View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7748_low_1 (Length: 863)

Name: NF7748_low_1
Description: NF7748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7748_low_1
NF7748_low_1
[»] chr5 (33 HSPs)
chr5 (282-776)||(11182151-11182649)
chr5 (9-251)||(11181774-11182018)
chr5 (17-251)||(19588657-19588893)
chr5 (17-251)||(3880211-3880446)
chr5 (17-251)||(42127361-42127596)
chr5 (58-251)||(24553499-24553692)
chr5 (18-251)||(17003911-17004145)
chr5 (17-239)||(28832182-28832403)
chr5 (18-251)||(12084127-12084362)
chr5 (18-251)||(14520140-14520375)
chr5 (17-251)||(11916922-11917158)
chr5 (18-251)||(31300547-31300782)
chr5 (17-240)||(33030891-33031117)
chr5 (17-229)||(6741784-6741998)
chr5 (17-190)||(10281722-10281898)
chr5 (18-233)||(15464460-15464678)
chr5 (18-233)||(9353284-9353500)
chr5 (18-233)||(36932301-36932518)
chr5 (24-232)||(7160861-7161068)
chr5 (54-240)||(2630153-2630341)
chr5 (125-226)||(28278450-28278553)
chr5 (158-226)||(38747173-38747241)
chr5 (784-820)||(11182695-11182731)
chr5 (18-123)||(38192214-38192319)
chr5 (18-123)||(38219439-38219544)
chr5 (17-91)||(33831694-33831768)
chr5 (97-150)||(15552461-15552515)
chr5 (97-150)||(31179380-31179434)
chr5 (97-150)||(31542950-31543004)
chr5 (97-150)||(31545296-31545350)
chr5 (16-86)||(8566031-8566101)
chr5 (58-91)||(40147316-40147349)
chr5 (58-91)||(42926922-42926955)
[»] chr7 (36 HSPs)
chr7 (17-251)||(29159714-29159950)
chr7 (17-251)||(20284000-20284235)
chr7 (17-251)||(46516260-46516496)
chr7 (17-251)||(2647646-2647882)
chr7 (17-251)||(33332400-33332636)
chr7 (17-251)||(4796617-4796853)
chr7 (17-251)||(23402964-23403199)
chr7 (17-251)||(55859-56094)
chr7 (17-251)||(9189958-9190194)
chr7 (17-233)||(5817221-5817438)
chr7 (9-251)||(35960727-35960971)
chr7 (19-251)||(49091573-49091806)
chr7 (17-251)||(2580298-2580536)
chr7 (17-226)||(28617176-28617386)
chr7 (17-232)||(3047186-3047401)
chr7 (17-247)||(21983198-21983432)
chr7 (80-251)||(9185178-9185349)
chr7 (20-233)||(2479266-2479479)
chr7 (158-251)||(9235648-9235741)
chr7 (65-247)||(21988822-21989006)
chr7 (18-233)||(44848636-44848852)
chr7 (86-233)||(47263607-47263754)
chr7 (125-217)||(22270107-22270201)
chr7 (65-233)||(18413570-18413737)
chr7 (17-80)||(9235533-9235596)
chr7 (18-141)||(21646028-21646152)
chr7 (16-82)||(24525985-24526052)
chr7 (129-191)||(30814574-30814637)
chr7 (16-91)||(2361052-2361127)
chr7 (18-123)||(21639849-21639954)
chr7 (16-91)||(29608750-29608825)
chr7 (97-150)||(31155920-31155974)
chr7 (16-91)||(38671302-38671377)
chr7 (16-91)||(48599414-48599489)
chr7 (58-91)||(8153397-8153430)
chr7 (17-91)||(23565141-23565216)
[»] chr6 (27 HSPs)
chr6 (17-251)||(10077115-10077351)
chr6 (17-251)||(4629864-4630101)
chr6 (17-251)||(31979424-31979660)
chr6 (57-251)||(22963611-22963806)
chr6 (57-251)||(23824587-23824782)
chr6 (17-251)||(18232756-18232992)
chr6 (17-240)||(24435921-24436143)
chr6 (17-206)||(5572191-5572382)
chr6 (17-251)||(5017430-5017654)
chr6 (17-247)||(21801294-21801531)
chr6 (17-195)||(31086423-31086603)
chr6 (80-251)||(31936498-31936671)
chr6 (18-233)||(5757430-5757646)
chr6 (17-240)||(31076892-31077116)
chr6 (18-233)||(21355965-21356182)
chr6 (17-149)||(14521688-14521819)
chr6 (80-210)||(27165635-27165767)
chr6 (80-251)||(22708930-22709102)
chr6 (17-122)||(1115055-1115159)
chr6 (206-251)||(5572737-5572782)
chr6 (16-91)||(2973019-2973094)
chr6 (16-91)||(5043640-5043715)
chr6 (97-150)||(12195524-12195578)
chr6 (16-75)||(16569046-16569106)
chr6 (16-86)||(17763003-17763073)
chr6 (97-150)||(26065233-26065286)
chr6 (97-150)||(26085202-26085255)
[»] chr3 (56 HSPs)
chr3 (17-251)||(40844563-40844798)
chr3 (17-253)||(18552823-18553061)
chr3 (17-251)||(3328297-3328532)
chr3 (17-251)||(40592722-40592959)
chr3 (17-239)||(37466214-37466437)
chr3 (17-251)||(3715942-3716178)
chr3 (17-251)||(26298899-26299135)
chr3 (17-251)||(48438125-48438361)
chr3 (17-251)||(24695104-24695339)
chr3 (18-251)||(8370428-8370663)
chr3 (17-240)||(1417431-1417655)
chr3 (17-220)||(1736245-1736450)
chr3 (18-231)||(21711154-21711368)
chr3 (17-240)||(25795702-25795928)
chr3 (69-251)||(25929435-25929618)
chr3 (20-251)||(30709733-30709967)
chr3 (18-251)||(6794654-6794889)
chr3 (17-231)||(4386868-4387084)
chr3 (17-195)||(36029060-36029240)
chr3 (18-238)||(16264273-16264495)
chr3 (18-251)||(35925393-35925625)
chr3 (18-233)||(27974893-27975110)
chr3 (17-175)||(47923845-47924006)
chr3 (19-142)||(3323633-3323756)
chr3 (80-233)||(27986449-27986604)
chr3 (80-233)||(33386669-33386825)
chr3 (80-233)||(39039995-39040151)
chr3 (18-233)||(32143250-32143467)
chr3 (17-110)||(8126684-8126777)
chr3 (17-122)||(21353604-21353708)
chr3 (125-226)||(34491346-34491449)
chr3 (181-251)||(8126612-8126682)
chr3 (18-232)||(26928541-26928757)
chr3 (65-206)||(27452914-27453056)
chr3 (181-251)||(27026856-27026925)
chr3 (69-109)||(25929365-25929405)
chr3 (181-251)||(27038201-27038270)
chr3 (55-91)||(32744516-32744552)
chr3 (17-77)||(47649656-47649716)
chr3 (16-91)||(760860-760935)
chr3 (65-233)||(1305878-1306046)
chr3 (197-251)||(1417176-1417230)
chr3 (16-91)||(22835082-22835157)
chr3 (16-91)||(32891116-32891192)
chr3 (16-91)||(39153441-39153516)
chr3 (24-150)||(29100172-29100299)
chr3 (97-150)||(746953-747007)
chr3 (54-104)||(5366301-5366351)
chr3 (97-150)||(6063453-6063507)
chr3 (16-91)||(46860487-46860562)
chr3 (97-150)||(50494195-50494249)
chr3 (58-91)||(4570007-4570040)
chr3 (16-86)||(34491225-34491295)
chr3 (210-251)||(47924007-47924048)
chr3 (58-91)||(51398869-51398902)
chr3 (58-87)||(53921587-53921616)
[»] chr1 (44 HSPs)
chr1 (15-251)||(47098773-47099010)
chr1 (17-247)||(19072842-19073075)
chr1 (17-247)||(19120732-19120965)
chr1 (17-251)||(16124466-16124703)
chr1 (17-251)||(13598309-13598545)
chr1 (17-251)||(29651722-29651958)
chr1 (17-251)||(47703886-47704122)
chr1 (57-251)||(27104362-27104558)
chr1 (25-251)||(47102800-47103027)
chr1 (17-251)||(9476173-9476408)
chr1 (79-251)||(775583-775757)
chr1 (17-251)||(32889349-32889586)
chr1 (18-233)||(26644849-26645066)
chr1 (17-233)||(17345470-17345687)
chr1 (18-232)||(3281637-3281853)
chr1 (17-174)||(22819416-22819575)
chr1 (21-250)||(9023794-9024017)
chr1 (18-231)||(37069700-37069912)
chr1 (22-231)||(21536525-21536736)
chr1 (18-229)||(13604574-13604788)
chr1 (130-233)||(50521165-50521271)
chr1 (177-251)||(40816844-40816918)
chr1 (18-97)||(40816765-40816844)
chr1 (16-91)||(8550867-8550942)
chr1 (97-150)||(47179929-47179982)
chr1 (18-123)||(19358794-19358899)
chr1 (65-233)||(19361431-19361600)
chr1 (65-233)||(19380071-19380240)
chr1 (18-123)||(24202720-24202825)
chr1 (97-150)||(47177578-47177631)
chr1 (57-118)||(48382471-48382532)
chr1 (45-153)||(35109515-35109623)
chr1 (55-91)||(40122278-40122314)
chr1 (97-150)||(9459428-9459482)
chr1 (97-150)||(9463255-9463309)
chr1 (97-150)||(16226383-16226437)
chr1 (97-150)||(16231779-16231833)
chr1 (58-91)||(193666-193699)
chr1 (97-153)||(2617732-2617789)
chr1 (58-91)||(10925278-10925311)
chr1 (121-150)||(13137985-13138014)
chr1 (17-153)||(32736947-32737083)
chr1 (58-91)||(42298055-42298088)
chr1 (58-91)||(50169290-50169323)
[»] chr4 (51 HSPs)
chr4 (17-238)||(10047303-10047526)
chr4 (17-240)||(6743366-6743590)
chr4 (17-251)||(54867095-54867330)
chr4 (64-251)||(39245905-39246094)
chr4 (17-238)||(42599523-42599747)
chr4 (17-252)||(38152389-38152625)
chr4 (17-251)||(25861983-25862208)
chr4 (17-247)||(3796469-3796702)
chr4 (18-217)||(36315181-36315381)
chr4 (18-217)||(36329390-36329590)
chr4 (17-251)||(24333723-24333957)
chr4 (17-249)||(5147590-5147824)
chr4 (7-174)||(39774245-39774414)
chr4 (66-250)||(34495822-34496007)
chr4 (17-251)||(3777461-3777695)
chr4 (17-251)||(5143170-5143406)
chr4 (19-238)||(5269154-5269364)
chr4 (9-174)||(18377348-18377514)
chr4 (18-233)||(5396623-5396840)
chr4 (17-195)||(16623243-16623424)
chr4 (30-251)||(16630643-16630866)
chr4 (17-174)||(5112226-5112383)
chr4 (18-233)||(31985585-31985801)
chr4 (15-240)||(1983249-1983473)
chr4 (80-228)||(8689498-8689647)
chr4 (16-91)||(31474163-31474239)
chr4 (17-109)||(37781917-37782008)
chr4 (80-233)||(28468542-28468696)
chr4 (97-150)||(18709173-18709227)
chr4 (97-150)||(18847423-18847476)
chr4 (97-150)||(22134627-22134680)
chr4 (200-251)||(16624144-16624195)
chr4 (178-217)||(21688436-21688475)
chr4 (16-91)||(379393-379468)
chr4 (16-91)||(8665421-8665496)
chr4 (16-91)||(12073405-12073480)
chr4 (97-150)||(16931798-16931852)
chr4 (97-150)||(16934152-16934206)
chr4 (97-150)||(22780382-22780436)
chr4 (97-150)||(22782747-22782801)
chr4 (97-150)||(44599847-44599901)
chr4 (16-91)||(52467434-52467509)
chr4 (17-91)||(5871834-5871908)
chr4 (58-91)||(6656011-6656044)
chr4 (58-91)||(24969167-24969200)
chr4 (58-91)||(26364291-26364324)
chr4 (58-91)||(35662496-35662529)
chr4 (16-86)||(45687267-45687338)
chr4 (58-91)||(46147471-46147504)
chr4 (58-91)||(48893718-48893751)
chr4 (58-91)||(50673927-50673960)
[»] chr2 (43 HSPs)
chr2 (17-251)||(31055953-31056191)
chr2 (17-251)||(33118047-33118283)
chr2 (17-251)||(10445394-10445630)
chr2 (17-238)||(20522144-20522367)
chr2 (17-251)||(39482842-39483078)
chr2 (17-251)||(33528576-33528807)
chr2 (17-251)||(17865114-17865350)
chr2 (17-251)||(34682284-34682520)
chr2 (17-251)||(8039971-8040209)
chr2 (17-246)||(2869643-2869875)
chr2 (17-251)||(21629860-21630090)
chr2 (17-247)||(8390100-8390331)
chr2 (17-247)||(14698958-14699176)
chr2 (22-238)||(13569253-13569470)
chr2 (51-251)||(16940193-16940395)
chr2 (51-251)||(17010858-17011060)
chr2 (20-238)||(10707205-10707424)
chr2 (9-250)||(40014839-40015080)
chr2 (17-251)||(34388770-34388997)
chr2 (18-251)||(23078422-23078657)
chr2 (18-233)||(28259129-28259345)
chr2 (17-235)||(42039619-42039840)
chr2 (61-150)||(2838024-2838114)
chr2 (17-174)||(15903841-15903997)
chr2 (18-233)||(36757714-36757931)
chr2 (53-240)||(35397433-35397622)
chr2 (60-174)||(1345533-1345652)
chr2 (35-174)||(27149263-27149402)
chr2 (80-233)||(40738773-40738926)
chr2 (18-141)||(25398517-25398641)
chr2 (18-141)||(25403655-25403779)
chr2 (18-123)||(3491791-3491896)
chr2 (16-91)||(11151671-11151746)
chr2 (16-91)||(11690514-11690589)
chr2 (18-123)||(25407663-25407768)
chr2 (16-91)||(42362365-42362440)
chr2 (97-150)||(35215595-35215649)
chr2 (97-150)||(35217972-35218026)
chr2 (21-91)||(723824-723894)
chr2 (17-91)||(14633906-14633980)
chr2 (17-74)||(28770725-28770781)
chr2 (58-91)||(36773617-36773650)
chr2 (97-150)||(42452973-42453026)
[»] scaffold0148 (1 HSPs)
scaffold0148 (25-251)||(10640-10868)
[»] scaffold0006 (3 HSPs)
scaffold0006 (17-251)||(5594-5830)
scaffold0006 (17-251)||(2403-2639)
scaffold0006 (18-229)||(133231-133445)
[»] chr8 (29 HSPs)
chr8 (17-251)||(26403180-26403416)
chr8 (17-251)||(23799527-23799763)
chr8 (17-251)||(19752344-19752580)
chr8 (17-240)||(6127142-6127368)
chr8 (17-251)||(5702433-5702669)
chr8 (17-251)||(4696557-4696782)
chr8 (17-233)||(6813611-6813830)
chr8 (97-251)||(9765849-9766006)
chr8 (18-233)||(4455956-4456173)
chr8 (17-223)||(9054788-9054995)
chr8 (18-233)||(7412269-7412486)
chr8 (18-240)||(28307484-28307707)
chr8 (17-184)||(3051097-3051266)
chr8 (65-233)||(19175753-19175923)
chr8 (18-233)||(31071180-31071398)
chr8 (45-246)||(5990539-5990742)
chr8 (16-91)||(30291619-30291695)
chr8 (23-106)||(7493130-7493212)
chr8 (8-91)||(4162502-4162585)
chr8 (65-141)||(1261953-1262029)
chr8 (15-91)||(18141833-18141908)
chr8 (16-91)||(1292543-1292618)
chr8 (16-91)||(3303750-3303825)
chr8 (55-85)||(3772244-3772274)
chr8 (97-150)||(43079874-43079928)
chr8 (97-150)||(43082245-43082299)
chr8 (58-91)||(10015136-10015169)
chr8 (58-91)||(11384040-11384073)
chr8 (97-150)||(28283230-28283283)
[»] scaffold0176 (2 HSPs)
scaffold0176 (17-251)||(17174-17410)
scaffold0176 (58-91)||(18083-18116)
[»] scaffold0036 (1 HSPs)
scaffold0036 (17-252)||(85594-85829)
[»] scaffold0087 (2 HSPs)
scaffold0087 (18-233)||(43913-44129)
scaffold0087 (18-232)||(36784-37000)
[»] scaffold0140 (1 HSPs)
scaffold0140 (24-233)||(8376-8588)
[»] scaffold0078 (2 HSPs)
scaffold0078 (14-236)||(23455-23681)
scaffold0078 (80-143)||(43274-43338)
[»] scaffold0098 (1 HSPs)
scaffold0098 (88-233)||(45182-45329)
[»] scaffold0184 (1 HSPs)
scaffold0184 (80-143)||(29506-29570)
[»] scaffold0016 (1 HSPs)
scaffold0016 (17-89)||(102445-102516)
[»] scaffold0267 (1 HSPs)
scaffold0267 (97-150)||(266-320)
[»] scaffold0188 (2 HSPs)
scaffold0188 (65-123)||(17951-18008)
scaffold0188 (65-123)||(24044-24101)
[»] scaffold0472 (1 HSPs)
scaffold0472 (97-153)||(6424-6481)
[»] scaffold0286 (1 HSPs)
scaffold0286 (58-91)||(11612-11645)
[»] scaffold0219 (1 HSPs)
scaffold0219 (58-91)||(27523-27556)


Alignment Details
Target: chr5 (Bit Score: 403; Significance: 0; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 282 - 776
Target Start/End: Original strand, 11182151 - 11182649
Alignment:
Q  282 gtgaatatcgtgagaatcctaatttttattttgtggatttttggaagcgagtacagaaaatgaaaatgcaagtatagaaaaatttaaatctaagacttgt 381  Q
    ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11182151 gtgaaaattgtgagaaccctaatttttattttgtggatttttggaagcgagtacagaaaatgaaaatgcaagtatagaaaaatttaaatc-aagacttgt 11182249  T
Q  382 tgcacaaggcttcaatcatacagaaggattgaactactttgagagattcccacttaatgcaaagtaatccatagtgagagctgttcttttggccctagct 481  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  11182250 tgcacaagggttcaatcatacagaaggattgaactactttgagagattcccacttaatgcaaagttatccatagtaagaactgttcttttggccctagct 11182349  T
Q  482 tctctacatggttgccatttacatgaggcacgatatacatgaagatgcctcaatgggtctctactcctaaactaagtcaggtatgcaaacttcttaagtc 581  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  11182350 tctctacatggttgccatttacatgaggcacgatatacatgaagaagcctcaatggg--tctactcctaaactaagtcaggtatgcaaacttcttaagtc 11182447  T
Q  582 attatatggtctttaagcaagcaagtcaccattggtttaaagaattgactaatttc--ctatttgctcatagatttgtgcaatcacattctgatcgcacc 679  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||    
T  11182448 attatatggtctttaagcaagcaagtcgccattggtttaaagaattgactaatttcgtatatttgctcatggatttgtgcaatcacattctgatcgcacc 11182547  T
Q  680 ctaggatacaatattggtaggaa---cttcact--caaagtttgatgaattgaaagcagctttggataaaactttccatattaagaatataggtaaacta 774  Q
    |||||||||||||||||||||||   |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11182548 ctaggatacaatattggtaggaacttcttcactcacaaagtttgatgaattgaaagcagctttggataaaactttccatattaagaatataggtaaacta 11182647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 9 - 251
Target Start/End: Original strand, 11181774 - 11182018
Alignment:
Q  9 gtgagatgaaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattgga 108  Q
    |||| ||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11181774 gtgacatgaaaatgggtagaaattaggtcttgttcatttgagagcttttaggctaatttcttgtaactcatttgtatcactttcatcttagtggattgga 11181873  T
Q  109 ggactgctctctccc--tagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttg 206  Q
    ||  |||||||||||  |||||||||||||||| |||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  11181874 gggttgctctctccccctagagtaggtcatattagaccgaactaggttaccatcttggtgtgtttgttcatttctttcattgcttatctttattgctttg 11181973  T
Q  207 attatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||||||||||| || |||||||||||||||||||  |||||||||    
T  11181974 attatgcttgtggtattgctctacacttagatttaagtctgtttt 11182018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 19588893 - 19588657
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||| ||||||| |||||||||||||||| ||  ||||| |||| |||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  19588893 aaaaagggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 19588794  T
Q  117 ctctcccta-gagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    ||||||||| || ||| |||||||||||||||||| || | || |||| | |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19588793 ctctccctaagattagttcatattggaccgaactgggtcaacaatctttgagtgtttgttcctttctttcattgcttatctttattgctttgattatgct 19588694  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||||| ||||| ||||    
T  19588693 tgtggtgttgctctacacttagatttaggtctttttt 19588657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 3880446 - 3880211
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||| ||||||||||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  3880446 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 3880347  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||| ||| ||||||||||||||| ||||||| | | || |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  3880346 ctctgcctcagattaggtcatattggacagaactgaatcaacaatcttggtgtgtt-gttcctttctttcattgcttatctttattgctttgattatgct 3880248  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||| ||||||||||||| ||||||||||    
T  3880247 tgtggtgttgctttacacttagatttaggtctgtttt 3880211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 42127361 - 42127596
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| | |||| ||||||||||||  ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||| || |||||    
T  42127361 aaaatgggtagaaagtaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattggggggctgct 42127459  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| ||||||||||| || ||||||| || | || ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  42127460 ctctcccccagattaggtcatattagatcgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgttttgattatgct 42127559  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| ||||||||||||| ||||||||  |||||||||    
T  42127560 tgtggtgttgctctacaattagatttaagtctgtttt 42127596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 58 - 251
Target Start/End: Original strand, 24553499 - 24553692
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccc-tagagtaggtcatattggaccgaactgagttac 156  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| |||||| |||||||||||| |||| ||||||||||||||||||||||  | |     
T  24553499 aagctaatttcttgtaactcatt-gtaacactttcatcttagtggagtggagg-ctgctctctcccatagattaggtcatattggaccgaactggatcaa 24553596  T
Q  157 ca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  24553597 caatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatgcttgtggtgtttctctacacttagatttaggtctgtttt 24553692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 17003911 - 17004145
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| |||||||||||||||| ||  ||||| |||| |||||| ||||||||| |||| |  ||||||||| |||||||||| ||  ||||||    
T  17003911 aaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagttaattttttgtaactcttttgaaatactttcatcatagtggattgaagagctgctc 17004010  T
Q  118 tctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgctt 215  Q
    ||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  17004011 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatcttttttgctttgattatgctt 17004110  T
Q  216 gtagtgttgctctacacttagatttgggtctgtttt 251  Q
    || |||||||| ||||||||||||| ||||||||||    
T  17004111 gtggtgttgct-tacacttagatttaggtctgtttt 17004145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 28832403 - 28832182
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||  ||||||||||||    ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||    
T  28832403 aaaatgggtagaaattagaacttgttcttttgta--cttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctgct 28832307  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| |||||||||||||||||||| | || | || ||||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||    
T  28832306 ctctcccccagattaggtcatattggaccgaaccgggtcaacaatcttggtgtgtttgtttgtttctttcattgcttatctttattgatttgattatgct 28832207  T
Q  215 tgtagtgttgctctacacttagatt 239  Q
    ||| |||||||||||||||||||||    
T  28832206 tgtggtgttgctctacacttagatt 28832182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 12084127 - 12084362
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| |||||||||||||||| ||  |||||||||| |||||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  12084127 aaatgggtagaaattaggtcttgttcttgtgtaagcttttaagttaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 12084225  T
Q  118 tct-ccctagagtaggtcatattggaccgaactgagttacc---atcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||| ||| | | ||||||||| |||||||||||| || | |   || ||||||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  12084226 tctgccccatattaggtcatagtggaccgaactgggtcaacaatattttggtgtgtttgttcctttctttcattgcttatct-ttgtgctttgattatgc 12084324  T
Q  214 ttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||| |||||||||||||||||||| | ||||||||||    
T  12084325 ttgtggtgttgctctacacttagatctaggtctgtttt 12084362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 14520375 - 14520140
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| |||||||||||||||| ||  |||||  |||||| ||||||||||||| |||||| |||||||||| |||||||||| ||  ||||||    
T  14520375 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattgaagagctgctc 14520277  T
Q  118 t-ctccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    | | ||||||| |||||||||||||||||||||| || | ||   | ||||||||||||||||||||||||| ||||||||| |  ||||||| ||||||    
T  14520276 tcccccctagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttctttcagtgcttatct-ttgtgctttgtttatgc 14520178  T
Q  214 ttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||| |||||||||||||||||||| | ||||||||||    
T  14520177 ttgtggtgttgctctacacttagatctaggtctgtttt 14520140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 11916922 - 11917158
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  |||||  || ||| ||||||||||||| |||||| |||||||||  |||||||||||||  |||||    
T  11916922 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaaactattttcttgtaactcttttgtaacactttcattatagtggattggagagctgct 11917021  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||| | | |||||||||||||||||||||| ||  || |||| ||||||||||||||||||| ||||||||||||| ||||||  || |||||||    
T  11917022 ctctcccccatattaggtcatattggaccgaactgggtcaacaatctcggtgtgtttgttcctttctctcattgcttatctttattgcactgtttatgct 11917121  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| ||||||||||||||| |||| | ||||| ||||    
T  11917122 tgtggtgttgctctacactaagatctaggtctttttt 11917158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 31300547 - 31300782
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||||||| |||||| ||||||||| ||  |||||  || |||  ||||||| |||||| || || ||||||||||||||||||||||||   | ||    
T  31300547 aaatgggtagaaattaggacttgttcttgtgtaagcttgcaaactatttttcttgcaactca-ttataacactttcatcttagtggattggagagtttct 31300645  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||| ||| |||||||||||||||||||||| ||  || |||||||||||||||||||| ||||||||||||||||| ||||| ||||||||  ||    
T  31300646 ctctccctcagactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctctctttcattgcttatctttattgttttgattacact 31300745  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  31300746 tgtggtgttgctctacacttagatttaggtctgtttt 31300782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 33030891 - 33031117
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||| || ||||||||| | |||||||||||||||||||||||||| |  ||| |||||||||||||||||| |||||||  |||||    
T  33030891 aaaatgggtagaaattatgttttgttcttt-gtgagcttttaagctaatttcttgtaaccccattgcatcactttcatcttagtgaattggagagctgct 33030989  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagtt-accatc-ttggtgtgtttgttccttt-ctttcattgcttatctatattgctttgattatg 212  Q
    |||| ||| |||||| |||||||| ||||||||||| || || ||| ||| |||||||||||||||  |||||||| |||||| |||||||||||||||     
T  33030990 ctctcccccagagtatgtcatatttgaccgaactgaattaacaatctttgatgtgtttgttcctttattttcattggttatctttattgctttgattatt 33031089  T
Q  213 cttgtagtgttgctctacacttagattt 240  Q
    || || || |||||||||||||||||||    
T  33031090 ctcgtggtattgctctacacttagattt 33031117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 17 - 229
Target Start/End: Complemental strand, 6741998 - 6741784
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||| ||||| ||||||| ||||||||| | ||| ||  |||||||||||||||||||  |||||||||||| ||||||| ||||||||||  |||||    
T  6741998 aaaatgagtagaaattaggttttgttcttt-gtgagtttgcaagctaatttcttgtaacttctttgtatcacttccatcttaatggattggagagctgct 6741900  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagtt-accatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    || | ||| |||||| ||||||||| ||||||||| ||| |  ||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  6741899 ctatcccccagagtatgtcatattgaaccgaactgtgttaataatctttggtgtgtttgttcatttctttcattgcttatctttattgctttgattatgc 6741800  T
Q  214 ttgtagtgttgctcta 229  Q
    |||| |||||| ||||    
T  6741799 ttgtggtgttgttcta 6741784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 10281898 - 10281722
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  10281898 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 10281799  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcctttctttcattgct 190  Q
    |||| ||| |||  ||||||||||||||||||||| ||  || ||| |||||||||||||||||||||||| |||||    
T  10281798 ctctcccccagatcaggtcatattggaccgaactgggtcaacaatctttggtgtgtttgttcctttctttctttgct 10281722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 15464678 - 15464460
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||||||| |||||||||||||||| ||  |||||  |||||| ||| |||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  15464678 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgct 15464580  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 212  Q
    |||| ||| ||| ||| |||||||||||||||||| || | ||   | |||||||||||||| | |||||||||||||||||| ||||| |||| ||||     
T  15464579 ctctcccccagattagatcatattggaccgaactgggtcaacaatcttttggtgtgtttgtttc-ttctttcattgcttatctttattgttttggttata 15464481  T
Q  213 cttgtagtgttgctctacact 233  Q
    ||||| |||||||||||||||    
T  15464480 cttgtggtgttgctctacact 15464460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 9353284 - 9353500
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| ||||| |||||||||| ||  |||||  |||||  ||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  9353284 aaatgggtagaaattagatcttgttcttgtgtaagcttgcaagcttttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 9353382  T
Q  118 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||| ||| ||| |||||||||||||||||||||| || | ||   | |||||||||||||||| |||||||||||||||||| | || |||||  |||||    
T  9353383 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcc-ttctttcattgcttatctttgtt-ctttgtatatgc 9353480  T
Q  214 ttgtagtgttgctctacact 233  Q
    |||| |||||||||||||||    
T  9353481 ttgtggtgttgctctacact 9353500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 36932301 - 36932518
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||||||| |||| ||||||||||| ||  | |||  ||||||  ||||||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  36932301 aaatgggtagaaattaagtcttgttcttatgtaaacttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgct 36932399  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 212  Q
    |||| ||| ||| |||||||||||||||||||||| || | ||   | ||||||||||||||||||| ||||||||||||||| | || ||||| |||||    
T  36932400 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttccttt-tttcattgcttatctttgtt-ctttgtttatg 36932497  T
Q  213 cttgtagtgttgctctacact 233  Q
    ||||| |||||||||||||||    
T  36932498 cttgtggtgttgctctacact 36932518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 24 - 232
Target Start/End: Original strand, 7160861 - 7161068
Alignment:
Q  24 gtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-cc 122  Q
    ||||| |||| |||||||||||| | ||||||| || ||||||| ||||||| | |||||||||||||||||| ||||||||||||  ||| ||||| ||    
T  7160861 gtagaaattaagtcttgttcttt-gtgagctttaaatctaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgatctctccc 7160959  T
Q  123 ctagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttg-ttcctttctttcattgcttatctatattgctttgattatgcttgtagtg 221  Q
    ||| |||||||||||||| | | |||||  ||||||| |||||||||||| || ||||||| | || ||||| | | ||||||||||||||| ||| |||    
T  7160960 ctatagtaggtcatattgaatcaaactggattaccattttggtgtgtttgttttctttcttgc-tttcttat-tttgttgctttgattatgcctgtggtg 7161057  T
Q  222 ttgctctacac 232  Q
    ||||| |||||    
T  7161058 ttgctttacac 7161068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 54 - 240
Target Start/End: Complemental strand, 2630341 - 2630153
Alignment:
Q  54 ttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgag 152  Q
    |||||||||||||| ||||||| | ||||||||||||||||| |||||||||| ||  ||||| ||||||| | || ||||||||||||||||||||  |    
T  2630341 ttttaagctaatttattgtaacccttttgtatcactttcatcatagtggattgaagagctgctatctccctcaaagcaggtcatattggaccgaactagg 2630242  T
Q  153 tt-accatcttggtgtgtttgttcctttct-ttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagattt 240  Q
    || || || ||| || |||||||   |||| ||| || ||||||| ||||||||| | ||||||||| |||||||||| |||||||||||    
T  2630241 ttaacaatattgatgcgtttgttttattctcttcctt-cttatctctattgctttaaatatgcttgtggtgttgctctgcacttagattt 2630153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 28278450 - 28278553
Alignment:
Q  125 agagtaggtcatattggaccgaactgagttacca--tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgt 222  Q
    |||||||||||  ||||||||||||| || | ||  ||||||||||||| || |||||||||||||||||||| |||||||||||||||| |||| || |    
T  28278450 agagtaggtcaagttggaccgaactgggtgaacaattcttggtgtgtttctttctttctttcattgcttatctttattgctttgattatgattgtggttt 28278549  T
Q  223 tgct 226  Q
    ||||    
T  28278550 tgct 28278553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 38747173 - 38747241
Alignment:
Q  158 atcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgct 226  Q
    |||||||||  ||||||||||||||| ||||||||||| |||||||||||||||| |||| || |||||    
T  38747173 atcttggtggatttgttcctttctttaattgcttatctttattgctttgattatgattgtggttttgct 38747241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 784 - 820
Target Start/End: Original strand, 11182695 - 11182731
Alignment:
Q  784 ctttgaagattgatgtaatggaatactgaaagaataa 820  Q
    |||||||||||||||||||||||||||||||||||||    
T  11182695 ctttgaagattgatgtaatggaatactgaaagaataa 11182731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 38192319 - 38192214
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||||||| | |||| ||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  38192319 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 38192221  T
Q  117 ctctccc 123  Q
    |||||||    
T  38192220 ctctccc 38192214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 38219544 - 38219439
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||||||| | |||| ||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  38219544 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 38219446  T
Q  117 ctctccc 123  Q
    |||||||    
T  38219445 ctctccc 38219439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 33831694 - 33831768
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 91  Q
    |||||||||||| ||||||| ||||||||| | ||||||  |||||||||||||||||||| |||||||||| ||||    
T  33831694 aaaatgggtagaaattaggt-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatctcttt 33831768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 15552461 - 15552515
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  15552461 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 15552515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 31179434 - 31179380
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  31179434 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 31179380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 31542950 - 31543004
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  31542950 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 31543004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 31545296 - 31545350
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  31545296 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 31545350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 8566101 - 8566031
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatc 86  Q
    |||||||||||||  |||||| ||||||||| | ||||||  |||||||||||||||||||| ||||||||||    
T  8566101 gaaaatgggtagaacttaggt-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatc 8566031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 40147316 - 40147349
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  40147316 aagctaatttcttgtaactcatttgtatctcttt 40147349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 42926922 - 42926955
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  42926922 aagctaatttcttgtaactcatttgtatctcttt 42926955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 149; Significance: 3e-78; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 29159950 - 29159714
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  29159950 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 29159851  T
Q  117 ctctccc-tagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    ||||||| |||| |||||||||||||||||||||| || | || ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  29159850 ctctcccctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctctctttcattgcttatctttattgctttgattatgct 29159751  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  29159750 tgtggtgttgctctacacttagatttaggtctgtttt 29159714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 20284235 - 20284000
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||| ||||||| |||||| ||||||||||||  ||||| ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |||||    
T  20284235 aaaaagggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaacgcatt-gtaacactttcatcttagtggattggagggctgct 20284137  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  20284136 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcatttcttatctttattgctttgattatgct 20284037  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  20284036 tgtggtgttgctctacacttagatttaggtctgtttt 20284000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 46516260 - 46516496
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||| ||||||||||| ||  ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  46516260 aaaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 46516359  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||||||| |||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  46516360 ctctcccctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgtttatctctattgctttgattatgct 46516459  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    | | |||||||| |||||||||||||  |||||||||    
T  46516460 tttggtgttgctttacacttagatttaagtctgtttt 46516496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 2647646 - 2647882
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  2647646 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 2647745  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| ||||||||||||| ||||| || || | || ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2647746 ctctcccccagaataggtcatattgggccgaattgggtcaacaatcttgatgtgtttgttcctttctttcattgcttatctttattgctttgattatgct 2647845  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| ||||||||||| |||||||||| ||||||||||    
T  2647846 tgtggtgttgctctaaacttagatttaggtctgtttt 2647882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 33332400 - 33332636
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||| ||||| |||||||||||||||||||  ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||    
T  33332400 aaaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagggctgct 33332499  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||| ||| ||||||||||| || ||||||| ||  || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  33332500 ctctcccccagattaggtcatattagatcgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgatttgattatgct 33332599  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    | | |||||||||||||||||||||| ||| ||||||    
T  33332600 tatggtgttgctctacacttagatttaggtttgtttt 33332636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 4796617 - 4796853
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||| | || ||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| || ||||||| ||||||||| |||| |||||    
T  4796617 aaaatgggtataaatgaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacaatttcatcatagtggatttgagggctgct 4796716  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
     ||||||  ||| |||||||| ||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  4796717 ttctcccccagattaggtcattttggaccgaactgggttaacaatcttggtgtgtttgttcctttctctcattgcttatctttattgctttgattatgct 4796816  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  4796817 tgtggtgttgctctacacttagatttaggtctgtttt 4796853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 23402964 - 23403199
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||| ||||||||||||  ||||| |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||| |||||    
T  23402964 aaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtagattggagggctgct 23403062  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    | |||||| ||| ||||||||||| ||||||| || || | || |||| |||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  23403063 cactccctcagattaggtcatattagaccgaattgggtcaacaatcttagtgtgtttgttcctttctttcattgcttatatttattgctttgattatgct 23403162  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| ||||||||||||||||| |||| ||||||||||    
T  23403163 tgtggtgttgctctacacttacatttaggtctgtttt 23403199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 56094 - 55859
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  56094 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 55995  T
Q  117 ctctccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttccttt-ctttcattgcttatctatattgctttgattatgct 214  Q
    ||||||| ||| |||||||||||||||||||||| ||  |  |||||||||||||||||||||| ||| |||||||||||| |  |||||||||||||||    
T  55994 ctctccccagattaggtcatattggaccgaactgggtcaataatcttggtgtgtttgttcctttccttccattgcttatct-ttgtgctttgattatgct 55896  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| ||||||||||| |||||||| | ||||||||||    
T  55895 tgtggtgttgctctatacttagatctaggtctgtttt 55859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 9189958 - 9190194
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgc 115  Q
    |||||||||||| |||||| ||||||||| ||  |||||  |||||| ||| ||||||||||||| ||| ||||||||||||||||||||||||  ||||    
T  9189958 aaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgc 9190056  T
Q  116 tctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  9190057 tctctcccccagactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctctctttcattgcttatctttattgctttgtttatgc 9190156  T
Q  214 ttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||| |||||||||||||||||||| | ||| ||||||    
T  9190157 ttgtggtgttgctctacacttagatctaggtttgtttt 9190194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 17 - 233
Target Start/End: Original strand, 5817221 - 5817438
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||| |||| ||||||| ||||||||| | ||||| ||| || ||||||||||||| | |||||||||||||||| ||||||||||||||  |||||    
T  5817221 aaaatggatagaaattaggttttgttcttt-gtgagctcttatgcaaatttcttgtaacccctttgtatcactttcatattagtggattggagagctgct 5817319  T
Q  117 ctctccctagagtaggtcatattggaccgaactgagtt-accatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    ||||||| |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||| |||||||||||  |||||  |||||||||||    
T  5817320 ctctccccagagtaggtcatattggaccgaactgagttaacaatctttggtgtgtttgttcctttcttacattgcttatcattattgtgttgattatgct 5817419  T
Q  215 tgtagtgttgctctacact 233  Q
    ||| |||||| ||||||||    
T  5817420 tgtggtgttgttctacact 5817438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 9 - 251
Target Start/End: Complemental strand, 35960971 - 35960727
Alignment:
Q  9 gtgagatgaaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattgga 108  Q
    |||| ||||||||||||||| ||||||| |||||||||||  ||||| |||||||||||||| ||||||||||||| |||||||||| |||||| |||||    
T  35960971 gtgatatgaaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttctaactcatttgtaacactttcatcatagtggtttgga 35960872  T
Q  109 ggactgctctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttg 206  Q
    || ||||||||| ||| ||| |||||||||||| ||||||||  ||  || |||||||||||||||||| |||| || ||| ||||||| |||||||||     
T  35960871 gggctgctctctcccccagattaggtcatattgaaccgaactcggtcaacaatcttggtgtgtttgttcatttcattaatttcttatctttattgcttta 35960772  T
Q  207 attatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
     ||||||| || ||||| |||||||||||||||| || |||||||    
T  35960771 tttatgctggtggtgtttctctacacttagatttaggcctgtttt 35960727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 19 - 251
Target Start/End: Complemental strand, 49091806 - 49091573
Alignment:
Q  19 aatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctct 118  Q
    |||||||||| |||||||||||||||| ||  ||||| |||| |||||||||||||||| |||||| |||||||||| |||||||||||||   ||||||    
T  49091806 aatgggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaactcttttgtaacactttcatcatagtggattggagagttgctct 49091707  T
Q  119 c-tccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttg 216  Q
    | |||| ||| |||||||||||||||  ||||| ||  || ||||||||| |||||||||||||||||||||||||||| |  |||||||||||||||||    
T  49091706 cttccccagattaggtcatattggactaaactgggtcaacaatcttggtgcgtttgttcctttctttcattgcttatct-ttgtgctttgattatgcttg 49091608  T
Q  217 tagtgttgctctacacttagatttgggtctgtttt 251  Q
    | ||||||||||||||||| || | ||||||||||    
T  49091607 tggtgttgctctacacttaaatctaggtctgtttt 49091573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 2580536 - 2580298
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| | |||| ||||||||| ||  |||||  |||||| |||||||||||||||| ||| ||||||||||||||||||||||||  |||||    
T  2580536 aaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctattttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgct 2580438  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttcttt---cattgcttatctatattgctttgattat 211  Q
    |||||||  ||| ||||||||||||||||||| || || | || ||||||||||||||||||| |||||   |||||||||||| |||||||||| ||||    
T  2580437 ctctcccccagactaggtcatattggaccgaattgggtcaacaatcttggtgtgtttgttcctctcttttttcattgcttatctttattgctttggttat 2580338  T
Q  212 gcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
     ||||| ||||  |||||||||||||||| ||||||||||    
T  2580337 acttgtggtgtatctctacacttagatttaggtctgtttt 2580298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 17 - 226
Target Start/End: Original strand, 28617176 - 28617386
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||| |||||| ||||||| ||||||||| | |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||  |||||    
T  28617176 aaaataggtagaaattaggttttgttcttt-gtgagcttttaagctaatttcttgtaaccccattgtatcactttcatcttagtggattggagagctgct 28617274  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttg-ttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    |||| ||| |||||||||||||||||||||||||| ||  || || |||||||||||| || ||| ||||| |||||||||| | ||||||||| |||||    
T  28617275 ctctcccccagagtaggtcatattggaccgaactgggtaaacaatattggtgtgtttgttttcttcctttc-ttgcttatctttgttgctttgaatatgc 28617373  T
Q  214 ttgtagtgttgct 226  Q
    |||| ||||||||    
T  28617374 ttgtggtgttgct 28617386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 17 - 232
Target Start/End: Complemental strand, 3047401 - 3047186
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| ||||||||||||||||| | ||||||||||| | ||||||||||||||||||||| ||||||||| |||||||||||||  || |||    
T  3047401 aaaatgggtagaaattaggtcttgttcttt-gtgagcttttaagttgatttcttgtaactcatttgtaccactttcatattagtggattggataacggct 3047303  T
Q  117 ctct--ccctagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttg-ttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||||  ||| |||| ||||||||||||||||||||| ||||| ||||||||||||||| || ||||||| | ||  |||||| | ||| |||||||||||    
T  3047302 ctctccccccagagcaggtcatattggaccgaactgggttacgatcttggtgtgtttgttttctttcttgc-tttattatct-tgttgatttgattatgc 3047205  T
Q  214 ttgtagtgttgctctacac 232  Q
    |||| |||||||| |||||    
T  3047204 ttgtggtgttgctttacac 3047186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 21983432 - 21983198
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcattt-gtatcactttcatcttagtggattggaggactgc 115  Q
    |||||||||||| | |||||||||||||| ||  |||||  |||||| ||||||||||||| ||| ||| |||||||||| |||||||||||||  ||||    
T  21983432 aaaatgggtagaaactaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactctttttgtaacactttcatcatagtggattggagagctgc 21983333  T
Q  116 tctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttccttt-ctttcattgcttatctatattgctttgattatg 212  Q
    ||||||||  ||| |||||||||||||||||||||| || | || ||| ||||  ||||||||||| ||||| |||||||||| ||||||||||||||||    
T  21983332 tctctcccccagattaggtcatattggaccgaactgggtcaacaatctcggtgcatttgttccttttctttcgttgcttatctctattgctttgattatg 21983233  T
Q  213 cttgtagtgttgctctacacttagatttgggtctg 247  Q
     |||| ||||||||||||||  |||||| ||||||    
T  21983232 tttgtggtgttgctctacacccagatttaggtctg 21983198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 80 - 251
Target Start/End: Original strand, 9185178 - 9185349
Alignment:
Q  80 ttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcct 177  Q
    ||||| ||||||||||||||||||||||||  || |||||||||  ||| ||||| |||||||||||||||| || | || |||||||||  ||||||||    
T  9185178 ttgtaacactttcatcttagtggattggagagcttctctctcccccagactaggttatattggaccgaactgggtcaacaatcttggtgt--ttgttcct 9185275  T
Q  178 ttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
     ||||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||||||    
T  9185276 ctctttcattgcttatctttattgctttgtttatgcttgtggtgtttctctacacttagatctaggtctgtttt 9185349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 20 - 233
Target Start/End: Complemental strand, 2479479 - 2479266
Alignment:
Q  20 atgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctc 119  Q
    ||||||||| |||||||||||||||| ||  |||||  |||||| |||||| |||||| |||||| |||||||||| ||||||||| |||  ||||||||    
T  2479479 atgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttataactc-tttgtaacactttcatcatagtggatttgagagctgctctc 2479381  T
Q  120 tccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttg 216  Q
     ||||||| |||||||||||| ||||||||| || | ||   | |||||||||||||| | |||||||||||||||||| | || |||||  ||||||||    
T  2479380 cccctagattaggtcatattgaaccgaactgggtcaacaatcttttggtgtgtttgtttc-ttctttcattgcttatctttgtt-ctttgtatatgcttg 2479283  T
Q  217 tagtgttgctctacact 233  Q
    | |||||||||||||||    
T  2479282 tggtgttgctctacact 2479266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 9235648 - 9235741
Alignment:
Q  158 atcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  9235648 atcttggtgtgtttgttcatttctttcattgcttatctttattgctttgattatgcttgtggtgttgctctacatttagatttaggtctgtttt 9235741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 65 - 247
Target Start/End: Complemental strand, 21989006 - 21988822
Alignment:
Q  65 tttcttgtaactcattt-gtatcactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggaccgaactgagttacca-tctt 162  Q
    ||||||||||||| ||| ||| ||||||||||  ||||||||||||   |||||||  || ||| |||||||||||||||||||||| || | || |||     
T  21989006 tttcttgtaactctttttgtaacactttcatcaaagtggattggagagttgctctcctcc-agattaggtcatattggaccgaactgggtcaacaatctc 21988908  T
Q  163 ggtgtgtttgttccttt-ctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctg 247  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| ||||||||||||||  |||||| ||||||    
T  21988907 ggtgtgtttgttccttttctttcattgcttatctttattgctttgattatgtttgtggtgttgctctacacccagatttaggtctg 21988822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 44848636 - 44848852
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| |||||||||| ||||| ||  |||||  |||||  ||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  44848636 aaatgggtagaaattaggtcttattcttgtgtaagcttgcaagcttttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 44848734  T
Q  118 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||| ||| ||  |||||||||||| ||||||||| || | ||   | ||||||||| |||||| |||||||||||||||||| | || |||||  |||||    
T  44848735 tctcccccaggttaggtcatattgaaccgaactgggtcaacaatcttttggtgtgtatgttcc-ttctttcattgcttatctttgtt-ctttgtatatgc 44848832  T
Q  214 ttgtagtgttgctctacact 233  Q
    |||| |||||||||||||||    
T  44848833 ttgtggtgttgctctacact 44848852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 47263754 - 47263607
Alignment:
Q  86 cactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctt 182  Q
    |||||||||| |||||||||||||  |||||||| ||| | | |||||||||||||||||||||| || | ||   | |||||||||||||| |||  ||    
T  47263754 cactttcatcatagtggattggagagctgctctccccc-atattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtttctta-tt 47263657  T
Q  183 tcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 233  Q
    ||||||||||||| |||| ||||| |||||||||| |||||||||||||||    
T  47263656 tcattgcttatctttatt-ctttgtttatgcttgtggtgttgctctacact 47263607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 22270107 - 22270201
Alignment:
Q  125 agagtaggtcatattggaccgaactgagttaccatct--tggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgt 217  Q
    |||||||||||  ||||||||||||| || | |||||  ||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||    
T  22270107 agagtaggtcaagttggaccgaactgggtgaacatctcttggtgtgtttgttcctttctttcattgtttatctttattgctttgattatgattgt 22270201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 65 - 233
Target Start/End: Complemental strand, 18413737 - 18413570
Alignment:
Q  65 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggaccgaactgagttacca---tct 161  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||  |||||||||||| ||| |||| |||||||| | |||||| || | ||   | |    
T  18413737 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctccccagattaggccatattgg-ctgaactgggtcaacaatcttt 18413640  T
Q  162 tggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 233  Q
    ||||||||||||| ||||||||| ||||||||||   ||||||||  | ||||||| |||||||||||||||    
T  18413639 tggtgtgtttgtt-ctttctttc-ttgcttatcttggttgctttgtatttgcttgtggtgttgctctacact 18413570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 9235533 - 9235596
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatt 80  Q
    |||||||||||| |||||| ||||||||||||  ||||| ||||||||||||||||||||||||    
T  9235533 aaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt 9235596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 21646152 - 21646028
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||   |||||||||||||| ||  |||||  |||||| ||| |||||||| | ||| || |||||||||| |||||||||||||  |||||    
T  21646152 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccctttt-taacactttcatcatagtggattggagagctgct 21646054  T
Q  117 ctc-tccctagagtaggtcatattgg 141  Q
    ||| |||||||| |||| ||||||||    
T  21646053 ctcttccctagattaggccatattgg 21646028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 24526052 - 24525985
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttg 82  Q
    ||||||||||||| ||||||| ||||||||| | |||||| |  |||||||||||||||||||||||||    
T  24526052 gaaaatgggtagaaattaggttttgttcttt-gtgagcttgtcaaagctaatttcttgtaactcatttg 24525985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 30814574 - 30814637
Alignment:
Q  129 taggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgctt 191  Q
    |||||||  ||||||||||||| || | || | |||||||||||||||||||||||||||||||    
T  30814574 taggtcaagttggaccgaactgggtcaacaattttggtgtgtttgttcctttctttcattgctt 30814637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 2361127 - 2361052
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||  ||||||||| | |||||| |  ||||||||||||||||||||||||||||| ||||    
T  2361127 gaaaatgggtagaaattaggg-ttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 2361052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 21639954 - 21639849
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||   |||||||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||  |||||||||||||  |||||    
T  21639954 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcattatagtggattggagagctgct 21639856  T
Q  117 ctctccc 123  Q
    |||||||    
T  21639855 ctctccc 21639849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 29608750 - 29608825
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||  ||||||||| | |||||| |  ||||||||||||||||||||||||||||| ||||    
T  29608750 gaaaatgggtagaaattaggg-ttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 29608825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 31155974 - 31155920
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  31155974 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 31155920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 38671377 - 38671302
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||  ||||||||| | ||||||  |||||||||||| ||||||| |||||||||||||||    
T  38671377 gaaaatgggtagaaattaggg-ttgttcttt-gtgagcttgtttaagctaatttattgtaacacatttgtatcacttt 38671302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 48599489 - 48599414
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||  ||||||||| | |||||| |  ||||||||||||||||||||||||||||| ||||    
T  48599489 gaaaatgggtagaaattaggg-ttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 48599414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 8153397 - 8153430
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  8153397 aagctaatttcttgtaactcatttgtatctcttt 8153430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 23565216 - 23565141
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||| |||||| ||||||||||||||||| | |||||| |  || ||||||||||||||||| |||||||| ||||    
T  23565216 aaaataggtagaaattaggtcttgttcttt-gtgagcttgttgaaactaatttcttgtaactcttttgtatctcttt 23565141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 3e-78; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 10077115 - 10077351
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||||||  ||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||||||| |||||    
T  10077115 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaacttttttgtaacactttcatcatagtggattggagggctgct 10077214  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| ||||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10077215 ctctcccccagattaggtcatattggaccgaattgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatgct 10077314  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  10077315 tgtggtgttgctctacacttagatttaggtctgtttt 10077351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 4630101 - 4629864
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||| |||||| |||||||||||||||||||  ||||| |||| |||||||||||||||  |||||| ||||||||||||||||||||||||  |||||    
T  4630101 aaaataggtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaactattttgtaacactttcatcttagtggattggagagctgct 4630002  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagttacca-tcttgg-tgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    |||| ||||||| ||||||||||||||| ||||||||| | || |||| | ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4630001 ctcttccctagattaggtcatattggactgaactgagtcaacaatctttgatgtgtttgttcctttctttcattgcttatctttattgctttgattatgc 4629902  T
Q  214 ttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  4629901 ttgtggtgttgctctacacttagatttaggtctgtttt 4629864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 31979660 - 31979424
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||||||  ||||| |||| |||||||||||||||| |||| | ||||||||||||||||||||||||| |||||    
T  31979660 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaactcttttgcaacactttcatcttagtggattggagggctgct 31979561  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||| ||| || ||||||||||||||||||| ||  || |||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  31979560 ctctcccccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctctatttcattgcttatctttattgctttgattatgct 31979461  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||  ||||||||||||||||||||| ||||||||||    
T  31979460 tgtgatgttgctctacacttagatttaggtctgtttt 31979424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 57 - 251
Target Start/End: Complemental strand, 22963806 - 22963611
Alignment:
Q  57 taagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggaccgaactgagttac 156  Q
    ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||||||||| ||| | |||||||||| ||||||||| || |     
T  22963806 taagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccccagatttggtcatattgcaccgaactgggtcaa 22963707  T
Q  157 ca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    || |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| | ||||||||||    
T  22963706 caatcttggtgtgtttgttcctttctttcatagcttatctctattgctttgattatgcttgtggtgttgctctacacttagatctaggtctgtttt 22963611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 57 - 251
Target Start/End: Original strand, 23824587 - 23824782
Alignment:
Q  57 taagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggaccgaactgagttac 156  Q
    ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||||||||| ||| | |||||||||| ||||||||| || |     
T  23824587 taagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccccagatttggtcatattgcaccgaactgggtcaa 23824686  T
Q  157 ca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    || |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| | ||||||||||    
T  23824687 caatcttggtgtgtttgttcctttctttcatagcttatctctattgctttgattatgcttgtggtgttgctctacacttagatctaggtctgtttt 23824782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 18232992 - 18232756
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| |||||| |||||||||||||| |||||| |||||||||| ||||| ||||||||  ||||    
T  18232992 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctgatttcttgtaactcttttgtaacactttcatcatagtgaattggagggttgct 18232893  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| ||||||||||||||||||  ||||| | || ||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  18232892 ctctcccccagattaggtcatattggaccgatttgagtcaacaatcttggtgtgtttgttcctctctttcatcgcttatctttattgctttgattatgct 18232793  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||| | ||| ||||||    
T  18232792 tgtggtgttgctctacacttagatctaggtttgtttt 18232756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 24435921 - 24436143
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| ||||||||||||| |||||  ||||| |||||||||||||||||| ||||||||| || ||||||| |||||||| ||||| |||||    
T  24435921 aaaatgggtagaaattaggtcttgtttttttgtaagcttataagctaatttcttgtaattcatttgtaacattttcatcctagtggatcggagggctgct 24436020  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttg-ttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||| || ||||||| | || ||||||| | |||||||| |||||||    
T  24436021 ctctcccctagagtaggtcatattggatcgaactgggttaccatcttggtgtgtttgttttctttcttgc-tttcttatctttgttgctttgtttatgct 24436119  T
Q  215 tgtagtgttgctctacacttagattt 240  Q
    ||| ||||  ||||||||||||||||    
T  24436120 tgttgtgt--ctctacacttagattt 24436143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 17 - 206
Target Start/End: Original strand, 5572191 - 5572382
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||| ||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  5572191 aaaatgcgtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 5572290  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttg 206  Q
    |||| ||||||| ||||||||||||||||||| || ||  || |||||||||||||||||| ||||||||| ||||||| | ||||||||||    
T  5572291 ctctcccctagattaggtcatattggaccgaattgggtcaacaatcttggtgtgtttgttcatttctttcactgcttatatttattgctttg 5572382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 5017430 - 5017654
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| |||||||||||||||||||           ||||||||| |||| |||||||||  ||||    
T  5017430 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac-----------actttcatcatagtagattggagggttgct 5017518  T
Q  117 ctctccc-tagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    ||||||| |||| ||||||||||| |||||||||| || | || ||||||||||||||||||||||||||||||||||||| | | ||||||||||||||    
T  5017519 ctctcccctagattaggtcatatttgaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttgt-gctttgattatgct 5017617  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||| | ||||||||||    
T  5017618 tgtggtgttgctctacacttagatctaggtctgtttt 5017654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 17 - 247
Target Start/End: Original strand, 21801294 - 21801531
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||| ||||||||||||||  ||||| |||| |||||||||||||||| |||||| |||||| |||||||||||||||||  |||||    
T  21801294 aaaatgggtagaaattaagtcttgttcttttgtaagcttataagataatttcttgtaactcttttgtaacacttttatcttagtggattggagagctgct 21801393  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagttacc------atc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgat 208  Q
    | || ||| ||| ||||||||||||||| |||||| || | |      ||| ||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  21801394 cgctcccccagattaggtcatattggactgaactg-gtcaacacttttatctttggtgtgtttgttcctttctttcattacttatctttattgctttgat 21801492  T
Q  209 tatgcttgtagtgttgctctacacttagatttgggtctg 247  Q
    |||| |||| || ||| ||||||||||||||| ||||||    
T  21801493 tatgattgtggtattgttctacacttagatttaggtctg 21801531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 31086423 - 31086603
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| ||||||||||| |||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||   ||||    
T  31086423 aaaatgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactcctttgtaacactttcatcatagtggattggagagttgct 31086522  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatct 195  Q
    |||| ||||||| ||| ||||||||||| |||||| ||  || ||||||||||||||||||||||||||||||||||||||    
T  31086523 ctctcccctagattagatcatattggactgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatct 31086603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 80 - 251
Target Start/End: Complemental strand, 31936671 - 31936498
Alignment:
Q  80 ttgtatcactttcatcttagtggattggaggactgctctctc-cctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcct 177  Q
    ||||| ||||||||| ||||||||||||||  |||||||||| || ||| |||||||||||||||||||||  || | || |||||||||||||||||||    
T  31936671 ttgtaacactttcatattagtggattggagagctgctctctctcccagactaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgttcct 31936572  T
Q  178 ttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
     ||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||||  ||||||||||    
T  31936571 atctttcattgcttatctttattgctttgtttatgcttgtggtgttgctctacactttgattaaggtctgtttt 31936498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 5757430 - 5757646
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| |||||||||||||||| |   |||||  |||||| ||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  5757430 aaatgggtagaaattaggtcttgttcttgtataagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 5757528  T
Q  118 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||| ||| ||| |||||||||||||||||||||| || | ||   | |||||||||||||||| |||||||||||||||||| | || ||||| ||||||    
T  5757529 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcc-ttctttcattgcttatctttgtt-ctttgtttatgc 5757626  T
Q  214 ttgtagtgttgctctacact 233  Q
    |||| |||||||||||||||    
T  5757627 ttgtggtgttgctctacact 5757646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 31076892 - 31077116
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||| || | ||||||||||||||||| | || || |||||||||||| ||||||| ||||||||||||||| |||||||||||||||||  |||||    
T  31076892 aaaatggataaaaattaggtcttgttcttt-gtgaactcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 31076990  T
Q  117 ctctcc-ctagagtaggtcatattggaccgaactgagttacc-atcttggtgtgtttgttcctttctttcattgcttatctatattgc-tttgattatgc 213  Q
     |||||   |||||||||||||||||||  ||||  |||||| |||||||| |||||||| | ||||||| | |||||| | | |||| |||||||||||    
T  31076991 atctcctagagagtaggtcatattggactaaactaggttaccaatcttggtatgtttgtttcattctttc-tggcttatatttgttgcttttgattatgc 31077089  T
Q  214 ttgtagtgttgctctacacttagattt 240  Q
    || |  ||||| |||||||||||||||    
T  31077090 ttatgatgttgttctacacttagattt 31077116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 21356182 - 21355965
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||||||| |||||||||||||||| ||  |||||  ||| ||  ||||||||||||| || ||| |||||||||| |||||||||||||  |||||    
T  21356182 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttatttttcttgtaactc-ttagtaacactttcatcatagtggattggagagctgct 21356084  T
Q  117 ctctcc-ctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 212  Q
    |||||| | ||| |||||||||||||||||||||| || | ||   | |||||||||||||| | |||||||||||||||||| | || |||||  ||||    
T  21356083 ctctcctccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtttc-ttctttcattgcttatctttgtt-ctttgtatatg 21355986  T
Q  213 cttgtagtgttgctctacact 233  Q
    ||||| |||||||||||||||    
T  21355985 cttgtggtgttgctctacact 21355965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 14521819 - 14521688
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||| ||||| |||||||  |||||||| | ||||| ||  |||||||| |||||||||||||||||||||||||||||| || |||||||   ||||    
T  14521819 aaaatgtgtagaaattaggttgtgttcttt-gtgagctcttgtgctaattt-ttgtaactcatttgtatcactttcatcttattgaattggagaggtgct 14521722  T
Q  117 ctctcc-ctagagtaggtcatattggaccgaact 149  Q
    |||||| | |||||||||||||||||||||||||    
T  14521721 ctctcctcgagagtaggtcatattggaccgaact 14521688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 80 - 210
Target Start/End: Complemental strand, 27165767 - 27165635
Alignment:
Q  80 ttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcc 176  Q
    ||||||||||||||||||||| ||||||||| || |||| | ||| | ||||||||||||||||||| |||| ||  || ||| |||||||| |||||||    
T  27165767 ttgtatcactttcatcttagttgattggagggctactctgtcccccatagtaggtcatattggaccg-actgggtaaacaatctttggtgtggttgttcc 27165669  T
Q  177 -tttctttcattgcttatctatattgctttgatta 210  Q
     ||||||||||||||||||| | ||||||||||||    
T  27165668 ttttctttcattgcttatct-ttttgctttgatta 27165635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 251
Target Start/End: Complemental strand, 22709102 - 22708930
Alignment:
Q  80 ttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttc 175  Q
    ||||| |||||||||| |||||||||||||  ||||||||||||  ||| ||| |||||||| ||||||||  || | ||   | |||||||||||||||    
T  22709102 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattgaaccgaactaggtcaacaattttttggtgtgtttgttc 22709003  T
Q  176 ctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
     || ||||| |||||||||| ||||||||||  ||  ||||| ||||||||||||| |||||| | ||||||||||    
T  22709002 -ttcctttc-ttgcttatctttattgctttggatacacttgtggtgttgctctaca-ttagatctaggtctgtttt 22708930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 1115055 - 1115159
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||| |||| ||||||  ||||| ||||  ||||||||||| | ||||||||||||  |||||||||| | | ||| |||||||||||||  |||||    
T  1115055 aaaatggatagaaattagggtttgttattttt-gagcttttaagttgatttcttgtaacctatttgtatcattcttatcatagtggattggagatctgct 1115153  T
Q  117 ctctcc 122  Q
    ||||||    
T  1115154 ctctcc 1115159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 5572737 - 5572782
Alignment:
Q  206 gattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||    
T  5572737 gattatgcttgtggtgttgctctacacttagatttatgtctgtttt 5572782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 2973094 - 2973019
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||| ||||||||| | |||||| |  |||||||||||||||||| |||||||||| ||||    
T  2973094 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 2973019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 5043640 - 5043715
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||| ||||| ||||||| ||||||||| | |||||| |  ||||||||||||||||||||||||||||| ||||    
T  5043640 gaaaatgagtagaaattaggt-ttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 5043715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 12195578 - 12195524
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  12195578 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 12195524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 16569046 - 16569106
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagct--tttaagctaatttcttgtaac 75  Q
    ||||||||||||| ||||||| |||||| |||| |||||  |||||||||||||||||||||    
T  16569046 gaaaatgggtagaaattaggttttgttc-tttgtgagcttgtttaagctaatttcttgtaac 16569106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 17763003 - 17763073
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatc 86  Q
    ||||||||||||| ||||||  ||||||||| | |||||| |  |||||||||||||||||||||||||||||    
T  17763003 gaaaatgggtagaaattaggg-ttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatc 17763073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 26065233 - 26065286
Alignment:
Q  97 tagtggattggaggactgctctctccctagagtaggtcatattggaccgaactg 150  Q
    |||||||| ||||| |||||||||||| ||| |||||||  |||||||||||||    
T  26065233 tagtggatcggagggctgctctctccccagactaggtcaatttggaccgaactg 26065286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 26085202 - 26085255
Alignment:
Q  97 tagtggattggaggactgctctctccctagagtaggtcatattggaccgaactg 150  Q
    |||||||| ||||| |||||||||||| ||| |||||||  |||||||||||||    
T  26085202 tagtggatcggagggctgctctctccccagactaggtcaatttggaccgaactg 26085255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 1e-77; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 40844798 - 40844563
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||| |||| |||||    
T  40844798 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggatttgagggctgct 40844699  T
Q  117 ctctccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgctt 215  Q
    ||||||| ||| ||||||||||||||||||||||| |  || ||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||    
T  40844698 ctctccccagattaggtcatattggaccgaactgaatcaacaatcttggtgtgttcgttcatttctttcattgcttatctttattgctttgattatgctt 40844599  T
Q  216 gtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||||||||||||||||||||||||| ||| ||||||    
T  40844598 gtagtgttgctctacacttagatttaggtttgtttt 40844563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 17 - 253
Target Start/End: Original strand, 18552823 - 18553061
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  18552823 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 18552922  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||| ||| |||||||||||||||||||||| ||  || |||||||||| |||||||||||||||||||| |||||| |||||||||||||||| |    
T  18552923 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtatttgttcctttctttcattgattatctttattgctttgattatgtt 18553022  T
Q  215 tgtagtgttgctctacacttagatttgggtctgttttac 253  Q
    ||| |||||||||||||||||||||| | ||||||||||    
T  18553023 tgtggtgttgctctacacttagatttagttctgttttac 18553061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 3328297 - 3328532
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||| ||||||||||||  ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| |||||    
T  3328297 aaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattgaagggctgct 3328395  T
Q  117 ctctcc-ctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||| ||||| ||||||||||||||  |||||| || | || ||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  3328396 ctctcctctagattaggtcatattggaatgaactgggtcaacaatcttggtgtgtttgttcctctctttcattgcttatctttattgttttgattatgct 3328495  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  3328496 tgtggtgttgctctacacttagatttaggtctgtttt 3328532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 40592722 - 40592959
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| ||||| | |||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||| ||||||||  || ||    
T  40592722 aaaatgggtagaaattagattttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtcgattggagagcttct 40592821  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttccttt-ctttcattgcttatctatattgctttgattatgc 213  Q
    |||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40592822 ctctcccacagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttccttttctttcattgcttatctatattgctttgattatgc 40592921  T
Q  214 ttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  40592922 ttgtggtgttgctctacacttagatttaggtctgtttt 40592959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 37466437 - 37466214
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||| ||||||||||||  ||||| |||  ||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||    
T  37466437 aaaatgggtagaaattaggacttgttcttttgtaagcttataaattaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctact 37466339  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  37466338 ctctcccccagattaggtcatattggaccgaactgtgtcaacaatcttggtgtgtttgttcatttctttcattgcttatctttattgctttgattatgct 37466239  T
Q  215 tgtagtgttgctctacacttagatt 239  Q
    |||| ||||||||||||||||||||    
T  37466238 tgtaatgttgctctacacttagatt 37466214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 3715942 - 3716178
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||| ||||||||||| ||  || || ||||||||||||||||||||| |||||| |||||||||| |||| ||||||||  |||||    
T  3715942 aaaatgggtagaaattaagtcttgttcttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtagattggagagctgct 3716041  T
Q  117 ctctc-cctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    ||||| |||||| |||||||||||||||||||||| || | || ||||||||||||||||||| ||||||||||||||||| ||||| | ||||||||||    
T  3716042 ctctctcctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctctctttcattgcttatctttattgttgtgattatgct 3716141  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| ||||||||||||||||||||||  |||||||||    
T  3716142 tgtggtgttgctctacacttagatttatgtctgtttt 3716178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 26299135 - 26298899
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| |   || || ||||||||||||||||||||| |||||| |||||||||| |||| ||||||||| |||||    
T  26299135 aaaatgggtagaaattaggtcttgttcttgtctaagtttataagctaatttcttgtaactcttttgtaacactttcatcatagtagattggagggctgct 26299036  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| || ||||||||| ||||||||| || | || ||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||    
T  26299035 ctctcccccagattatgtcatattgaaccgaactgggtcaacaatcttggtgtgtttgttcctctctttcgttgcttatctttattgctttgattatgct 26298936  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  26298935 tgtggtgttgctctacacttagatttaggtctgtttt 26298899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 48438361 - 48438125
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| || |||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  48438361 aaaatgggtagaaattaggtcttgttcttgtgtaagcttatatgctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 48438262  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||| ||| |||||||||||||||||||||  ||  |  |||||||||||||||||||||||| |||||| |||||| ||||| ||||||||||||    
T  48438261 ctctcccccagattaggtcatattggaccgaactaggtcaataatcttggtgtgtttgttcctttctgtcattgtttatctttattgttttgattatgct 48438162  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||| | ||||||||||    
T  48438161 tgtggtgttgctctacacttagatctaggtctgtttt 48438125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 24695104 - 24695339
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||||||  || || ||||||||||||||||||||| |||||| |||||||||| ||| ||||| ||||  ||||    
T  24695104 aaaatgggtagaaattaggtcttgttcttttgtaagtttataagctaatttcttgtaactcttttgtaacactttcatcatagcggattagagggttgct 24695203  T
Q  117 ctctccc-tagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    ||||||| |||| |||||||||||||||||||||  ||  || |||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  24695204 ctctcccgtagattaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgttcatttctttcattgtttatctttattgctttgattatgct 24695303  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| ||||||||||| |||||||||| | ||||||||    
T  24695304 tgt-gtgttgctctatacttagatttagctctgtttt 24695339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 8370428 - 8370663
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| |||| ||||||||||| ||  ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  8370428 aaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 8370526  T
Q  118 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||| ||| ||| |||||||||||||||||||||| || | ||   | ||||||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  8370527 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttctttcattgcttatct-ttgtgctttgattatgc 8370625  T
Q  214 ttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||| |||||||||||||||||||| | ||||||||||    
T  8370626 ttgtggtgttgctctacacttagatctaggtctgtttt 8370663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 1417431 - 1417655
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||| ||||||||||||  || || |||||||||||||| ||||||||| ||| ||||||| |||||||||||||||||  ||||    
T  1417431 aaaatgggtagaaattaggacttgttcttttgtaagtttataagctaatttcttataactcatt-gtaacactttcttcttagtggattggagggatgct 1417529  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  1417530 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctctctttcattgcttatctttattgctttgattatgct 1417629  T
Q  215 tgtagtgttgctctacacttagattt 240  Q
    |||  |||| ||||||||||||||||    
T  1417630 tgtgatgttactctacacttagattt 1417655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 17 - 220
Target Start/End: Original strand, 1736245 - 1736450
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| |||| |||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  1736245 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 1736344  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||| ||| |||||||||||||||||||||| ||  || || ||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  1736345 ctctcccccagattaggtcatattggaccgaactgggtcaacaatattggtgtgtttgttcctttctttcattgcttatgtttattgctttgattatgct 1736444  T
Q  215 tgtagt 220  Q
    ||||||    
T  1736445 tgtagt 1736450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 21711368 - 21711154
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| ||||||||||| |||| ||  ||||||||||||||||||||||||||| |||||| |||||||||| ||||||||| |||  ||||||    
T  21711368 aaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatagtggatttgagagctgctc 21711270  T
Q  118 tctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgctt 215  Q
    ||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  21711269 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctctattgctttgattatgcct 21711170  T
Q  216 gtagtgttgctctaca 231  Q
     | |||||||||||||    
T  21711169 atggtgttgctctaca 21711154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 25795928 - 25795702
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||||||  ||||| ||||||||||||||||||||| || ||| ||||||||||||||| ||||||||  |||||    
T  25795928 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactctttcgtaacactttcatcttagtagattggagagctgct 25795829  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    |||| ||| ||| |||||||||||||||||||||  ||  || ||| ||||||||||||||| ||||||||||||||||| | ||||| ||| |||||||    
T  25795828 ctctcccccagattaggtcatattggaccgaactaggtcaacaatctttggtgtgtttgttcatttctttcattgcttatttttattgtttttattatgc 25795729  T
Q  214 ttgtagtgttgctctacacttagattt 240  Q
    |||| ||||||||||||||||||||||    
T  25795728 ttgtggtgttgctctacacttagattt 25795702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 69 - 251
Target Start/End: Original strand, 25929435 - 25929618
Alignment:
Q  69 ttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggaccgaactgagttaccatcttggtgtg 168  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  25929435 ttgtaactcatttgtatcactttcatcttagtggattggagggctgctctccccccagagtaggtcgtattggaccgaactgggttaccatcttggtgtg 25929534  T
Q  169 tttg--ttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||||  || ||||||| | || ||||||| | |||||||||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  25929535 tttgtttttctttcttgc-tttcttatctttgttgctttgattatgtttgtggtgttgctctacacttagatttaggtttgtttt 25929618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 20 - 251
Target Start/End: Original strand, 30709733 - 30709967
Alignment:
Q  20 atgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctc 119  Q
    ||||||||| ||||||||||| |||| ||  ||||| ||||||||||||||||||||| |||||| || ||||||| |||||||||||||| ||||||||    
T  30709733 atgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactcttttgtaacaatttcatcatagtggattggagggctgctctc 30709832  T
Q  120 t-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgctt 215  Q
    | ||| ||| |||||||||||||||||||||| || | ||   | ||||||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  30709833 tcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttctttcattgcttatct-ttgtgctttgattatgctt 30709931  T
Q  216 gtagtgttgctctacacttagatttgggtctgtttt 251  Q
     | ||||||||||| |||||||| | ||||||||||    
T  30709932 atggtgttgctctaaacttagatctaggtctgtttt 30709967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 6794654 - 6794889
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||||||| |||||| ||||||||| ||  |||||  |||||||||| |||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  6794654 aaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctaattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgct 6794752  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  | | |||||||||||||||| ||| | || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6794753 ctctcccccatattaggtcatattggacctaaccgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctctattgctttgattatgct 6794852  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||  || | |||||||||||||||| ||||||||||    
T  6794853 tgtgatgctactctacacttagatttaggtctgtttt 6794889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 17 - 231
Target Start/End: Original strand, 4386868 - 4387084
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||| ||||| ||||||| ||||||||| | |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||  |||||    
T  4386868 aaaatgagtagaaattaggttttgttcttt-gtgagcttttaagctaatttcttgtaacccatttgtatcacttttatcttattggattggagagctgct 4386966  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    |||| ||| ||||||||||||| || ||  ||||| ||  || ||| ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  4386967 ctctcccccagagtaggtcatactgaactaaactgggtaaacaatctttgatgtgtttgttcctttctttcattgcttatctttattgttttgattatgc 4387066  T
Q  214 ttgtagtgttgctctaca 231  Q
     ||| | |||| ||||||    
T  4387067 atgtggcgttgttctaca 4387084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 36029240 - 36029060
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  || || ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  36029240 aaaatgggtagaaattaggtcttgttcttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 36029141  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatct 195  Q
     ||| ||| ||| ||||||||||||||| |||||| ||  || |||| |||||||||||||||||||||||||||||||||    
T  36029140 ttctcccccagattaggtcatattggacagaactgggtcaacaatctcggtgtgtttgttcctttctttcattgcttatct 36029060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 16264495 - 16264273
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||| ||||| |||||||||||||||| ||  |||||  |||||| ||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  16264495 aaatgtgtagaaattaggtcttgttcttgtggaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 16264397  T
Q  118 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||| ||| ||| |||||||||||||||||||||  || | ||   | || ||||||||||||||||||||||||| |||||| |  |||||||||||||     
T  16264396 tctcccccagattaggtcatattggaccgaactaggtcaacaatctttttgtgtgtttgttcctttctttcattgtttatct-ttgtgctttgattatgt 16264298  T
Q  214 ttgtagtgttgctctacacttagat 238  Q
    |||| ||||||||||||||||||||    
T  16264297 ttgtggtgttgctctacacttagat 16264273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 35925625 - 35925393
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| ||||||| |||||||  ||  ||||| ||| ||||||||||||||||| |||||| |||||||||| ||||||||||||| ||||| |    
T  35925625 aaatgggtagaaattaggttttgttctagtgtaagcttataaactaatttcttgtaactc-tttgtaacactttcatcatagtggattggagaactgc-c 35925528  T
Q  118 tctccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
     ||||| | | |||||||||||||||||||||  || | ||   | ||||||||||||||| |||||||||||||| |||| |  || ||||||||||||    
T  35925527 cctccc-aaattaggtcatattggaccgaactaggtcaacaatcttttggtgtgtttgttcttttctttcattgctcatct-ttgtgttttgattatgct 35925430  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||| | ||||||||||    
T  35925429 tgtggtgttgctctacacttagatctaggtctgtttt 35925393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 27974893 - 27975110
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||||||| |||||||||||||||| ||  |||||  |||||| ||| |||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  27974893 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgct 27974991  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 212  Q
    |||| ||| ||| |||||||||||||||||||||| || | ||   | |||||||||||||||| |||||||||||||||||| | || ||||  |||||    
T  27974992 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcc-ttctttcattgcttatctttgtt-ctttatttatg 27975089  T
Q  213 cttgtagtgttgctctacact 233  Q
    ||||| |||||||||||||||    
T  27975090 cttgtggtgttgctctacact 27975110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 47923845 - 47924006
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttt-tgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgc 115  Q
    |||||||||| | ||||||| ||| ||||| ||  | ||||||||||||||||||||||||| |||||| |||||||||| |||| ||||| ||| ||||    
T  47923845 aaaatgggtataaattaggttttgctctttgtgtaaacttttaagctaatttcttgtaactcttttgtagcactttcatcatagtagattgaagggctgc 47923944  T
Q  116 tctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttc 175  Q
    ||||| ||||||| |||||||||||||| ||||||| ||  || ||||||||||||||||||    
T  47923945 tctctcccctagattaggtcatattggatcgaactgggtcaacaatcttggtgtgtttgttc 47924006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 3323633 - 3323756
Alignment:
Q  19 aatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctct 118  Q
    |||||||||| |||| | ||||||||||||  ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| |||    
T  3323633 aatgggtagaaattatgacttgttcttttgtaagcttataagctaatttcttgtaactca-ttgtaacactttcatcttagtggattggagggctgttct 3323731  T
Q  119 ctc-cctagagtaggtcatattgga 142  Q
    ||| || ||| ||||||||||||||    
T  3323732 ctctcccagattaggtcatattgga 3323756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 80 - 233
Target Start/End: Original strand, 27986449 - 27986604
Alignment:
Q  80 ttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttc 175  Q
    ||||| |||||||||| |||||||||||||  ||||||||| ||| ||| |||||||||||||||||||||| || | ||   | ||||||||||||||     
T  27986449 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtt- 27986547  T
Q  176 ctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 233  Q
    | ||||||| |||||||||| ||||||||||  ||||||||| |||||||||||||||    
T  27986548 cattctttc-ttgcttatctttattgctttgtatatgcttgtggtgttgctctacact 27986604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 80 - 233
Target Start/End: Original strand, 33386669 - 33386825
Alignment:
Q  80 ttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttc 175  Q
    ||||| |||||||||| |||||||||||||  ||||||||||||  ||| ||||||||||||||||||||||  | | ||   | ||||||||||||||     
T  33386669 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaacaatcttttggtgtgtttgttt 33386768  T
Q  176 ctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 233  Q
    ||| |||||||||||||||| ||||| |||| |||| ||||| |||||||||||||||    
T  33386769 ctt-ctttcattgcttatctttattgttttggttatacttgtggtgttgctctacact 33386825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 80 - 233
Target Start/End: Original strand, 39039995 - 39040151
Alignment:
Q  80 ttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttc 175  Q
    ||||| |||||||||| |||||||||||||   || ||||| ||| ||| |||||||||||||||||||||  || | ||   | |||||||||||||||    
T  39039995 ttgtaacactttcatcatagtggattggagagttgttctcttccccagattaggtcatattggaccgaactaggtcaacaatcttttggtgtgtttgttc 39040094  T
Q  176 ctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 233  Q
    |||||||||||||||||||| |  ||||||| |||||||||| |||||||||||||||    
T  39040095 ctttctttcattgcttatct-ttgtgctttgtttatgcttgtggtgttgctctacact 39040151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 32143467 - 32143250
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||   |||||||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  32143467 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 32143369  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 212  Q
    |||| ||| ||| |||||||||||||||||||||  || | ||   | |||||||||||||| ||| ||||| |||||||||| ||||||||||  | ||    
T  32143368 ctctcccccagattaggtcatattggaccgaactaggtcaacaatcttttggtgtgtttgtt-cttcctttc-ttgcttatctttattgctttgtatttg 32143271  T
Q  213 cttgtagtgttgctctacact 233  Q
    ||||| |||||||||||||||    
T  32143270 cttgtggtgttgctctacact 32143250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 8126777 - 8126684
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggagg 110  Q
    |||||||||||| |||| || |||||||||||  ||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  8126777 aaaatgggtagaaattaagtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcgtagtggattggagg 8126684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 21353708 - 21353604
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||  |||||||| | ||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||    
T  21353708 aaaatgggtagaaattaggttgtgttcttt-gtgagctcttgtgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 21353610  T
Q  117 ctctcc 122  Q
    ||||||    
T  21353609 ctctcc 21353604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 34491346 - 34491449
Alignment:
Q  125 agagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgt 222  Q
    |||||||||||  ||||||||||||| ||  || ||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| || |    
T  34491346 agagtaggtcaagttggaccgaactgggtgaacaatctttggtgtgtttgttcatttctttcattgcttatctttattgctttgattatgattgtggttt 34491445  T
Q  223 tgct 226  Q
    ||||    
T  34491446 tgct 34491449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 8126682 - 8126612
Alignment:
Q  181 tttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||||||||||||||| ||||||||||||||||  ||| |||||||||||||||||||||| ||| ||||||    
T  8126682 tttcattgcttatctttattgctttgattatgagtgtggtgttgctctacacttagatttaggtatgtttt 8126612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 26928541 - 26928757
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt--cttgtaactcatttgtatcactttcatcttagtggattggaggactgc 115  Q
    |||||||||||   |||||||||||||| ||  |||||  |||||| |||  |||||||| | |||||| |||||||||| |||||||||||||   |||    
T  26928541 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctattttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagttgc 26928639  T
Q  116 tctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattat 211  Q
    ||||| ||| ||| ||||||||||||| | |||||| || | ||   | |||||||||||||| ||||||||| | |||||||| ||||||||||  | |    
T  26928640 tctctcccccagattaggtcatattgg-ctgaactgggtcaacaatcttttggtgtgtttgtt-ctttctttc-tagcttatctttattgctttgtattt 26928736  T
Q  212 gcttgtagtgttgctctacac 232  Q
    |||||| ||||||||||||||    
T  26928737 gcttgtggtgttgctctacac 26928757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 27453056 - 27452914
Alignment:
Q  65 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttacca---tc 160  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||  ||||||||| |||  || ||||||||||||||||||||||  | | ||   |     
T  27453056 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccggattaggtcatattggaccgaactggatcaacaatctt 27452958  T
Q  161 ttggtgtgtttgttcctttctttcattgcttatctatattgctttg 206  Q
    |||||||||||||||| ||||||| |||||||||| ||||||||||    
T  27452957 ttggtgtgtttgttcc-ttctttc-ttgcttatctttattgctttg 27452914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 27026925 - 27026856
Alignment:
Q  181 tttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||||||||||||||| | | ||||||||||||||||| |||||||||||||||||||| | ||||||||||    
T  27026925 tttcattgcttatctttgt-gctttgattatgcttgtggtgttgctctacacttagatctaggtctgtttt 27026856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 25929365 - 25929405
Alignment:
Q  69 ttgtaactcatttgtatcactttcatcttagtggattggag 109  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25929365 ttgtaactcatttgtatcactttcatcttagtggattggag 25929405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 27038270 - 27038201
Alignment:
Q  181 tttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||||||||||||||| | | ||||||||||||||||| |||||||||||||||||||| | | ||||||||    
T  27038270 tttcattgcttatctttgt-gctttgattatgcttgtggtgttgctctacacttagatctagatctgtttt 27038201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 32744552 - 32744516
Alignment:
Q  55 tttaagctaatttcttgtaactcatttgtatcacttt 91  Q
    |||||||||||||||||||||||||||||||||||||    
T  32744552 tttaagctaatttcttgtaactcatttgtatcacttt 32744516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 47649716 - 47649656
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactc 77  Q
    |||||||||||| |||||||||||||||| ||  ||||| |||| ||||||||||||||||    
T  47649716 aaaatgggtagaaattaggtcttgttcttgtggaagcttgtaagttaatttcttgtaactc 47649656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 760860 - 760935
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||||| ||||||| | ||||||  |||||||||||||||||||| |||||||||| ||||    
T  760860 gaaaatgggtagaaattaggtct-gttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 760935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 233
Target Start/End: Complemental strand, 1306046 - 1305878
Alignment:
Q  65 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttacca---tc 160  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||  ||||| ||| ||||||| |||| |||||||| | |||||| || | ||   |     
T  1306046 tttcttgtaaccc-tttgtaacactttcatcgtagtggattggagagctgctatctcccctagattaggccatattgg-ctgaactgggtcaacaatctt 1305949  T
Q  161 ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 233  Q
    |||||||||||||| ||| ||||| ||||||||||   ||||||||  | ||||||| |||||||||||||||    
T  1305948 ttggtgtgtttgtt-cttcctttc-ttgcttatcttggttgctttgtatttgcttgtggtgttgctctacact 1305878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 1417230 - 1417176
Alignment:
Q  197 tattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||||||||||||||||||||  || | |||||||||||||||| ||||||||||    
T  1417230 tattgctttgattatgcttgtgatgctactctacacttagatttaggtctgtttt 1417176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 22835157 - 22835082
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||| ||||||||| | ||||||  |||||||||||||||||||| |||||||||| ||||    
T  22835157 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 22835082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 32891116 - 32891192
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| |||| || ||||||||| | |||||| |  ||||||||||||||||||||||||||||| ||||    
T  32891116 gaaaatgggtagaaattaagttttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 32891192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 39153516 - 39153441
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||| |||||| || | ||||||  ||||||||||||||||||||||||||||||| ||||    
T  39153516 gaaaatgggtagaaattaggt-ttgttcatt-gtgagcttgtttaagctaatttcttgtaactcatttgtatcccttt 39153441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 29100299 - 29100172
Alignment:
Q  24 gtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcact-ttcatcttagtggattggaggactgctctc-tc 121  Q
    ||||| ||||||  ||||||||| | ||| ||||||||||||||||| ||||   ||||||||||| || ||| ||||||| |||||  |||||||| ||    
T  29100299 gtagaaattagggtttgttcttt-gtgagtttttaagctaatttcttataacctctttgtatcactctttatcatagtggaatggagagctgctctcttc 29100201  T
Q  122 cctagagtaggtcatattggaccgaactg 150  Q
    |||| ||| ||| || |||||||||||||    
T  29100200 cctatagtgggtaattttggaccgaactg 29100172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 746953 - 747007
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||| ||||||||||||||| ||| ||| ||||||| ||||||||||||||    
T  746953 tagtggatcggaggactgctctctcccccagactaggtcagattggaccgaactg 747007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 5366301 - 5366351
Alignment:
Q  54 ttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggat 104  Q
    ||||||| ||||||||||||||   ||||||||||||||||| ||||||||    
T  5366301 ttttaagataatttcttgtaacctctttgtatcactttcatcatagtggat 5366351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 6063507 - 6063453
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  6063507 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 6063453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 46860487 - 46860562
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||| ||||||||| | |||||| |  |||||||||||||||||| |||||||||| ||||    
T  46860487 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 46860562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 50494195 - 50494249
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  50494195 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 50494249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 4570007 - 4570040
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  4570007 aagctaatttcttgtaactcatttgtatctcttt 4570040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 34491225 - 34491295
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatc 86  Q
    ||||||||||||| ||||||  ||||||||| | |||||| |  |||||||||||||||||||||||||||||    
T  34491225 gaaaatgggtagaaattaggg-ttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatc 34491295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 47924007 - 47924048
Alignment:
Q  210 atgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||||||| |||||||||||||||||||| | ||||||||||    
T  47924007 atgcttgtggtgttgctctacacttagatctaggtctgtttt 47924048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 51398869 - 51398902
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  51398869 aagctaatttcttgtaactcatttgtatctcttt 51398902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 87
Target Start/End: Complemental strand, 53921616 - 53921587
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatca 87  Q
    ||||||||||||||||||||||||||||||    
T  53921616 aagctaatttcttgtaactcatttgtatca 53921587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 1e-74; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 47098773 - 47099010
Alignment:
Q  15 tgaaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactg 114  Q
    |||||||||||||| |||||| ||||||||||||  ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||    
T  47098773 tgaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctg 47098871  T
Q  115 ctctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 212  Q
    |||||||||  ||| | |||||||||||||||||||| || | || ||||||||||||||||||||||||| ||||||||||| |||||||||||||||     
T  47098872 ctctctcccccagattcggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttgattgcttatctttattgctttgattata 47098971  T
Q  213 cttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  47098972 cttgtggtgttgctctacacttagatttaggtctgtttt 47099010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 19073075 - 19072842
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| ||||||| |||||||||||  ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||  |||||    
T  19073075 aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgct 19072976  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    |||| ||| ||| |||||||||||||||||||||| ||  || ||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  19072975 ctctcccccagattaggtcatattggaccgaactgggtcaacaatctttggtgtgtttgttcctttctttcattgcttatctttattgttttgattatgc 19072876  T
Q  214 ttgtagtgttgctctacacttagatttgggtctg 247  Q
    |||| |||||||||||||||||||||| ||||||    
T  19072875 ttgtggtgttgctctacacttagatttaggtctg 19072842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 19120965 - 19120732
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| ||||||| |||||||||||  ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||  |||||    
T  19120965 aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgct 19120866  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    |||| ||| ||| |||||||||||||||||||||| ||  || ||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  19120865 ctctcccccagattaggtcatattggaccgaactgggtcaacaatctttggtgtgtttgttcctttctttcattgcttatctttattgttttgattatgc 19120766  T
Q  214 ttgtagtgttgctctacacttagatttgggtctg 247  Q
    |||| |||||||||||||||||||||| ||||||    
T  19120765 ttgtggtgttgctctacacttagatttaggtctg 19120732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 16124466 - 16124703
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  16124466 aaaatgggtagaaattaggtcttgttcttatgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 16124565  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcc-tttctttcattgcttatctatattgctttgattatgc 213  Q
    |||| ||| ||| |||||||||||||||||||||||||  || ||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||     
T  16124566 ctctcccccagattaggtcatattggaccgaactgagtcaacaatcttggtgtgtttgttccttttctttcatagcttatctttattgctttgattatgt 16124665  T
Q  214 ttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||| ||||||||||||| |||||| | ||||||||||    
T  16124666 ttgtggtgttgctctacatttagatctaggtctgtttt 16124703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 13598545 - 13598309
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||| ||||| |||| ||||||||||| ||  ||||| ||||||||||||||||| ||| |||||| |||||||||| |||||||||| ||| |||||    
T  13598545 aaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgct 13598446  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13598445 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatgct 13598346  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| ||||| |||||||||||||| | ||||||||||    
T  13598345 tgtggtgtttctctacacttagatctaggtctgtttt 13598309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 29651958 - 29651722
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| |||| ||||||||||||| || |||||| |||||||||| |||||||||||||  |||||    
T  29651958 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaattcttttgtaacactttcatcatagtggattggagtgctgct 29651859  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||| ||| |||||||||||||||||||||| ||  |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29651858 ctctcccccagattaggtcatattggaccgaactgggtcaaaaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatgct 29651759  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||| |  |||||||||    
T  29651758 tgtggtgttgctctacacttagatctaagtctgtttt 29651722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 47703886 - 47704122
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| |||||||||||||||||| || |||||| |||||||||| |||||||||||||  |||||    
T  47703886 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagagctgct 47703985  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| |||||||||||||||||||||| || | || ||||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||    
T  47703986 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgttttttcctttctttcattgcttatctttattgctttgattaaact 47704085  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||||| ||||| ||||    
T  47704086 tgtggtgttgctctacacttagatttaggtctatttt 47704122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 57 - 251
Target Start/End: Original strand, 27104362 - 27104558
Alignment:
Q  57 taagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagtta 155  Q
    ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  ||||||||||||  ||| ||||| |||||||||||||||| || |    
T  27104362 taagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattggaccgaactgtgtca 27104461  T
Q  156 cca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
     || ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  27104462 acaatcttggtgtgtttgttcctttatttcattgcttatctttattgctttgattatgcttgtggtgttgctctacacttagatttaggtctgtttt 27104558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 25 - 251
Target Start/End: Original strand, 47102800 - 47103027
Alignment:
Q  25 tagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccc- 123  Q
    |||| |||||| ||||||||||||   |||| |||| ||||||||||||||||||| ||| || |||||||||||||||||||| | ||||||||||||     
T  47102800 tagaaattaggacttgttcttttgtatgcttataagttaatttcttgtaactcatt-gtaacattttcatcttagtggattggatggctgctctctcccc 47102898  T
Q  124 tagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgt 222  Q
    |||| |||||||||||||||||||||| || | || | ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||    
T  47102899 tagattaggtcatattggaccgaactgggtcaacaattttggtgtgtttgttcctttctttgattgcttatctttattgctttgattatacttgtggtgt 47102998  T
Q  223 tgctctacacttagatttgggtctgtttt 251  Q
    |||||||||||||||||| ||||||||||    
T  47102999 tgctctacacttagatttaggtctgtttt 47103027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 9476408 - 9476173
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||| |||| |||||||||||||||| ||  ||||| |||||||||||||| |||||| ||||||  ||||||||| |||||||||||||  |||||    
T  9476408 aaaatggatagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttataactcttttgtaatactttcatcatagtggattggagagctgct 9476309  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||||||| |||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  9476308 ctctcccctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgtttatcttttttgctttgattatgct 9476209  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||  ||||  |||||||||| ||||  |||||||||    
T  9476208 tgtgatgtt-ttctacacttatatttatgtctgtttt 9476173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 79 - 251
Target Start/End: Complemental strand, 775757 - 775583
Alignment:
Q  79 tttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcc 176  Q
    |||||| ||||||||||||||||||||||||  || |||||||||  ||| ||||||||||||||||||| || || | || ||||| ||||||||||||    
T  775757 tttgtaacactttcatcttagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatcttgatgtgtttgttcc 775658  T
Q  177 tttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  775657 tttctttcattgcttatctttattgctttgattatgcttgtggtgttgctctacacttagatttaggtctgtttt 775583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 32889586 - 32889349
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgc 115  Q
    |||||||||||| |||||| ||||||||| ||  |||||  |||||| ||| ||||||||||||| ||| ||||||||||||||||||||||||  ||||    
T  32889586 aaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgc 32889488  T
Q  116 tctctccct-agagtaggtcatattggaccgaact-gagttaccatcttggtgtgtttgttcctttcttt-cattgcttatctatattgctttgattatg 212  Q
    ||| ||||  ||| ||||||||||||||||||||| ||   || |||||||||||||||||||| ||||| |||||||||||| |||||||||| ||||     
T  32889487 tctatcccccagactaggtcatattggaccgaactagatcaacaatcttggtgtgtttgttcctctcttttcattgcttatctttattgctttggttata 32889388  T
Q  213 cttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||||| |||||||||||||||||||||| | ||||||||    
T  32889387 cttgtggtgttgctctacacttagatttagatctgtttt 32889349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 26644849 - 26645066
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| |||||||||||||||| ||  |||||  |||||| ||||||||||||| |||||| |||||||||| || ||||||||||  ||||||    
T  26644849 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcataatggattggagagctgctc 26644947  T
Q  118 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||| ||| ||| |||||||||||||||||||||| || | ||   | ||||||||||||||||||||||||||||||||||| |  ||||||| ||||||    
T  26644948 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttctttcattgcttatct-ttgtgctttgtttatgc 26645046  T
Q  214 ttgtagtgttgctctacact 233  Q
    |||| |||||||||||||||    
T  26645047 ttgtggtgttgctctacact 26645066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 17 - 233
Target Start/End: Original strand, 17345470 - 17345687
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| ||||||| ||||||||| | | ||| ||| |||||||||||||| | |||||||| ||| ||||||||||||||||||||  || ||    
T  17345470 aaaatgggtagaaattaggttttgttcttt-gtgggctcttatgctaatttcttgtagcacatttgtaccacgttcatcttagtggattggagagctcct 17345568  T
Q  117 ctctccctagagtaggtcatattggaccgaactgagtt-accatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    || |||| ||||||||||||||| |||||||||| ||| |  ||| ||  ||| ||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  17345569 ctttccccagagtaggtcatattagaccgaactgggttaataatcttttatgtttttgttcatttctttcattgcttatctttatggctttgattatgct 17345668  T
Q  215 tgtagtgttgctctacact 233  Q
    | | |||||| ||||||||    
T  17345669 tatggtgttgttctacact 17345687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 18 - 232
Target Start/End: Complemental strand, 3281853 - 3281637
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| |||||||||||||||| ||  |||||  |||||| ||||||||||||| |||||| |||||||||| | |||||||||||  ||||||    
T  3281853 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatcgtggattggagagctgctc 3281755  T
Q  118 tct-ccctagagtaggtcatattggaccgaactgagt---taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||| ||| ||| |||||||||||||||||||||| ||   ||   | ||| ||||||||||||||||||||||||||||||| |  ||||||| |||| |    
T  3281754 tctcccccagattaggtcatattggaccgaactgggtcaataatcttttgatgtgtttgttcctttctttcattgcttatct-ttgtgctttgtttattc 3281656  T
Q  214 ttgtagtgttgctctacac 232  Q
    |||| ||||||||||||||    
T  3281655 ttgtggtgttgctctacac 3281637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 22819575 - 22819416
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||| |||| |||| ||||| |||||| | |||||   |||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||    
T  22819575 aaaatggttagaaattatgtcttattcttt-gtgagctaaaaagctaatttcttgtaactcatttgtatcactttcatcttggtggattggagggctact 22819477  T
Q  117 ctct--ccctagagtaggtcatattggaccgaactgagttaccatcttg-gtgtgtttgtt 174  Q
    ||||  ||| |||||||||||||||||||| || || |||||||||||| |||||||||||    
T  22819476 ctctccccccagagtaggtcatattggaccaaattgggttaccatcttgtgtgtgtttgtt 22819416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 21 - 250
Target Start/End: Original strand, 9023794 - 9024017
Alignment:
Q  21 tgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctct-c 119  Q
    |||||||| |||||||||| |||||| | ||||||||| |||||||| ||||| | |||||||||||||||||||||||||||||||||  || || |      
T  9023794 tgggtagaaattaggtcttattcttt-gtgagcttttatgctaatttattgtatcccatttgtatcactttcatcttagtggattggagagctactatat 9023892  T
Q  120 tccctagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttg-ttcctttctttcattgcttatctatattgctttgattatgcttgta 218  Q
    |||| | | |||||||||||||| ||||||  |||||||      |||||||| || ||||||| | || ||||||| |||||| ||||||||||||||     
T  9023893 tccccataataggtcatattggagcgaactaggttacca------tgtgtttgttttctttcttgc-tttcttatctttattgcattgattatgcttgtg 9023985  T
Q  219 gtgttgctctacacttagatttgggtctgttt 250  Q
    |||||||| ||||||||||||| ||| |||||    
T  9023986 gtgttgctatacacttagatttaggtatgttt 9024017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 37069912 - 37069700
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| |||||||||||||||| ||  |||||  || ||| |||   ||||||| |||||| |||||||||| |||||||| ||||   |||||    
T  37069912 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaaactatttt---gtaactc-tttgtaacactttcatcatagtggatcggagagatgctc 37069817  T
Q  118 tctccct-agagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||||||  ||| |||||||||||||||||||||| || | ||   | ||||||||||||||||||| |||| |||||||||| |  ||||||| ||||||    
T  37069816 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttatttcgttgcttatct-ttgtgctttgtttatgc 37069718  T
Q  214 ttgtagtgttgctctaca 231  Q
    |||| |||||||||||||    
T  37069717 ttgtggtgttgctctaca 37069700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 21536525 - 21536736
Alignment:
Q  22 gggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctc 121  Q
    ||||||| |||| || |||||||| ||  |||||  |||||| ||||||||||||| |||||| |||||||||  |||||||||||||  ||||||||||    
T  21536525 gggtagaaattaagtattgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcattatagtggattggagagctgctctctc 21536623  T
Q  122 cct-agagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgt 217  Q
    ||  ||| |||||||| ||  ||||||||| || | ||   | |||||||||||||||||||||||||| |||||||| |  |||||||  |||||||||    
T  21536624 ccccagattaggtcattttttaccgaactgggtcaacaatcttttggtgtgtttgttcctttctttcatcgcttatct-ttgtgctttgtctatgcttgt 21536722  T
Q  218 agtgttgctctaca 231  Q
     |||||||||||||    
T  21536723 ggtgttgctctaca 21536736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 18 - 229
Target Start/End: Original strand, 13604574 - 13604788
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||||||| |||||||||||||||| ||  || ||  ||||||  ||||||||||||| |||||| || ||||||| |||||||||||||  |||||    
T  13604574 aaatgggtagaaattaggtcttgttcttgtgtaagtttgcaagctatttttcttgtaactc-tttgtaacattttcatcatagtggattggagagctgct 13604672  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 212  Q
    |||| ||| | | |||||||||||| ||| ||||| || | ||   | |||||||||||||||| |||||||||| ||||||| ||||||||||  ||||    
T  13604673 ctctcccccatattaggtcatattgaacctaactgggtcaacaatcttttggtgtgtttgttcc-ttctttcattacttatctttattgctttgtatatg 13604771  T
Q  213 cttgtagtgttgctcta 229  Q
    |||||  ||||||||||    
T  13604772 cttgtgatgttgctcta 13604788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 50521165 - 50521271
Alignment:
Q  130 aggtcatattggaccgaactgagttacca--tctt-ggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgct 226  Q
    ||||||||||| ||||||||| |||||||  |||| |||||||||||||||||||||||||| || ||| |||||||||||||||| |||| |||||| |    
T  50521165 aggtcatattgaaccgaactgggttaccaaatctttggtgtgtttgttcctttctttcattgtttctctttattgctttgattatgtttgtggtgttgtt 50521264  T
Q  227 ctacact 233  Q
    |||||||    
T  50521265 ctacact 50521271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 40816844 - 40816918
Alignment:
Q  177 tttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||||||||||| ||||||| |||||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  40816844 tttctttcattacttatctttattgctttgattatgctcgtggtgttgctctacacttagatttaggtctgtttt 40816918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 40816765 - 40816844
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatctt 97  Q
    ||||| ||||| |||||||||||||||||||  ||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  40816765 aaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatctt 40816844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 8550942 - 8550867
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||| ||||||||| | ||||||  ||||||||||||||||||||||||||||||| ||||    
T  8550942 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgtttaagctaatttcttgtaactcatttgtatcccttt 8550867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 47179929 - 47179982
Alignment:
Q  97 tagtggattggaggactgctctctccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| |||||||||||| ||| ||||||| ||||||||||||||    
T  47179929 tagtggattggagggctgctctctccccagactaggtcagattggaccgaactg 47179982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 19358794 - 19358899
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||   |||||||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  19358794 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 19358892  T
Q  117 ctctccc 123  Q
    |||||||    
T  19358893 ctctccc 19358899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 233
Target Start/End: Original strand, 19361431 - 19361600
Alignment:
Q  65 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttacca---tc 160  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||  ||||||||| ||| | | ||||||||||| ||| |||||| || | ||   |     
T  19361431 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatatt-gactgaactgggtcaacaatctt 19361528  T
Q  161 ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 233  Q
    |||||||||||||| ||| ||||  ||||||||||   ||||||||  | ||||||| |||||||||||||||    
T  19361529 ttggtgtgtttgtt-cttccttttcttgcttatcttggttgctttgtatttgcttgtggtgttgctctacact 19361600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 233
Target Start/End: Original strand, 19380071 - 19380240
Alignment:
Q  65 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttacca---tc 160  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||  ||||||||| ||| | | ||||||||||| ||| |||||| || | ||   |     
T  19380071 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatatt-gactgaactgggtcaacaatctt 19380168  T
Q  161 ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 233  Q
    |||||||||||||| ||| ||||  ||||||||||   ||||||||  | ||||||| |||||||||||||||    
T  19380169 ttggtgtgtttgtt-cttccttttcttgcttatcttggttgctttgtatttgcttgtggtgttgctctacact 19380240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 24202720 - 24202825
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||   |||||||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  24202720 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 24202818  T
Q  117 ctctccc 123  Q
    |||||||    
T  24202819 ctctccc 24202825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 47177578 - 47177631
Alignment:
Q  97 tagtggattggaggactgctctctccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| |||||||||||| ||| ||||||| |||||| |||||||    
T  47177578 tagtggattggagggctgctctctccccagactaggtcagattggatcgaactg 47177631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 48382471 - 48382532
Alignment:
Q  57 taagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctct 118  Q
    |||| ||||||||||||||  |||||||||||||||||| || |||||||||| | ||||||    
T  48382471 taagttaatttcttgtaacctatttgtatcactttcatcatattggattggagaattgctct 48382532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 35109515 - 35109623
Alignment:
Q  45 tttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggacc 144  Q
    |||| ||||||||||||||||||||||||||  |||||||||  | | ||| ||||||||  |||  ||  |||||||  ||| |||||||| |||||||    
T  35109515 tttgtgagcttttaagctaatttcttgtaacctatttgtatctatcttatcatagtggatcagagagcttgtctctcctcagattaggtcattttggacc 35109614  T
Q  145 gaactgagt 153  Q
     ||||||||    
T  35109615 aaactgagt 35109623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 40122314 - 40122278
Alignment:
Q  55 tttaagctaatttcttgtaactcatttgtatcacttt 91  Q
    |||||||||||||||| ||||||||||||||||||||    
T  40122314 tttaagctaatttcttataactcatttgtatcacttt 40122278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 9459482 - 9459428
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  9459482 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 9459428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 9463309 - 9463255
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  9463309 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 9463255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 16226383 - 16226437
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  16226383 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 16226437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 16231779 - 16231833
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  16231779 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 16231833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 193666 - 193699
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  193666 aagctaatttcttgtaactcatttgtatctcttt 193699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 2617732 - 2617789
Alignment:
Q  97 tagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagt 153  Q
    |||||||| ||||| ||||||||||||| ||| |||||||  ||||||||||||||||    
T  2617732 tagtggatcggagggctgctctctccctcagactaggtcaatttggaccgaactgagt 2617789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 10925278 - 10925311
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  10925278 aagctaatttcttgtaactcatttgtatctcttt 10925311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 150
Target Start/End: Complemental strand, 13138014 - 13137985
Alignment:
Q  121 ccctagagtaggtcatattggaccgaactg 150  Q
    ||||||||||||||||||||||||||||||    
T  13138014 ccctagagtaggtcatattggaccgaactg 13137985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 32736947 - 32737083
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| ||||||  |||||||||   || ||||||||||||||| |||||||   |||||||||| |||||| |||| |||  |||   | ||    
T  32736947 aaaatgggtagaaattagggtttgttctttat-gaacttttaagctaattttttgtaacctctttgtatcaccttcatcatagttgatcagagagtttct 32737045  T
Q  117 ctctc-cctagagtaggtcatattggaccgaactgagt 153  Q
    ||||| || |||||||||||| ||||| ||| ||||||    
T  32737046 ctctctcccagagtaggtcattttggatcgatctgagt 32737083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 42298088 - 42298055
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  42298088 aagctaatttcttgtaactcatttgtatctcttt 42298055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 50169323 - 50169290
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  50169323 aagctaatttcttgtaactcatttgtatctcttt 50169290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 7e-73; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 10047526 - 10047303
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  10047526 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 10047427  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||| ||| |||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  10047426 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgtttatctttattgctttgattatgct 10047327  T
Q  215 tgtagtgttgctctacacttagat 238  Q
    ||| ||||||||||||||||||||    
T  10047326 tgtggtgttgctctacacttagat 10047303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 6743366 - 6743590
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||||||  |||| | |||||||||| ||||| ||| |||||| |||||||||| |||||||||||||| |||||    
T  6743366 aaaatgggtagaaattaggtcttgttcttttgtaagctat-aagctaattttttgtagctcttttgtaacactttcatcatagtggattggagggctgct 6743464  T
Q  117 ctctccc-tagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttgttcctttctttcattgcttatctatat-tgctttgattatgct 214  Q
    ||||||| |||| |||||||||||||||||||||| || | |||||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||    
T  6743465 ctctcccgtagattaggtcatattggaccgaactgggtcaacatcttggtgtgtttgttcctttcttccatttcttatctctatatgctttgattatgct 6743564  T
Q  215 tgtagtgttgctctacacttagattt 240  Q
    ||| ||||||||||||||| ||||||    
T  6743565 tgtggtgttgctctacactcagattt 6743590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 54867330 - 54867095
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| ||||||| |||||||| ||  ||||| |||||||||||||| |||||  |||||| || ||||||| |||| ||||| ||| |||||    
T  54867330 aaaatgggtagaaattaggtattgttcttgtgtaagcttataagctaatttcttataactattttgtaacattttcatcatagttgattgaagggctgct 54867231  T
Q  117 ctctccctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgctt 215  Q
    ||||||| ||| |||||||||||||||||||||| || | || ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  54867230 ctctccccagactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattactttgattatgctt 54867131  T
Q  216 gtagtgttgctctacacttagatttgggtctgtttt 251  Q
    || |||||||||||||||||||| |  |||||||||    
T  54867130 gtggtgttgctctacacttagatctatgtctgtttt 54867095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 64 - 251
Target Start/End: Complemental strand, 39246094 - 39245905
Alignment:
Q  64 atttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagttacca-tct 161  Q
    |||||||||||||| |||||| |||||||||| |||||||||||||| ||||||||||||  ||| |||||||||||||||||||||| || | || |||    
T  39246094 atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatct 39245995  T
Q  162 tggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||    
T  39245994 tggtgtgtttgttcctttctttcattgcttatctttattgttttgattatgcctgtggtgttgctctacacttagatttaggtctgtttt 39245905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 42599523 - 42599747
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||||||  ||||| |||||||||||||||||||||||| ||| || ||||||||||||||||||||||  ||||    
T  42599523 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacattttcatcttagtggattggagggttgct 42599621  T
Q  117 ctctc---cctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 212  Q
    |||||   || | | || |||||||||||| ||| || || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42599622 ctctctcccccatattatgtcatattggactgaattgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatg 42599721  T
Q  213 cttgtagtgttgctctacacttagat 238  Q
    ||||| ||||||||||||| ||||||    
T  42599722 cttgtggtgttgctctacatttagat 42599747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 38152389 - 38152625
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||| |||||| |||||||||||||||| ||  ||||| |||||||||||||| |||||| |||||| |||||||| | |||||||||||||  |||||    
T  38152389 aaaattggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttataactcttttgtaacactttcaccatagtggattggagagctgct 38152488  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||| ||| || ||||||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  38152489 ctctcccccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatct-ttgtgctttgattatgct 38152587  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttta 252  Q
    ||| |||||||| ||||||||||| | |||||||||||    
T  38152588 tgtggtgttgctatacacttagatctaggtctgtttta 38152625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 25861983 - 25862208
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||  |||||||||||||||| ||  ||||| |||||||||||||||||||           ||||||||| |||||||||||||| | |||    
T  25861983 aaaatgggtaggaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac-----------actttcatcatagtggattggagggccgct 25862071  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||| | | ||||||||||||||||||||||||| | || ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  25862072 ctcttccccatattaggtcatattggaccgaactgagtcaacaatcttggtgtgtttattcctttctttcattgcttatctttattgctttgattatgct 25862171  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  25862172 tgtggtgttgctctacacttagatttaggtctgtttt 25862208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 17 - 247
Target Start/End: Original strand, 3796469 - 3796702
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||| |||   ||||    
T  3796469 aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattagagagttgct 3796568  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    |||| ||| | | ||||||||||||||| |||||| ||  || ||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  3796569 ctctcccccatattaggtcatattggacggaactgggtcaacaatctttggtgtgtttgttcctctctttcattgcttatctttattgctttgattatgc 3796668  T
Q  214 ttgtagtgttgctctacacttagatttgggtctg 247  Q
    ||||  |||| |||||||||||||||| ||||||    
T  3796669 ttgtgatgttactctacacttagatttaggtctg 3796702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 18 - 217
Target Start/End: Original strand, 36315181 - 36315381
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| ||||||||||| |||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  36315181 aaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 36315279  T
Q  118 tctccct-agagtaggtcatattggaccgaactgagttaccat-cttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgctt 215  Q
    ||||||  ||| |||||||||||||||||||||| || | ||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  36315280 tctcccccagattaggtcatattggaccgaactgggtcaacattcttggtgtgtttgttcctttctttcattgtttatctctattgctttgattatgctt 36315379  T
Q  216 gt 217  Q
    ||    
T  36315380 gt 36315381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 18 - 217
Target Start/End: Original strand, 36329390 - 36329590
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| ||||||||||| |||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  36329390 aaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 36329488  T
Q  118 tctccct-agagtaggtcatattggaccgaactgagttaccat-cttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgctt 215  Q
    ||||||  ||| |||||||||||||||||||||| || | ||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  36329489 tctcccccagattaggtcatattggaccgaactgggtcaacattcttggtgtgtttgttcctttctttcattgtttatctctattgctttgattatgctt 36329588  T
Q  216 gt 217  Q
    ||    
T  36329589 gt 36329590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 24333957 - 24333723
Alignment:
Q  17 aaaatgggtagagattaggtcttgtt-cttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgc 115  Q
    |||||||||||| ||||||| || || ||| ||  ||||| ||||||||||| || |||||| |||||| ||| |||||| |||||||||||||  ||||    
T  24333957 aaaatgggtagaaattaggttttttttcttgtgtaagcttgtaagctaattttttataactcttttgtaacacgttcatcatagtggattggagagctgc 24333858  T
Q  116 tctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||||||||  | | ||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  24333857 tctctcccccaaattaggtcatattggaccgaactgagttaacaatcttggtgtgtttgtttctttctttcattgcttatctttattgctttgattatgc 24333758  T
Q  214 ttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||   |||||||||||||||||||| | ||||||||||    
T  24333757 tt---gtgttgctctacacttagatctaggtctgtttt 24333723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 17 - 249
Target Start/End: Complemental strand, 5147824 - 5147590
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||| ||||||||| ||  |||||  |||||| ||||||||||||  |||||| |||||||||| || |||| |||||  |||||    
T  5147824 aaaatgggtagaaattaggccttgttcttgtgtaagcttgcaagctattttcttgtaactattttgtaacactttcatcataatggactggagagctgct 5147725  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    | |||||  | | |||||||||||||||||||||| || | || ||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| |    
T  5147724 ccctcccccaaattaggtcatattggaccgaactgggtcaacaatctcggtgtgtttgttcctttctttcattgcttatctctattgttttgattatgtt 5147625  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtt 249  Q
    ||| |||||||||||||||||||||| ||||||||    
T  5147624 tgtggtgttgctctacacttagatttaggtctgtt 5147590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 7 - 174
Target Start/End: Original strand, 39774245 - 39774414
Alignment:
Q  7 gagtgagatgaaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattg 106  Q
    |||||| |||||||| |||||| |||||||||||||  |||| ||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||    
T  39774245 gagtgacatgaaaattggtagaaattaggtcttgtttctttgtgagcttttaagctaatttcttgtaacctatttgtatcactttcattttagtggattg 39774344  T
Q  107 gaggactgctctct-ccctagagtaggtcatattggaccgaactgagttaccatcttg-gtgtgtttgtt 174  Q
    |||  ||||||| | ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39774345 gagagctgctctatcccccagagtaggtcatattggaccgaactgagttaccatcttgtgtgtgtttgtt 39774414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 66 - 250
Target Start/End: Original strand, 34495822 - 34496007
Alignment:
Q  66 ttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttaccatcttgg 164  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||| ||||| ||||||||||||  |||||||||||||    
T  34495822 ttcttgtaacccatttgtatcactttcatcttagtggattggagggctgctctctcccccagagtaagtcatgttggaccgaactaggttaccatcttgg 34495921  T
Q  165 tgtgtttg-ttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgttt 250  Q
    |||||||| || |||||||||||||||| | | |||||||||||||||||||||  || |||| ||||||||| |||||| ||||||    
T  34495922 tgtgtttgttttctttctttcattgcttgt-tttattgctttgattatgcttgtgttgatgctttacacttagttttgggactgttt 34496007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 3777695 - 3777461
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| ||||| |||||||||| ||  || ||  |||||| ||||||||||||| |||||| |||||||||| |||||||||||||  || ||    
T  3777695 aaaatgggtagaaattagatcttgttcttgtgtaagtttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctact 3777597  T
Q  117 ctctcc-ctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||| ||||| ||||| |||||||||||||||| || | || ||| ||||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  3777596 ctctcctctagattaggttatattggaccgaactgggtcaacaatctcggtgtgtttgttcctttctttcattgcttatct-ttgtgctttgattatgct 3777498  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| || ||| ||||||||||||| | ||||||||||    
T  3777497 tgtggttttgttctacacttagatctaggtctgtttt 3777461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 5143406 - 5143170
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||| ||||| |||||||||||||||| ||   ||||  |||||| |||||||||| |  |||||| |||||||||| |||||| ||||||  |||||    
T  5143406 aaaatgagtagaaattaggtcttgttcttgtgtatgcttgcaagctattttcttgtaaattttttgtaacactttcatcatagtgggttggagagctgct 5143307  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| |||||||||||||||||||||  || | || |||  |||||||||||||||||||||||||||||||| ||||| |||||||||| |    
T  5143306 ctctcccccagattaggtcatattggaccgaactaggtcaacaatctcagtgtgtttgttcctttctttcattgcttatctctattgttttgattatgtt 5143207  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||| ||||||||||||||| ||||||||||    
T  5143206 tgtggtgttgttctacacttagatttaggtctgtttt 5143170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 19 - 238
Target Start/End: Original strand, 5269154 - 5269364
Alignment:
Q  19 aatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctct 118  Q
    |||||||||| |||||||||||||||| ||  ||||| |||||||||||||||||||           ||||||||| |||||||||||||| |||||||    
T  5269154 aatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac-----------actttcatcatagtggattggagggctgctct 5269242  T
Q  119 ctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttg 216  Q
    |||||  ||| |||||||||||||||||||||  || | || ||||| ||||||||||||||||||||||| ||||| | ||||||||||||||||||||    
T  5269243 ctcccccagattaggtcatattggaccgaactaggtcaacaatcttgttgtgtttgttcctttctttcatttcttatatttattgctttgattatgcttg 5269342  T
Q  217 tagtgttgctctacacttagat 238  Q
    | ||||||||||||||||||||    
T  5269343 tggtgttgctctacacttagat 5269364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 18377514 - 18377348
Alignment:
Q  9 gtgagatgaaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattgga 108  Q
    |||| ||||||||||||||| |||||| ||||||  |||| ||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| ||||    
T  18377514 gtgacatgaaaatgggtagaaattagggcttgtttctttgtgagcttttaagctgatttcttataacccatttgtatcactttcatcttagtggaatgga 18377415  T
Q  109 ggactgctctctcc-ctagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttgtt 174  Q
    || ||||||||||| | |||||||||||||| | || |||||| |||||||||||||||||||||||    
T  18377414 gggctgctctctcctccagagtaggtcatatagaactgaactgggttaccatcttggtgtgtttgtt 18377348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 5396623 - 5396840
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| |||||||||||||||| ||  |||||  |||||| ||||||||||||| |||| | |||||||||| |||||||||||||  ||||||    
T  5396623 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgcaacactttcatcatagtggattggagagctgctc 5396721  T
Q  118 tctcc-ctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||||| | ||| |||||||||||||||||||||| || | ||   | ||||||||||| ||||||||||||||||||||||| |  ||||||| ||||||    
T  5396722 tctcctccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttcttcctttctttcattgcttatct-ttgtgctttgtttatgc 5396820  T
Q  214 ttgtagtgttgctctacact 233  Q
    |||| |||||||||||||||    
T  5396821 ttgtggtgttgctctacact 5396840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 16623243 - 16623424
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| | ||||||||||||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  16623243 aaaatgggtagaaattaggtcttgttcttctgtaagcttattagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 16623342  T
Q  117 ctctcc-ctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcc-tttctttcattgcttatct 195  Q
    |||||| | ||| |||||||||||| ||||||||| ||  || ||||||||||||||||||| |||||||||||||||||||    
T  16623343 ctctcctccagattaggtcatattgaaccgaactgggtcaacaatcttggtgtgtttgttccttttctttcattgcttatct 16623424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 30 - 251
Target Start/End: Original strand, 16630643 - 16630866
Alignment:
Q  30 attaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctcc-ctagag 128  Q
    ||||| |||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  ||| ||||||| | |||     
T  16630643 attagatcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccagat 16630742  T
Q  129 taggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcc-tttctttcattgcttatctatattgctttgattatgcttgtagtgttgct 226  Q
    || ||||||||||||||||||  ||  || | ||||||||||||||||| ||||||||||||||||||| | || |||||||||||||||| ||||||||    
T  16630743 tatgtcatattggaccgaactaggtcaacaaccttggtgtgtttgttccttttctttcattgcttatctttgtt-ctttgattatgcttgtggtgttgct 16630841  T
Q  227 ctacacttagatttgggtctgtttt 251  Q
     ||||||||||| | ||| ||||||    
T  16630842 ttacacttagatctaggtttgtttt 16630866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 5112383 - 5112226
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||| |||| | ||||||||| ||| ||||  ||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||  |||||    
T  5112383 aaaataggtacaaattaggtctcgtt-ttttatgagtttttaagctaatttcttgtaacccatttgtaacactttcatattagtggattggagagctgct 5112285  T
Q  117 ctc-tccctagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttgtt 174  Q
    |||  ||| | ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  5112284 ctcacccccaaagtagatcatattggaccgaactgggttaccatcttggtgtgtttgtt 5112226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 31985585 - 31985801
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||||||| |||||| ||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  31985585 aaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 31985683  T
Q  117 ctctccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||||||| ||| |||||||||||||||||||||| || | ||   | |||||||||||||| ||| ||||| |||||||||| ||||||||||  |||||    
T  31985684 ctctccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtt-cttcctttc-ttgcttatctttattgctttgtatatgc 31985781  T
Q  214 ttgtagtgttgctctacact 233  Q
    |||| | |||||||||||||    
T  31985782 ttgtggagttgctctacact 31985801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 15 - 240
Target Start/End: Original strand, 1983249 - 1983473
Alignment:
Q  15 tgaaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactg 114  Q
    |||||| || |||| |||| || ||||||||| | ||||||  |||||||||||||||||| | ||||||||||||| ||| |||||||||||||  |||    
T  1983249 tgaaaaaggatagaaattatgttttgttcttt-gtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctagtggattggagagctg 1983347  T
Q  115 ctctctccct-agagtaggtcatattggaccgaactgagttaccatcttggtgtgtttg-ttcctttctttcattgcttatctatattgctttgattatg 212  Q
    || ||||||  | |||||||||||||||||||||||| |||||||| |||||||||||| || ||||||| | || ||||| | | ||| ||||||||||    
T  1983348 ctatctcccccatagtaggtcatattggaccgaactgggttaccatattggtgtgtttgttttctttcttgc-tttcttatat-tgttgttttgattatg 1983445  T
Q  213 cttgtagtgttgctctacacttagattt 240  Q
     |||| ||| |||| |||||||||||||    
T  1983446 tttgtggtgatgctttacacttagattt 1983473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 228
Target Start/End: Original strand, 8689498 - 8689647
Alignment:
Q  80 ttgtatcactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcc 176  Q
    ||||| |||||||||| |||||||| ||||  || ||||| ||| | | ||| ||||||||||||||||||  | | ||   | |||||||||||||| |    
T  8689498 ttgtaacactttcatcatagtggataggagagctcctctccccc-atattagatcatattggaccgaactggatcaacaatcttttggtgtgtttgttac 8689596  T
Q  177 tttctttcattgcttatctatattgctttgattatgcttgtagtgttgctct 228  Q
    ||||||||||||||||||| |  ||||||| |||||||||| ||||||||||    
T  8689597 tttctttcattgcttatct-ttgtgctttgtttatgcttgtggtgttgctct 8689647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 31474163 - 31474239
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttctttt-gagagcttttaagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| |||||||||||||||||| |||    || ||||||||||||||||||||||||||||| ||||    
T  31474163 gaaaatgggtagaaattaggtcttgttctttttgagtttgttgaagctaatttcttgtaactcatttgtatctcttt 31474239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 37782008 - 37781917
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggag 109  Q
    |||||||||||| |||| |  ||||||||| | ||| ||||||||||||||||||||||   ||||||||||||| ||  |||||||||||||    
T  37782008 aaaatgggtagaaattaagatttgttcttt-gtgagtttttaagctaatttcttgtaacctctttgtatcacttttattatagtggattggag 37781917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 233
Target Start/End: Original strand, 28468542 - 28468696
Alignment:
Q  80 ttgtatcactttcatcttagtggattggaggactgctctctcc-ctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttc 175  Q
    ||||| |||||||||| |||||||||||||  ||||||||||| | ||| ||||||||||||| | |||||| || | ||   | ||||||||||||||     
T  28468542 ttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgg-ctgaactgggtcaacaatcttttggtgtgtttgtt- 28468639  T
Q  176 ctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 233  Q
    ||| ||||| ||||||||||   ||||||||  | ||||||| |||||||||||||||    
T  28468640 cttcctttc-ttgcttatcttggttgctttgtatttgcttgtggtgttgctctacact 28468696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 18709227 - 18709173
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||    
T  18709227 tagtggattggaggactgctctctcccccagactaggtcagattggaccgaactg 18709173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 18847423 - 18847476
Alignment:
Q  97 tagtggattggaggactgctctctccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| |||||||||||| ||| |||||||  |||||||||||||    
T  18847423 tagtggattggagggctgctctctccccagactaggtcaatttggaccgaactg 18847476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 22134680 - 22134627
Alignment:
Q  97 tagtggattggaggactgctctctccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| |||||||||||| ||| |||||||  |||||||||||||    
T  22134680 tagtggattggagggctgctctctccccagactaggtcaatttggaccgaactg 22134627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 16624144 - 16624195
Alignment:
Q  200 tgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||||||||||| ||||| ||||||||||||||||| || | ||||||||||    
T  16624144 tgctttgattattcttgtggtgttgctctacacttaaatctaggtctgtttt 16624195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 21688436 - 21688475
Alignment:
Q  178 ttctttcattgcttatctatattgctttgattatgcttgt 217  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  21688436 ttctttcattgcttatctttattgctttgattatgattgt 21688475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 379393 - 379468
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||| ||||||||| | |||||| |  |||||||||||||||||| |||||||||| ||||    
T  379393 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgttgaagctaatttcttgtaacccatttgtatcgcttt 379468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 8665421 - 8665496
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||  ||||||||| |||||||| |  |||||||||||||||||| |||||||||| ||||    
T  8665421 gaaaatgggtagaaattaggg-ttgttcttt-gagagcttgttgaagctaatttcttgtaacccatttgtatctcttt 8665496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 12073405 - 12073480
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||| ||||||||| | |||||| |  |||||||||| |||||||||||||||||| ||||    
T  12073405 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgttgaagctaatttattgtaactcatttgtatctcttt 12073480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 16931852 - 16931798
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  16931852 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 16931798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 16934206 - 16934152
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  16934206 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 16934152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 22780436 - 22780382
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  22780436 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 22780382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 22782801 - 22782747
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  22782801 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 22782747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 44599901 - 44599847
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  44599901 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 44599847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 52467509 - 52467434
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||| ||||||||| | |||||| |  |||||||| ||||||||| |||||||||||||||    
T  52467509 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgttgaagctaatatcttgtaacccatttgtatcacttt 52467434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 5871834 - 5871908
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 91  Q
    |||||||||||| ||||||| ||||||||| | ||||||  |||||| ||||||||||||| ||||| |||||||||    
T  5871834 aaaatgggtagaaattaggt-ttgttcttt-gtgagcttgtttaagcaaatttcttgtaacccatttttatcacttt 5871908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 6656011 - 6656044
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  6656011 aagctaatttcttgtaactcatttgtatctcttt 6656044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 24969167 - 24969200
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  24969167 aagctaatttcttgtaactcatttgtatctcttt 24969200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 26364291 - 26364324
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  26364291 aagctaatttcttgtaactcatttgtatctcttt 26364324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 35662496 - 35662529
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  35662496 aagctaatttcttgtaactcatttgtatctcttt 35662529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 45687338 - 45687267
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatc 86  Q
    ||||||||| ||| ||||||| ||||||||| | |||||| |  ||||||||||||| |||||||||||||||    
T  45687338 gaaaatgggaagaaattaggttttgttcttt-gtgagcttgtcaaagctaatttcttataactcatttgtatc 45687267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 46147504 - 46147471
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  46147504 aagctaatttcttgtaactcatttgtatctcttt 46147471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 48893751 - 48893718
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  48893751 aagctaatttcttgtaactcatttgtatctcttt 48893718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 50673960 - 50673927
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  50673960 aagctaatttcttgtaactcatttgtatctcttt 50673927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 7e-70; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 31056191 - 31055953
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||||||  ||||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||  |||||    
T  31056191 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttattgtaactcttttgtaacactttcatcttagtggattggagagctgct 31056092  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatc-ttggtgtgtttgttcc-tttctttcattgcttatctatattgctttgattatg 212  Q
    |||| ||||||| |||||||||||| ||||||||  ||  || ||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  31056091 ctctcccctagattaggtcatattgaaccgaactaggtcaacaatctttggtgtgtttgttccttttctttcattgcttatctttattgctttgattatg 31055992  T
Q  213 cttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  31055991 cttgtggtgttgctctacacttagatttaggtctgtttt 31055953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 33118283 - 33118047
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||| ||||||||||| ||  ||||| ||||||||||||||||||||  |||||| | |||||||| |||||||||||||| |||||    
T  33118283 aaaatgggtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtaactattttgtaactctttcatcatagtggattggagggctgct 33118184  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  | | ||||||||||||||||||||||||  | || ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  33118183 ctctcccccaaattaggtcatattggaccgaactgagccaacaatcttggtgtgtttgttcctttctttcattgcttatctttattactttgattatgct 33118084  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  33118083 tgtggtgttgctctacacttagatttaggtctgtttt 33118047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 10445394 - 10445630
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  || || ||||||||||||||||||||| |||||| |||||||||  |||||||||||||  |||||    
T  10445394 aaaatgggtagaaattaggtcttgttcttgtgtaagattgtaagctaatttcttgtaactcttttgtaacactttcataatagtggattggagagctgct 10445493  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| ||||||||||||||||||||||  | | || ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  10445494 ctctcccccagattaggtcatattggaccgaactggatcaacaatcttggtgtgtttgttcctctctttcattgcttatctttattgctttgattatgct 10445593  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| || ||||||||||||||||||| ||||||||||    
T  10445594 tgtggttttgctctacacttagatttaggtctgtttt 10445630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 20522367 - 20522144
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||| ||||||||||||||  ||||| ||| ||||||||||||||| | |||||| |||||||||| ||||||||||||||  ||||    
T  20522367 aaaatgggtagaaattaagtcttgttcttttgtaagcttataatctaatttcttgtaacccttttgtaacactttcatcatagtggattggagggttgct 20522268  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  20522267 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcatttcttatctttattgctttgattatgct 20522168  T
Q  215 tgtagtgttgctctacacttagat 238  Q
    ||| ||||||||||||||||||||    
T  20522167 tgtggtgttgctctacacttagat 20522144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 39483078 - 39482842
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| || ||||||| |||||||||||||| |||||    
T  39483078 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacattttcatcatagtggattggaggcctgct 39482979  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||| | | |||||||||||||||||||||  ||  || |||||||||||||||||||| |||||||||| |||||| |||||||||| |||||||    
T  39482978 ctctcccccatattaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgttcctctctttcattgtttatctttattgctttggttatgct 39482879  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||| ||||||||||||||| ||||||||||    
T  39482878 tgtggtgttgttctacacttagatttaggtctgtttt 39482842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 33528576 - 33528807
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| ||||||||||||||||     ||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||  ||||    
T  33528576 aaaatgggtagaaattaggtcttgttctt-----agcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttgct 33528670  T
Q  117 ctctc-cctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    ||||  || | | |||||||||||||||||||||| || | || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  33528671 ctctttcccatattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgtttatctttattgctttgattatgct 33528770  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| ||||||||||||| |||||| | ||||||||||    
T  33528771 tgtggtgttgctctacatttagatctaggtctgtttt 33528807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 17865350 - 17865114
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||| |||||| |||| ||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||  ||||    
T  17865350 aaaataggtagaaattatgtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttgct 17865251  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| ||||||||||| ||| |||||| || | || |||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||    
T  17865250 ctctcccccagattaggtcatattcgactgaactgggtcaacaatcttggtgtgattgttcctttctttcattgattatctttattgctttgattatgct 17865151  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||| | ||| ||||||    
T  17865150 tgtggtgttgctctacacttagatctaggtatgtttt 17865114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 34682284 - 34682520
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||| ||||||||||| ||  ||| | ||||||||||||||||||||| |||||| |||||||||  |||||||||||||  |||||    
T  34682284 aaaatgggtagaaattaagtcttgttcttgtgtaagcctgtaagctaatttcttgtaactcttttgtaacactttcattatagtggattggagagctgct 34682383  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| || ||||||||||||||||||| || | || ||||||||||||||||||| ||||||||||||||| | ||||  ||||||||||||    
T  34682384 ctctcccccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctctctttcattgcttatatttatttgtttgattatgct 34682483  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  34682484 tgtggtgttgctctacacttagatttaggtctgtttt 34682520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 8040209 - 8039971
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactca--tttgtatcactttcatcttagtggattggaggactg 114  Q
    |||||||||||| |||||||||||||||| ||  ||||| |||||||||||||||||||||   |||||| |||||||||| |||||||||||||  |||    
T  8040209 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactctcttttgtaacactttcatcatagtggattggagagctg 8040110  T
Q  115 ctctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 212  Q
    |||||||||  ||| ||||||||||||||| |||||| || | || ||||| ||| ||| ||||| || |||||||||||||| ||||||||||||||||    
T  8040109 ctctctcccccagattaggtcatattggactgaactgggtcaacaatcttgatgtattttttcctctccttcattgcttatctttattgctttgattatg 8040010  T
Q  213 cttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  8040009 cttgtggtgttgctctacacttagatttaggtctgtttt 8039971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 17 - 246
Target Start/End: Original strand, 2869643 - 2869875
Alignment:
Q  17 aaaatgggtagagattaggtctt-gttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgc 115  Q
    |||||||||||| ||||||| || ||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  || |    
T  2869643 aaaatgggtagaaattaggtttttgttcttt-gtgagcttttaagctaatttcttgtaactcctttgtatcactttcatcttagtggattggagagctac 2869741  T
Q  116 tctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttc-ctttctttcattgcttatctatattgctttgattatg 212  Q
    ||||| |||||||||||||||||||||||||||||| ||  || || ||||||||||||||| ||| ||||  |||||||||| | ||||||||| ||||    
T  2869742 tctctcccctagagtaggtcatattggaccgaactgggtaaacaatattggtgtgtttgttctcttcctttatttgcttatctttgttgctttgaatatg 2869841  T
Q  213 cttgtagtgttgctctacacttagatttgggtct 246  Q
    ||| | |||||||||||||||||||||| |||||    
T  2869842 cttatggtgttgctctacacttagatttaggtct 2869875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 21630090 - 21629860
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||| ||||||||||| ||  ||||| ||| ||||||||||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  21630090 aaaatgggtagaaattaagtcttgttcttgtgtaagcttataaactaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 21629991  T
Q  117 ctctccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgctt 215  Q
    ||||||| ||| ||||||||||||||| |||||| ||  || |||||||||||||||||||||||||||||||||||||| |||||||||||      ||    
T  21629990 ctctccccagattaggtcatattggactgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttga-----att 21629896  T
Q  216 gtagtgttgctctacacttagatttgggtctgtttt 251  Q
    || ||| |||||||||||||||| | ||||||||||    
T  21629895 gtggtgctgctctacacttagatctaggtctgtttt 21629860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 17 - 247
Target Start/End: Original strand, 8390100 - 8390331
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| ||| || |||||||||| |||||||||||||  |||||    
T  8390100 aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttttaacactttcatcatagtggattggagagctgct 8390199  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||| | | |||||||| ||||||||||||| ||  || || ||||||||||||||| |||||||||| |||||||| |  |||||||||||||||    
T  8390200 ctctcccccaaattaggtcattttggaccgaactgggtcaacaattttggtgtgtttgttcatttctttcatcgcttatct-ttgtgctttgattatgct 8390298  T
Q  215 tgtagtgttgctctacacttagatttgggtctg 247  Q
    ||| |||||||||||||||||||| | ||||||    
T  8390299 tgtggtgttgctctacacttagatctaggtctg 8390331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 17 - 247
Target Start/End: Original strand, 14698958 - 14699176
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| | |||||||| |||||||||||||| |||||    
T  14698958 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaac-ctttcatcatagtggattggagggctgct 14699056  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||| ||| |||||||||||||||||||||| ||  || |||||||||||||||||||||||||||             |||||||||||||||||    
T  14699057 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttc-------------attgctttgattatgct 14699143  T
Q  215 tgtagtgttgctctacacttagatttgggtctg 247  Q
    ||| |||||||||||||||||||||| ||||||    
T  14699144 tgtggtgttgctctacacttagatttaggtctg 14699176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 22 - 238
Target Start/End: Complemental strand, 13569470 - 13569253
Alignment:
Q  22 gggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct- 120  Q
    ||||||| |||||||||||||||| ||  | ||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  |||||||||     
T  13569470 gggtagaaattaggtcttgttcttgtgtaaacttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctc 13569371  T
Q  121 ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtag 219  Q
    ||| ||| |||||||||||||||||||||| ||  || || ||||||||||| |||||||||||||||| |||||| |  |||||||||||||||||| |    
T  13569370 ccccagattaggtcatattggaccgaactgggtcaacaattttggtgtgtttattcctttctttcattgattatct-ttgtgctttgattatgcttgtgg 13569272  T
Q  220 tgttgctctacacttagat 238  Q
    |||| ||||| ||||||||    
T  13569271 tgtttctctatacttagat 13569253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 51 - 251
Target Start/End: Original strand, 16940193 - 16940395
Alignment:
Q  51 agcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaact 149  Q
    ||||| |||||||||||||||||| || |||||| |||||||||| |||||||||||||| ||| ||| ||||  ||| || |||||||||||||||| |    
T  16940193 agcttataagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaatt 16940292  T
Q  150 gagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgt 248  Q
    | || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||| ||||||||| | |||||||    
T  16940293 gggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatgcttttggtgtcgctctgcacttagatctaggtctgt 16940392  T
Q  249 ttt 251  Q
    |||    
T  16940393 ttt 16940395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 51 - 251
Target Start/End: Original strand, 17010858 - 17011060
Alignment:
Q  51 agcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaact 149  Q
    ||||| |||||||||||||||||| || |||||| |||||||||| |||||||||||||| ||| ||| ||||  ||| || |||||||||||||||| |    
T  17010858 agcttataagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaatt 17010957  T
Q  150 gagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgt 248  Q
    | || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||| ||||||||| | |||||||    
T  17010958 gggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatgcttttggtgtcgctctgcacttagatctaggtctgt 17011057  T
Q  249 ttt 251  Q
    |||    
T  17011058 ttt 17011060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 20 - 238
Target Start/End: Original strand, 10707205 - 10707424
Alignment:
Q  20 atgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctc 119  Q
    ||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||   || ||||    
T  10707205 atgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagttgttctc 10707304  T
Q  120 t-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgt 217  Q
    | ||| | | |||||||||||||||||||||| ||  || |||| ||||||||| ||| |||||||| |||||||||| |  |||||||||||||||||     
T  10707305 tcccccatattaggtcatattggaccgaactgggtcaacaatctcggtgtgtttattcatttctttctttgcttatct-ttgtgctttgattatgcttgc 10707403  T
Q  218 agtgttgctctacacttagat 238  Q
    |||||||||||||||||||||    
T  10707404 agtgttgctctacacttagat 10707424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 9 - 250
Target Start/End: Complemental strand, 40015080 - 40014839
Alignment:
Q  9 gtgagatgaaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattgga 108  Q
    |||| ||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  40015080 gtgacatgaaaatgagtagaaattaggtcttgttcttttgtgagtttttaagctaatttctcgcaactcatttgtatcactttcatcttagtggattgga 40014981  T
Q  109 ggactgctctctccct-agagtaggtcatattggaccgaactgagttaccatcttggtgtgtttg--ttcctttctttcattgcttatctatattgcttt 205  Q
    ||  || ||||||||| |||||| ||||||||||| | ||||| ||||||||||| || | ||||  |||||||| ||  || ||||||| | |||||||    
T  40014980 gggatgttctctccctcagagtatgtcatattggatctaactgggttaccatctt-gtatatttgttttcctttc-ttggtttcttatct-tgttgcttt 40014884  T
Q  206 gattatgcttgtagtgttgctctacacttagatttgggtctgttt 250  Q
    |||||||||||| ||| || | ||||||||| ||| || ||||||    
T  40014883 gattatgcttgtggtgatgttttacacttagttttaggactgttt 40014839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 34388997 - 34388770
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||        ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  || ||    
T  34388997 aaaatgggtagaaattaggtcttgttcttgtg--------taagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctact 34388906  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||| ||| ||||||||||||||||||| || ||  || |||| |||||||||||||||||||||| ||| |||||| |  |||||||||| ||||    
T  34388905 ctctcccccagattaggtcatattggaccgaattgggtcaacaatctcggtgtgtttgttcctttctttctttgtttatct-ttgtgctttgattttgct 34388807  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||| | ||||||||||    
T  34388806 tgtggtgttgctctacacttagatctaggtctgtttt 34388770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 23078422 - 23078657
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| |||| ||||||||||| ||  |||||  |||||| ||||||||||||| ||| || |||||||||| |||||||||||||   || ||    
T  23078422 aaatgggtagaaattaagtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttctaacactttcatcatagtggattggagagttgttc 23078520  T
Q  118 tctccct-agagtaggtcatattggaccgaactgagttaccatc---ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||||||  | | |||||||||||||| ||||||| || | |||    |||||||||||||||| |||||||||||||||||| | | |||||||||||||    
T  23078521 tctcccccatattaggtcatattggatcgaactgggtcaacattcttttggtgtgtttgttccattctttcattgcttatctttgt-gctttgattatgc 23078619  T
Q  214 ttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||| |||||||||||||||||||| | ||| ||||||    
T  23078620 ttgtggtgttgctctacacttagatctaggtatgtttt 23078657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 28259129 - 28259345
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| ||||| |||||||||| ||  |||||  |||||| ||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  28259129 aaatgggtagaaattagatcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 28259227  T
Q  118 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||| ||| | | |||||||||||||||||||||| || | ||   | |||||||||||||| | |||||||||||||||||| | || |||||  |||||    
T  28259228 tctcccccaaattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtttc-ttctttcattgcttatctttgtt-ctttgtatatgc 28259325  T
Q  214 ttgtagtgttgctctacact 233  Q
    |||| |||||||||||||||    
T  28259326 ttgtggtgttgctctacact 28259345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 17 - 235
Target Start/End: Original strand, 42039619 - 42039840
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaa-tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgc 115  Q
    |||||||||||| ||||||||||||| || ||  |||||  ||||||| ||||||||||||| || ||| |||||||||| ||||||||| |||  ||||    
T  42039619 aaaatgggtagaaattaggtcttgtttttgtgtaagcttgcaagctaattttcttgtaactc-ttcgtaacactttcatcatagtggattagagagctgc 42039717  T
Q  116 tctctccc-tagagtaggtcatattggaccgaact-gagttaccatc--ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattat 211  Q
    ||||||||  ||| ||||||||||||||||||||| ||   || |||  |||||||| ||| |||||||||||||||||||||| |  ||||||| ||||    
T  42039718 tctctcccacagattaggtcatattggaccgaactagatcaacaatcttttggtgtgcttgctcctttctttcattgcttatct-ttgtgctttgtttat 42039816  T
Q  212 gcttgtagtgttgctctacactta 235  Q
    |||||| |||||||||||||||||    
T  42039817 gcttgtggtgttgctctacactta 42039840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 2838024 - 2838114
Alignment:
Q  61 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||   |||||||| ||| ||||||||||||||||||||||||||    
T  2838024 ctaatttcttgtaactcatttgtatcactttcattttagtggattggagatgtgctctctcccccagagtaggtcatattggaccgaactg 2838114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 15903841 - 15903997
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||   ||||||||| | |||||| ||||||| ||||||||||| | ||||||||||||| |||||||||||||||||   | ||    
T  15903841 aaaatgggtagaaattagaatttgttcttt-gtgagcttgtaagcta-tttcttgtaacccctttgtatcacttttatcttagtggattggagattttct 15903938  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttaccatcttggtgtgtttgtt 174  Q
    |||||| | |||||||||||||||||| ||||||  |||||||||||||||| ||||||    
T  15903939 ctctccgtcagagtaggtcatattggatcgaactaggttaccatcttggtgtatttgtt 15903997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 36757714 - 36757931
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| ||||||| |||||||| ||  |||||  |||||  |||||| |||||| |||| | |||||||||| || ||||||||||  ||| |     
T  36757714 aaatgggtagaaattaggttttgttcttgtgtaagcttgaaagcttttttcttataactc-tttgaaacactttcatcatactggattggagagctgtta 36757812  T
Q  118 tctccct-agagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    || |||  ||| ||||||||||||||||||| || || | ||   | ||||||||||||||||||||||||||||||||||| |  ||||||| ||||||    
T  36757813 tcccccccagattaggtcatattggaccgaattgggtcaacaatcttttggtgtgtttgttcctttctttcattgcttatct-ttgtgctttgtttatgc 36757911  T
Q  214 ttgtagtgttgctctacact 233  Q
    |||| |||||||||||||||    
T  36757912 ttgtggtgttgctctacact 36757931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 35397622 - 35397433
Alignment:
Q  53 cttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctcc-ctaga-gtaggtcatattggaccgaactg 150  Q
    ||||||||||||||| | |||||   ||| |||||||||||||||||||||||| ||  ||||| ||||| | ||| |||||| | |||| |||||||||    
T  35397622 cttttaagctaattt-tcgtaacctctttatatcactttcatcttagtggattgaagagctgctatctcctccagatgtaggttagattgaaccgaactg 35397524  T
Q  151 agttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacacttagattt 240  Q
     || | || | |||||||||||||| | |||||||||||||||| |  |||||||||||||||||||| || ||||||| ||| |||||||    
T  35397523 ggtaaacaatattggtgtgtttgtttccttctttcattgcttatattgattgctttgattatgcttgtggttttgctctgcacatagattt 35397433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 60 - 174
Target Start/End: Original strand, 1345533 - 1345652
Alignment:
Q  60 gctaatttcttgtaactcatttgtatcactttcatctt-agtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttacc 157  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||| ||||   |||||||| ||| |||||||||||||||||||||||||| || | |    
T  1345533 gctaatttcttgcaactcatttgtatcactttcatcttaagtggatcggagaggtgctctctcccccagagtaggtcatattggaccgaactgggtcaac 1345632  T
Q  158 a---tcttggtgtgtttgtt 174  Q
    |   ||||||||||||||||    
T  1345633 aatttcttggtgtgtttgtt 1345652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 35 - 174
Target Start/End: Original strand, 27149263 - 27149402
Alignment:
Q  35 gtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggt 133  Q
    |||||||||||| | ||||||||||| ||||||||||| || | ||||||||||||||||  |||||||||||||  ||||||||| ||| | |||||||    
T  27149263 gtcttgttcttt-gtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggt 27149361  T
Q  134 catattggaccgaactgagttacca-tcttggtgtgtttgtt 174  Q
    ||||||||||| ||||  ||||||| |||| |||||||||||    
T  27149362 catattggaccaaacttggttaccagtctt-gtgtgtttgtt 27149402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 80 - 233
Target Start/End: Complemental strand, 40738926 - 40738773
Alignment:
Q  80 ttgtatcactttcatcttagtggattggaggactgctctctccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcc 176  Q
    ||||| |||||||||| |||||||||||||  |||||||| ||| ||| ||||||||||||| | |||||| || | ||   | |||||||||||||| |    
T  40738926 ttgtaacactttcatcatagtggattggagagctgctctccccccagattaggtcatattgg-ctgaactgggtcaacaatcttttggtgtgtttgtt-c 40738829  T
Q  177 tttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 233  Q
    || ||||| | |||||||| ||||||||||  | ||||||| |||||||||||||||    
T  40738828 ttcctttc-tagcttatctttattgctttgtatttgcttgtggtgttgctctacact 40738773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 25398641 - 25398517
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||||||| | |||| ||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  25398641 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 25398543  T
Q  117 ctct-ccctagagtaggtcatattgg 141  Q
    |||| ||| ||| |||||||||||||    
T  25398542 ctctcccccagattaggtcatattgg 25398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 25403779 - 25403655
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||||||| | |||| ||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  25403779 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 25403681  T
Q  117 ctct-ccctagagtaggtcatattgg 141  Q
    |||| ||| ||| |||||||||||||    
T  25403680 ctctcccccagattaggtcatattgg 25403655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 3491896 - 3491791
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||   |||||||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  3491896 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 3491798  T
Q  117 ctctccc 123  Q
    |||||||    
T  3491797 ctctccc 3491791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 11151746 - 11151671
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||| | ||||||||| | ||||||  |||||||||||||||||||| |||||||||||||||    
T  11151746 gaaaatgggtagaaattagat-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatcacttt 11151671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 11690514 - 11690589
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||| ||||||||| | ||||||  |||||||||||||||||||| |||||||||| ||||    
T  11690514 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 11690589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 25407768 - 25407663
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||||||| | |||| ||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  25407768 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 25407670  T
Q  117 ctctccc 123  Q
    |||||||    
T  25407669 ctctccc 25407663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 42362365 - 42362440
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||| ||||||||| | ||||||  |||||||||||||||||||| |||||||||| ||||    
T  42362365 gaaaatgggtagaaattaggt-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 42362440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 35215649 - 35215595
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  35215649 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 35215595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 35218026 - 35217972
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  35218026 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 35217972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 723894 - 723824
Alignment:
Q  21 tgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 91  Q
    |||||||| ||||||| ||||||||| | ||||||  |||||||||||||||||||| |||||||||| ||||    
T  723894 tgggtagaaattaggt-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 723824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 14633980 - 14633906
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 91  Q
    |||||||||||| ||||||  ||||||||| | ||||||  |||||||||||||||||||| |||||||||| ||||    
T  14633980 aaaatgggtagaaattagga-ttgttcttt-gtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 14633906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 28770725 - 28770781
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaa 74  Q
    |||||||||||| |||||   ||||||||| | |||||||||||||||||||||||||    
T  28770725 aaaatgggtagaaattagagtttgttcttt-gtgagcttttaagctaatttcttgtaa 28770781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 36773617 - 36773650
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  36773617 aagctaatttcttgtaactcatttgtatctcttt 36773650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 42452973 - 42453026
Alignment:
Q  97 tagtggattggaggactgctctctccctagagtaggtcatattggaccgaactg 150  Q
    |||||||| ||||| |||||||||||| ||| |||||||  |||||||||||||    
T  42452973 tagtggatcggagggctgctctctccccagactaggtcaatttggaccgaactg 42453026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 129; Significance: 3e-66; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 25 - 251
Target Start/End: Complemental strand, 10868 - 10640
Alignment:
Q  25 tagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccc 123  Q
    |||| |||||||||||||||| ||  ||||| ||| ||||||||||||||||| |||||| ||||||||||||||||||||||||  ||||||||| |||    
T  10868 tagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccc 10769  T
Q  124 tagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgt 222  Q
     | | |||||||||||||||||||||| ||  |  |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  10768 caaattaggtcatattggaccgaactgggtcaataatcttggtgtgtttgttcctctctttcattgcttatctttattgctttgattatgcttgtggtgt 10669  T
Q  223 tgctctacacttagatttgggtctgtttt 251  Q
    |||||||||||||||||| ||||||||||    
T  10668 tgctctacacttagatttaggtctgtttt 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 129; Significance: 3e-66; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 5830 - 5594
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||| ||||| |||| ||||||||||| ||  ||||| ||||||||||||||||| ||| |||||| |||||||||| |||||||||| ||| |||||    
T  5830 aaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgct 5731  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| |||||||||||||||||||||| || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5730 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatgct 5631  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| ||||| |||||||||||||| | ||||||||||    
T  5630 tgtggtgtttctctacacttagatctaggtctgtttt 5594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 2639 - 2403
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| ||||| |||||||||| ||  ||||| |||||||||||||| ||| || |||||| |||||||||| |||||||||||||| |||||    
T  2639 aaaatgggtagaaattagttcttgttcttgtgtaagcttataagctaatttcttataattcttttgtaacactttcatcatagtggattggagggctgct 2540  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
     ||||||  ||| |||||||||||||| ||||||| || | || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2539 gtctcccccagattaggtcatattggagcgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatgct 2440  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||| ||||||||||||| | ||||||||||    
T  2439 tgtggtgttgttctacacttagatctaggtctgtttt 2403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 18 - 229
Target Start/End: Original strand, 133231 - 133445
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagcta-atttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||||||| |||||||||||||||| ||  || ||  ||||||  ||||||||||||| |||||| || ||||||| |||||||||||||  |||||    
T  133231 aaatgggtagaaattaggtcttgttcttgtgtaagtttgcaagctatttttcttgtaactc-tttgtaacattttcatcatagtggattggagagctgct 133329  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 212  Q
    |||| ||| | | |||||||||||| ||| ||||| || | ||   | |||||||||||||||| |||||||||| ||||||| ||||||||||  ||||    
T  133330 ctctcccccatattaggtcatattgaacctaactgggtcaacaatcttttggtgtgtttgttcc-ttctttcattacttatctttattgctttgtatatg 133428  T
Q  213 cttgtagtgttgctcta 229  Q
    |||||  ||||||||||    
T  133429 cttgtgatgttgctcta 133445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 3e-66; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 26403180 - 26403416
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| |||||||||||| | |||||| |||||| |||||||||| |||||||||||||  |||||    
T  26403180 aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcctataactcttttgtaacactttcatcatagtggattggagagctgct 26403279  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| |||||||||||||||||||||| || | || |||||||||||||||||||   ||||||||||||||| ||||||||||||||||||    
T  26403280 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctcgttttcattgcttatctttattgctttgattatgct 26403379  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  26403380 tgtggtgttgctctacacttagatttaggtctgtttt 26403416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 23799527 - 23799763
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  23799527 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 23799626  T
Q  117 ctctcc-ctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||| | | | |||||||||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  23799627 ctctcctccaaattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttcattgcttatctctattgctttgattatgtt 23799726  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| ||  | |||||||||||||| | ||||| ||||    
T  23799727 tgtggtacttctctacacttagatctaggtctatttt 23799763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 19752344 - 19752580
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgc 115  Q
    |||||||||||| |||||| ||||||||| ||  |||||  |||||| ||| ||||||||||||| ||| ||||||||||||||||||||||||  ||||    
T  19752344 aaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgc 19752442  T
Q  116 tctctccc-tagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    |||||||| |||| |||||||||||||||||||||  || | || ||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||    
T  19752443 tctctcccctagactaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgttcctctctttcattacttatctctattgctttgattatgc 19752542  T
Q  214 ttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    |||| ||||||| |||||||||||||| ||||||||||    
T  19752543 ttgtggtgttgcactacacttagatttaggtctgtttt 19752580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 6127368 - 6127142
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||||||||||||||||||  ||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||  |||||    
T  6127368 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 6127269  T
Q  117 ctc-tccctagagtaggtcatattggaccgaactgagttacca--tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||| |||| | | ||||||||||||||||||||||||| | ||    ||| ||||||||||| | ||||||||||||||||| || ||||||||||||||    
T  6127268 ctcttccccaaattaggtcatattggaccgaactgagtcaacaatatttgatgtgtttgttcatctctttcattgcttatctttagtgctttgattatgc 6127169  T
Q  214 ttgtagtgttgctctacacttagattt 240  Q
    |||| ||||||||||||||||| ||||    
T  6127168 ttgtggtgttgctctacacttaaattt 6127142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 5702433 - 5702669
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| ||||||| ||| |||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| ||| ||||||||||  ||||    
T  5702433 aaaatgggtagaaattaggttttgctcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcataggggattggagggatgct 5702532  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  | | |||||||||||||||||||||| || | || |||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||    
T  5702533 ctctcccccatattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttccttcatagcttatctctattgctttaattatgct 5702632  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| ||| |||||||||||||||| | ||||||||||    
T  5702633 tgtggtgatgctctacacttagatctaggtctgtttt 5702669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 4696557 - 4696782
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| ||||||||||||||||  |  ||||| |||||||||||||||||||||           ||||||| |||||||||||||| |||||    
T  4696557 aaaatgggtagaaattaggtcttgttcttgcgtaagcttataagctaatttcttgtaactc-----------tttcatcatagtggattggagggctgct 4696645  T
Q  117 ctctccct-agagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||||  ||| |||||||||||||| ||||||| || | || ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |    
T  4696646 ctctcccccagattaggtcatattggatcgaactgggtcaacaatcttggtgtgtttgttcatttctttcattgcttatctttattgctttgattatgtt 4696745  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| ||||||||||||||||||||||  |||||||||    
T  4696746 tgtggtgttgctctacacttagatttatgtctgtttt 4696782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 17 - 233
Target Start/End: Complemental strand, 6813830 - 6813611
Alignment:
Q  17 aaaatgggtagaga-ttaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgc 115  Q
    |||||||||||| | |||||| ||||||||| | ||||||  |||||||||||||||||| | ||||| |||||||||||||| ||||||||||  ||||    
T  6813830 aaaatgggtagaaaattaggttttgttcttt-gtgagcttgcaagctaatttcttgtaacccctttgtgtcactttcatcttattggattggagagctgc 6813732  T
Q  116 tctctccc-tagagtaggtcatattggaccgaactgagttacca-tctt-ggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 212  Q
    |||||||| ||| |||||| |||||||||||||||| |||| || |||| ||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  6813731 tctctcccctagtgtaggttatattggaccgaactgggttaacaatctttggtatgtttgttcctttctttcatttcttatctttattgctttgattatg 6813632  T
Q  213 cttgtagtgttgctctacact 233  Q
    |||||  ||||| ||||||||    
T  6813631 cttgtgatgttgttctacact 6813611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 97 - 251
Target Start/End: Original strand, 9765849 - 9766006
Alignment:
Q  97 tagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagttacca-tc-ttggtgtgtttgttcctttctttcattgcttat 193  Q
    |||||||||||||  ||||||||||||  ||| |||||||||||||||||||||| || | || || |||||||||||||||| ||||||||||||||||    
T  9765849 tagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcattggtgtgtttgttcccttctttcattgcttat 9765948  T
Q  194 ctatattgctttgattatgcttgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    || ||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||    
T  9765949 ctttattgctttgattatgcttgtggtgttgctctacacttagatttaggtttgtttt 9766006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 4456173 - 4455956
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| |||| ||||||||||| ||  |||||   ||||| ||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  4456173 aaatgggtagaaattatgtcttgttcttgtgtaagcttgccagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 4456075  T
Q  118 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||| ||| ||| |||| ||||||||||||||| | || | ||   | ||||||||||||||||||||||||||||||||||| |  ||||||| ||||||    
T  4456074 tctcccccagattaggccatattggaccgaaccgggtcagcaatcttttggtgtgtttgttcctttctttcattgcttatct-ttgtgctttgtttatgc 4455976  T
Q  214 ttgtagtgttgctctacact 233  Q
    |||| |||||||||||||||    
T  4455975 ttgttgtgttgctctacact 4455956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 17 - 223
Target Start/End: Original strand, 9054788 - 9054995
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| ||||| | ||||||||| | | ||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||  |||||    
T  9054788 aaaatgggtagaaattagattttgttcttt-gtgcgcttttaagctaatttcttgtaaccactttgtatcactttcatcttagtggattagagagctgct 9054886  T
Q  117 ctctcc-ctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||||| | ||||||||||||||||||| |||| ||||  |  || |||||||||||| |   |||||||||  ||||||| ||||||||||||||| ||    
T  9054887 ctctcctccagagtaggtcatattggactgaacagagtaaataatattggtgtgtttgattgcttctttcatgacttatctttattgctttgattatact 9054986  T
Q  215 tgtagtgtt 223  Q
    ||| |||||    
T  9054987 tgtggtgtt 9054995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 7412486 - 7412269
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| |||||||||||||||| ||  |||||  ||| || ||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  7412486 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 7412388  T
Q  118 tct-ccctagagtaggtcatattggaccgaactgagttacca----tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatg 212  Q
    ||| ||| | | |||||||||||||||||||||| || | ||    || ||||||||||||||| |||||||||||||||||| | || |||||  ||||    
T  7412387 tctcccccatattaggtcatattggaccgaactgggtcaacaattttcatggtgtgtttgttcc-ttctttcattgcttatctttgtt-ctttgtatatg 7412290  T
Q  213 cttgtagtgttgctctacact 233  Q
    ||||| |||||||||||||||    
T  7412289 cttgtggtgttgctctacact 7412269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 28307707 - 28307484
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaag-ctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||| ||||| | |||||||||||||||   ||||||||||  ||||||||||||||| ||| ||||| |||| ||||||||||||||||||  |||||    
T  28307707 aaatgtgtagaaagtaggtcttgttctttat-gagcttttaaaactaatttcttgtaacccatgtgtattacttccatcttagtggattggagagctgct 28307609  T
Q  117 ctc-tccctagagtaggtcatattggaccgaactgagttacc-atcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    ||| |||| |||||||||||| ||||||||||||| |||||| ||||||| |||||| || | ||||| | || ||||| | |||||||||| |||||||    
T  28307608 ctcatccccagagtaggtcattttggaccgaactgggttaccaatcttggcgtgtttatttcattcttgc-tttcttatatttattgctttgtttatgct 28307510  T
Q  215 tgtagtgttgctctacacttagattt 240  Q
    ||| ||| || | |||||||||||||    
T  28307509 tgtggtgctgttatacacttagattt 28307484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 3051266 - 3051097
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| |||| || ||||||||| | ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||    
T  3051266 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 3051168  T
Q  117 ctctcc-ctagagtaggtcatattggaccgaactgagttac-catc-ttggtgtgtttgttcctttctttc 184  Q
    |||||| | |||| |||| ||||| ||||||| || |||||  ||| ||||||||||||||  ||||||||    
T  3051167 ctctcctccagaggaggttatattagaccgaattgggttactaatctttggtgtgtttgttgttttctttc 3051097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 65 - 233
Target Start/End: Original strand, 19175753 - 19175923
Alignment:
Q  65 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagttacca---tc 160  Q
    ||||||||||||| |||||| |||||||||| |||||||||||||   |||||||||||  ||| |||||||||||||||||||||  || | ||   |     
T  19175753 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 19175851  T
Q  161 ttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgtagtgttgctctacact 233  Q
    || |||||||||||||||||||||||||||||||| |  ||||||| |||||||||| |||||||||||||||    
T  19175852 tttgtgtgtttgttcctttctttcattgcttatct-ttgtgctttgtttatgcttgtggtgttgctctacact 19175923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 31071180 - 31071398
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||||||||| | |||| ||||||||| ||  |||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||||||  |||||    
T  31071180 aaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 31071278  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagttacca----tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattat 211  Q
    |||| ||| ||| |||||||||||||||||||||  || | ||    | |||||||||||||| ||| ||||| ||||||||||   ||||||||  | |    
T  31071279 ctctcccccagattaggtcatattggaccgaactcggtcaacaatctttttggtgtgtttgtt-cttcctttc-ttgcttatcttggttgctttgtattt 31071376  T
Q  212 gcttgtagtgttgctctacact 233  Q
    |||||| |||||||||||||||    
T  31071377 gcttgtggtgttgctctacact 31071398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 246
Target Start/End: Original strand, 5990539 - 5990742
Alignment:
Q  45 tttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggac 143  Q
    |||| ||||||||||||||||||||||||||   ||||||||||||||||||||||  |||||||  | ||||||| ||| | | || ||||||||||||    
T  5990539 tttgtgagcttttaagctaatttcttgtaacatctttgtatcactttcatcttagt-aattggagagccgctctctcccccacaatatgtcatattggac 5990637  T
Q  144 cgaactgagttacc-atcttggtgtgtttg--ttcctttctttcattgcttatctatattgc-tttgattatgcttgtagtgttgctctacacttagatt 239  Q
    | ||||  |||||| |||||| |||| |||  || | ||||| | |||||||||| | |||| ||||| ||||||||| || ||| ||||||||||||||    
T  5990638 caaact-tgttaccaatcttgttgtgcttgtttttcattcttgc-ttgcttatctttgttgcttttgaatatgcttgtggttttgttctacacttagatt 5990735  T
Q  240 tgggtct 246  Q
    | |||||    
T  5990736 taggtct 5990742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 30291619 - 30291695
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| ||||||| ||||||||| | |||||| |  ||||||||||||||||||||||||||||||||||    
T  30291619 gaaaatgggtagaaattaggttttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatcacttt 30291695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 7493130 - 7493212
Alignment:
Q  23 ggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattg 106  Q
    |||||| ||||||| ||||||| | | ||||||||| | ||||||||| |||||  ||||||||||||||||||||||||||||    
T  7493130 ggtagaaattaggttttgttctgt-gtgagcttttatgttaatttcttataacttctttgtatcactttcatcttagtggattg 7493212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 4162502 - 4162585
Alignment:
Q  8 agtgagatgaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||| |||||||||||||  |||||| ||||||||| |||| ||| |  ||||||||||||||||||||||||||||| ||||    
T  4162502 agtgagaggaaaatgggtagaagttaggt-ttgttcttt-gagaacttgttgaagctaatttcttgtaactcatttgtatctcttt 4162585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 1261953 - 1262029
Alignment:
Q  65 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattgg 141  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||  ||||||||| ||| ||| |||||||||||||    
T  1261953 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 1262029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 18141833 - 18141908
Alignment:
Q  15 tgaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 91  Q
    |||||||||||||| |||||||  |||||||| | |||||| |  |||||||||||||||||| |||||||||||||||    
T  18141833 tgaaaatgggtagaaattaggt--tgttcttt-gtgagcttgttgaagctaatttcttgtaacccatttgtatcacttt 18141908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 1292618 - 1292543
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctttt--aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| |||| || ||||||||| | |||||| |  ||||||||||||||||||||||||||||| ||||    
T  1292618 gaaaatgggtagaaattaagt-ttgttcttt-gtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 1292543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 3303825 - 3303750
Alignment:
Q  16 gaaaatgggtagagattaggtcttgttcttttgagagctt--ttaagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||| |||| || ||||||||| | ||||||  |||| |||||||||||||||||||||||||| ||||    
T  3303825 gaaaatgggtagaaattaagt-ttgttcttt-gtgagcttgtttaacctaatttcttgtaactcatttgtatctcttt 3303750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 85
Target Start/End: Original strand, 3772244 - 3772274
Alignment:
Q  55 tttaagctaatttcttgtaactcatttgtat 85  Q
    |||||||||||||||||||||||||||||||    
T  3772244 tttaagctaatttcttgtaactcatttgtat 3772274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 43079874 - 43079928
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  43079874 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 43079928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 43082245 - 43082299
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  43082245 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 43082299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 10015136 - 10015169
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  10015136 aagctaatttcttgtaactcatttgtatctcttt 10015169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 11384040 - 11384073
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  11384040 aagctaatttcttgtaactcatttgtatctcttt 11384073  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 28283283 - 28283230
Alignment:
Q  97 tagtggattggaggactgctctctccctagagtaggtcatattggaccgaactg 150  Q
    |||||||| ||||| |||||||||||| ||| |||||||  |||||||||||||    
T  28283283 tagtggatcggagggctgctctctccccagactaggtcaatttggaccgaactg 28283230  T

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Target: scaffold0176 (Bit Score: 105; Significance: 5e-52; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 17410 - 17174
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    ||||| |||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||| |||||| |||||||||| || |||||||||||  ||||    
T  17410 aaaataggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcataatggattggagggttgct 17311  T
Q  117 ctctc-cctagagtaggtcatattggaccgaactgagttacca-tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    ||||  || | | |||||||||||| ||||||||| || | || | |||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||    
T  17310 ctctttcccatattaggtcatattgaaccgaactgggtcaacaattttggtgtgtttgctcctttctttcatttcttatctttattgctttaattatgct 17211  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttt 251  Q
    ||| ||||||||||| |||||||||| ||| ||||||    
T  17210 tgtggtgttgctctatacttagatttaggtatgtttt 17174  T

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Target: scaffold0176; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 18116 - 18083
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  18116 aagctaatttcttgtaactcatttgtatctcttt 18083  T

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Target: scaffold0036 (Bit Score: 98; Significance: 8e-48; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 85829 - 85594
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgct 116  Q
    |||||||||||| ||||||||||| |||| ||  ||||||||||||||||||||||||||| |||||| |||||||||| | |||||||||||  | |||    
T  85829 aaaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatggtggattggagagccgct 85731  T
Q  117 ctct-ccctagagtaggtcatattggaccgaactgagt-taccatcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgct 214  Q
    |||| ||| ||| ||||||||||||||| |||||| ||  || |||| | ||||||||||| ||||||||||||||||||| |  ||||||| |||||||    
T  85730 ctctcccccagattaggtcatattggactgaactgggtcaacaatctagatgtgtttgttcttttctttcattgcttatct-ttgtgctttggttatgct 85632  T
Q  215 tgtagtgttgctctacacttagatttgggtctgtttta 252  Q
    |||  ||||||||||||||||||| | |||||||||||    
T  85631 tgtgatgttgctctacacttagatctaggtctgtttta 85594  T

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Target: scaffold0087 (Bit Score: 82; Significance: 3e-38; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 43913 - 44129
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| |||||||||||||||| |   |||||  |||||| ||||||||||||| |||||| |||||||||| |||||||||||||  ||||||    
T  43913 aaatgggtagaaattaggtcttgttcttgtataagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 44011  T
Q  118 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||| ||| ||| ||| |||||||||||||||||| || | ||   | |||||||||||||||| |||||||||||||||||| | || ||||| ||||||    
T  44012 tctcccccagaatagatcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcc-ttctttcattgcttatctttgtt-ctttgtttatgc 44109  T
Q  214 ttgtagtgttgctctacact 233  Q
    |||| |||||||||||||||    
T  44110 ttgtggtgttgctctacact 44129  T

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Target: scaffold0087; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 36784 - 37000
Alignment:
Q  18 aaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctc 117  Q
    ||||||||||| || | ||||||||||| ||  |||||  |||||| ||||||||||||| |||||| |||||||||| |||||| |||| |  ||||||    
T  36784 aaatgggtagaaatcatgtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtgggttggcgagctgctc 36882  T
Q  118 tct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgc 213  Q
    ||| ||||||| |||||||||||||||||||||| || | ||   | ||||||||||||||||||||||| ||||||||||| |  ||||||| |||| |    
T  36883 tcttccctagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttcttttattgcttatct-ttgtgctttgtttatac 36981  T
Q  214 ttgtagtgttgctctacac 232  Q
    |||| |||||| |||||||    
T  36982 ttgtggtgttggtctacac 37000  T

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Target: scaffold0140 (Bit Score: 77; Significance: 3e-35; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 8376 - 8588
Alignment:
Q  24 gtagagattaggtcttgttcttttgagagcttttaagctaattt-cttgtaactcatttgtatcactttcatcttagtggattggaggactgctctct-c 121  Q
    ||||| |||||||||||||||| ||  |||||  |||||| ||| |||||||||| |||||| |||||||||| |||||||||||||  ||||||||| |    
T  8376 gtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcc 8474  T
Q  122 cctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttctttcattgcttatctatattgctttgattatgcttgta 218  Q
    || ||| |||||||||||||||||||||| || | ||   | |||||||||||||| | |||||||||||||||||| ||||| |||| |||| |||||     
T  8475 cccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtttc-ttctttcattgcttatctttattgttttggttatacttgtg 8573  T
Q  219 gtgttgctctacact 233  Q
    |||||||||||||||    
T  8574 gtgttgctctacact 8588  T

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Target: scaffold0078 (Bit Score: 59; Significance: 2e-24; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 14 - 236
Target Start/End: Complemental strand, 23681 - 23455
Alignment:
Q  14 atgaaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactca----tttgtatcactttcatcttagtggattggag 109  Q
    ||||||||||||||| ||||| ||||||| ||||| |||||| ||||  |||||||||||| | |    ||||||||||||||||||||||| ||||||     
T  23681 atgaaaatgggtagaaattagatcttgtt-ttttgtgagcttctaagaaaatttcttgtaattaacctatttgtatcactttcatcttagtgaattggat 23583  T
Q  110 gactgctctctccc-tagagtaggtcatattggaccgaactgagttaccatcttggtgtgtttg-ttcctttctttcattgcttatctatattgctttga 207  Q
      || || |||||| || |||||||||||||||||||||||  |||||||||||||| |||||| || ||||||| | || ||||||| | ||||||| |    
T  23582 agcttctttctcccctaaagtaggtcatattggaccgaactaggttaccatcttggt-tgtttgttttctttcttgc-tttcttatct-tgttgctttaa 23486  T
Q  208 t--tatgcttgtagtgttgctctacacttag 236  Q
    |  ||||||||| |||||||| |||||||||    
T  23485 ttatatgcttgtggtgttgctttacacttag 23455  T

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Target: scaffold0078; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 43338 - 43274
Alignment:
Q  80 ttgtatcactttcatcttagtggattggaggactgctctctcc-ctagagtaggtcatattggac 143  Q
    |||||||||||||||||||||||||| ||| | || ||||||| |||||||||||||||||||||    
T  43338 ttgtatcactttcatcttagtggattagagaattgttctctcctctagagtaggtcatattggac 43274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 88 - 233
Target Start/End: Complemental strand, 45329 - 45182
Alignment:
Q  88 ctttcatcttagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactgagttacca---tcttggtgtgtttgttcctttcttt 183  Q
    |||||||| |||||||||||||  ||||||||| ||| ||| |||||||||||| |||||||||||| | ||   | |||||||||||||| | ||||||    
T  45329 ctttcatcatagtggattggagagctgctctctcccccagattaggtcatattgaaccgaactgagtcaacaatcttttggtgtgtttgtt-cattcttt 45231  T
Q  184 cattgcttatctatattgctttgattatgcttgtagtgttgctctacact 233  Q
    |||||||||||| | || |||||  |||| |||| |||||||||||||||    
T  45230 cattgcttatctttgtt-ctttgtatatgtttgtggtgttgctctacact 45182  T

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Target: scaffold0184 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 29506 - 29570
Alignment:
Q  80 ttgtatcactttcatcttagtggattggaggactgctctctcc-ctagagtaggtcatattggac 143  Q
    |||||||||||||||||||||||||| ||| | || ||||||| |||||||||||||||||||||    
T  29506 ttgtatcactttcatcttagtggattagagaattgttctctcctctagagtaggtcatattggac 29570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 102445 - 102516
Alignment:
Q  17 aaaatgggtagagattaggtcttgttcttttgagagcttttaagctaatttcttgtaactcatttgtatcact 89  Q
    |||||||||||| ||||||  ||||| ||||| ||||||||||| ||||||||||||||   |||||||||||    
T  102445 aaaatgggtagaaattagggtttgtt-ttttgtgagcttttaagataatttcttgtaacctctttgtatcact 102516  T

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Target: scaffold0267 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 266 - 320
Alignment:
Q  97 tagtggattggaggactgctctct-ccctagagtaggtcatattggaccgaactg 150  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||    
T  266 tagtggattggagggctgctctctcccccagactaggtcagattggaccgaactg 320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 31; Significance: 0.00000008; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 17951 - 18008
Alignment:
Q  65 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccc 123  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||  ||||||||||||    
T  17951 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctccc 18008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 24044 - 24101
Alignment:
Q  65 tttcttgtaactcatttgtatcactttcatcttagtggattggaggactgctctctccc 123  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||  ||||||||||||    
T  24044 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctccc 24101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 6424 - 6481
Alignment:
Q  97 tagtggattggaggactgctctctccct-agagtaggtcatattggaccgaactgagt 153  Q
    |||||||| ||||| ||||||||||||  ||| ||||||| |||||||||||||||||    
T  6424 tagtggatcggagggctgctctctcccccagactaggtcagattggaccgaactgagt 6481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 11612 - 11645
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  11612 aagctaatttcttgtaactcatttgtatctcttt 11645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 27556 - 27523
Alignment:
Q  58 aagctaatttcttgtaactcatttgtatcacttt 91  Q
    ||||||||||||||||||||||||||||| ||||    
T  27556 aagctaatttcttgtaactcatttgtatctcttt 27523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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