View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7745_low_48 (Length: 244)
Name: NF7745_low_48
Description: NF7745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7745_low_48 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 17 - 232
Target Start/End: Complemental strand, 4565155 - 4564940
Alignment:
| Q |
17 |
aaatattcactataatatttaagtcaaaagactctcccatgtaatagaaaccatgcatgaataatccttataatgcacccacaatagtggttgcaaatct |
116 |
Q |
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|||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4565155 |
aaatgttcactataatatttaagtcaaaagactctctcatgtaatagaaaccatgcatgaataatccttataatgcacccacaatagtggttgcaaatct |
4565056 |
T |
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| Q |
117 |
cacaatttatatctatatatcaaaaatacccaagtatgggaggaaaagtgagaacccatcaaagtgcaattctgagaaagtgagatatgtatgagaatat |
216 |
Q |
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||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4565055 |
cacaatttagatctatatatcaaaagtacccaagtatgggaggaaaagtgagaacccatcaaagtgcaattctgagaaagtgagatatgtatgagaatat |
4564956 |
T |
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| Q |
217 |
ttgatcatgtgcattt |
232 |
Q |
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|||||||||||||||| |
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| T |
4564955 |
ttgatcatgtgcattt |
4564940 |
T |
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