View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7750_high_37 (Length: 311)
Name: NF7750_high_37
Description: NF7750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7750_high_37 |
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Alignment Details
Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 20 - 298
Target Start/End: Original strand, 32346325 - 32346603
Alignment:
| Q |
20 |
atctttatccagctagtagaacacaacaagaagtaaaagacactatataatcaattctagtcagcatacaaaattagttagaaaaagtaaatttagaagc |
119 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
32346325 |
atctttatccagctagtagaacacaacaagaagtaaaagacactatataatcaattctagtcagcatacaaaattagttaggaaaagtaaatttagaagc |
32346424 |
T |
|
| Q |
120 |
attcatcttgtcaaagaatcagctctgtaaagcatagtgaatgaaagcattatccgtagctctaatcttcggtactacnnnnnnngcatctaatatattg |
219 |
Q |
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| T |
32346425 |
attcatcttgtcaaagaatcagctctggaaagcatagtgaatgaaagcattatctgtagctctaatcttcggtactacaaaaaaagcatctaacatattg |
32346524 |
T |
|
| Q |
220 |
gtaaacaagcatatgtccaagatatttattaaacatatgataaagtttatgacgaatcaagtgtctcacagtttcatct |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |
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| T |
32346525 |
gtaaacaagcatatgtccaagatatttattaaacatatgatagagtttatgacgaatcaagtgtctcacagttccatct |
32346603 |
T |
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