View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7746_high_14 (Length: 264)
Name: NF7746_high_14
Description: NF7746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7746_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 34600429 - 34600172
Alignment:
| Q |
1 |
atcatttgcatttcatatataagccagaaaaa-ttgattgcactttttctcttgcttcttattgtgttccaacatcttcataaagatatttgttgacttt |
99 |
Q |
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|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34600429 |
atcatttgcatttcatatataagccaaaaaaaattgattgcactttttctcttgcttcttattgtgttccaacatcttcataaagatatttgttgacttt |
34600330 |
T |
|
| Q |
100 |
atctagttagtgctaataacaagcacacttgaacacatggttagtagacaaatta---------tttgttatcatcaaaacaataattgcaagatattgt |
190 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
34600329 |
atctagttagtgctaataacaagcacacttgaacacacggttagtagacaaattattgttttgctttgttatcatcaaaacaataattgcaagatattgt |
34600230 |
T |
|
| Q |
191 |
atttgaaccaaactagttcttataaattgcctatcactaatattatgaatatccttcc |
248 |
Q |
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| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34600229 |
acttgaaccaaactagttcttataaattgcctatcactaatattatgaatatccttcc |
34600172 |
T |
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