View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7747_high_12 (Length: 246)
Name: NF7747_high_12
Description: NF7747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7747_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 41029178 - 41029395
Alignment:
| Q |
20 |
agagcagaagtgggagtgaaaggaagctaccctatgcacacacattatgttgccacagattttttgatcatggtggtagctgagcttacagatggcttgg |
119 |
Q |
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| T |
41029178 |
agagcagaagtgggagtgaaaggaagctaccctatgcacacacattatgttgccgcagattttttgatcatggtggtagctgagctgacagatgggttgg |
41029277 |
T |
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| Q |
120 |
tgataaatgaagaagtgtttcaaaaaactattagaggtggagatgtattgtgtttcctaaaggacacatgcatttccttgtcaattttggtgccagaata |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41029278 |
tgataaatgaagaagtgtttcaaaaaactattagaggtggagatgtattgtgtttcctaaaggacacatgcatttccttgtcaattttggtgccagaata |
41029377 |
T |
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| Q |
220 |
gcggttgctttttcatct |
237 |
Q |
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|||||||||||||||||| |
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| T |
41029378 |
gcggttgctttttcatct |
41029395 |
T |
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