View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7745_low_38 (Length: 279)
Name: NF7745_low_38
Description: NF7745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7745_low_38 |
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Alignment Details
Target: chr8 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 29606319 - 29606580
Alignment:
| Q |
1 |
aagtcaccagttccaaaagctacgactccaacatctgctcctgtgaaaccgccagttccaaaggttgcaactccaacggttgcaccggctaaaccactgg |
100 |
Q |
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| T |
29606319 |
aagtcaccagttccaaaagctacgactccaacatctgctcctgtgaaaccgccagttccaaaggttgcaactccaacggttgcaccggctaaaccactgg |
29606418 |
T |
|
| Q |
101 |
ttcccaaagttacaactccaacagctgcacctgtgaaaccaatagttccaaaaactacaactccaacatctgctcctttgaaaccaccagttccgaaagc |
200 |
Q |
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| T |
29606419 |
ttcccaaagttacaactccaacagctgcacctgtgaaaccaatagttccaaaaactacaactccaacatctgctcctttgaaaccaccagttccgaaagc |
29606518 |
T |
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| Q |
201 |
tcccgcaccaaaaccttctcctgtgaaaccaccagttccaaaatcaaaacctccaacaactg |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29606519 |
tcccgcaccaaaaccttctcctgtgaaaccaccagttccaaaatcaaaacctccaacaactg |
29606580 |
T |
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