View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7746_low_8 (Length: 410)

Name: NF7746_low_8
Description: NF7746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7746_low_8
NF7746_low_8
[»] chr7 (40 HSPs)
chr7 (166-398)||(21804566-21804798)
chr7 (170-398)||(42242152-42242380)
chr7 (172-398)||(38163339-38163565)
chr7 (169-398)||(33916944-33917173)
chr7 (171-398)||(3840640-3840867)
chr7 (172-398)||(27138528-27138754)
chr7 (171-398)||(31373459-31373686)
chr7 (172-398)||(21341826-21342052)
chr7 (172-398)||(21669984-21670210)
chr7 (171-398)||(16376544-16376771)
chr7 (172-398)||(17178237-17178464)
chr7 (165-398)||(40968894-40969127)
chr7 (169-398)||(27903414-27903643)
chr7 (172-398)||(13786173-13786399)
chr7 (168-398)||(15109661-15109891)
chr7 (172-398)||(21656631-21656857)
chr7 (174-398)||(43933546-43933770)
chr7 (186-398)||(24924082-24924294)
chr7 (204-398)||(21753524-21753718)
chr7 (196-366)||(39030276-39030446)
chr7 (352-398)||(31096703-31096749)
chr7 (181-232)||(31097881-31097932)
chr7 (355-398)||(15109930-15109973)
chr7 (171-208)||(11001323-11001360)
chr7 (184-237)||(32661033-32661086)
chr7 (355-398)||(3840912-3840955)
chr7 (355-398)||(16376812-16376855)
chr7 (355-398)||(17178508-17178551)
chr7 (355-398)||(21341737-21341780)
chr7 (355-398)||(21656547-21656590)
chr7 (355-398)||(21669895-21669938)
chr7 (355-398)||(21804842-21804885)
chr7 (355-398)||(27138798-27138841)
chr7 (355-398)||(31373370-31373413)
chr7 (355-398)||(33917217-33917260)
chr7 (355-398)||(42242424-42242467)
chr7 (171-233)||(13765318-13765380)
chr7 (357-398)||(43933815-43933856)
chr7 (171-207)||(15494151-15494187)
chr7 (355-395)||(24924001-24924041)
[»] chr3 (48 HSPs)
chr3 (166-398)||(38653921-38654153)
chr3 (171-398)||(12264203-12264430)
chr3 (171-398)||(43363610-43363837)
chr3 (172-398)||(49672565-49672791)
chr3 (172-398)||(1941720-1941946)
chr3 (172-398)||(21098307-21098533)
chr3 (172-398)||(34121358-34121584)
chr3 (170-398)||(49506347-49506575)
chr3 (172-398)||(3898425-3898651)
chr3 (172-398)||(54073030-54073259)
chr3 (172-398)||(26948801-26949027)
chr3 (170-398)||(20671252-20671480)
chr3 (171-398)||(36076453-36076680)
chr3 (172-398)||(4584434-4584660)
chr3 (174-398)||(31488414-31488638)
chr3 (174-398)||(39146443-39146667)
chr3 (170-398)||(45557882-45558110)
chr3 (172-398)||(49478211-49478437)
chr3 (166-356)||(40014647-40014837)
chr3 (177-398)||(55041588-55041815)
chr3 (214-398)||(24119210-24119394)
chr3 (204-326)||(26051334-26051457)
chr3 (170-278)||(6460166-6460273)
chr3 (334-398)||(26052240-26052304)
chr3 (181-232)||(37099713-37099764)
chr3 (172-237)||(5189787-5189852)
chr3 (355-398)||(1941990-1942033)
chr3 (355-398)||(3898338-3898381)
chr3 (355-398)||(12264115-12264158)
chr3 (355-398)||(20671166-20671209)
chr3 (355-398)||(21098219-21098262)
chr3 (355-398)||(26052349-26052392)
chr3 (355-398)||(26948689-26948732)
chr3 (355-398)||(31488329-31488372)
chr3 (355-398)||(34121271-34121314)
chr3 (355-398)||(38654198-38654241)
chr3 (355-398)||(43363881-43363924)
chr3 (355-398)||(49478124-49478167)
chr3 (355-398)||(49672478-49672521)
chr3 (181-212)||(53556920-53556951)
chr3 (355-398)||(55041858-55041901)
chr3 (172-226)||(13364022-13364076)
chr3 (171-225)||(46921423-46921477)
chr3 (184-213)||(5561565-5561594)
chr3 (171-208)||(20370357-20370394)
chr3 (357-398)||(36076723-36076764)
chr3 (167-208)||(37252308-37252349)
chr3 (172-208)||(25437286-25437322)
[»] chr4 (52 HSPs)
chr4 (169-398)||(52434627-52434856)
chr4 (170-398)||(16917886-16918114)
chr4 (172-398)||(30824922-30825148)
chr4 (172-398)||(37651669-37651895)
chr4 (171-398)||(53143261-53143488)
chr4 (172-398)||(12090459-12090686)
chr4 (170-397)||(16904950-16905177)
chr4 (171-398)||(31965968-31966195)
chr4 (172-398)||(33139471-33139697)
chr4 (172-398)||(37590804-37591030)
chr4 (169-398)||(46256037-46256266)
chr4 (169-397)||(35760585-35760813)
chr4 (181-398)||(44376088-44376305)
chr4 (166-398)||(39058351-39058583)
chr4 (172-398)||(48118534-48118757)
chr4 (171-398)||(41387129-41387356)
chr4 (171-390)||(47142799-47143018)
chr4 (174-398)||(45976992-45977216)
chr4 (195-398)||(31628510-31628713)
chr4 (196-398)||(52098214-52098417)
chr4 (174-398)||(54624960-54625177)
chr4 (221-398)||(45782478-45782655)
chr4 (234-398)||(50229768-50229933)
chr4 (212-266)||(50229712-50229766)
chr4 (171-213)||(18209699-18209741)
chr4 (170-237)||(22289953-22290020)
chr4 (181-231)||(19745228-19745278)
chr4 (181-231)||(19794528-19794578)
chr4 (171-211)||(26724134-26724174)
chr4 (182-213)||(11238181-11238212)
chr4 (355-398)||(12090730-12090773)
chr4 (355-398)||(16905218-16905261)
chr4 (355-398)||(16918158-16918201)
chr4 (181-216)||(23976715-23976750)
chr4 (355-398)||(30825192-30825235)
chr4 (355-398)||(31966239-31966282)
chr4 (279-326)||(34684603-34684650)
chr4 (355-398)||(39058622-39058665)
chr4 (355-398)||(45977264-45977307)
chr4 (355-398)||(47143070-47143113)
chr4 (355-398)||(48118802-48118845)
chr4 (355-398)||(52098460-52098503)
chr4 (355-398)||(52434540-52434583)
chr4 (355-398)||(53143534-53143577)
chr4 (355-398)||(54624879-54624922)
chr4 (172-214)||(18258213-18258255)
chr4 (183-237)||(37340614-37340667)
chr4 (171-208)||(8371079-8371116)
chr4 (171-207)||(23143186-23143222)
chr4 (171-207)||(34708175-34708211)
chr4 (177-237)||(35903633-35903693)
chr4 (358-398)||(50229979-50230019)
[»] chr5 (45 HSPs)
chr5 (170-398)||(34107336-34107564)
chr5 (171-398)||(38246864-38247091)
chr5 (172-398)||(20874691-20874917)
chr5 (172-398)||(34110655-34110881)
chr5 (171-398)||(16526305-16526532)
chr5 (170-398)||(2398940-2399166)
chr5 (170-398)||(10729440-10729668)
chr5 (172-398)||(17373161-17373390)
chr5 (172-398)||(20655049-20655275)
chr5 (179-398)||(1395992-1396211)
chr5 (172-398)||(33375765-33375993)
chr5 (207-398)||(33570342-33570533)
chr5 (170-398)||(5479199-5479427)
chr5 (181-398)||(25099245-25099462)
chr5 (181-398)||(25158335-25158552)
chr5 (219-398)||(14141154-14141333)
chr5 (211-398)||(27647933-27648120)
chr5 (172-322)||(40177120-40177270)
chr5 (214-398)||(6940545-6940729)
chr5 (190-390)||(24223182-24223382)
chr5 (208-398)||(29275627-29275817)
chr5 (227-398)||(1394541-1394712)
chr5 (235-398)||(17913744-17913907)
chr5 (172-237)||(8179753-8179818)
chr5 (181-237)||(30088711-30088767)
chr5 (181-237)||(30096285-30096341)
chr5 (355-398)||(1395907-1395950)
chr5 (355-398)||(2399210-2399253)
chr5 (355-398)||(5479115-5479158)
chr5 (355-398)||(6940768-6940811)
chr5 (355-398)||(10729712-10729755)
chr5 (355-398)||(14141377-14141420)
chr5 (355-398)||(16526577-16526620)
chr5 (355-398)||(17373434-17373477)
chr5 (355-398)||(20874604-20874647)
chr5 (355-398)||(24223434-24223477)
chr5 (355-398)||(27647845-27647888)
chr5 (355-398)||(33570578-33570621)
chr5 (355-398)||(34107608-34107651)
chr5 (355-398)||(34110566-34110609)
chr5 (355-398)||(38247135-38247178)
chr5 (355-398)||(40177033-40177076)
chr5 (181-209)||(4082591-4082619)
chr5 (181-209)||(16349724-16349752)
chr5 (171-211)||(19391258-19391298)
[»] chr2 (34 HSPs)
chr2 (170-398)||(18351554-18351782)
chr2 (172-398)||(41664513-41664739)
chr2 (171-398)||(6120555-6120782)
chr2 (172-398)||(41663240-41663466)
chr2 (172-398)||(44902085-44902310)
chr2 (171-398)||(20544828-20545055)
chr2 (171-398)||(8700264-8700491)
chr2 (171-390)||(19596362-19596581)
chr2 (174-398)||(31424012-31424236)
chr2 (172-398)||(42441963-42442193)
chr2 (168-398)||(26231255-26231485)
chr2 (170-325)||(27944794-27944949)
chr2 (172-398)||(36279455-36279680)
chr2 (172-398)||(42055202-42055428)
chr2 (172-398)||(34007714-34007935)
chr2 (203-398)||(999262-999457)
chr2 (213-388)||(16214837-16215012)
chr2 (197-326)||(692227-692356)
chr2 (3-82)||(16509285-16509364)
chr2 (172-231)||(25889039-25889097)
chr2 (181-232)||(31572450-31572501)
chr2 (355-398)||(19596634-19596677)
chr2 (172-237)||(2988885-2988950)
chr2 (169-222)||(22139558-22139611)
chr2 (108-140)||(16509206-16509238)
chr2 (355-398)||(6120467-6120510)
chr2 (355-398)||(16214741-16214784)
chr2 (355-398)||(18351467-18351510)
chr2 (355-398)||(26231527-26231570)
chr2 (355-398)||(31423924-31423967)
chr2 (355-398)||(34007980-34008023)
chr2 (355-398)||(41663152-41663195)
chr2 (355-398)||(42441876-42441919)
chr2 (170-208)||(17839249-17839287)
[»] scaffold0031 (1 HSPs)
scaffold0031 (171-398)||(46277-46504)
[»] chr8 (59 HSPs)
chr8 (171-398)||(30473883-30474110)
chr8 (172-398)||(15961135-15961361)
chr8 (160-398)||(32110849-32111087)
chr8 (169-398)||(44832183-44832412)
chr8 (171-398)||(10477940-10478167)
chr8 (171-398)||(18997703-18997930)
chr8 (172-398)||(6299020-6299246)
chr8 (171-398)||(995814-996041)
chr8 (170-398)||(18175384-18175612)
chr8 (166-398)||(11725193-11725425)
chr8 (170-397)||(28582859-28583086)
chr8 (172-398)||(24408879-24409105)
chr8 (174-398)||(18568868-18569092)
chr8 (172-398)||(18841907-18842133)
chr8 (172-390)||(35122322-35122540)
chr8 (174-398)||(28274217-28274440)
chr8 (196-398)||(39257446-39257648)
chr8 (195-398)||(40026803-40027006)
chr8 (172-390)||(44836920-44837138)
chr8 (177-398)||(11142464-11142691)
chr8 (171-366)||(39997726-39997921)
chr8 (204-398)||(18210656-18210850)
chr8 (221-398)||(19240666-19240843)
chr8 (221-398)||(19313850-19314027)
chr8 (211-398)||(19412834-19413022)
chr8 (224-398)||(24004779-24004953)
chr8 (283-398)||(23353688-23353803)
chr8 (204-398)||(25875322-25875525)
chr8 (172-230)||(23353622-23353680)
chr8 (341-398)||(18481929-18481986)
chr8 (181-237)||(405363-405419)
chr8 (172-219)||(19241008-19241055)
chr8 (172-219)||(19314192-19314239)
chr8 (355-398)||(39997665-39997708)
chr8 (181-237)||(17695597-17695653)
chr8 (181-237)||(44831143-44831199)
chr8 (355-398)||(6299290-6299333)
chr8 (355-398)||(10477853-10477896)
chr8 (355-398)||(11142381-11142424)
chr8 (355-398)||(11725106-11725149)
chr8 (355-398)||(18175297-18175340)
chr8 (355-398)||(18997616-18997659)
chr8 (355-398)||(19240580-19240623)
chr8 (355-398)||(19313764-19313807)
chr8 (355-398)||(19412752-19412795)
chr8 (355-398)||(23353846-23353889)
chr8 (355-398)||(24408795-24408838)
chr8 (355-398)||(30474153-30474196)
chr8 (355-398)||(32111131-32111174)
chr8 (355-398)||(35122585-35122628)
chr8 (355-398)||(39997580-39997623)
chr8 (355-398)||(44832457-44832500)
chr8 (355-398)||(44836824-44836867)
chr8 (355-397)||(18210893-18210935)
chr8 (171-208)||(24471872-24471909)
chr8 (172-213)||(34815244-34815285)
chr8 (172-209)||(40169720-40169757)
chr8 (172-208)||(5769490-5769526)
chr8 (172-208)||(11071961-11071997)
[»] chr6 (39 HSPs)
chr6 (171-398)||(12597264-12597491)
chr6 (174-398)||(19997668-19997892)
chr6 (172-398)||(33645945-33646171)
chr6 (172-398)||(28099597-28099823)
chr6 (171-398)||(2266771-2267006)
chr6 (167-397)||(13533771-13534001)
chr6 (171-398)||(17202435-17202662)
chr6 (171-398)||(3592896-3593123)
chr6 (172-398)||(10584728-10584954)
chr6 (172-398)||(15044725-15044951)
chr6 (172-398)||(2005431-2005657)
chr6 (171-297)||(1405562-1405688)
chr6 (239-398)||(17594819-17594979)
chr6 (275-398)||(8539603-8539726)
chr6 (274-398)||(25448752-25448876)
chr6 (208-307)||(33035527-33035626)
chr6 (172-231)||(8539723-8539782)
chr6 (172-237)||(6300709-6300774)
chr6 (172-237)||(6307519-6307584)
chr6 (171-213)||(162668-162710)
chr6 (181-237)||(8657073-8657129)
chr6 (172-214)||(14986391-14986433)
chr6 (171-237)||(15432336-15432402)
chr6 (174-222)||(25342639-25342687)
chr6 (355-398)||(2266684-2266727)
chr6 (355-398)||(10584996-10585039)
chr6 (355-398)||(12597535-12597578)
chr6 (355-398)||(15044639-15044682)
chr6 (355-398)||(17202348-17202391)
chr6 (355-398)||(17594733-17594776)
chr6 (355-398)||(19997580-19997623)
chr6 (181-216)||(24570763-24570798)
chr6 (355-398)||(28099868-28099911)
chr6 (181-216)||(33289079-33289114)
chr6 (355-398)||(33645858-33645901)
chr6 (172-222)||(2965459-2965509)
chr6 (172-213)||(24165091-24165132)
chr6 (172-237)||(30142984-30143049)
chr6 (172-208)||(2737142-2737178)
[»] chr1 (43 HSPs)
chr1 (171-398)||(34888685-34888912)
chr1 (172-398)||(4266384-4266610)
chr1 (172-398)||(38913747-38913973)
chr1 (172-398)||(2951366-2951592)
chr1 (172-384)||(1231813-1232025)
chr1 (171-398)||(23482706-23482933)
chr1 (196-398)||(50151063-50151265)
chr1 (170-398)||(9216034-9216262)
chr1 (166-398)||(38444634-38444866)
chr1 (172-398)||(18706509-18706734)
chr1 (177-390)||(35614078-35614291)
chr1 (171-398)||(7333947-7334174)
chr1 (171-398)||(18855232-18855458)
chr1 (172-398)||(52687114-52687339)
chr1 (172-326)||(31018200-31018354)
chr1 (174-326)||(50326076-50326228)
chr1 (212-398)||(39727983-39728169)
chr1 (211-390)||(35614827-35615005)
chr1 (215-390)||(19764593-19764768)
chr1 (172-266)||(29942153-29942247)
chr1 (205-289)||(5061335-5061419)
chr1 (267-398)||(2590338-2590468)
chr1 (263-398)||(19768467-19768602)
chr1 (172-219)||(52957058-52957105)
chr1 (171-215)||(2590466-2590510)
chr1 (181-237)||(29387896-29387952)
chr1 (181-237)||(28947463-28947519)
chr1 (169-208)||(26497649-26497688)
chr1 (187-233)||(14009849-14009895)
chr1 (176-232)||(36465864-36465920)
chr1 (355-398)||(1231725-1231768)
chr1 (355-398)||(2951636-2951679)
chr1 (355-398)||(4266297-4266340)
chr1 (355-398)||(18706773-18706816)
chr1 (355-398)||(19764814-19764857)
chr1 (355-398)||(19768382-19768425)
chr1 (355-398)||(23482972-23483015)
chr1 (355-398)||(35613984-35614027)
chr1 (355-398)||(35614734-35614777)
chr1 (355-398)||(38914017-38914060)
chr1 (355-398)||(52036310-52036353)
chr1 (171-208)||(4325453-4325490)
chr1 (358-398)||(7333863-7333903)
[»] scaffold0022 (2 HSPs)
scaffold0022 (172-398)||(149050-149276)
scaffold0022 (355-398)||(149318-149361)
[»] scaffold0173 (1 HSPs)
scaffold0173 (171-398)||(19350-19577)
[»] scaffold0836 (1 HSPs)
scaffold0836 (172-324)||(5278-5430)
[»] scaffold0515 (1 HSPs)
scaffold0515 (172-324)||(6061-6213)
[»] scaffold0306 (1 HSPs)
scaffold0306 (172-324)||(6071-6223)
[»] scaffold0896 (1 HSPs)
scaffold0896 (181-237)||(1081-1137)
[»] scaffold0316 (1 HSPs)
scaffold0316 (180-214)||(14730-14764)
[»] scaffold1234 (1 HSPs)
scaffold1234 (171-208)||(1047-1084)


Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 166 - 398
Target Start/End: Original strand, 21804566 - 21804798
Alignment:
Q  166 ataataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaat 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21804566 ataataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaat 21804665  T
Q  266 atgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcat 365  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||    
T  21804666 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcat 21804765  T
Q  366 tcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||||||||    
T  21804766 tcttttgttaaaattatatgtcaatattatatt 21804798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 170 - 398
Target Start/End: Original strand, 42242152 - 42242380
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42242152 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 42242251  T
Q  270 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctt 369  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||    
T  42242252 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctt 42242351  T
Q  370 ttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||||    
T  42242352 ttgttaaaattatatgtcaatattatatt 42242380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 38163339 - 38163565
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38163339 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 38163438  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  38163439 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 38163538  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  38163539 gttaaaattatatgtcaatattatatt 38163565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 169 - 398
Target Start/End: Original strand, 33916944 - 33917173
Alignment:
Q  169 ataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33916944 ataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 33917043  T
Q  269 tggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattct 368  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||| ||||||||    
T  33917044 tggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttatttcattct 33917143  T
Q  369 tttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||||    
T  33917144 tttgttaaaattatatgtcaatattatatt 33917173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 171 - 398
Target Start/End: Original strand, 3840640 - 3840867
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3840640 aactagactttccacccgtgctgccgcacgagtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 3840739  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  3840740 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 3840839  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  3840840 tgttaaaattatatgtcaatattatatt 3840867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 27138528 - 27138754
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27138528 actagactttccacccgtgctgccgcacaggtcatatacattctagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 27138627  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  27138628 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 27138727  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  27138728 gttaaaattatatgtcaatattatatt 27138754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 171 - 398
Target Start/End: Complemental strand, 31373686 - 31373459
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31373686 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 31373587  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||| ||||||||||||||    
T  31373586 gtcccaaatatatgcagatgttgaaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtattacttcattcttt 31373487  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  31373486 tgttaaaattatatgtcaatattatatt 31373459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 21342052 - 21341826
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |    
T  21342052 actagactttccacccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtag 21341953  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  21341952 tctcaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 21341853  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  21341852 gttaaaattatatgtcaatattatatt 21341826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 21670210 - 21669984
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21670210 actagactttccacccgtgctgccgcacaggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaatatgtgg 21670111  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  21670110 tcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 21670011  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||    
T  21670010 gttaaaattatatgtcaatgttatatt 21669984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 171 - 398
Target Start/End: Original strand, 16376544 - 16376771
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  16376544 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtg 16376643  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| ||| ||||||||||||||    
T  16376644 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttt 16376743  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||| |||||||    
T  16376744 tgttaaaattatatgtcaatgttatatt 16376771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 17178237 - 17178464
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17178237 actagactttccacccgtgctgccgcatgggtcatatacattgtagatatagtagacaaaaacaaatctcaattcatatcaaagagaatgaaatatgtgg 17178336  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcacc-nnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||||||||||||||  |||||||||||||||||    
T  17178337 tcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccaaaaaaaatattaatttttatcaatcgggtgttacttcattcttt 17178436  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  17178437 tgttaaaattatatgtcaatattatatt 17178464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 165 - 398
Target Start/End: Complemental strand, 40969127 - 40968894
Alignment:
Q  165 aataataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaa 264  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||    
T  40969127 aataaaaactagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacacaaacaaatctcaatgcatatcaaagagaataaaa 40969028  T
Q  265 tatgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttca 364  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| ||| ||||||||    
T  40969027 catgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttca 40968928  T
Q  365 ttcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||| |||||||    
T  40968927 ttcttttgttaaaattatatgtcaatgttatatt 40968894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 169 - 398
Target Start/End: Original strand, 27903414 - 27903643
Alignment:
Q  169 ataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 268  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||    
T  27903414 ataactagactttccacccgtgctgccgcacgggtcatatatattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatg 27903513  T
Q  269 tggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattct 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||| ||||| ||| ||||||||||||    
T  27903514 tggtcccaaatatatgcagatgttggaattcgaacctcatacaccacacttattcaccttaaaaatattaatttttaccaatcgtgtcttacttcattct 27903613  T
Q  369 tttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||| ||||||||| |||||||    
T  27903614 tttgttaaaattctatgtcaatgttatatt 27903643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 13786399 - 13786173
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  13786399 actagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtgg 13786300  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       ||||||||||||||||||  || |||||||||| ||||    
T  13786299 tcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgcgtcttacttcattttttt 13786200  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||    
T  13786199 gttaaaattatatgtcaatgttatatt 13786173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 168 - 398
Target Start/End: Original strand, 15109661 - 15109891
Alignment:
Q  168 aataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatat 267  Q
    |||||||||||||||||||||||||  ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15109661 aataactagactttccacccgtgctatcgcaccggacatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatat 15109760  T
Q  268 gtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattc 367  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |       |||||||||||||||||  |||||||||||||||    
T  15109761 gtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcatcttaaaagtattaatttttatcaattgtgtgttacttcattc 15109860  T
Q  368 ttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||| |||||||    
T  15109861 ttttgttaaaattatatgtcaatgttatatt 15109891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 21656857 - 21656631
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||| || ||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21656857 actagactttccacccgtgctaccacacgggtcatatacactgtagatgaagtagacaaaaacaaatctcaatgcatatcaaagagaataaaatatgtgg 21656758  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  21656757 tcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 21656658  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||    
T  21656657 gttaaaattatatgtcaatgttatatt 21656631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 174 - 398
Target Start/End: Original strand, 43933546 - 43933770
Alignment:
Q  174 tagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 273  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||    
T  43933546 tagactttccacccgtgctaccgcaagggtcatatacattgtagatgtagtagacaaaaaaaaatctcaatgcatataaaagagaataaaatatgtggtc 43933645  T
Q  274 ccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgt 373  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| |||||||||||||||||||||    
T  43933646 ccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 43933745  T
Q  374 taaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||| |||||||    
T  43933746 taaaattatatgtcaatgttatatt 43933770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 186 - 398
Target Start/End: Complemental strand, 24924294 - 24924082
Alignment:
Q  186 ccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgc 285  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  24924294 ccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgt 24924195  T
Q  286 agatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatg 385  Q
    ||||||||||||| |||||||| ||||||| ||||||||||       |||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  24924194 agatgttggaatttgaacctcagacaccacacttattcaccttaaaaatattaaattttatcaatcgtgtgttacttcattcttttgttaaaattatatg 24924095  T
Q  386 tcaatattatatt 398  Q
    ||||| |||||||    
T  24924094 tcaatgttatatt 24924082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 204 - 398
Target Start/End: Original strand, 21753524 - 21753718
Alignment:
Q  204 catatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaac 303  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||  |||||||||    
T  21753524 catatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtctcaaatatatgcagatgttaaaattcgaac 21753623  T
Q  304 ctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    || | ||||||| ||||||||||       |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||    
T  21753624 cttagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatatt 21753718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 196 - 366
Target Start/End: Original strand, 39030276 - 39030446
Alignment:
Q  196 gcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgga 295  Q
    |||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  39030276 gcacgggtcatatatattgtagatgtagtagacaaaaacaaatttcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttgga 39030375  T
Q  296 attcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcatt 366  Q
    |||||||||||| ||||||| ||||||||||       |||||||||||||||||| ||| ||||||||||    
T  39030376 attcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcatt 39030446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 398
Target Start/End: Complemental strand, 31096749 - 31096703
Alignment:
Q  352 atgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  31096749 atgtgttacttcattcttttgttaaaattatatgtcaatattatatt 31096703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 31097932 - 31097881
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaa 232  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  31097932 tccacccgtgctgccgcacgggtcatatacattgtaagtgtagtagacaaaa 31097881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 15109930 - 15109973
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  15109930 tgttacttcattcttttgtaaaaattatatgttaatattatatt 15109973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 11001323 - 11001360
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatat 208  Q
    |||||||| |||||||||||||||||||||||||||||    
T  11001323 aactagaccttccacccgtgctgccgcacgggtcatat 11001360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 32661086 - 32661033
Alignment:
Q  184 acccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    ||||||||||||||||| |||||||||||||||  | |||||||||||| ||||    
T  32661086 acccgtgctgccgcacgagtcatatacattgtaagtgtagtagacaaaagcaaa 32661033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 3840912 - 3840955
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  3840912 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 3840955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 16376812 - 16376855
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||| |||||| |||||||||||||||| |||||||    
T  16376812 tgttacttcattattttgtaaaaattatatgtcaatgttatatt 16376855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 17178508 - 17178551
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  17178508 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 17178551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 21341780 - 21341737
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  21341780 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 21341737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 21656590 - 21656547
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  21656590 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 21656547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 21669938 - 21669895
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  21669938 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 21669895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 21804842 - 21804885
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  21804842 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 21804885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 27138798 - 27138841
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  27138798 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 27138841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 31373413 - 31373370
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  31373413 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 31373370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 33917217 - 33917260
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  33917217 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 33917260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 42242424 - 42242467
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  42242424 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 42242467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 13765380 - 13765318
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaa 233  Q
    |||||||||||||||||||| |||||||| |||||| |||| |||| || ||  |||||||||    
T  13765380 aactagactttccacccgtgttgccgcacaggtcatgtacactgtaaatgtaacagacaaaaa 13765318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 398
Target Start/End: Original strand, 43933815 - 43933856
Alignment:
Q  357 ttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||| |||||||||||| ||| |||||||    
T  43933815 ttacttcattcttttgtaaaaattatatgttaatgttatatt 43933856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 15494151 - 15494187
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcata 207  Q
    |||||||| || |||||||||||||||||||||||||    
T  15494151 aactagaccttgcacccgtgctgccgcacgggtcata 15494187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 395
Target Start/End: Complemental strand, 24924041 - 24924001
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattat 395  Q
    ||||||||||||||||||| |||||||||||| ||| ||||    
T  24924041 tgttacttcattcttttgtaaaaattatatgttaatgttat 24924001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 166 - 398
Target Start/End: Original strand, 38653921 - 38654153
Alignment:
Q  166 ataataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaat 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38653921 ataataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaat 38654020  T
Q  266 atgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcat 365  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||    
T  38654021 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcat 38654120  T
Q  366 tcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||||||||    
T  38654121 tcttttgttaaaattatatgtcaatattatatt 38654153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 171 - 398
Target Start/End: Complemental strand, 12264430 - 12264203
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12264430 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 12264331  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  12264330 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 12264231  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  12264230 tgttaaaattatatgtcaatattatatt 12264203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 171 - 398
Target Start/End: Original strand, 43363610 - 43363837
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43363610 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 43363709  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  43363710 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 43363809  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  43363810 tgttaaaattatatgtcaatattatatt 43363837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 49672791 - 49672565
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49672791 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 49672692  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  49672691 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 49672592  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  49672591 gttaaaattatatgtcaatattatatt 49672565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 1941720 - 1941946
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1941720 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 1941819  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  1941820 tcccaaatatatgcagatgttggaattcgaacctcagacatcacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 1941919  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  1941920 gttaaaattatatgtcaatattatatt 1941946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 21098533 - 21098307
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21098533 actagactttccacccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 21098434  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  21098433 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 21098334  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  21098333 gttaaaattatatgtcaatattatatt 21098307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 34121584 - 34121358
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34121584 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatacgtgg 34121485  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  34121484 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 34121385  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  34121384 gttaaaattatatgtcaatattatatt 34121358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 170 - 398
Target Start/End: Original strand, 49506347 - 49506575
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49506347 taactagactttccacccgtactgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 49506446  T
Q  270 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctt 369  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||| ||||||||||||    
T  49506447 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtggtacttcattctt 49506546  T
Q  370 ttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||||    
T  49506547 ttgttaaaattatatgtcaatattatatt 49506575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 3898651 - 3898425
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3898651 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatattaaagagaatgaaatatgtgg 3898552  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  3898551 tcccaaatatatgcagatgttggaatttgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 3898452  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  3898451 gttaaaattatatgtcaatattatatt 3898425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 54073259 - 54073030
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatata---cattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 268  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54073259 actagactttccacccgtgctgccgcacgggtcatatagtacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 54073160  T
Q  269 tggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattct 368  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||    
T  54073159 tggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattct 54073060  T
Q  369 tttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||||    
T  54073059 tttgttaaaattatatgtcaatattatatt 54073030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 26949027 - 26948801
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26949027 actagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 26948928  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||| ||||||||||| |||||||||||||||||||    
T  26948927 tcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaacttttatcaatcgtgtgttacttcattctttt 26948828  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||    
T  26948827 gttaaaattatatgtcaatgttatatt 26948801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 170 - 398
Target Start/End: Complemental strand, 20671480 - 20671252
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20671480 taactagactttccacccgtgctgccacacgagtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 20671381  T
Q  270 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctt 369  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| |||||||||||||||||    
T  20671380 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctt 20671281  T
Q  370 ttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||| |||||||    
T  20671280 ttgttaaaattatatgtcaatgttatatt 20671252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 171 - 398
Target Start/End: Original strand, 36076453 - 36076680
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36076453 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatattaaagagaatgaaatatgtg 36076552  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  36076553 gtcccaaatatatgcagatgttggaattcgaacttcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 36076652  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||| |||||||    
T  36076653 tgttaaaattatatgtcaatgttatatt 36076680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 4584434 - 4584660
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4584434 actagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 4584533  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||       |||||||||||||||||| ||| |||||||||||||||    
T  4584534 tcccaaatatatgcagatgttggaatttgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattctttt 4584633  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||    
T  4584634 gttaaaattatatgtcaatgttatatt 4584660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 174 - 398
Target Start/End: Complemental strand, 31488638 - 31488414
Alignment:
Q  174 tagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 273  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  31488638 tagactttccatccgtgctgccgcacgggttatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgttgtc 31488539  T
Q  274 ccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgt 373  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| |||||||||| ||||||||||    
T  31488538 ccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactttattcttttgt 31488439  T
Q  374 taaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||| |||||||    
T  31488438 taaaattatatgtcaatgttatatt 31488414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 174 - 398
Target Start/End: Complemental strand, 39146667 - 39146443
Alignment:
Q  174 tagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 273  Q
    ||||||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  39146667 tagactttccatctgtgttgccgcacgggtcatatacattgtagatgtagtagacaaaaataaatctcaatgcatatcaaagagaataaaatatgtggtc 39146568  T
Q  274 ccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgt 373  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| ||| |||||||||||||||||    
T  39146567 ccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgt 39146468  T
Q  374 taaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||| |||||||    
T  39146467 taaaattatatgtcaatgttatatt 39146443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 170 - 398
Target Start/End: Original strand, 45557882 - 45558110
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    ||||||||||||||||| ||||| ||| || ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45557882 taactagactttccaccagtgctaccgtacaggtcatatatattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 45557981  T
Q  270 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctt 369  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| ||||||||||       |||||||||||||||||| ||| |||||||||||||    
T  45557982 ggtcccaagtatatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtattacttcattctt 45558081  T
Q  370 ttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||||    
T  45558082 ttgttaaaattatatgtcaatattatatt 45558110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 49478437 - 49478211
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||  ||||||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  49478437 actagactttccacccgtgctgccgcacgagtcatttacattgtagacgtagtagataaaaacaaatctcaatacatatcaaagataatgaaatatgtgg 49478338  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  49478337 tcccaaatatatgcaaatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 49478238  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
     |||||||||||||||||| |||||||    
T  49478237 attaaaattatatgtcaatgttatatt 49478211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 166 - 356
Target Start/End: Original strand, 40014647 - 40014837
Alignment:
Q  166 ataataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaat 265  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  40014647 ataattactagactttccacccgtgctgccgcacgggtcatatacattgtagatataataaacaaaaacaaatctcaatgcatatcaaagagaatgaaat 40014746  T
Q  266 atgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtg 356  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||    
T  40014747 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtg 40014837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 177 - 398
Target Start/End: Original strand, 55041588 - 55041815
Alignment:
Q  177 actttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtccca 276  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  55041588 actttccacccgtgctaccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggttcca 55041687  T
Q  277 aatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntatta------atttttatcaatcatgtgttacttcattcttt 370  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||||||||       |||||      ||||||||||||| |||||||||||| |||||    
T  55041688 aatatatgcagatgtttgaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatttttatcaatcgtgtgttacttcactcttt 55041787  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||| |||||||    
T  55041788 tgttaaaattatatgtcaatgttatatt 55041815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 214 - 398
Target Start/End: Complemental strand, 24119394 - 24119210
Alignment:
Q  214 gtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacacc 313  Q
    |||||| |||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||    
T  24119394 gtagatgtagtagacaaaaacaaatctcaatgcatattaaagataatgaaatatatggtcccaaatatatgcagatgttggaattcaaacctcagacacc 24119295  T
Q  314 acgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    || ||||||||||       |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  24119294 acacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 24119210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 204 - 326
Target Start/End: Original strand, 26051334 - 26051457
Alignment:
Q  204 catatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggt-cccaaatatatgcagatgttggaattcgaa 302  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||    
T  26051334 catatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtccccaaatatatgctgaggttggaattcgaa 26051433  T
Q  303 cctcatacaccacgcttattcacc 326  Q
    ||||| ||||||||||||||||||    
T  26051434 cctcagacaccacgcttattcacc 26051457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 170 - 278
Target Start/End: Original strand, 6460166 - 6460273
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  6460166 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatacatatcaaa-agaataaaatatgt 6460264  T
Q  270 ggtcccaaa 278  Q
    |||||||||    
T  6460265 ggtcccaaa 6460273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 26052240 - 26052304
Alignment:
Q  334 tattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  26052240 tattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 26052304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 37099764 - 37099713
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaa 232  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  37099764 tccacccgtgctgccgcacgggtcatatacattgtaagtgtagtagacaaaa 37099713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 5189787 - 5189852
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    |||||||||| |||||||||| ||||| |||||||||| | |||| | ||||||||||||| ||||    
T  5189787 actagactttacacccgtgctaccgcaagggtcatatataatgtaaaaatagtagacaaaagcaaa 5189852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 1941990 - 1942033
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  1941990 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 1942033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 3898381 - 3898338
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  3898381 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 3898338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 12264158 - 12264115
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  12264158 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 12264115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 20671209 - 20671166
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  20671209 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 20671166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 21098262 - 21098219
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  21098262 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 21098219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 26052349 - 26052392
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  26052349 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 26052392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 26948732 - 26948689
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  26948732 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 26948689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 31488372 - 31488329
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  31488372 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 31488329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 34121314 - 34121271
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  34121314 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 34121271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 38654198 - 38654241
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  38654198 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 38654241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 43363881 - 43363924
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  43363881 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 43363924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 49478167 - 49478124
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  49478167 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 49478124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 49672521 - 49672478
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  49672521 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 49672478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 212
Target Start/End: Original strand, 53556920 - 53556951
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacat 212  Q
    ||||||||||||||||||||||||||||||||    
T  53556920 tccacccgtgctgccgcacgggtcatatacat 53556951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 55041858 - 55041901
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  55041858 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 55041901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 13364022 - 13364076
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtag 226  Q
    ||||||| || ||||  |||||||||||||||||||||||||||| || ||||||    
T  13364022 actagacatttcacctctgctgccgcacgggtcatatacattgtatatgtagtag 13364076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 46921423 - 46921477
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagta 225  Q
    ||||||||||| ||||||||||  |||||| |||||||||| |||| ||||||||    
T  46921423 aactagacttttcacccgtgctttcgcacgagtcatatacaatgtaaatatagta 46921477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 213
Target Start/End: Original strand, 5561565 - 5561594
Alignment:
Q  184 acccgtgctgccgcacgggtcatatacatt 213  Q
    ||||||||||||||||||||||||||||||    
T  5561565 acccgtgctgccgcacgggtcatatacatt 5561594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 20370357 - 20370394
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatat 208  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  20370357 aactagaccatccacccgtgctgccgcacgggtcatat 20370394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 398
Target Start/End: Original strand, 36076723 - 36076764
Alignment:
Q  357 ttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||| |||||||||||| ||| |||||||    
T  36076723 ttacttcattcttttgtaaaaattatatgttaatgttatatt 36076764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 37252308 - 37252349
Alignment:
Q  167 taataactagactttccacccgtgctgccgcacgggtcatat 208  Q
    |||||||||||| || |||||||||||| |||||||||||||    
T  37252308 taataactagaccttgcacccgtgctgctgcacgggtcatat 37252349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 25437322 - 25437286
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatat 208  Q
    ||||||| || ||||||||||||||||||||||||||    
T  25437322 actagaccttgcacccgtgctgccgcacgggtcatat 25437286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 201; Significance: 1e-109; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 169 - 398
Target Start/End: Complemental strand, 52434856 - 52434627
Alignment:
Q  169 ataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52434856 ataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 52434757  T
Q  269 tggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattct 368  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||    
T  52434756 tggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattct 52434657  T
Q  369 tttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||||    
T  52434656 tttgttaaaattatatgtcaatattatatt 52434627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 170 - 398
Target Start/End: Original strand, 16917886 - 16918114
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16917886 taactagactttccacctgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 16917985  T
Q  270 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctt 369  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||    
T  16917986 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctt 16918085  T
Q  370 ttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||||    
T  16918086 ttgttaaaattatatgtcaatattatatt 16918114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 30824922 - 30825148
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30824922 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 30825021  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    | |||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  30825022 ttccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 30825121  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  30825122 gttaaaattatatgtcaatattatatt 30825148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 37651895 - 37651669
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37651895 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatgaaagagaatgaaatatgtgg 37651796  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  37651795 tctcaaatatatgcagatgttggaattcgaacctcaaacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 37651696  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  37651695 gttaaaattatatgtcaatattatatt 37651669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 171 - 398
Target Start/End: Original strand, 53143261 - 53143488
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  53143261 aactagatttttcacccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 53143360  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  53143361 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 53143460  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  53143461 tgttaaaattatatgtcaatattatatt 53143488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 12090459 - 12090686
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12090459 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 12090558  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttca-ttcttt 370  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||| |       |||||||||||||||||| |||||||||||| ||||||    
T  12090559 tcccaaatatatgtagatgttggaattcgaacctcagacaccacgcttattcaaccaaaaaatattaatttttatcaatcgtgtgttacttcatttcttt 12090658  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  12090659 tgttaaaattatatgtcaatattatatt 12090686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 170 - 397
Target Start/End: Original strand, 16904950 - 16905177
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16904950 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 16905049  T
Q  270 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctt 369  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||  |||||||||||||||||    
T  16905050 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaattgtgtgttacttcattctt 16905149  T
Q  370 ttgttaaaattatatgtcaatattatat 397  Q
    ||||||||||||||||||||| ||||||    
T  16905150 ttgttaaaattatatgtcaatgttatat 16905177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 171 - 398
Target Start/End: Original strand, 31965968 - 31966195
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || ||| ||| ||||||||||||||||||||||||||||||||||||    
T  31965968 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatttattatacataaataaatctcaatgcatatcaaagagaatgaaatatgtg 31966067  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  31966068 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 31966167  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  31966168 tgttaaaattatatgtcaatattatatt 31966195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 33139471 - 33139697
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  33139471 actagactttccacccgtgctgccgcacgggtcatatacattgtagatttagtagacaaaaacaaatctcaatgcatatcaaagagaattaaatatgttg 33139570  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||||||       |||||||||||||||||| ||| |||||||||||||||    
T  33139571 tcccaaatatatgcagatgttggaattcgaacctcagacaccacatttattcaccttaaaaatattaatttttatcaatcgtgtattacttcattctttt 33139670  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||    
T  33139671 gttaaaattatatgtcaatgttatatt 33139697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 37590804 - 37591030
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  37590804 actagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaatcaaatctcaatgcatatcaaagagaataaaacatgtgg 37590903  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||       |||||||||||||||||||||| |||||||||||||||    
T  37590904 tcccaaatatatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcatgtcttacttcattctttt 37591003  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||    
T  37591004 gttaaaattatatgtcaatgttatatt 37591030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 169 - 398
Target Start/End: Complemental strand, 46256266 - 46256037
Alignment:
Q  169 ataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 268  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  46256266 ataagtagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaatatg 46256167  T
Q  269 tggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattct 368  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||       |||||||||||||||||| | | ||||||||||||    
T  46256166 tggtcccaaatatatgcagatgttggaattggaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtatcttacttcattct 46256067  T
Q  369 tttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||| |||||||    
T  46256066 tttgttaaaattatatgtcaatgttatatt 46256037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 169 - 397
Target Start/End: Complemental strand, 35760813 - 35760585
Alignment:
Q  169 ataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 268  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  35760813 ataactagattttccacccgtgctgccgcacgagtcatatacattgtagatatagtagataaaaataaatctcaatgtatatcaaagagaatgaaatatg 35760714  T
Q  269 tggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattct 368  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||       |||||||||||||||||| ||||||||||||||||    
T  35760713 tggtcccaaatatatgcagatgttggaattcgaacctcaaacaccacaattattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattct 35760614  T
Q  369 tttgttaaaattatatgtcaatattatat 397  Q
    |||||||||||||||||||||| ||||||    
T  35760613 tttgttaaaattatatgtcaatgttatat 35760585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 181 - 398
Target Start/End: Original strand, 44376088 - 44376305
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaata 280  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  44376088 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcacaaata 44376187  T
Q  281 tatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaatt 380  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  44376188 tatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaatt 44376287  T
Q  381 atatgtcaatattatatt 398  Q
    |||||||||| |||||||    
T  44376288 atatgtcaatgttatatt 44376305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 166 - 398
Target Start/End: Original strand, 39058351 - 39058583
Alignment:
Q  166 ataataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaat 265  Q
    |||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||||||    
T  39058351 ataaaaactagattttccacctgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaattttaatatatatcaaagagaatgaaat 39058450  T
Q  266 atgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcat 365  Q
    ||||||||||||||||||  |||||||||||||||||||||| | ||||| ||||||||||       ||||||||||||||||||||||||||||||||    
T  39058451 atgtggtcccaaatatatcaagatgttggaattcgaacctcagataccacacttattcaccttaaaaatattaatttttatcaatcatgtgttacttcat 39058550  T
Q  366 tcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||| |||||||    
T  39058551 tcttttgttaaaattatatgtcaatgttatatt 39058583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 48118534 - 48118757
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48118534 actagactttccacccgtgctgccgcacgagtcatatacattgtagat---gtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtgg 48118630  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||| | ||||||||       |||||||||||| ||||| |||||||||||||||||||    
T  48118631 tcccaaatatatgcagatgttggaattcgaacctcaaacaccacacgtattcaccttaaaaatattaatttttaccaatcgtgtgttacttcattctttt 48118730  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||    
T  48118731 gttaaaattatatgtcaatgttatatt 48118757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 171 - 398
Target Start/End: Complemental strand, 41387356 - 41387129
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  41387356 aactagactttccatccgtgctgccgtacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtg 41387257  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    |||||||||||||||||||| || ||||||||||||| ||||||| ||||||||||       |||||||||||||| ||| ||| ||||||||||||||    
T  41387256 gtcccaaatatatgcagatgctgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcgatcgtgtcttacttcattcttt 41387157  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||| |||||||    
T  41387156 tgttaaaattatatgtcaatgttatatt 41387129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 171 - 390
Target Start/End: Original strand, 47142799 - 47143018
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47142799 aactagactttccacccgtgctgccgcactggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgacatatgtg 47142898  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||| |||||||||||||||||| |||||||||||||| |||||| |||||||||||       |||||||||||||| ||  ||||||||||||||||||    
T  47142899 gtctcaaatatatgcagatgttagaattcgaacctcagacaccatgcttattcaccttaaaaatattaatttttatcgattgtgtgttacttcattcttt 47142998  T
Q  371 tgttaaaattatatgtcaat 390  Q
    |||||||||||||| |||||    
T  47142999 tgttaaaattatatctcaat 47143018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 174 - 398
Target Start/End: Original strand, 45976992 - 45977216
Alignment:
Q  174 tagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 273  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  45976992 tagactttccatccgtgctgctgcacgggtcatatacatcgtagatgtagtagataaaaataaatatcaatgcatatcaaagagaatgaaatatgtggtc 45977091  T
Q  274 ccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgt 373  Q
    | |||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||  |||||||||||||||||||||    
T  45977092 ctaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaattgtgtgttacttcattcttttgt 45977191  T
Q  374 taaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||| |||||||    
T  45977192 taaaattatatgtcaatgttatatt 45977216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 195 - 398
Target Start/End: Original strand, 31628510 - 31628713
Alignment:
Q  195 cgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgg 294  Q
    ||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  31628510 cgcacgggtcatatacattgtagatgttgtagacaaaaacatatctcaatgcatatcaaagagaattaaatatgtggtctcaaatatatgcagatgttgg 31628609  T
Q  295 aattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatatta 394  Q
    ||||||||||||||||||||| |||||||| |       ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  31628610 aattcgaacctcatacaccacacttattcatcttaaaaatattattttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtta 31628709  T
Q  395 tatt 398  Q
    ||||    
T  31628710 tatt 31628713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 196 - 398
Target Start/End: Original strand, 52098214 - 52098417
Alignment:
Q  196 gcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgga 295  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52098214 gcacgggtcatatacactgtaaatatagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgga 52098313  T
Q  296 attcgaacctcatacaccacgcttattcaccnnnnnnntatt-aatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatatta 394  Q
    |||| ||| ||| |||| || ||||||||||       |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  52098314 attcaaacttcagacacaacacttattcaccttaaaaatattaaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtta 52098413  T
Q  395 tatt 398  Q
    ||||    
T  52098414 tatt 52098417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 174 - 398
Target Start/End: Complemental strand, 54625177 - 54624960
Alignment:
Q  174 tagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 273  Q
    |||| |||||||  ||| || ||||||||| ||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  54625177 tagattttccacatgtgatgtcgcacgggttatatacattgtagacgtagtagacaaaaacaaatcttaatgcatatcaaagagaatgaaatatgtggtc 54625078  T
Q  274 ccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgt 373  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||      ||||||||||||| |||||    
T  54625077 ccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatca------tgttacttcattc-tttgt 54624985  T
Q  374 taaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||| |||||||    
T  54624984 taaaattatatgtcaatgttatatt 54624960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 221 - 398
Target Start/End: Original strand, 45782478 - 45782655
Alignment:
Q  221 tagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgctta 320  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||| ||||||| ||||    
T  45782478 tagtagacaaaaataaatctcaatatatatcaaagagaatgaaatatgtggtcctaaatatatgaagatgttggaatttgaacctcagacaccacactta 45782577  T
Q  321 ttcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||       |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  45782578 ttcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 45782655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 234 - 398
Target Start/End: Original strand, 50229768 - 50229933
Alignment:
Q  234 caaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnn 333  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||  ||||||||||           
T  50229768 caaatctcaatgcatatcaaagagaatgaaacatgtggtccaaaatatatgcagatgttggaattcgaacctcagacaccatacttattcaccttaaaaa 50229867  T
Q  334 tattaa-tttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  50229868 tattaattttttatcaatagtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 50229933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 50229712 - 50229766
Alignment:
Q  212 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaata 266  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  50229712 ttgtagatgtagtagacaaaaaaaaatctcaatgcatatcaaagagaatgaaata 50229766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 18209741 - 18209699
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacatt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18209741 aactagactttccacccgtgctgccgcacgggtcatatacatt 18209699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 22289953 - 22290020
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    ||||||||| || |||||||||||||||||| ||||||||||||| | || ||| || ||||||||||    
T  22289953 taactagaccttgcacccgtgctgccgcacgagtcatatacattgaaaatgtagaaggcaaaaacaaa 22290020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 19745278 - 19745228
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaa 231  Q
    ||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  19745278 tccacccgtgcggccgcacgggtcatatacattgtaagtgtagtagacaaa 19745228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 19794528 - 19794578
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaa 231  Q
    ||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  19794528 tccacccgtgcggccgcacgggtcatatacattgtaagtgtagtagacaaa 19794578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 26724174 - 26724134
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatataca 211  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  26724174 aactagacttttcacccgtgctgccgcacgggttatataca 26724134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 213
Target Start/End: Complemental strand, 11238212 - 11238181
Alignment:
Q  182 ccacccgtgctgccgcacgggtcatatacatt 213  Q
    ||||||||||||||||||||||||||||||||    
T  11238212 ccacccgtgctgccgcacgggtcatatacatt 11238181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 12090730 - 12090773
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  12090730 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 12090773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 16905218 - 16905261
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  16905218 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 16905261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 16918158 - 16918201
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  16918158 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 16918201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 23976715 - 23976750
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgta 216  Q
    ||||||||||||||||||||||||||||| ||||||    
T  23976715 tccacccgtgctgccgcacgggtcatatatattgta 23976750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 30825192 - 30825235
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  30825192 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 30825235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 31966239 - 31966282
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  31966239 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 31966282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 326
Target Start/End: Original strand, 34684603 - 34684650
Alignment:
Q  279 tatatgcagatgttggaattcgaacctcatacaccacgcttattcacc 326  Q
    |||||||||| |||||||||||||||||| ||||| | ||||||||||    
T  34684603 tatatgcagaggttggaattcgaacctcagacaccccacttattcacc 34684650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 39058622 - 39058665
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  39058622 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 39058665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 45977264 - 45977307
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  45977264 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 45977307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 47143070 - 47143113
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  47143070 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 47143113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 48118802 - 48118845
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  48118802 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 48118845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 52098460 - 52098503
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  52098460 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 52098503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 52434583 - 52434540
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  52434583 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 52434540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 53143534 - 53143577
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  53143534 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 53143577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 54624922 - 54624879
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  54624922 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 54624879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 18258213 - 18258255
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattg 214  Q
    |||||||| || | |||||||||||||||||||||||||||||    
T  18258213 actagactgtctatccgtgctgccgcacgggtcatatacattg 18258255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 37340614 - 37340667
Alignment:
Q  183 cacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    ||||||||||| ||||||||||||||||| |||| | ||||||||||||| ||||    
T  37340614 cacccgtgctgacgcacgggtcatatacaatgta-aaatagtagacaaaagcaaa 37340667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 8371079 - 8371116
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatat 208  Q
    |||||||| || ||||||||||||||||||||||||||    
T  8371079 aactagaccttgcacccgtgctgccgcacgggtcatat 8371116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 23143186 - 23143222
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcata 207  Q
    |||||||| || |||||||||||||||||||||||||    
T  23143186 aactagaccttgcacccgtgctgccgcacgggtcata 23143222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 34708211 - 34708175
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcata 207  Q
    |||||||| || |||||||||||||||||||||||||    
T  34708211 aactagaccttgcacccgtgctgccgcacgggtcata 34708175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 35903693 - 35903633
Alignment:
Q  177 actttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    |||||||| || || |||||||||| |||||||||| ||| || |||||||||||| ||||    
T  35903693 actttccatccatgttgccgcacggatcatatacatcgtaaatgtagtagacaaaagcaaa 35903633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 398
Target Start/End: Original strand, 50229979 - 50230019
Alignment:
Q  358 tacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||| |||||||||||| ||| |||||||    
T  50229979 tacttcattcttttgtaaaaattatatgttaatgttatatt 50230019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 170 - 398
Target Start/End: Original strand, 34107336 - 34107564
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34107336 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 34107435  T
Q  270 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctt 369  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||    
T  34107436 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctt 34107535  T
Q  370 ttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||||    
T  34107536 ttgttaaaattatatgtcaatattatatt 34107564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 171 - 398
Target Start/End: Original strand, 38246864 - 38247091
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38246864 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 38246963  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  38246964 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 38247063  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  38247064 tgttaaaattatatgtcaatattatatt 38247091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 20874917 - 20874691
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20874917 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 20874818  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  20874817 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 20874718  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  20874717 gttaaaattatatgtcaatattatatt 20874691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 34110881 - 34110655
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34110881 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 34110782  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  34110781 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 34110682  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  34110681 gttaaaattatatgtcaatattatatt 34110655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 171 - 398
Target Start/End: Original strand, 16526305 - 16526532
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16526305 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 16526404  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||| ||||||    
T  16526405 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcgttcttt 16526504  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  16526505 tgttaaaattatatgtcaatattatatt 16526532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 170 - 398
Target Start/End: Original strand, 2398940 - 2399166
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2398940 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 2399039  T
Q  270 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctt 369  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       ||||||||||||||||||  ||||||||||||||||    
T  2399040 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatc--gtgttacttcattctt 2399137  T
Q  370 ttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||||    
T  2399138 ttgttaaaattatatgtcaatattatatt 2399166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 170 - 398
Target Start/End: Original strand, 10729440 - 10729668
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10729440 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatccaagagaatgaaatatgt 10729539  T
Q  270 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctt 369  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       ||||| |||||||||||| |||||||||||||||||    
T  10729540 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattattttttatcaatcgtgtgttacttcattctt 10729639  T
Q  370 ttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||||    
T  10729640 ttgttaaaattatatgtcaatattatatt 10729668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 17373161 - 17373390
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatata---cattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 268  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17373161 actagactttccacccgtgctgccgcacgggtcatatagtacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 17373260  T
Q  269 tggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattct 368  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||    
T  17373261 tggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattct 17373360  T
Q  369 tttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||||    
T  17373361 tttgttaaaattatatgtcaatattatatt 17373390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 20655049 - 20655275
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  20655049 actagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtgg 20655148  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||  ||| |||||||||||||||    
T  20655149 tcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaattgtgtcttacttcattctttt 20655248  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||    
T  20655249 gttaaaattatatgtcaatgttatatt 20655275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 179 - 398
Target Start/End: Complemental strand, 1396211 - 1395992
Alignment:
Q  179 tttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaa 278  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1396211 tttccacccgtgctgccgcacgggtcatatacattgcagatgtagcagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaa 1396112  T
Q  279 tatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaa 378  Q
    ||| ||||||||||||||||||||||||| ||||||| ||||||||||       ||||||||||||||| || ||||||||||||||||||||||||||    
T  1396111 tatctgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcagtcgtgtgttacttcattcttttgttaaaa 1396012  T
Q  379 ttatatgtcaatattatatt 398  Q
    |||||||||||| |||||||    
T  1396011 ttatatgtcaatgttatatt 1395992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 33375993 - 33375765
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg- 270  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||     
T  33375993 actaaactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtgg 33375894  T
Q  271 -gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctt 369  Q
     ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| ||| |||||||||||||    
T  33375893 tgtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattctt 33375794  T
Q  370 ttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||| |||||||    
T  33375793 ttgttaaaattatatgtcaatgttatatt 33375765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 207 - 398
Target Start/End: Original strand, 33570342 - 33570533
Alignment:
Q  207 atacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctc 306  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33570342 atacattgtagatatagtagacaaaaacaaatctcaatgcataccaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctc 33570441  T
Q  307 atacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    | ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33570442 agacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatatt 33570533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 170 - 398
Target Start/End: Complemental strand, 5479427 - 5479199
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    |||||||||||| |||| ||| || ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5479427 taactagacttttcacctgtgttgtcgcacgggtcatatacattgtagatgtagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgt 5479328  T
Q  270 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctt 369  Q
    | ||||||||||||| |||||||||||||||||||||| |||| || ||||||||||       |||||||||||||||||| |||||||||||||||||    
T  5479327 gatcccaaatatatgtagatgttggaattcgaacctcagacactacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctt 5479228  T
Q  370 ttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||| |||||||    
T  5479227 ttgttaaaattatatgtcaatgttatatt 5479199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 181 - 398
Target Start/End: Original strand, 25099245 - 25099462
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaata 280  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||||    
T  25099245 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctgaatgcatatcaaagagaataaaacatgtggtcacaaata 25099344  T
Q  281 tatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaatt 380  Q
    |||||||||||||||||||||||||||  |||||| ||||||| ||       |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  25099345 tatgcagatgttggaattcgaacctcaggcaccacacttattcgccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaatt 25099444  T
Q  381 atatgtcaatattatatt 398  Q
    |||||||||| |||||||    
T  25099445 atatgtcaatgttatatt 25099462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 181 - 398
Target Start/End: Original strand, 25158335 - 25158552
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaata 280  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||||    
T  25158335 tccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctgaatgcatatcaaagagaataaaacatgtggtcacaaata 25158434  T
Q  281 tatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaatt 380  Q
    |||||||||||||||||||||||||||  |||||| ||||||| ||       |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  25158435 tatgcagatgttggaattcgaacctcaggcaccacacttattcgccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaatt 25158534  T
Q  381 atatgtcaatattatatt 398  Q
    |||||||||| |||||||    
T  25158535 atatgtcaatgttatatt 25158552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 219 - 398
Target Start/End: Original strand, 14141154 - 14141333
Alignment:
Q  219 tatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgct 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14141154 tatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgct 14141253  T
Q  319 tattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||       |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  14141254 tattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgccaatattatatt 14141333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 211 - 398
Target Start/End: Complemental strand, 27648120 - 27647933
Alignment:
Q  211 attgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatac 310  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  27648120 attgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatacagatgttggaattcgaacctcagac 27648021  T
Q  311 accacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||| ||||||||||       |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  27648020 accacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 27647933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 172 - 322
Target Start/End: Complemental strand, 40177270 - 40177120
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40177270 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatataaaagagaatgaaatatgtgg 40177171  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttatt 322  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40177170 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttatt 40177120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 214 - 398
Target Start/End: Original strand, 6940545 - 6940729
Alignment:
Q  214 gtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacacc 313  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6940545 gtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacacc 6940644  T
Q  314 acgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    || ||||||||||       |||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |||||||    
T  6940645 acacttattcacctgaaaaatattaatttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaacgttatatt 6940729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 190 - 390
Target Start/End: Original strand, 24223182 - 24223382
Alignment:
Q  190 gctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagat 289  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24223182 gctgccgcacgggtcatatacatcgtagatgtagtagacaaaaacaaatctcaatgcatatgaaagagaatgaaatatgtggtcccaaatatatgcagat 24223281  T
Q  290 gttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaa 389  Q
    |||||||||||||||||| ||||||| ||||||||||       ||||| | |||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  24223282 gttggaattcgaacctcagacaccacacttattcaccttaaaaatattactctttaccaatcgtgtgttacttcattcttttgttaaaagtatatgtcaa 24223381  T
Q  390 t 390  Q
    |    
T  24223382 t 24223382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 208 - 398
Target Start/End: Complemental strand, 29275817 - 29275627
Alignment:
Q  208 tacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctca 307  Q
    |||||||||||| || ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29275817 tacattgtagatgtaatagacaaaaacaaatttcaatgcatatcaaagagaatgaaacatgtggtcccaaatatatgcagatgttggaattcgaacctca 29275718  T
Q  308 tacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
     ||||||| ||||||||||       |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  29275717 gacaccacacttattcaccttaaaaatattaacttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 29275627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 227 - 398
Target Start/End: Original strand, 1394541 - 1394712
Alignment:
Q  227 acaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcacc 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  1394541 acaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcaaacaccacacttgttcacc 1394640  T
Q  327 nnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
           |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||    
T  1394641 ttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaatttatatgtcaatgttatatt 1394712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 235 - 398
Target Start/End: Complemental strand, 17913907 - 17913744
Alignment:
Q  235 aaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnnt 334  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||| | ||||| ||||||||||       |    
T  17913907 aaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgtagatgttggaattcgaacctcaaataccacacttattcaccttaaaaat 17913808  T
Q  335 attaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||| |||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||    
T  17913807 attaatctttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatatt 17913744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 8179753 - 8179818
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||| ||| ||||    
T  8179753 actagactttccacccgtgctgccgcacggatcatatatattgtagatgtagtagaccaaagcaaa 8179818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 30088711 - 30088767
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    |||| |||||||||||||||||||||||||||||||  ||| |||||||||||||||    
T  30088711 tccatccgtgctgccgcacgggtcatatacattgtaagtattgtagacaaaaacaaa 30088767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 30096285 - 30096341
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    ||||||||||||||||||||| ||||||||||||||  ||| |||||||||| ||||    
T  30096285 tccacccgtgctgccgcacggatcatatacattgtaagtattgtagacaaaagcaaa 30096341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 1395950 - 1395907
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  1395950 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 1395907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 2399210 - 2399253
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  2399210 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 2399253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 5479158 - 5479115
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  5479158 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 5479115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 6940768 - 6940811
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  6940768 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 6940811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 10729712 - 10729755
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  10729712 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 10729755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 14141377 - 14141420
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  14141377 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 14141420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 16526577 - 16526620
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  16526577 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 16526620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 17373434 - 17373477
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  17373434 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 17373477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 20874647 - 20874604
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  20874647 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 20874604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 24223434 - 24223477
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  24223434 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 24223477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 27647888 - 27647845
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  27647888 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 27647845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 33570578 - 33570621
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  33570578 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 33570621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 34107608 - 34107651
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  34107608 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 34107651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 34110609 - 34110566
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  34110609 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 34110566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 38247135 - 38247178
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  38247135 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 38247178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 40177076 - 40177033
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  40177076 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 40177033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 209
Target Start/End: Complemental strand, 4082619 - 4082591
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatata 209  Q
    |||||||||||||||||||||||||||||    
T  4082619 tccacccgtgctgccgcacgggtcatata 4082591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 209
Target Start/End: Original strand, 16349724 - 16349752
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatata 209  Q
    |||||||||||||||||||||||||||||    
T  16349724 tccacccgtgctgccgcacgggtcatata 16349752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 19391298 - 19391258
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatataca 211  Q
    ||||||||||| || ||||||| ||||||||||||||||||    
T  19391298 aactagacttttcatccgtgctaccgcacgggtcatataca 19391258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 170 - 398
Target Start/End: Complemental strand, 18351782 - 18351554
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18351782 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 18351683  T
Q  270 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctt 369  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||    
T  18351682 ggtcccaaatatatgcagatgttggaattcgaacctcaaacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctt 18351583  T
Q  370 ttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||||    
T  18351582 ttgttaaaattatatgtcaatattatatt 18351554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 41664739 - 41664513
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41664739 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 41664640  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  41664639 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 41664540  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  41664539 gttaaaattatatgtcaatattatatt 41664513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 171 - 398
Target Start/End: Complemental strand, 6120782 - 6120555
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6120782 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 6120683  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  6120682 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 6120583  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    |||||||| |||||||||||||||||||    
T  6120582 tgttaaaactatatgtcaatattatatt 6120555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 41663466 - 41663240
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41663466 actagactttccacccgtgctgccgcatgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 41663367  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  41663366 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 41663267  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  41663266 gttaaaattatatgtcaatattatatt 41663240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 44902310 - 44902085
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44902310 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 44902211  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||        || ||||||||||||||| |||||||||||||||||||    
T  44902210 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcacaaaaaaaata-taatttttatcaatcgtgtgttacttcattctttt 44902112  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  44902111 gttaaaattatatgtcaatattatatt 44902085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 171 - 398
Target Start/End: Complemental strand, 20545055 - 20544828
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20545055 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatggtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 20544956  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    |||||||||||||||||||||| |||||||||||| | ||||||||||||||||||       |||||||||||||||||| |||| |||||||||||||    
T  20544955 gtcccaaatatatgcagatgttagaattcgaacctaaaacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtggtacttcattcttt 20544856  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  20544855 tgttaaaattatatgtcaatattatatt 20544828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 171 - 398
Target Start/End: Complemental strand, 8700491 - 8700264
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8700491 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatttcaatgcatatcaaagagaatgaaatatgtg 8700392  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||  || ||||||       |||||||||||||||||| ||||||||||||||||||    
T  8700391 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacattttttcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 8700292  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||| |||||||    
T  8700291 tgttaaaattatatgtcaatgttatatt 8700264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 171 - 390
Target Start/End: Original strand, 19596362 - 19596581
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19596362 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatattaaagagaatgaaatatgtg 19596461  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||  ||||||||||||||||||    
T  19596462 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccttaaaaatattaatttttatcaattgtgtgttacttcattcttt 19596561  T
Q  371 tgttaaaattatatgtcaat 390  Q
    ||||||||||||||||||||    
T  19596562 tgttaaaattatatgtcaat 19596581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 174 - 398
Target Start/End: Complemental strand, 31424236 - 31424012
Alignment:
Q  174 tagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 273  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31424236 tagactttccacccgtgctgccgcacgagtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 31424137  T
Q  274 ccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgt 373  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||  |||||||||||||||||||||    
T  31424136 ccaaatatatgtagatgttggaattcgaacctcatacaccacacttattcaccttaaaaatattaatttttatcaattgtgtgttacttcattcttttgt 31424037  T
Q  374 taaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||| |||||||    
T  31424036 taaaattatatgtcaatgttatatt 31424012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 42442193 - 42441963
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42442193 actagactttccacccgtgttgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 42442094  T
Q  272 tcccaaatatatgcagatgttggaatt------cgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcat 365  Q
    |||||||||||||||||||||||||||      ||||||||| ||||||||||||||||||       ||||||||||||||||||  ||||||||||||    
T  42442093 tcccaaatatatgcagatgttggaattcgaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatc--gtgttacttcat 42441996  T
Q  366 tcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||||||||    
T  42441995 tcttttgttaaaattatatgtcaatattatatt 42441963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 168 - 398
Target Start/End: Original strand, 26231255 - 26231485
Alignment:
Q  168 aataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatat 267  Q
    ||||| |||||||| |||||||||| |||||| ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  26231255 aataattagacttttcacccgtgctaccgcacaggttatatacattgtagatgtagtagacaaaaacaaatttcaatgcatatcaaagagaatgaaatat 26231354  T
Q  268 gtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattc 367  Q
    |||||| ||||||||| ||||||||||||||||||||||| ||||||| |||||||| |       |||||||||||||||||| |||||||||||||||    
T  26231355 gtggtctcaaatatattcagatgttggaattcgaacctcagacaccacacttattcatcttaaaaatattaatttttatcaatcgtgtgttacttcattc 26231454  T
Q  368 ttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||| |||||||    
T  26231455 ttttgttaaaattatatgtcaatgttatatt 26231485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 170 - 325
Target Start/End: Original strand, 27944794 - 27944949
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27944794 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 27944893  T
Q  270 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcac 325  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27944894 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcac 27944949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 36279455 - 36279680
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  36279455 actagactttccacccgtgc-gtagcacgagtcatatacattgtagatgtagtagacaaaaacaaatatcaatgtatatcaaagagaatgaaatatgtgg 36279553  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    ||||||||||||||||||||||||||||||| |||| | ||||| ||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  36279554 tcccaaatatatgcagatgttggaattcgaatctcagataccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 36279653  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||    
T  36279654 gttaaaattatatgtcaatgttatatt 36279680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 42055428 - 42055202
Alignment:
Q  172 actagactttccacccgtgctgc--cgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42055428 actagactttccacccgtgctacaccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaataggt 42055329  T
Q  270 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctt 369  Q
    | |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| |||||||||||||||||    
T  42055328 gatcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctt 42055229  T
Q  370 ttgttaaaattatatgtcaatattatatt 398  Q
    ||||||| ||  ||||||||| |||||||    
T  42055228 ttgttaagat--tatgtcaatgttatatt 42055202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 34007714 - 34007935
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||||||||||||||||||     |||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34007714 actagactttccacccgtgct-----acgggtaatatccattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtag 34007808  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| ||||| ||||       ||||||||||||| |||| |||||||||||||||||||    
T  34007809 tcccaaatatatgccgatgttggaattcgaacctcagacaccacacttatccaccttaaaaatattaatttttataaatcgtgtgttacttcattctttt 34007908  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||    
T  34007909 gttaaaattatatgtcaatgttatatt 34007935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 203 - 398
Target Start/End: Original strand, 999262 - 999457
Alignment:
Q  203 tcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaa 302  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||    
T  999262 tcatatactttgtagatgtagtagataaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgtagatgttggaattcgaa 999361  T
Q  303 cctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||| ||||||| ||||||||||       |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||    
T  999362 cctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatatt 999457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 213 - 388
Target Start/End: Complemental strand, 16215012 - 16214837
Alignment:
Q  213 tgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacac 312  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||  ||||    
T  16215012 tgtagatgtagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtggtccaaaatatatgcaaatgtaggaattcgaacctctaacac 16214913  T
Q  313 cacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtca 388  Q
    ||| ||||||||||       ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  16214912 cacacttattcaccttaaaaatattaatttttattaatcgtgtgttacttcattcttttgttaaaattatatgtca 16214837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 197 - 326
Target Start/End: Original strand, 692227 - 692356
Alignment:
Q  197 cacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaa 296  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  692227 cacgggtcatatacattgtaaatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatatggtcccaaatatatgcagatgttggaa 692326  T
Q  297 ttcgaacctcatacaccacgcttattcacc 326  Q
    ||||||||||| ||||||| ||||||||||    
T  692327 ttcgaacctcagacaccacacttattcacc 692356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 16509364 - 16509285
Alignment:
Q  3 aaattaaggtaagtgaagcgcgtgtgttggtgctttggtttcttgtgttgttttggaaactttgtgcacgtgactgtagt 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16509364 aaattaaggtaagtgaagcgcgtgtgttggtgctttggtttcttgtgttgttttggaaactttgtgcacgtgactgtagt 16509285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 25889039 - 25889097
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaa 231  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| | ||||||||||||    
T  25889039 actagactttccactcgtgctgccgcacgggtcatatacaatgta-aaatagtagacaaa 25889097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 31572501 - 31572450
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaa 232  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  31572501 tccacccgtgctgccgcacgggtcatatacattgtaagtgtagtagacaaaa 31572450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 19596634 - 19596677
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  19596634 tgttacttcattcttttgttaaaattatatgttaatgttatatt 19596677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 2988950 - 2988885
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    |||||||||| |||||||||||||||| |||||||||||| || | | | | ||||||||||||||    
T  2988950 actagacttttcacccgtgctgccgcatgggtcatatacaatgcaaaaacaatagacaaaaacaaa 2988885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 22139558 - 22139611
Alignment:
Q  169 ataactagactttccacccgtgctgccgcacgggtcatatacattgtagatata 222  Q
    ||||||||||||| |||||||| ||| |||||||||||||||| |||| |||||    
T  22139558 ataactagacttttcacccgtgttgcagcacgggtcatatacaatgtaaatata 22139611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 16509238 - 16509206
Alignment:
Q  108 aggagaataaatagtgatgaaataaaatttagg 140  Q
    |||||||||||||||||||||||||||||||||    
T  16509238 aggagaataaatagtgatgaaataaaatttagg 16509206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 6120510 - 6120467
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  6120510 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 6120467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 16214784 - 16214741
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  16214784 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 16214741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 18351510 - 18351467
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  18351510 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 18351467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 26231527 - 26231570
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  26231527 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 26231570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 31423967 - 31423924
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  31423967 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 31423924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 34007980 - 34008023
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  34007980 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 34008023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 41663195 - 41663152
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  41663195 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 41663152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 42441919 - 42441876
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  42441919 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 42441876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 17839287 - 17839249
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatat 208  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  17839287 taactagaccatccacccgtgctgccgcacgggtcatat 17839249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 171 - 398
Target Start/End: Complemental strand, 46504 - 46277
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46504 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 46405  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  46404 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 46305  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  46304 tgttaaaattatatgtcaatattatatt 46277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 171 - 398
Target Start/End: Original strand, 30473883 - 30474110
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30473883 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 30473982  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  30473983 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 30474082  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  30474083 tgttaaaattatatgtcaatattatatt 30474110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 15961361 - 15961135
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15961361 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 15961262  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  15961261 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 15961162  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  15961161 gttaaaattatatgtcaatattatatt 15961135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 160 - 398
Target Start/End: Original strand, 32110849 - 32111087
Alignment:
Q  160 aaaagaataataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaa 259  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32110849 aaaataatagtaactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaa 32110948  T
Q  260 tgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgtta 359  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||    
T  32110949 tgaaatatgtggttccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgtta 32111048  T
Q  360 cttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32111049 cttcattcttttgttaaaattatatgtcaatattatatt 32111087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 169 - 398
Target Start/End: Original strand, 44832183 - 44832412
Alignment:
Q  169 ataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 268  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44832183 ataactagactttccacccgtgttgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatg 44832282  T
Q  269 tggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattct 368  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||    
T  44832283 tggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattct 44832382  T
Q  369 tttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||||    
T  44832383 tttgttaaaattatatgtcaatattatatt 44832412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 171 - 398
Target Start/End: Complemental strand, 10478167 - 10477940
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10478167 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 10478068  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  10478067 gtcacaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 10477968  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  10477967 tgttaaaattatatgtcaatattatatt 10477940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 171 - 398
Target Start/End: Complemental strand, 18997930 - 18997703
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18997930 aactagactatccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 18997831  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  18997830 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 18997731  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  18997730 tgttaaaattatatgtcaatattatatt 18997703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 6299020 - 6299246
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6299020 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 6299119  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||| |||    
T  6299120 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattccttt 6299219  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  6299220 gttaaaattatatgtcaatattatatt 6299246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 171 - 398
Target Start/End: Original strand, 995814 - 996041
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  995814 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 995913  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||       |||||| ||||||||||| ||||||||||||||||||    
T  995914 gtcccaaatatatgcatatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaacttttatcaatcgtgtgttacttcattcttt 996013  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  996014 tgttaaaattatatgtcaatattatatt 996041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 170 - 398
Target Start/End: Complemental strand, 18175612 - 18175384
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18175612 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 18175513  T
Q  270 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctt 369  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||| ||||||| | |||||||||||||||||    
T  18175512 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccaaaaaaatattaattattatcaaacgtgtgttacttcattctt 18175413  T
Q  370 ttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||||    
T  18175412 ttgttaaaattatatgtcaatattatatt 18175384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 166 - 398
Target Start/End: Complemental strand, 11725425 - 11725193
Alignment:
Q  166 ataataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaat 265  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11725425 ataaaaactagactttccacccgtgctgctgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaat 11725326  T
Q  266 atgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcat 365  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| |||||||||||||    
T  11725325 atgtggtctcaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcat 11725226  T
Q  366 tcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||| |||||||    
T  11725225 tcttttgttaaaattatatgtcaatgttatatt 11725193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 170 - 397
Target Start/End: Complemental strand, 28583086 - 28582859
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  28583086 taactagattttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagataaaaacaaatctcaatgtatatcaaagagaatgaaatatgt 28582987  T
Q  270 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctt 369  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| |||||||||||||||||    
T  28582986 ggtctcaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctt 28582887  T
Q  370 ttgttaaaattatatgtcaatattatat 397  Q
    ||||||||||||||||||||| ||||||    
T  28582886 ttgttaaaattatatgtcaatgttatat 28582859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 24409105 - 24408879
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  24409105 actagactttctacccgtgttgccgcacgggtcatatacattgtagatgtagtagataaaaacaaatcttaatgcatatcaaagataatgaaatatgtgg 24409006  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  24409005 tcccaaatatatgcagatgttggaattcgaacatcatacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 24408906  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||    
T  24408905 gttaaaattatatgtcaatgttatatt 24408879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 174 - 398
Target Start/End: Complemental strand, 18569092 - 18568868
Alignment:
Q  174 tagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 273  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  18569092 tagactttccacccgtgctaccgcacgggtcatatacattgtagatgttgtagacaaaaacatatctcaatgcatatcaaagagaataaaatatgtggtc 18568993  T
Q  274 ccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgt 373  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||| |       |||||||||||||||||| |||||||||||||||||||||    
T  18568992 ccaaatatatgcagatgttggaattcgaacctcaaacaccacacttattcatcttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 18568893  T
Q  374 taaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||| |||||||    
T  18568892 taaaattatatgtcaatgttatatt 18568868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 18842133 - 18841907
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18842133 actagactttccacccgttctgccgcacgggtcatatacattgtagatgtagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtgg 18842034  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    ||| ||||||||||||||||||||||||||| |||| ||||||| ||||||||||       |||||||||||||||||  | |||||||||||||||||    
T  18842033 tccaaaatatatgcagatgttggaattcgaatctcagacaccacacttattcaccttaaaaatattaatttttatcaattgtatgttacttcattctttt 18841934  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||    
T  18841933 gttaaaattatatgtcaatgttatatt 18841907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 172 - 390
Target Start/End: Original strand, 35122322 - 35122540
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35122322 actagactttccacccctgctgtcgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 35122421  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    ||| ||||||||||||||||||||||||||| |||| ||||||| ||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  35122422 tccaaaatatatgcagatgttggaattcgaatctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 35122521  T
Q  372 gttaaaattatatgtcaat 390  Q
     ||||||||||||||||||    
T  35122522 attaaaattatatgtcaat 35122540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 174 - 398
Target Start/End: Original strand, 28274217 - 28274440
Alignment:
Q  174 tagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 273  Q
    ||||||||||| |||||| || |||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28274217 tagactttccatccgtgcggc-gcacggatcatatacattgtagatgtagcagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 28274315  T
Q  274 ccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgt 373  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||| |||||||||||||||||||||    
T  28274316 ccaaatatacgcagatgttggaattcgaacctcatacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 28274415  T
Q  374 taaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||| |||||||    
T  28274416 taaaattatatgtcaatgttatatt 28274440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 196 - 398
Target Start/End: Complemental strand, 39257648 - 39257446
Alignment:
Q  196 gcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgga 295  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39257648 gcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgga 39257549  T
Q  296 attcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattat 395  Q
    ||| |||||||| ||||||| ||||||||||       |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  39257548 atttgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttat 39257449  T
Q  396 att 398  Q
    |||    
T  39257448 att 39257446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 195 - 398
Target Start/End: Complemental strand, 40027006 - 40026803
Alignment:
Q  195 cgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgg 294  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40027006 cgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagataatgaaatatgtggtcccaaatatatgcagatgttgg 40026907  T
Q  295 aattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatatta 394  Q
    |||| |||||||| ||||||| ||||||||||       |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  40026906 aatttgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtta 40026807  T
Q  395 tatt 398  Q
    ||||    
T  40026806 tatt 40026803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 172 - 390
Target Start/End: Complemental strand, 44837138 - 44836920
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||| ||||||||||    
T  44837138 actagcctttccacccgtgctgccgcacgggttatatacattgtagatgtagtagacaaaaataaatctcaatacatatcaaagagaataaaatatgtgg 44837039  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||  |||||||||||||||||||    
T  44837038 tcctaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccttaaaaatattaatttttatcaattgtgtgttacttcattctttt 44836939  T
Q  372 gttaaaattatatgtcaat 390  Q
    ||||||||||||| |||||    
T  44836938 gttaaaattatatctcaat 44836920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 177 - 398
Target Start/End: Complemental strand, 11142691 - 11142464
Alignment:
Q  177 actttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtccca 276  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11142691 actttccacccgtgctgccgcacggatcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgctccca 11142592  T
Q  277 aatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntatta------atttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||      ||||||||||||| ||||||||||||||||||    
T  11142591 aatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatttttatcaatcgtgtgttacttcattcttt 11142492  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||| | |||||||    
T  11142491 tgttaaaattatatgtcagtgttatatt 11142464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 171 - 366
Target Start/End: Complemental strand, 39997921 - 39997726
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39997921 aactagaatttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgtatatcaaagagaatgaaatatgtg 39997822  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcatt 366  Q
    || |||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| ||||||||||||||    
T  39997821 gttccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcacctttaaaatattaatttttatcaatcgtgtgttacttcatt 39997726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 204 - 398
Target Start/End: Original strand, 18210656 - 18210850
Alignment:
Q  204 catatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaac 303  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  18210656 catatacattgtagatatagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtggtctcaaatatatgcagatgttggaatttgaac 18210755  T
Q  304 ctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    |||| ||||||| ||||||||||       |||||||||||||||||| ||||||| ||| ||||||||||||| |||||||||||| |||||||    
T  18210756 ctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttatttccttcttttgttaaagttatatgtcaatgttatatt 18210850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 221 - 398
Target Start/End: Complemental strand, 19240843 - 19240666
Alignment:
Q  221 tagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgctta 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  19240843 tagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacactta 19240744  T
Q  321 ttcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||        |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  19240743 ttcacgttaaaaatattaatttttatcaatggtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 19240666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 221 - 398
Target Start/End: Complemental strand, 19314027 - 19313850
Alignment:
Q  221 tagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgctta 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  19314027 tagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacactta 19313928  T
Q  321 ttcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||        |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  19313927 ttcacgttaaaaatattaatttttatcaatggtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 19313850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 211 - 398
Target Start/End: Complemental strand, 19413022 - 19412834
Alignment:
Q  211 attgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatac 310  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  19413022 attgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagac 19412923  T
Q  311 accacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattc-ttttgttaaaattatatgtcaatattatatt 398  Q
    |||||  |||||||||       |||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||| |||||||    
T  19412922 accacagttattcaccttaaaaatattaatttttatccatcgtgtgttacttcattctttttgttaaaattatatgtcaatgttatatt 19412834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 224 - 398
Target Start/End: Original strand, 24004779 - 24004953
Alignment:
Q  224 tagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattc 323  Q
    ||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||    
T  24004779 tagacaaaatcaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttgaaattcgaacctcagacaccacacttattc 24004878  T
Q  324 accnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    |||       |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  24004879 accttaaaaatattaatttttatcaatcatgtcttacttcattcttttgttaaaattatatgtcaatgttatatt 24004953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 283 - 398
Target Start/End: Original strand, 23353688 - 23353803
Alignment:
Q  283 tgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattat 382  Q
    ||||||||||||||||||||||||| ||||| | ||||||||||       |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  23353688 tgcagatgttggaattcgaacctcagacaccccacttattcaccttaaaaatattaatttttatcaatggtgtgttacttcattcttttgttaaaattat 23353787  T
Q  383 atgtcaatattatatt 398  Q
    |||||||| |||||||    
T  23353788 atgtcaatgttatatt 23353803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 204 - 398
Target Start/End: Original strand, 25875322 - 25875525
Alignment:
Q  204 catatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaac 303  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||| ||||     |||||||||| ||||||||||||    
T  25875322 catatacatcgtagatatagtagacaaaaacaaatctcaatgcatattaaagagaataaaacatgtgctccc-----tatgcagatgctggaattcgaac 25875416  T
Q  304 ctcatac--------------accacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaa 389  Q
    |||| ||              |  || ||||||||||       |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  25875417 ctcagacatattaaagagaataaaacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaa 25875516  T
Q  390 tattatatt 398  Q
    | |||||||    
T  25875517 tgttatatt 25875525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 23353622 - 23353680
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaa 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23353622 actagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaa 23353680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 398
Target Start/End: Original strand, 18481929 - 18481986
Alignment:
Q  341 ttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||    
T  18481929 ttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatatt 18481986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 405363 - 405419
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||    
T  405363 tccacccgtgctgccgcacgggtcatatacattgtaagtatagtagacaaaagcaaa 405419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 19241055 - 19241008
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagat 219  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19241055 actagactttccacccgcgctgccgcacgggtcatatacattgtagat 19241008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 19314239 - 19314192
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagat 219  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19314239 actagactttccacccgcgctgccgcacgggtcatatacattgtagat 19314192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 39997708 - 39997665
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  39997708 tgttacttcattcttttgtaaaaattatatgtcaatgttatatt 39997665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 17695653 - 17695597
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    ||||||||||||||||||||||| ||||||||||||  | ||||||| |||| ||||    
T  17695653 tccacccgtgctgccgcacgggtaatatacattgtaagtgtagtagataaaagcaaa 17695597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 44831143 - 44831199
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    ||||||||||||||||| ||||||||||||||||||  | ||||||| |||| ||||    
T  44831143 tccacccgtgctgccgctcgggtcatatacattgtaagtgtagtagataaaagcaaa 44831199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 6299290 - 6299333
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  6299290 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 6299333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 10477896 - 10477853
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  10477896 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 10477853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 11142424 - 11142381
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  11142424 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 11142381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 11725149 - 11725106
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  11725149 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 11725106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 18175340 - 18175297
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  18175340 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 18175297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 18997659 - 18997616
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  18997659 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 18997616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 19240623 - 19240580
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  19240623 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 19240580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 19313807 - 19313764
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  19313807 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 19313764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 19412795 - 19412752
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  19412795 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 19412752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 23353846 - 23353889
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  23353846 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 23353889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 24408838 - 24408795
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  24408838 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 24408795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 30474153 - 30474196
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  30474153 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 30474196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 32111131 - 32111174
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  32111131 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 32111174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 35122585 - 35122628
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  35122585 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 35122628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 39997623 - 39997580
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  39997623 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 39997580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 44832457 - 44832500
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  44832457 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 44832500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 44836867 - 44836824
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  44836867 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 44836824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 18210893 - 18210935
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatat 397  Q
    ||||||||||||||||||| |||||||||||| ||| ||||||    
T  18210893 tgttacttcattcttttgtaaaaattatatgttaatgttatat 18210935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 24471909 - 24471872
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatat 208  Q
    |||||||| || ||||||||||||||||||||||||||    
T  24471909 aactagaccttgcacccgtgctgccgcacgggtcatat 24471872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 34815285 - 34815244
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacatt 213  Q
    |||||||||  ||||||||||| |||||||||||||||||||    
T  34815285 actagacttatcacccgtgctgacgcacgggtcatatacatt 34815244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 40169720 - 40169757
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatata 209  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  40169720 actagtctttccacccgtgctaccgcacgggtcatata 40169757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 5769490 - 5769526
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatat 208  Q
    ||||||| || ||||||||||||||||||||||||||    
T  5769490 actagaccttgcacccgtgctgccgcacgggtcatat 5769526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 11071961 - 11071997
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatat 208  Q
    ||||||| || ||||||||||||||||||||||||||    
T  11071961 actagaccttgcacccgtgctgccgcacgggtcatat 11071997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 171 - 398
Target Start/End: Original strand, 12597264 - 12597491
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12597264 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 12597363  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  12597364 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 12597463  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  12597464 tgttaaaattatatgtcaatattatatt 12597491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 174 - 398
Target Start/End: Complemental strand, 19997892 - 19997668
Alignment:
Q  174 tagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19997892 tagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 19997793  T
Q  274 ccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgt 373  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||||    
T  19997792 ccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgt 19997693  T
Q  374 taaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||    
T  19997692 taaaattatatgtcaatattatatt 19997668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 33646171 - 33645945
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33646171 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 33646072  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    | |||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  33646071 ttccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 33645972  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  33645971 gttaaaattatatgtcaatattatatt 33645945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 28099597 - 28099823
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28099597 actagactttccacccgtgctgccgcacgggtcatatacattgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 28099696  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  28099697 tcccaaatatatgctgatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 28099796  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  28099797 gttaaaattatatgtcaatattatatt 28099823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 171 - 398
Target Start/End: Complemental strand, 2267006 - 2266771
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2267006 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 2266907  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctca--------tacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttactt 362  Q
    |||||||||||||||||||||||||||||||||||||         ||||||||||||||||||       |||||||||||||||||| ||||||||||    
T  2266906 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 2266807  T
Q  363 cattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||||||||||    
T  2266806 cattcttttgttaaaattatatgtcaatattatatt 2266771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 167 - 397
Target Start/End: Complemental strand, 13534001 - 13533771
Alignment:
Q  167 taataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaata 266  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  13534001 taattactagattttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagataaaaacaaatctcaatgtatatcaaagagaatgaaata 13533902  T
Q  267 tgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcatt 366  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| ||||||||||||||    
T  13533901 tgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcatt 13533802  T
Q  367 cttttgttaaaattatatgtcaatattatat 397  Q
    |||||||||||||||||||||||| ||||||    
T  13533801 cttttgttaaaattatatgtcaatgttatat 13533771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 171 - 398
Target Start/End: Complemental strand, 17202662 - 17202435
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  17202662 aactagactttccacccgtgctgccgcacaagtcatatacattgtagatgtagtagacaaatacaaatcacaatgcatatcaaagagaatgaaatatgtg 17202563  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  17202562 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttt 17202463  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||| |||||||    
T  17202462 tgttaaaattatatgtcaatgttatatt 17202435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 171 - 398
Target Start/End: Complemental strand, 3593123 - 3592896
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3593123 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatccaagagaatgaaatatgtg 3593024  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
     |||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||       ||||||||||||| |||| ||||||||||||||||||    
T  3593023 atcccaaatatattcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatgaatcgtgtgttacttcattcttt 3592924  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||| ||||| |||||||    
T  3592923 tgttaaaattatatctcaatgttatatt 3592896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 10584728 - 10584954
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10584728 actagactttccacccgtgctgccatatgggtcatatacattgtagatgtagtagacaaaaacaaatcttaatgcatatcaaagagaatgaaatatgtgg 10584827  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| |||| || ||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  10584828 tcccaaatatatgcagatgttggaattcgaacctcagacactacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 10584927  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||    
T  10584928 gttaaaattatatgtcaatgttatatt 10584954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 15044951 - 15044725
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  15044951 actagactttccacccgtgctgccgcacaggtcatatacattgtagatgtagtagacaaaaataaatttcaatgcatatcaaagagaataaaatatgtgg 15044852  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| ||| |||||||||||||||    
T  15044851 tcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgttttacttcattctttt 15044752  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||    
T  15044751 gttaaaattatatgtcaatgttatatt 15044725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 2005657 - 2005431
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  2005657 actagactttccactcgtgcggccgcacgggtcatatacattgtagatgcagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtgg 2005558  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    ||  |||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| ||| |||||||||||||||    
T  2005557 tcttaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattctttt 2005458  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||    
T  2005457 gttaaaattatatgtcaatgttatatt 2005431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 171 - 297
Target Start/End: Original strand, 1405562 - 1405688
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  1405562 aactagattttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagataaaaacaaatctcaatgtatattaaagagaatgaaatatgtg 1405661  T
Q  271 gtcccaaatatatgcagatgttggaat 297  Q
     ||||||||||||||||||||||||||    
T  1405662 atcccaaatatatgcagatgttggaat 1405688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 239 - 398
Target Start/End: Complemental strand, 17594979 - 17594819
Alignment:
Q  239 ctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntatt- 337  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||| ||| ||| ||||||| ||||||||||       ||||     
T  17594979 ctcaatgcatatcaaagaaaatgaaatatgtggtcccaaatatatggagatgttgaaattcaaacttcagacaccacacttattcaccttaaaaatatta 17594880  T
Q  338 aatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||    
T  17594879 aatttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatatt 17594819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 275 - 398
Target Start/End: Complemental strand, 8539726 - 8539603
Alignment:
Q  275 caaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgtt 374  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| ||||||||||||||||||||||    
T  8539726 caaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgtt 8539627  T
Q  375 aaaattatatgtcaatattatatt 398  Q
    |||||||||||||||| |||||||    
T  8539626 aaaattatatgtcaatgttatatt 8539603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 274 - 398
Target Start/End: Complemental strand, 25448876 - 25448752
Alignment:
Q  274 ccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgt 373  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||| ||||||    
T  25448876 ccaaatatatgtagatgttggaattcgaaactcagacaccacgcttattcaccaaaaatatattaatttttatcaatcgtgtgttacttcatttttttgt 25448777  T
Q  374 taaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||    
T  25448776 taaaattatatgtcaatattatatt 25448752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 33035626 - 33035527
Alignment:
Q  208 tacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctca 307  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| |||||||| |||||||||||||||| ||||||||||| ||||    
T  33035626 tacattgtagatgtagtagacaaaaacaaatctcaatgcatgtcaaagagaataaaacatgtggtctcaaatatatgcagatgctggaattcgaatctca 33035527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 8539782 - 8539723
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaa 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8539782 actagactttccacccgtgctgccgcacgggtcatatacattgtagatgtagtagacaaa 8539723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 6300709 - 6300774
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    |||||||| | |||||||||||||||||||||||||||||||||| || |||||| ||||||||||    
T  6300709 actagactatgcacccgtgctgccgcacgggtcatatacattgtatatctagtaggcaaaaacaaa 6300774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 6307519 - 6307584
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    |||||||| | |||||||||||||||||||||||||||||||||| || |||||| ||||||||||    
T  6307519 actagactatgcacccgtgctgccgcacgggtcatatacattgtatatctagtaggcaaaaacaaa 6307584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 162668 - 162710
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacatt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  162668 aactagactttccacccgtgctgccgcacgggtcatatacatt 162710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 8657073 - 8657129
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||| ||||    
T  8657073 tccacccgtgctgccgcacgggtcatatacattgtaagtgtagtagacaaaagcaaa 8657129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 14986391 - 14986433
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattg 214  Q
    |||||||||| |||||||||||| |||||||||||||||||||    
T  14986391 actagactttgcacccgtgctgctgcacgggtcatatacattg 14986433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 15432336 - 15432402
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    |||||||||||| |||||||| |||||||||||||||||||| | | || ||| || ||||||||||    
T  15432336 aactagactttctacccgtgcggccgcacgggtcatatacatcgaaaatgtagaaggcaaaaacaaa 15432402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 25342639 - 25342687
Alignment:
Q  174 tagactttccacccgtgctgccgcacgggtcatatacattgtagatata 222  Q
    |||||||| |||||||||||||||||| |||||||||| |||| |||||    
T  25342639 tagacttttcacccgtgctgccgcacgagtcatatacaatgtaaatata 25342687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 2266727 - 2266684
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  2266727 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 2266684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 10584996 - 10585039
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  10584996 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 10585039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 12597535 - 12597578
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  12597535 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 12597578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 15044682 - 15044639
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  15044682 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 15044639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 17202391 - 17202348
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  17202391 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 17202348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 17594776 - 17594733
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  17594776 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 17594733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 19997623 - 19997580
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  19997623 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 19997580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 24570763 - 24570798
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgta 216  Q
    ||||||||||||||| ||||||||||||||||||||    
T  24570763 tccacccgtgctgccacacgggtcatatacattgta 24570798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 28099868 - 28099911
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  28099868 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 28099911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 33289079 - 33289114
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgta 216  Q
    ||||||||||||||||||||||||||||| ||||||    
T  33289079 tccacccgtgctgccgcacgggtcatatagattgta 33289114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 33645901 - 33645858
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  33645901 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 33645858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 2965459 - 2965509
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatata 222  Q
    |||||||||  ||||||||||||||||||||||||| ||| |||| |||||    
T  2965459 actagacttatcacccgtgctgccgcacgggtcataaacaatgtaaatata 2965509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 24165091 - 24165132
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacatt 213  Q
    |||||||||  ||||||||||| |||||||||||||||||||    
T  24165091 actagacttatcacccgtgctgacgcacgggtcatatacatt 24165132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 30143049 - 30142984
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    |||||||||| |||||||| ||||||||| | |||||| | |||| | ||||||||||||| ||||    
T  30143049 actagactttacacccgtgttgccgcacgagacatatataatgtaaaaatagtagacaaaagcaaa 30142984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 2737178 - 2737142
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatat 208  Q
    |||||||  ||||||||||||||||||||||||||||    
T  2737178 actagaccatccacccgtgctgccgcacgggtcatat 2737142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 171 - 398
Target Start/End: Original strand, 34888685 - 34888912
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34888685 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 34888784  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  34888785 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttt 34888884  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||||||||||    
T  34888885 tgttaaaattatatgtcaatattatatt 34888912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 4266610 - 4266384
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4266610 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 4266511  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  4266510 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 4266411  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  4266410 gttaaaattatatgtcaatattatatt 4266384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 38913747 - 38913973
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38913747 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 38913846  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  38913847 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 38913946  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  38913947 gttaaaattatatgtcaatattatatt 38913973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 2951366 - 2951592
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| |||||||||||||||||||||||||||||||||||||    
T  2951366 actagactttccacccgtgctgccgcacgggtcatatacattgtaaatataataaacaaaaaaaaatctcaatgcatatcaaagagaatgaaatatgtgg 2951465  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  2951466 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 2951565  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||    
T  2951566 gttaaaattatatgtcaatattatatt 2951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 172 - 384
Target Start/End: Complemental strand, 1232025 - 1231813
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1232025 actagactttccacccgtgctgccgcacgggtcatatacattgtaaatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 1231926  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  1231925 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattctttt 1231826  T
Q  372 gttaaaattatat 384  Q
    |||||||||||||    
T  1231825 gttaaaattatat 1231813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 171 - 398
Target Start/End: Original strand, 23482706 - 23482933
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  23482706 aactagactttccacccgtgctgccgcacgagtcatatacattgtagatgtagtagacaaatacaaatctcaatgcatatcaaagagcatgaaatatgtg 23482805  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  23482806 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacacttattcacctgaaaaatattaatttttatcaatcgtgtgttacttcattcttt 23482905  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||  |||||||    
T  23482906 tgttaaaattatatgtcaacgttatatt 23482933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 196 - 398
Target Start/End: Complemental strand, 50151265 - 50151063
Alignment:
Q  196 gcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgga 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50151265 gcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgga 50151166  T
Q  296 attcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattat 395  Q
    |||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  50151165 attcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattat 50151066  T
Q  396 att 398  Q
    |||    
T  50151065 att 50151063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 170 - 398
Target Start/End: Complemental strand, 9216262 - 9216034
Alignment:
Q  170 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgt 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||    
T  9216262 taactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagataaaaacaaatctcaatgcatatcaaagagaataaaacatgt 9216163  T
Q  270 ggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctt 369  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||       |||||||||||||||||| ||| |||||||||||||    
T  9216162 ggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttatttaccttaaaaatattaatttttatcaatcgtgtcttacttcattctt 9216063  T
Q  370 ttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||||| |||||||    
T  9216062 ttgttaaaattatatgtcaatgttatatt 9216034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 166 - 398
Target Start/End: Complemental strand, 38444866 - 38444634
Alignment:
Q  166 ataataactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaat 265  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38444866 ataattactagactttccacccgtgatgccgcatgggtcatatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaat 38444767  T
Q  266 atgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcat 365  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||||||       ||||||||||||||||| ||||||||||||||    
T  38444766 atgtggtcccaaatatatgcagatgttgaaattcgaacttcagacaccacacttattcaccttaaaaatattaatttttatcaataatgtgttacttcat 38444667  T
Q  366 tcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||| ||||||||||||||||| |||||||    
T  38444666 tcttttgataaaattatatgtcaatgttatatt 38444634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 18706509 - 18706734
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18706509 actagactttccacccgtgctgccgcacgagtcatatacattgtagatgtagtagacaaaaacaaatcttaatgcatatcaaagagaatgaaatatgtgg 18706608  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    | |||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||| ||||| |||||||||||||    
T  18706609 t-ccaaatatatgcagatgttggaattcgaacctcatacaccacacttattcacctgaaaaatattaatttttatcaatcgtgtgtaacttcattctttt 18706707  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||  |||||||    
T  18706708 gttaaaattatatgtcaacgttatatt 18706734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 35614291 - 35614078
Alignment:
Q  177 actttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtccca 276  Q
    |||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35614291 actttccacccgtgctaccgcacgggtcatatacattgtaaatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtccca 35614192  T
Q  277 aatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaa 376  Q
    ||||||||||||||||||||||||||| | | ||||||| ||||||||||       |||||||||||||||||| ||||||||||||||||||||||||    
T  35614191 aatatatgcagatgttggaattcgaacttaagacaccacacttattcacctgaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaa 35614092  T
Q  377 aattatatgtcaat 390  Q
    ||||||||||||||    
T  35614091 aattatatgtcaat 35614078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 171 - 398
Target Start/End: Complemental strand, 7334174 - 7333947
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    ||||||||||| |||||||||||| |||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7334174 aactagacttttcacccgtgctgctgcacgggttatatagatggtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaatatgtg 7334075  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||       |||||||||||||||||| ||||||||||||||||||    
T  7334074 gtcccaaatatatgcagatgttggaattcaaacctcagacaccacacttattcaccataaaaatattaatttttatcaatcgtgtgttacttcattcttt 7333975  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||| |||||||    
T  7333974 tgttaaaattatatgtcaatgttatatt 7333947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 171 - 398
Target Start/End: Original strand, 18855232 - 18855458
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||||||| ||| |||||    
T  18855232 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatgcagtagacaaat-caaatctcaatgcatatcaaagagaataaaacatgtg 18855330  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||| ||||||||||       |||||||||||||||||||||| ||||||||||||||    
T  18855331 gtcccaaatatatgtagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcatgtattacttcattcttt 18855430  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||| |||||||    
T  18855431 tgttaaaattatatgtcaatgttatatt 18855458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 52687114 - 52687339
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  52687114 actagactttccacccgtgctgtcgcacgggtcatatacattgtagatgtagtatacaaaaacaaatctcaatgcctatgaaagagaatgaaatatgtgg 52687213  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||       |||||||||||||||||| |||||||||||||| ||||    
T  52687214 tcccaaatatatgcagatgttggaatccgaacctca-acaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattttttt 52687312  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
     |||||||||||||||||| |||||||    
T  52687313 attaaaattatatgtcaatgttatatt 52687339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 172 - 326
Target Start/End: Original strand, 31018200 - 31018354
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31018200 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 31018299  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcacc 326  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31018300 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcacc 31018354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 174 - 326
Target Start/End: Complemental strand, 50326228 - 50326076
Alignment:
Q  174 tagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50326228 tagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtc 50326129  T
Q  274 ccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcacc 326  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50326128 ccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcacc 50326076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 212 - 398
Target Start/End: Complemental strand, 39728169 - 39727983
Alignment:
Q  212 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcataca 311  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  39728169 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 39728070  T
Q  312 ccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    |||| ||||||||||       |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||    
T  39728069 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatatt 39727983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 211 - 390
Target Start/End: Complemental strand, 35615005 - 35614827
Alignment:
Q  211 attgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatac 310  Q
    |||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  35615005 attgtaaatgtagtagacaaaaacaaatcttaatgcatatcaaagagaatgaaatatgtggtctcaaatatatgcagatgttggaattcgaacctcagac 35614906  T
Q  311 accacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaat 390  Q
    ||||| |||||| |||       |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35614905 accacacttatttacc-ttaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaat 35614827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 215 - 390
Target Start/End: Original strand, 19764593 - 19764768
Alignment:
Q  215 tagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacacca 314  Q
    ||||| ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  19764593 tagatgtagtatacaaaaacaaatctcaatgcatattaaaaagaatgaaatatgtggtcccaaatatatgcaaatgtttgaattcgaacctcagacacca 19764692  T
Q  315 cgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaat 390  Q
    | ||||||||||       ||||||||||||| |||| |||||||||||||| |||||||||||||| ||||||||    
T  19764693 cacttattcaccttaaaaatattaatttttatgaatcgtgtgttacttcattattttgttaaaattacatgtcaat 19764768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 172 - 266
Target Start/End: Complemental strand, 29942247 - 29942153
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaata 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29942247 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaata 29942153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 205 - 289
Target Start/End: Complemental strand, 5061419 - 5061335
Alignment:
Q  205 atatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagat 289  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5061419 atatacattgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagat 5061335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 398
Target Start/End: Complemental strand, 2590468 - 2590338
Alignment:
Q  267 tgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcatt 366  Q
    |||||| ||||||||||||||||||| |||||| ||||||| ||||||| ||||||||||       |||||||||||||||||| ||| ||||||||||    
T  2590468 tgtggttccaaatatatgcagatgttcgaattc-aacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcatt 2590370  T
Q  367 cttttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||| |||||||    
T  2590369 cttttgttaaaattatatgtcaatgttatatt 2590338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 263 - 398
Target Start/End: Complemental strand, 19768602 - 19768467
Alignment:
Q  263 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttactt 362  Q
    |||||||||| ||||||| ||| |||||||| | ||||||||||| ||||||| |||||||| |       ||||| |||||||||||| ||||||||||    
T  19768602 aatatgtggttccaaatacatgtagatgttgaatttcgaacctcagacaccacacttattcatcttaaaaatattattttttatcaatcgtgtgttactt 19768503  T
Q  363 cattcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||||||||||| |||||||    
T  19768502 cattcttttgttaaaattatatgtcaatgttatatt 19768467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 52957105 - 52957058
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagat 219  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  52957105 actagactctccacccgtgctgccgcacgggtcatatacattgtagat 52957058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 2590510 - 2590466
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgt 215  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  2590510 aactagactttccacccgtgctgccgcacgagtcatatacattgt 2590466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 29387896 - 29387952
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    ||||||||| ||||||||||||||||||||||||||  | |||||||||||||||||    
T  29387896 tccacccgtactgccgcacgggtcatatacattgtaagtgtagtagacaaaaacaaa 29387952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 28947463 - 28947519
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    ||||||||||||||||||||||||||||||||| ||  | |||||||||||| ||||    
T  28947463 tccacccgtgctgccgcacgggtcatatacattataagtgtagtagacaaaagcaaa 28947519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 26497688 - 26497649
Alignment:
Q  169 ataactagactttccacccgtgctgccgcacgggtcatat 208  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  26497688 ataactagactttgcacccgtgctgccgcacgggtcatat 26497649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 14009895 - 14009849
Alignment:
Q  187 cgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaa 233  Q
    ||||||||||||||||||||||| |||||| || |||||||||||||    
T  14009895 cgtgctgccgcacgggtcatataaattgtaaatgtagtagacaaaaa 14009849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 36465920 - 36465864
Alignment:
Q  176 gactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaa 232  Q
    |||||| ||||||||||||||||| ||||||||||  |||| ||||||| |||||||    
T  36465920 gacttttcacccgtgctgccgcacaggtcatatacggtgtaaatatagttgacaaaa 36465864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 1231768 - 1231725
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  1231768 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 1231725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 2951636 - 2951679
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  2951636 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 2951679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 4266340 - 4266297
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  4266340 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 4266297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 18706773 - 18706816
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  18706773 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 18706816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 19764814 - 19764857
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  19764814 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 19764857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 19768425 - 19768382
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  19768425 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 19768382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 23482972 - 23483015
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  23482972 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 23483015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 35614027 - 35613984
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  35614027 tgttacttcattcttttgtaaaaattatatgttaattttatatt 35613984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 35614777 - 35614734
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  35614777 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 35614734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 38914017 - 38914060
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  38914017 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 38914060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 52036310 - 52036353
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  52036310 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 52036353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 4325453 - 4325490
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatat 208  Q
    |||||||| || ||||||||||||||||||||||||||    
T  4325453 aactagaccttgcacccgtgctgccgcacgggtcatat 4325490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 7333903 - 7333863
Alignment:
Q  358 tacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||| |||||||||||| ||| |||||||    
T  7333903 tacttcattcttttgtaaaaattatatgttaatgttatatt 7333863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 174; Significance: 2e-93; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 149050 - 149276
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  149050 actagactttccacccgtgctgccgcacgggtcatataaattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 149149  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattctttt 371  Q
    |||||||||||||||||||||||||||||||| ||| |||| || ||||||||||       |||||||||||||||||| |||||||||||||||||||    
T  149150 tcccaaatatatgcagatgttggaattcgaacatcaaacacaacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattctttt 149249  T
Q  372 gttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||  |||||||    
T  149250 gttaaaattatatgtcaacgttatatt 149276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 149318 - 149361
Alignment:
Q  355 tgttacttcattcttttgttaaaattatatgtcaatattatatt 398  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  149318 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 149361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 163; Significance: 6e-87; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 171 - 398
Target Start/End: Complemental strand, 19577 - 19350
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtg 270  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||| ||| |||||||||    
T  19577 aactagactttccacccgtgctgccgtacgggtcctatacattgtagatgtagtagacaaaaacaaatctcaatgcatattaaagataattaaatatgtg 19478  T
Q  271 gtcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattcaccnnnnnnntattaatttttatcaatcatgtgttacttcattcttt 370  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||| ||| ||||||||||||||    
T  19477 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttt 19378  T
Q  371 tgttaaaattatatgtcaatattatatt 398  Q
    |||||||||||||||||||| |||||||    
T  19377 tgttaaaattatatgtcaatgttatatt 19350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 141; Significance: 8e-74; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 172 - 324
Target Start/End: Original strand, 5278 - 5430
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5278 actagactttccacccgtgctgccgcacgggacatatacattgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 5377  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattca 324  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5378 tcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattca 5430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 172 - 324
Target Start/End: Original strand, 6061 - 6213
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6061 actagattttccacccgtgctgccgcacgggtcatatacattgtagatgttgtagacaaaaacatatctcaatgcatatcaaagagaatgaaatatgtgg 6160  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattca 324  Q
    || ||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  6161 tctcaaatatatgcagatgttggaattcgaacctcaaacaccacacttattca 6213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 172 - 324
Target Start/End: Original strand, 6071 - 6223
Alignment:
Q  172 actagactttccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgg 271  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6071 actagattttccacccgtgctgccgcacgggtcatatacattgtagatgttgtagacaaaaacatatctcaatgcatatcaaagagaatgaaatatgtgg 6170  T
Q  272 tcccaaatatatgcagatgttggaattcgaacctcatacaccacgcttattca 324  Q
    || ||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  6171 tctcaaatatatgcagatgttggaattcgaacctcaaacaccacacttattca 6223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 1137 - 1081
Alignment:
Q  181 tccacccgtgctgccgcacgggtcatatacattgtagatatagtagacaaaaacaaa 237  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||| ||||    
T  1137 tccacccgtgctgccgcacgggtcatatacattgtaagtgtagtagacaaaagcaaa 1081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 14764 - 14730
Alignment:
Q  180 ttccacccgtgctgccgcacgggtcatatacattg 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  14764 ttccacccgtgttgccgcacgggtcatatacattg 14730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1234 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1234
Description:

Target: scaffold1234; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 1084 - 1047
Alignment:
Q  171 aactagactttccacccgtgctgccgcacgggtcatat 208  Q
    |||||||| || ||||||||||||||||||||||||||    
T  1084 aactagaccttgcacccgtgctgccgcacgggtcatat 1047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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