View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7745_low_16 (Length: 410)
Name: NF7745_low_16
Description: NF7745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7745_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 391
Target Start/End: Original strand, 4564367 - 4564758
Alignment:
| Q |
1 |
atcaaaattaaatgatacatgttatacaaatttt-agatgattttatttctacaaaatgtagtatgttaatttgtcactaaaatgaattttctcaatgaa |
99 |
Q |
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| T |
4564367 |
atcaaaatcagacgatacatgttacacaattttttagatgattttatttctacaaaatgtagtatgttaatttgtcactaaaatgaatttcttcaatgaa |
4564466 |
T |
|
| Q |
100 |
tacatcaaaattattagatgaaaattaatcaactcatattttaaactcaataaattaaatctataaaacaaaatttgtaatctaagtcatctgatcttca |
199 |
Q |
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||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||| |
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| T |
4564467 |
tacatcaaaattattagatgaaaattagtcaactcgtattttaaattcaataaattaaatctataaaacaaaatttgtaatctaagccgtctgatcttca |
4564566 |
T |
|
| Q |
200 |
tctaacagatgaaaaatatgattgatgattttcaatgaatagacgcataggagaagagagagatctaggaagggttaaaagaatcaaattccttaataaa |
299 |
Q |
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| || |||| ||||||||| |||||||||||||||||||||| ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
4564567 |
tgcaatagataaaaaatatggttgatgattttcaatgaatagatgcatatgagagaagagagatataggaagggttaaaagaatcaaattccttaataaa |
4564666 |
T |
|
| Q |
300 |
gaaacaagagaaagaaggttaagtgaaagttgtgtatgtgaatgtgtgggtcatatatggtcatttccttcctaccacttccatgtgaacgt |
391 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4564667 |
gaaacaagagaaagaaggttaagtgaaagttgtgtatgtgaatgtgtgggtcatatatggtcatttccttcctaccacttccatgtgaacgt |
4564758 |
T |
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