View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7747_high_11 (Length: 259)
Name: NF7747_high_11
Description: NF7747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7747_high_11 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 8 - 259
Target Start/End: Original strand, 11758473 - 11758724
Alignment:
| Q |
8 |
agattattctccgtcgcagttcattgattctggtagcgagttttcacaaggatccgttggtgaaactccttctcatacttattcgttgcttcttcgatac |
107 |
Q |
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| T |
11758473 |
agattattctccgtcgcagttcattgattctggtagcgagttttcacaaggatccgttggtgaaactccttctcatacttattcgttgcttcttcgatac |
11758572 |
T |
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| Q |
108 |
cgcgacgaattcgcgaagctaggttctccggttaaagctacttcaattgttgtagaagatttttctcttcataacaatgtacgttttgtttcatcaattt |
207 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11758573 |
cgcgacgaattcgcaaagctaggttctccggttaaagctacttcaattgttgtagaagatttttctcttcataacaatgtacgttttgtttcatcaattt |
11758672 |
T |
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| Q |
208 |
cttagttcaaaatgttaataatatgctaattattctagtttaacttttattt |
259 |
Q |
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| T |
11758673 |
cttagttcaaaatgttaataatatgctaattattctagtttaacttttattt |
11758724 |
T |
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