884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 1607 - 1571
Alignment:
Q  157 ctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  1607 ctaacggaaatctaacagaagggaccaaaacgagact 1571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 4107 - 4142
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  4107 gacaaggtgacacgtgtcactttgtcattggctttg 4142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 217843 - 217808
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  217843 gacaaggtgacacgtgtcactttgtcattggctttg 217808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 217939 - 217904
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttg 54  Q
    ||||||||||||||||||||||||||||||||||||    
T  217939 gacaaggtgacacgtgtcactttgtcattggctttg 217904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 218030 - 218119
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacg 188  Q
    |||||||||||||||||||||||||||| ||| | ||||||||||         ||||||||||||||| | ||||||| |||||||||||    
T  218030 aaaactcagagccaatgacaaggtgacacgtgtctaggagttaac-ttttttttaaaccctaacggaaacctaacagaagggaccaaaacg 218119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 217763 - 217719
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||||    
T  217763 aaaactcagagccaatgacaaggtgacacgtgtccaggggttaac 217719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 59930 - 59891
Alignment:
Q  102 ctcagagccaatgacaaggtgacaagtgcccaggagttaa 141  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  59930 ctcagagcaaatgacaaggtgacaagtgtccaggagttaa 59891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 60028 - 59990
Alignment:
Q  19 gacaaggtgacacgtgtcactttgtcattggctttgaga 57  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  60028 gacaaggtgacacgtgtcactttgacattggctatgaga 59990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 133378 - 133284
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaacnnnnnnnnnaaaccctaacggaaatccaacagaatggaccaaaacgagact 193  Q
    |||||||| ||||||||||||||||||| ||| ||| ||||||||         ||||||||||||||| | ||||||| || |||||||||||||    
T  133378 aaaactcatagccaatgacaaggtgacacgtgtccaagagttaac-ttttttttaaaccctaacggaaacctaacagaagggtccaaaacgagact 133284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 12261 - 12221
Alignment:
Q  102 ctcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    |||||||||||||||||||||||| ||| | ||||||||||    
T  12261 ctcagagccaatgacaaggtgacacgtgtctaggagttaac 12221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000004; HSPs: 3)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 40282 - 40238
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||| |||||||||||||||||||| ||| ||| ||||||||    
T  40282 aaaactccgagccaatgacaaggtgacacgtgtccatgagttaac 40238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 257
Target Start/End: Complemental strand, 124996 - 124968
Alignment:
Q  229 agttaagggaccaaagcgatatcaattaa 257  Q
    |||||||||||||||||||||||||||||    
T  124996 agttaagggaccaaagcgatatcaattaa 124968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 125119 - 125075
Alignment:
Q  98 aaaactcagagccaatgacaaggtgacaagtgcccaggagttaac 142  Q
    ||||||||||| |||||||||||||||| ||| |||||| |||||    
T  125119 aaaactcagagtcaatgacaaggtgacacgtgtccaggaattaac 125075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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