View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7750_high_61 (Length: 228)
Name: NF7750_high_61
Description: NF7750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7750_high_61 |
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Alignment Details
Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 3530852 - 3531068
Alignment:
| Q |
1 |
agtgcacttaatcgtatgagatacacatttgttttgtacgttaaatacatataaagagatgtatttgnnnnnnnagaggaagagatgtattagtattgac |
100 |
Q |
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| T |
3530852 |
agtgcacttaatcgtatgagatacacatttgttttgtacgttaaatgcatataaagagatgtatttgtttctttagaggaagagatgtattagtattgac |
3530951 |
T |
|
| Q |
101 |
aatggaaaacgcatacaatattttaaaaatatgtatcaagccatttgtaatttataggaattcaggtattaagtatttaatttatttaatgtgatgatag |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
3530952 |
aatggaaaacgcatacaatattttaaaaatatgtatcaagccatttgtaatttataggaattcaggtattaagtatttaatttatttaatgtgatgatag |
3531051 |
T |
|
| Q |
201 |
taaaactttataatatt |
217 |
Q |
| |
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||||||||||||||||| |
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|
| T |
3531052 |
taaaactttataatatt |
3531068 |
T |
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