View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7748_high_3 (Length: 272)
Name: NF7748_high_3
Description: NF7748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7748_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 11 - 256
Target Start/End: Complemental strand, 33743028 - 33742783
Alignment:
| Q |
11 |
aagaatatatgtccacaaaaagtaaaacaatcaccaaacatgcatcttagctatatttaaaaaggtgtatctatctacattcgaaatccaacattcagat |
110 |
Q |
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| T |
33743028 |
aagaaaatatgtccacaaaaagtaaaacaatcaccaaacatgcatcttagctatatttaaaaaggtgtatctatctacattcgaaatccaacattcagat |
33742929 |
T |
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| Q |
111 |
ataattctagcgatactcgaaacaatctcttgcgtcgtctcgtctctcacatctgatcttgtctctgcttcatttcctacaataataaaccaaaaatgat |
210 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
33742928 |
ataattctagcgatactcgaaacaatctcctgcgtcgtctcgtctctcacatctgatcttgtctttgcttcatttcctacaataataaaccaaaaatgat |
33742829 |
T |
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| Q |
211 |
tattaaagaatgttgtcccatttgaaactagtataaatgaaaaatg |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33742828 |
tattaaagaatgttgtcccatttgaaactagtataaatgaaaaatg |
33742783 |
T |
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