View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7750_low_13 (Length: 476)

Name: NF7750_low_13
Description: NF7750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7750_low_13
NF7750_low_13
[»] chr3 (35 HSPs)
chr3 (18-313)||(38666776-38667071)
chr3 (384-446)||(18405763-18405825)
chr3 (369-427)||(25447162-25447220)
chr3 (369-451)||(39980800-39980882)
chr3 (383-451)||(31365119-31365187)
chr3 (370-445)||(42799884-42799960)
chr3 (383-450)||(584118-584185)
chr3 (383-456)||(22667468-22667542)
chr3 (383-456)||(22724107-22724181)
chr3 (394-456)||(37389249-37389311)
chr3 (387-451)||(3776325-3776390)
chr3 (383-456)||(21367733-21367806)
chr3 (383-420)||(33405123-33405160)
chr3 (383-456)||(34610737-34610810)
chr3 (383-451)||(24085269-24085337)
chr3 (371-451)||(24684741-24684821)
chr3 (383-451)||(31365240-31365308)
chr3 (383-451)||(51929288-51929356)
chr3 (385-456)||(402475-402546)
chr3 (383-422)||(5448544-5448583)
chr3 (383-414)||(26911699-26911730)
chr3 (387-433)||(3845498-3845544)
chr3 (370-443)||(20170632-20170706)
chr3 (370-456)||(22203496-22203581)
chr3 (383-445)||(42747713-42747775)
chr3 (383-456)||(5436138-5436211)
chr3 (383-456)||(26878266-26878339)
chr3 (386-451)||(30443964-30444029)
chr3 (383-456)||(34235024-34235097)
chr3 (383-456)||(46031056-46031129)
chr3 (371-455)||(50211801-50211886)
chr3 (395-451)||(53789406-53789460)
chr3 (383-451)||(9832686-9832754)
chr3 (370-418)||(16072959-16073007)
chr3 (383-427)||(36783283-36783327)
[»] chr5 (22 HSPs)
chr5 (314-458)||(35445706-35445850)
chr5 (370-456)||(10640019-10640105)
chr5 (384-456)||(11064732-11064804)
chr5 (383-450)||(9107162-9107229)
chr5 (383-456)||(11700228-11700301)
chr5 (370-451)||(16937801-16937882)
chr5 (383-443)||(15015922-15015982)
chr5 (370-445)||(32010022-32010097)
chr5 (370-451)||(7705916-7705997)
chr5 (383-427)||(12425668-12425712)
chr5 (369-433)||(42569530-42569593)
chr5 (397-456)||(32942660-32942719)
chr5 (370-433)||(42568948-42569011)
chr5 (369-446)||(32941545-32941623)
chr5 (383-456)||(39105530-39105604)
chr5 (383-448)||(39594881-39594946)
chr5 (383-456)||(41419385-41419458)
chr5 (398-427)||(42500189-42500218)
chr5 (384-456)||(15246899-15246971)
chr5 (385-449)||(32009766-32009830)
chr5 (383-427)||(40426860-40426904)
chr5 (383-451)||(41534509-41534577)
[»] chr1 (31 HSPs)
chr1 (374-451)||(38001666-38001743)
chr1 (383-451)||(2295167-2295235)
chr1 (383-447)||(24334270-24334334)
chr1 (383-449)||(37617396-37617462)
chr1 (383-451)||(6557043-6557111)
chr1 (384-456)||(7941672-7941744)
chr1 (383-451)||(29904822-29904890)
chr1 (383-443)||(39976141-39976201)
chr1 (369-440)||(33204311-33204382)
chr1 (383-451)||(13810069-13810137)
chr1 (383-450)||(50644186-50644253)
chr1 (369-455)||(3233932-3234018)
chr1 (370-456)||(36514594-36514680)
chr1 (383-456)||(10233579-10233652)
chr1 (405-458)||(14443512-14443565)
chr1 (383-451)||(49938818-49938886)
chr1 (400-451)||(9572049-9572100)
chr1 (384-451)||(38247398-38247465)
chr1 (405-451)||(7119891-7119937)
chr1 (385-451)||(7244587-7244652)
chr1 (389-427)||(30192038-30192076)
chr1 (383-421)||(38116008-38116046)
chr1 (383-456)||(1432581-1432654)
chr1 (389-422)||(1684036-1684069)
chr1 (370-427)||(2295286-2295343)
chr1 (413-458)||(4445771-4445816)
chr1 (374-427)||(15784412-15784465)
chr1 (382-451)||(37517096-37517165)
chr1 (383-451)||(5720996-5721064)
chr1 (383-451)||(6102225-6102292)
chr1 (384-456)||(43990323-43990395)
[»] chr7 (28 HSPs)
chr7 (383-451)||(19302494-19302562)
chr7 (383-449)||(27863656-27863722)
chr7 (384-451)||(33601342-33601409)
chr7 (368-443)||(31744881-31744956)
chr7 (383-445)||(33266417-33266479)
chr7 (370-420)||(44822060-44822110)
chr7 (370-451)||(4970710-4970791)
chr7 (394-451)||(19022527-19022584)
chr7 (383-456)||(20526512-20526585)
chr7 (383-451)||(46280211-46280282)
chr7 (390-455)||(48140270-48140335)
chr7 (373-445)||(3927931-3928003)
chr7 (383-458)||(8094369-8094445)
chr7 (384-440)||(18765366-18765422)
chr7 (383-451)||(48470115-48470183)
chr7 (388-451)||(33601963-33602026)
chr7 (383-437)||(9210906-9210960)
chr7 (409-455)||(27288014-27288060)
chr7 (394-456)||(33678846-33678908)
chr7 (383-456)||(34035983-34036056)
chr7 (384-456)||(41040230-41040303)
chr7 (383-451)||(17944274-17944342)
chr7 (384-448)||(21196342-21196406)
chr7 (411-455)||(21568454-21568498)
chr7 (383-411)||(24048651-24048679)
chr7 (383-458)||(25670517-25670593)
chr7 (383-443)||(33287919-33287979)
chr7 (370-445)||(45593605-45593681)
[»] chr4 (34 HSPs)
chr4 (387-451)||(1706693-1706757)
chr4 (370-456)||(17822783-17822869)
chr4 (370-451)||(55437147-55437228)
chr4 (383-451)||(15173234-15173302)
chr4 (383-451)||(39691080-39691148)
chr4 (370-450)||(49940085-49940165)
chr4 (384-451)||(21731588-21731655)
chr4 (369-451)||(27043747-27043829)
chr4 (384-446)||(40174633-40174695)
chr4 (383-456)||(24169329-24169402)
chr4 (383-456)||(52315128-52315201)
chr4 (370-451)||(54426114-54426195)
chr4 (369-456)||(13126493-13126580)
chr4 (390-451)||(2244122-2244183)
chr4 (383-420)||(41336862-41336899)
chr4 (370-451)||(42403941-42404021)
chr4 (383-451)||(25904154-25904222)
chr4 (383-451)||(29657455-29657523)
chr4 (383-443)||(49003973-49004033)
chr4 (416-458)||(1408285-1408327)
chr4 (370-412)||(25571369-25571411)
chr4 (371-428)||(55870261-55870319)
chr4 (370-451)||(26783-26864)
chr4 (402-455)||(4304100-4304153)
chr4 (370-451)||(18815094-18815175)
chr4 (391-456)||(20719769-20719834)
chr4 (394-427)||(44797975-44798008)
chr4 (383-456)||(49939882-49939955)
chr4 (384-456)||(2236914-2236985)
chr4 (386-422)||(8705041-8705077)
chr4 (383-451)||(22030274-22030342)
chr4 (384-451)||(22523750-22523818)
chr4 (383-451)||(27330007-27330075)
chr4 (383-451)||(29774311-29774379)
[»] chr8 (34 HSPs)
chr8 (383-451)||(10758188-10758256)
chr8 (383-451)||(35534544-35534612)
chr8 (370-451)||(30251372-30251453)
chr8 (383-446)||(43717865-43717928)
chr8 (383-456)||(1058008-1058081)
chr8 (394-455)||(28763435-28763496)
chr8 (383-448)||(38648425-38648490)
chr8 (383-458)||(2487939-2488015)
chr8 (371-427)||(9130238-9130294)
chr8 (370-446)||(15180616-15180691)
chr8 (384-451)||(26771336-26771403)
chr8 (371-422)||(30657696-30657747)
chr8 (384-451)||(38750428-38750495)
chr8 (383-449)||(35749501-35749567)
chr8 (370-451)||(38602400-38602479)
chr8 (382-427)||(6525912-6525957)
chr8 (383-458)||(11376766-11376842)
chr8 (369-449)||(36963271-36963351)
chr8 (383-450)||(27028903-27028970)
chr8 (384-455)||(41589653-41589724)
chr8 (382-456)||(3536875-3536949)
chr8 (384-446)||(12497004-12497066)
chr8 (370-420)||(32213221-32213271)
chr8 (384-445)||(37822591-37822653)
chr8 (369-451)||(42893407-42893489)
chr8 (383-448)||(922338-922403)
chr8 (383-420)||(1096592-1096629)
chr8 (394-443)||(13821986-13822035)
chr8 (383-420)||(15247708-15247745)
chr8 (383-456)||(32840917-32840990)
chr8 (383-455)||(12976279-12976351)
chr8 (384-420)||(16915839-16915875)
chr8 (405-457)||(27754468-27754520)
chr8 (370-410)||(44236741-44236781)
[»] chr2 (34 HSPs)
chr2 (383-449)||(44590097-44590163)
chr2 (370-451)||(26202099-26202180)
chr2 (370-451)||(27317450-27317531)
chr2 (383-456)||(42419859-42419932)
chr2 (370-451)||(7928216-7928297)
chr2 (386-451)||(10619154-10619219)
chr2 (383-456)||(42659142-42659215)
chr2 (383-443)||(30331830-30331890)
chr2 (370-450)||(31744370-31744450)
chr2 (384-451)||(15757590-15757657)
chr2 (383-449)||(2416386-2416452)
chr2 (386-456)||(19608567-19608637)
chr2 (369-421)||(18179050-18179102)
chr2 (384-451)||(36125432-36125497)
chr2 (394-451)||(43279469-43279528)
chr2 (384-451)||(1625971-1626038)
chr2 (383-422)||(3312177-3312216)
chr2 (388-451)||(39659445-39659508)
chr2 (383-445)||(2142731-2142793)
chr2 (370-456)||(4606991-4607077)
chr2 (394-456)||(18066194-18066256)
chr2 (383-421)||(29628673-29628711)
chr2 (383-453)||(36534837-36534907)
chr2 (383-448)||(750744-750809)
chr2 (383-420)||(12464404-12464441)
chr2 (371-456)||(13325636-13325721)
chr2 (370-427)||(15305769-15305826)
chr2 (413-458)||(32837386-32837431)
chr2 (370-446)||(3978667-3978743)
chr2 (371-411)||(9886416-9886456)
chr2 (383-451)||(20952426-20952494)
chr2 (383-451)||(23974424-23974492)
chr2 (384-440)||(39073634-39073690)
chr2 (387-451)||(41851606-41851670)
[»] chr6 (17 HSPs)
chr6 (370-458)||(34404644-34404732)
chr6 (370-451)||(6538585-6538666)
chr6 (383-450)||(33089577-33089645)
chr6 (383-449)||(13907658-13907722)
chr6 (369-458)||(31624321-31624413)
chr6 (383-456)||(34910340-34910413)
chr6 (386-422)||(658463-658499)
chr6 (384-456)||(2455325-2455397)
chr6 (388-456)||(9559358-9559426)
chr6 (398-458)||(20368127-20368187)
chr6 (371-418)||(6536716-6536763)
chr6 (386-445)||(10645319-10645378)
chr6 (369-420)||(21405071-21405122)
chr6 (373-451)||(26559160-26559239)
chr6 (383-422)||(35069543-35069582)
chr6 (384-444)||(2455066-2455126)
chr6 (370-410)||(7785662-7785702)
[»] scaffold0057 (1 HSPs)
scaffold0057 (384-456)||(24687-24759)


Alignment Details
Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 18 - 313
Target Start/End: Complemental strand, 38667071 - 38666776
Alignment:
Q  18 agggtgggagaagtttaaattcaatgtcgtttaaaccggcaaaatgtcgtttagcaaaagccagtcacgaataacattcctctctcgctcgctctatccc 117  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  38667071 agggtgtgagaagtttaaattcaatgtcgtttaaaccggcaaaatgtcgtttagcaaaagccagtcacgaataacattcctctctcgctcgcgctgtccc 38666972  T
Q  118 tcacacttgagaaatgaactcataacagnnnnnnnccgtttcaaaaaaggctttgaaatctcaattctctctctccttcaagatgtcgctcgcatcattc 217  Q
    |||||||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38666971 tcacacttgagaaatgaactgataacagaaaaaaaccgtttcaaaaaaggctttgaaatctcaattctctctctccttcaagatgtcgctcgcatcattc 38666872  T
Q  218 tccatcatccgccaccaacgcacggtggccaccgccgcccctcgacttctccaccacttccaaatctccgccagaaatcaaaaccctaaacacgaa 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38666871 tccatcatccgccaccaacgcacggtggccaccgccgcccctcgacttctccaccacttccaaatctccgccagaaatcaaaaccctaaacacgaa 38666776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 446
Target Start/End: Original strand, 18405763 - 18405825
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacag 446  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||  |||| ||||||||||||    
T  18405763 ttatttgagcttatctactgacataagttttgtgagactgtttgcaagaacttatgaaaacag 18405825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 369 - 427
Target Start/End: Original strand, 25447162 - 25447220
Alignment:
Q  369 tctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttg 427  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||||||| ||||    
T  25447162 tctgtttggattgacttatttgagtttatctactgacataagttttgtgagactgtttg 25447220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 369 - 451
Target Start/End: Complemental strand, 39980882 - 39980800
Alignment:
Q  369 tctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||||   ||| |||||| |||||||||  |||||||||||||||||| ||| | |||| |||||||||||||||||    
T  39980882 tctgtttggattggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttat 39980800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 31365119 - 31365187
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||| ||||||| || |||||||||||||||||| ||||  |||| |||||||| ||||||||    
T  31365119 cttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttat 31365187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 445
Target Start/End: Original strand, 42799884 - 42799960
Alignment:
Q  370 ctgtttggatcatcttatttgag-tttatctactgacataagttttgtgagactctttgacagaatttatgaaaaca 445  Q
    ||||||||||   |||||||||| |||||||||||||||| ||||||||| ||||||||  |||| |||||||||||    
T  42799884 ctgtttggattggcttatttgagctttatctactgacatatgttttgtgaaactctttgggagaacttatgaaaaca 42799960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 450
Target Start/End: Complemental strand, 584185 - 584118
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagctta 450  Q
    |||||||||| |||||||||  |||||||| ||||||||| |||   |||||||||||||||||||||    
T  584185 cttatttgagcttatctactagcataagttctgtgagactgttttggagaatttatgaaaacagctta 584118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 22667542 - 22667468
Alignment:
Q  383 cttatttgagtttatctactgacataag-ttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||| |||||||||||||||||   |||||||||| ||||| ||| |||||| ||||||| ||||||||    
T  22667542 cttatttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaacagcatataacat 22667468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 22724181 - 22724107
Alignment:
Q  383 cttatttgagtttatctactgacataag-ttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||| |||||||||||||||||   |||||||||| ||||| ||| |||||| ||||||| ||||||||    
T  22724181 cttatttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaacagcatataacat 22724107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 456
Target Start/End: Complemental strand, 37389311 - 37389249
Alignment:
Q  394 ttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||| ||||||||||||||||||||||| |  |||| ||||||||||| ||||| ||||    
T  37389311 ttatctacagacataagttttgtgagactcttcgggagaacttatgaaaacaacttatgacat 37389249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 3776325 - 3776390
Alignment:
Q  387 tttgagtttatctactgacataagtt-ttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||||||||| |||||||  |||||||| | ||||| |||| |||||||||||||||||    
T  3776325 tttgagtttatctactggcataagtaattgtgagaatgtttgagagaacttatgaaaacagcttat 3776390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 21367806 - 21367733
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||| ||||||||   ||||||||||||| |||| ||||  |||| ||||||||||||||||| ||||    
T  21367806 cttatttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaacagcttatgacat 21367733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 420
Target Start/End: Original strand, 33405123 - 33405160
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgaga 420  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  33405123 cttatttgagtttatctactgacataagttttgggaga 33405160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 456
Target Start/End: Original strand, 34610737 - 34610810
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||| |||||||||||||||||||||||   ||| ||||  |||| |||||||||| |||||| ||||    
T  34610737 cttatttgagcttatctactgacataagttttgtacaactatttgggagaacttatgaaaactgcttatgacat 34610810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 24085269 - 24085337
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||| |||||||| | ||||||||||||||||||  ||   |||| |||||||||||||||||    
T  24085269 cttatttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaacagcttat 24085337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 451
Target Start/End: Original strand, 24684741 - 24684821
Alignment:
Q  371 tgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||| | |||||||||| |||||||||| |||||||||| ||||||  ||||   ||| ||||||||||| |||||    
T  24684741 tgtttggattaacttatttgagcttatctactggcataagttttttgagacattttggttgaacttatgaaaacaacttat 24684821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 31365240 - 31365308
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||||||||||| || ||||| |||||||| ||| ||||  |||| ||||||| |||||||||    
T  31365240 cttatttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaatacagcttat 31365308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 51929288 - 51929356
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||  |||| ||||| |||||||||||||| ||| ||||| ||||||| ||||||||| ||||    
T  51929288 cttatttgaccttatttactggcataagttttgtgatactatttgagagaatttctgaaaacagattat 51929356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 456
Target Start/End: Original strand, 402475 - 402546
Alignment:
Q  385 tatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||||||| ||| ||||||||||||  ||||| ||||  ||||  |||||||||||||||| ||||    
T  402475 tatttgagtttatcaactaacataagttttgcaagactgtttgggagaacgtatgaaaacagcttatgacat 402546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 422
Target Start/End: Complemental strand, 5448583 - 5448544
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagact 422  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  5448583 cttatttgagcttatctactgacataagttttgtaagact 5448544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 414
Target Start/End: Complemental strand, 26911730 - 26911699
Alignment:
Q  383 cttatttgagtttatctactgacataagtttt 414  Q
    ||||||||||||||||||||||||||||||||    
T  26911730 cttatttgagtttatctactgacataagtttt 26911699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 433
Target Start/End: Original strand, 3845498 - 3845544
Alignment:
Q  387 tttgagtttatctactgacataagttttgtgagactctttgacagaa 433  Q
    |||||| |||||||||| |||||||||||||||||| ||||| ||||    
T  3845498 tttgagcttatctactggcataagttttgtgagactgtttgatagaa 3845544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 443
Target Start/End: Original strand, 20170632 - 20170706
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaa-tttatgaaaa 443  Q
    ||||||||||   |||||||||| ||||||| |||||||||||| |||||||| ||||  |||| ||||||||||    
T  20170632 ctgtttggattggcttatttgagcttatctagtgacataagtttagtgagactgtttgttagaactttatgaaaa 20170706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 456
Target Start/End: Complemental strand, 22203581 - 22203496
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||| | | |||| ||| |||||||| ||||| | |||||||||||| ||||  |||| ||||||||||||||||| ||||    
T  22203581 ctgtttggattaacatattcgagcttatctaccgacattaattttgtgagactgtttg-gagaacttatgaaaacagcttatgacat 22203496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 42747713 - 42747775
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaaca 445  Q
    ||||||||||||||||||||  ||||||| |||||||||| |||   |||| |||||||||||    
T  42747713 cttatttgagtttatctacttccataagtattgtgagactgtttttgagaacttatgaaaaca 42747775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 5436211 - 5436138
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||||||||| |||| |||||||||||||| ||| |||   |||| || |||||||| ||||| ||||    
T  5436211 cttatttgagtttatcaactgtcataagttttgtgacactgttttgaagaacttctgaaaacaacttatgacat 5436138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 26878339 - 26878266
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||| ||| |||||||||||||||||||  |||| ||| ||||| |||| || |||||| ||||||| ||||    
T  26878339 cttattcgagcttatctactgacataagttgcgtgaaactgtttgagagaacttgtgaaaatagcttatgacat 26878266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 451
Target Start/End: Complemental strand, 30444029 - 30443964
Alignment:
Q  386 atttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||| |||||||||| ||||| ||| |||||||| ||||  |||  |||||||||||||||||    
T  30444029 atttgagcttatctactggcataaatttggtgagactgtttggtagagcttatgaaaacagcttat 30443964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 456
Target Start/End: Original strand, 34235024 - 34235097
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||| ||| ||||||||| |||||||||||| | |||  ||||| |||| ||||||| ||||||||| ||||    
T  34235024 cttattcgagcttatctactaacataagttttgcgtgaccgtttgagagaacttatgaatacagcttatgacat 34235097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 46031129 - 46031056
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||||||||||| ||  ||||||||| ||||||| ||| | |||| ||| ||||||||| ||| ||||    
T  46031129 cttatttgagtttatctattgttataagttttatgagactgtttcagagaacttacgaaaacagcctatgacat 46031056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 455
Target Start/End: Complemental strand, 50211886 - 50211801
Alignment:
Q  371 tgtttggatcatcttatttgagtttatctactgacataagtt-ttgtgagactctttgacagaatttatgaaaacagcttataaca 455  Q
    ||||||||| | ||||||| || ||||||||| |||||||   |||| ||||| ||||| |||| ||||||||||| |||||||||    
T  50211886 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactgtttgagagaacttatgaaaacaacttataaca 50211801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 451
Target Start/End: Original strand, 53789406 - 53789460
Alignment:
Q  395 tatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||||||||||||||||||  |||||| |||| || || |||||||||||    
T  53789406 tatctactgacataagttttgtgaga--ctttgagagaacttttggaaacagcttat 53789460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 9832686 - 9832754
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||| |||| || ||||||||||||||| | ||| ||||  |||| || ||||||||||||||    
T  9832686 cttatttgagcttatttattgacataagttttgtcaaactgtttgggagaacttttgaaaacagcttat 9832754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 16072959 - 16073007
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtga 418  Q
    ||||||||||   |||||||||| ||||||| |||||||||||||||||    
T  16072959 ctgtttggattgacttatttgagcttatctaatgacataagttttgtga 16073007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 427
Target Start/End: Original strand, 36783283 - 36783327
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttg 427  Q
    |||||||||||||||||| | | ||||||||||||||||| ||||    
T  36783283 cttatttgagtttatctattaatataagttttgtgagactgtttg 36783327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 4e-76; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 314 - 458
Target Start/End: Original strand, 35445706 - 35445850
Alignment:
Q  314 actcgatacatttattataattttataaatacatcactaattaaaactaataccatctgtttggatcatcttatttgagtttatctactgacataagttt 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35445706 actcgatacatttattataattttataaatacatcactaattaaaactaataccatctgtttggatcatcttatttgagtttatctactgacataagttt 35445805  T
Q  414 tgtgagactctttgacagaatttatgaaaacagcttataacatgt 458  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  35445806 tgtgagactctttgacagaatttatgaaaacagcttataacatgt 35445850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 370 - 456
Target Start/End: Complemental strand, 10640105 - 10640019
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||| | | ||||  |||| ||||||||||||||||| ||||    
T  10640105 ctgtttggattagcttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacat 10640019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 384 - 456
Target Start/End: Complemental strand, 11064804 - 11064732
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||||||||||||||||  ||||||||||||||||| | ||||| |||| ||||||||| ||||||| ||||    
T  11064804 ttatttgagtttatctaccaacataagttttgtgagattgtttgagagaacttatgaaaatagcttatgacat 11064732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 450
Target Start/End: Complemental strand, 9107229 - 9107162
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagctta 450  Q
    |||||||||||||||||| ||||||||||||||||||| | ||||  |||| | ||||||||||||||    
T  9107229 cttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagctta 9107162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 11700301 - 11700228
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||| ||||| |||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||| ||||    
T  11700301 cttatttgagcttatccactggcataagttttgtgagactgtttcacagaacttatggaaacaacttatgacat 11700228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 451
Target Start/End: Original strand, 16937801 - 16937882
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||   |||||||||| |||||||||  |||||||||||||||| | ||||  |||| |||||||||||||||||    
T  16937801 ctgtttggattggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttat 16937882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 443
Target Start/End: Complemental strand, 15015982 - 15015922
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaa 443  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||  |||| |||||||||    
T  15015982 cttatttgagcttatctactgacataagctttgtgagactgtttgggagaacttatgaaaa 15015922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 445
Target Start/End: Complemental strand, 32010097 - 32010022
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaaca 445  Q
    ||||||||||   |||||||||||||||||||| ||||||||||  | ||||| ||||| |||| |||||||||||    
T  32010097 ctgtttggattgacttatttgagtttatctactcacataagtttcttcagactgtttgagagaacttatgaaaaca 32010022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 451
Target Start/End: Original strand, 7705916 - 7705997
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||   ||||||||||  ||||||||  ||||||||||||||  |||||||  |||| |||||||||||||||||    
T  7705916 ctgtttggattgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttat 7705997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 12425712 - 12425668
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttg 427  Q
    |||||||||| |||||||||| |||||||||||||||||| ||||    
T  12425712 cttatttgagcttatctactgtcataagttttgtgagactgtttg 12425668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 42569530 - 42569593
Alignment:
Q  369 tctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaa 433  Q
    ||||||||||| || |||||||||| ||||||||  |||||||||||||||||| ||||| ||||    
T  42569530 tctgtttggatgat-ttatttgagtgtatctactagcataagttttgtgagactatttgagagaa 42569593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 456
Target Start/End: Complemental strand, 32942719 - 32942660
Alignment:
Q  397 tctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||||||||||||||||||  |||| ||||  |||||||||||| ||||||||| ||||    
T  32942719 tctactgacataagttttgtttgactgtttgggagaatttatgaatacagcttatgacat 32942660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Original strand, 42568948 - 42569011
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaa 433  Q
    ||||||||||   |||||||||||||||  ||| |||||||||| |||||||| ||||||||||    
T  42568948 ctgtttggattgacttatttgagtttatgcactaacataagtttcgtgagactgtttgacagaa 42569011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 446
Target Start/End: Complemental strand, 32941623 - 32941545
Alignment:
Q  369 tctgtttggatcatcttatttgag-tttatctactgacataagttttgtgagactctttgacagaatttatgaaaacag 446  Q
    |||||||||||   |||||| ||| |||||||||||||||||||| ||||||||  ||||  |||| ||||||||||||    
T  32941623 tctgtttggattgacttattagagctttatctactgacataagttctgtgagaccgtttgggagaacttatgaaaacag 32941545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 39105604 - 39105530
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactcttt-gacagaatttatgaaaacagcttataacat 456  Q
    ||||||||||||||||||  |  ||||||||| ||||||| ||| |  |||||||||||||||||||||| ||||    
T  39105604 cttatttgagtttatctaggggtataagttttatgagacttttttgggagaatttatgaaaacagcttatgacat 39105530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 448
Target Start/End: Complemental strand, 39594946 - 39594881
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagct 448  Q
    |||||||||| |||||||| |||||||||||||| ||| | ||||  | || ||||||||||||||    
T  39594946 cttatttgagcttatctaccgacataagttttgttagattgtttgggacaacttatgaaaacagct 39594881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 41419458 - 41419385
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||| | |||||||||||||| |||||||||| | ||||  | || || |||||||||||||| ||||    
T  41419458 cttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatgacat 41419385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 427
Target Start/End: Original strand, 42500189 - 42500218
Alignment:
Q  398 ctactgacataagttttgtgagactctttg 427  Q
    ||||||||||||||||||||||||||||||    
T  42500189 ctactgacataagttttgtgagactctttg 42500218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 456
Target Start/End: Complemental strand, 15246971 - 15246899
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||||||| ||||||||||||||||||||| | ||| | ||||  |||| |||||||| || ||||| ||||    
T  15246971 ttatttgagcttatctactgacataagttttattagaatgtttgggagaacttatgaaagcaacttatgacat 15246899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 449
Target Start/End: Complemental strand, 32009830 - 32009766
Alignment:
Q  385 tatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagctt 449  Q
    ||||||||| |||||  |||| |||||||||||||||| ||||  | || |||||||||||||||    
T  32009830 tatttgagtctatctgttgacctaagttttgtgagactatttggaaaaacttatgaaaacagctt 32009766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 40426904 - 40426860
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttg 427  Q
    |||||||||| ||||||| |||||||| |||||||||||| ||||    
T  40426904 cttatttgagcttatctaatgacataaattttgtgagactgtttg 40426860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 451
Target Start/End: Complemental strand, 41534577 - 41534509
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||| | |||||||||||||| |||||||||| | ||||  | || || ||||||||||||||    
T  41534577 cttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttat 41534509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 374 - 451
Target Start/End: Complemental strand, 38001743 - 38001666
Alignment:
Q  374 ttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||| | |||||||||||||||| ||||||||||||||||||||||| ||||  |||| |||||||||||||||||    
T  38001743 ttggataagcttatttgagtttatcaactgacataagttttgtgagactgtttgggagaacttatgaaaacagcttat 38001666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 451
Target Start/End: Complemental strand, 2295235 - 2295167
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||| |||||||||| |||||||||||||||||| ||||  |||| |||||||||||||||||    
T  2295235 cttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttat 2295167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 447
Target Start/End: Complemental strand, 24334334 - 24334270
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagc 447  Q
    |||||||||||||||| || |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  24334334 cttatttgagtttatcaacggacataagttttgtgagactatttgagagaatttataaaaacagc 24334270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 449
Target Start/End: Original strand, 37617396 - 37617462
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagctt 449  Q
    |||||||||||||||||| || | |||||||||||||||| ||||  ||||||||||||||||||||    
T  37617396 cttatttgagtttatctattgccgtaagttttgtgagactgtttgcgagaatttatgaaaacagctt 37617462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 451
Target Start/End: Complemental strand, 6557111 - 6557043
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||  ||||||||| ||||||||||||||||||| ||||| |||| ||||||||| |||||||    
T  6557111 cttatttgaacttatctactaacataagttttgtgagactatttgagagaacttatgaaaatagcttat 6557043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 384 - 456
Target Start/End: Complemental strand, 7941744 - 7941672
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||||||||| || || | |||||||||||||| ||||  |||||||||||||||||||||| ||||    
T  7941744 ttatttgagtttatctgctaacgtgagttttgtgagactgtttggaagaatttatgaaaacagcttatgacat 7941672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 451
Target Start/End: Complemental strand, 29904890 - 29904822
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||| |||||||||  |||||||||||||||||| ||||| |||| |||| ||||||||||||    
T  29904890 cttatttgagcttatctacttgcataagttttgtgagactgtttgagagaacttataaaaacagcttat 29904822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 443
Target Start/End: Original strand, 39976141 - 39976201
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaa 443  Q
    |||||||||| ||||||||||||||||||||||||| ||| ||||| |||| |||||||||    
T  39976141 cttatttgagattatctactgacataagttttgtgaaactgtttgagagaacttatgaaaa 39976201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 440
Target Start/End: Original strand, 33204311 - 33204382
Alignment:
Q  369 tctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatga 440  Q
    ||||||| ||||  |||||||||| ||||||||||||||||||||||||||||| ||||  |||| ||||||    
T  33204311 tctgtttagatcgacttatttgagcttatctactgacataagttttgtgagactgtttgggagaacttatga 33204382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 451
Target Start/End: Complemental strand, 13810137 - 13810069
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||| | |||||||||||| |||||||||||||||||||| | |||| ||||||| |||| ||||    
T  13810137 cttatttgtgcttatctactgacgtaagttttgtgagactcttttagagaacttatgaatacagtttat 13810069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 450
Target Start/End: Original strand, 50644186 - 50644253
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagctta 450  Q
    |||||||||| ||||||||| ||||| ||||||||||||| ||||  |||| ||||||||||| ||||    
T  50644186 cttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaacaactta 50644253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 455
Target Start/End: Original strand, 3233932 - 3234018
Alignment:
Q  369 tctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataaca 455  Q
    |||||||||||   |||||||||| ||||||| || | |||||||||||||||| || |  |||| ||||||||||| |||||||||    
T  3233932 tctgtttggattgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttataaca 3234018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 456
Target Start/End: Original strand, 36514594 - 36514680
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||| | ||| ||||||||||||||||||||| |||||||||| ||||||| || |  |||| ||||||||| | ||||| ||||    
T  36514594 ctgtttcggtcaacttatttgagtttatctactgccataagttttttgagactgttagggagaacttatgaaaataacttatgacat 36514680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 456
Target Start/End: Original strand, 10233579 - 10233652
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||| ||| ||||| ||||||||| ||||||| ||||| ||||  |||| ||||||||||||||||| ||||    
T  10233579 cttattagagcttatccactgacatatgttttgtaagactgtttggaagaacttatgaaaacagcttatgacat 10233652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 14443565 - 14443512
Alignment:
Q  405 cataagttttgtgagactctttgacagaatttatgaaaacagcttataacatgt 458  Q
    ||||| |||||||||||| | ||| |||||||||||||||||||| ||||||||    
T  14443565 cataaattttgtgagactatatgaaagaatttatgaaaacagcttttaacatgt 14443512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 451
Target Start/End: Complemental strand, 49938886 - 49938818
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||||||| |  || |||||||||||||||| | ||||  |||| |||||||||||||||||    
T  49938886 cttatttgagtttatatcgtggcataagttttgtgagattgtttgggagaacttatgaaaacagcttat 49938818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 9572049 - 9572100
Alignment:
Q  400 actgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||| ||||||||||| ||||  |||| |||||||||||||||||    
T  9572049 actgacataagatttgtgagactgtttgggagaacttatgaaaacagcttat 9572100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 451
Target Start/End: Complemental strand, 38247465 - 38247398
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||  |||||||||| |||||||||||||  ||| ||||  |||| |||||||||||||||||    
T  38247465 ttatttgaacttatctactggcataagttttgtgtcactgtttgggagaacttatgaaaacagcttat 38247398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 405 - 451
Target Start/End: Original strand, 7119891 - 7119937
Alignment:
Q  405 cataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||||||||||| ||||  |||||||||||||||| |||||    
T  7119891 cataagttttgtgagactgtttgcaagaatttatgaaaacaacttat 7119937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 451
Target Start/End: Original strand, 7244587 - 7244652
Alignment:
Q  385 tatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||||||||| ||| ||||||||||||||||| ||| |  ||| ||||||||||| |||||    
T  7244587 tatttgagtttatctattgatataagttttgtgagactatttta-ggaacttatgaaaacaacttat 7244652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 427
Target Start/End: Complemental strand, 30192076 - 30192038
Alignment:
Q  389 tgagtttatctactgacataagttttgtgagactctttg 427  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  30192076 tgagtttatctattgacataagttttatgagactctttg 30192038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 421
Target Start/End: Original strand, 38116008 - 38116046
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagac 421  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  38116008 cttatttgagcttatctactgacgtaagttttgtgagac 38116046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 1432654 - 1432581
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||| ||||| || ||||||| |||||||||||| ||||  |||| ||||||||| ||| ||| ||||    
T  1432654 cttatttgagcttatccaccgacataaattttgtgagactgtttggaagaacttatgaaaatagcgtatgacat 1432581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Original strand, 1684036 - 1684069
Alignment:
Q  389 tgagtttatctactgacataagttttgtgagact 422  Q
    |||| |||||||||||||||||||||||||||||    
T  1684036 tgagcttatctactgacataagttttgtgagact 1684069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 427
Target Start/End: Complemental strand, 2295343 - 2295286
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttg 427  Q
    ||||||||||   |||||||||| |||||||||||| |||||||| ||||||| ||||    
T  2295343 ctgtttggattggcttatttgagcttatctactgacttaagttttctgagactatttg 2295286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 458
Target Start/End: Complemental strand, 4445816 - 4445771
Alignment:
Q  413 ttgtgagactctttgacagaatttatgaaaacagcttataacatgt 458  Q
    |||||||||| ||||  ||||||||||||| |||||||||||||||    
T  4445816 ttgtgagactgtttgggagaatttatgaaagcagcttataacatgt 4445771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 427
Target Start/End: Complemental strand, 15784465 - 15784412
Alignment:
Q  374 ttggatcatcttatttgagtttatctactgacataagttttgtgagactctttg 427  Q
    |||||||  |||||||||| ||||||||| ||||||||||||| ||||| ||||    
T  15784465 ttggatcgacttatttgagcttatctactaacataagttttgtaagactgtttg 15784412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 451
Target Start/End: Original strand, 37517096 - 37517165
Alignment:
Q  382 tcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||| |||||| |||| ||||  |||||||||||||||||| | ||| |||| ||| |||||||||||||    
T  37517096 tcttgtttgagcttatatacttgcataagttttgtgagactgtatgaaagaacttacgaaaacagcttat 37517165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 451
Target Start/End: Complemental strand, 5721064 - 5720996
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||| ||| |||||  ||||||||||||  |||| ||||  |||| |||||||||||||||||    
T  5721064 cttatttgagcttaactacttgcataagttttgttggactgtttgggagaacttatgaaaacagcttat 5720996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 451
Target Start/End: Complemental strand, 6102292 - 6102225
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||||||||||| | ||||| |||||||||| | ||||  ||||  ||||||||||||||||    
T  6102292 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttat 6102225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 456
Target Start/End: Complemental strand, 43990395 - 43990323
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||||||||| ||||||||| |||| ||||||||| || ||||  ||||  | |||||||||||||| ||||    
T  43990395 ttatttgagttcatctactgatataaattttgtgaggctatttgggagaacgtttgaaaacagcttatgacat 43990323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 8e-19; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 19302494 - 19302562
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||| ||||||||||||||||||||||||||| | ||||  ||||||||||||||||||||||    
T  19302494 cttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttat 19302562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 449
Target Start/End: Original strand, 27863656 - 27863722
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagctt 449  Q
    |||||||||| ||||| |||| |||||||||||||||||| ||||| |||| |||||||||||||||    
T  27863656 cttatttgagcttatccactggcataagttttgtgagactatttgagagaacttatgaaaacagctt 27863722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 451
Target Start/End: Original strand, 33601342 - 33601409
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||| ||||||| || ||||||||||||||||||||||   |||| |||||||||||||||||    
T  33601342 ttatttgagcttatctattggcataagttttgtgagactcttttcgagaacttatgaaaacagcttat 33601409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 443
Target Start/End: Complemental strand, 31744956 - 31744881
Alignment:
Q  368 atctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaa 443  Q
    |||||||||||| | ||||||||| ||||||||| ||| ||| |||| ||||| | ||||| ||||||||||||||    
T  31744956 atctgtttggattaacttatttgaatttatctaccgacgtaaattttatgagattgtttgaaagaatttatgaaaa 31744881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 33266417 - 33266479
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaaca 445  Q
    |||||||||| |||||||| |||||||||||||||| ||| ||||  |||||||| |||||||    
T  33266417 cttatttgagcttatctaccgacataagttttgtgaaactatttgggagaatttacgaaaaca 33266479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 44822110 - 44822060
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgaga 420  Q
    ||||||||||   ||||||||||||||||| ||||||||||||||||||||    
T  44822110 ctgtttggattgacttatttgagtttatctgctgacataagttttgtgaga 44822060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 451
Target Start/End: Original strand, 4970710 - 4970791
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||   |||||||||| ||||||  |||||||||| |||||||||| ||||  |||| ||||||||||| |||||    
T  4970710 ctgtttggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgggagaacttatgaaaacaacttat 4970791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 394 - 451
Target Start/End: Original strand, 19022527 - 19022584
Alignment:
Q  394 ttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||||||| |||||||||||| | ||||  |||||||||||||||| |||||    
T  19022527 ttatctactgacatgagttttgtgagattgtttgggagaatttatgaaaacaacttat 19022584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 20526585 - 20526512
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||||||||||| ||  | || |||||||||||| ||||| |||| |||||||||||| |||| ||||    
T  20526585 cttatttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaacagtttatcacat 20526512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 46280211 - 46280282
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaa---tttatgaaaacagcttat 451  Q
    ||||||||||||||||| |||||||| ||||||||||||| ||||  ||||    |||||||||||||||||    
T  46280211 cttatttgagtttatctgctgacatatgttttgtgagactgtttgggagaacttattatgaaaacagcttat 46280282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 455
Target Start/End: Complemental strand, 48140335 - 48140270
Alignment:
Q  390 gagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataaca 455  Q
    ||||||||||| || |||||||| ||||||||| ||||  ||||| |||||||||||||| |||||    
T  48140335 gagtttatctattggcataagttatgtgagactgtttgggagaatgtatgaaaacagcttgtaaca 48140270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 445
Target Start/End: Original strand, 3927931 - 3928003
Alignment:
Q  373 tttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaaca 445  Q
    ||||||||  ||||||||||  ||||||||  |||||||||||||||||| ||||| ||||||| | ||||||    
T  3927931 tttggatcggcttatttgaggctatctactagcataagttttgtgagactatttgagagaattttttaaaaca 3928003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 8094445 - 8094369
Alignment:
Q  383 cttatttgagtttatctactgacataagtt-ttgtgagactctttgacagaatttatgaaaacagcttataacatgt 458  Q
    |||||||||| |||||||||  ||||||   |||||||||| ||||| ||| |||||||||||||||||| ||||||    
T  8094445 cttatttgagcttatctactagcataagcacttgtgagactatttgagagattttatgaaaacagcttatgacatgt 8094369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 440
Target Start/End: Complemental strand, 18765422 - 18765366
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatga 440  Q
    ||||||||| ||||||| ||||||||||||||||||||| ||||  |||| ||||||    
T  18765422 ttatttgagcttatctattgacataagttttgtgagactgtttgggagaacttatga 18765366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 451
Target Start/End: Complemental strand, 48470183 - 48470115
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||| |||||||  |||||||||||| ||||| | ||||  |||| |||||||||||||||||    
T  48470183 cttatttgagcttatctatagacataagttttatgagattgtttgggagaacttatgaaaacagcttat 48470115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 451
Target Start/End: Original strand, 33601963 - 33602026
Alignment:
Q  388 ttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||| |||||||||| |||||||||| |||||||||||   | || |||||||||||||||||    
T  33601963 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttat 33602026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 9210960 - 9210906
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaattta 437  Q
    |||||||||| ||||||||||| ||||||||| ||||||| ||||  ||||||||    
T  9210960 cttatttgagcttatctactgatataagttttctgagactgtttgggagaattta 9210906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 455
Target Start/End: Complemental strand, 27288060 - 27288014
Alignment:
Q  409 agttttgtgagactctttgacagaatttatgaaaacagcttataaca 455  Q
    |||||||||||||| ||||  |||| |||||||||||||||||||||    
T  27288060 agttttgtgagactatttggaagaacttatgaaaacagcttataaca 27288014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 456
Target Start/End: Complemental strand, 33678908 - 33678846
Alignment:
Q  394 ttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||  |||||||||||||||||  ||||  |||| ||||||||||| ||||||||||    
T  33678908 ttatctacttgcataagttttgtgagacaatttgggagaacttatgaaaacaacttataacat 33678846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 34036056 - 34035983
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||| ||||||||||||||| || ||||||||||  |||  |||| ||||||||| | ||||| ||||    
T  34036056 cttatttgagcttatctactgacatatgtattgtgagactacttggaagaacttatgaaaataacttatgacat 34035983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 456
Target Start/End: Complemental strand, 41040303 - 41040230
Alignment:
Q  384 ttatttgagtttatctactgacataagt-tttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||||||||||||||||||| |||||| |||||||| ||||||   |||  ||||| ||||||||||| ||||    
T  41040303 ttatttgagtttatctactgatataagtatttgtgaggctctttagaagagcttatggaaacagcttatgacat 41040230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 17944274 - 17944342
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||| || |||||||||| |||||| ||||||||||| ||| | | || |||| ||||||||||||    
T  17944274 cttatttaagcttatctactggcataagctttgtgagactgtttcagacaacttataaaaacagcttat 17944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 448
Target Start/End: Complemental strand, 21196406 - 21196342
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagct 448  Q
    ||||||||| |||| ||||  |||||||||||||||||| |||   |||||||||| ||||||||    
T  21196406 ttatttgagcttatatactagcataagttttgtgagactgtttagaagaatttatgcaaacagct 21196342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 455
Target Start/End: Original strand, 21568454 - 21568498
Alignment:
Q  411 ttttgtgagactctttgacagaatttatgaaaacagcttataaca 455  Q
    |||||||||||| ||||  |||| |||||||||||||||||||||    
T  21568454 ttttgtgagactgtttgggagaacttatgaaaacagcttataaca 21568498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 411
Target Start/End: Complemental strand, 24048679 - 24048651
Alignment:
Q  383 cttatttgagtttatctactgacataagt 411  Q
    |||||||||||||||||||||||||||||    
T  24048679 cttatttgagtttatctactgacataagt 24048651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 458
Target Start/End: Original strand, 25670517 - 25670593
Alignment:
Q  383 cttatttgagtttatctactgacataagtt-ttgtgagactctttgacagaatttatgaaaacagcttataacatgt 458  Q
    |||| ||||| ||||||| ||||||||| | |||||||||| ||||| | || ||||||||||| ||||| ||||||    
T  25670517 cttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacatgt 25670593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 443
Target Start/End: Complemental strand, 33287979 - 33287919
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaa 443  Q
    ||||| |||| ||||||  |||| |||||||||||||||| ||||  ||||||||||||||    
T  33287979 cttatgtgagcttatcttatgacctaagttttgtgagactatttgggagaatttatgaaaa 33287919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 445
Target Start/End: Complemental strand, 45593681 - 45593605
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatct-actgacataagttttgtgagactctttgacagaatttatgaaaaca 445  Q
    ||||||||||   ||||||||||||||| | ||||||||||| ||||||||||| ||||  |||| |||| ||||||    
T  45593681 ctgtttggattggcttatttgagtttatattactgacataagctttgtgagactgtttgggagaacttataaaaaca 45593605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 8e-19; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 1706757 - 1706693
Alignment:
Q  387 tttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||||||||||||||||||||||||||||  ||||| |||| |||||||||||||||||    
T  1706757 tttgagtttatctactgacataagttttgtgagacggtttgagagaaattatgaaaacagcttat 1706693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 456
Target Start/End: Original strand, 17822783 - 17822869
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||| | |||||||||| ||||||||||||||||||| ||||||||| |||   ||||  |||||||||||||||| ||||    
T  17822783 ctgtttggattaacttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacat 17822869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 451
Target Start/End: Complemental strand, 55437228 - 55437147
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||   ||||||||||||||||||||| |||||||||||||| | | ||||| |||| ||||||||||| |||||    
T  55437228 ctgtttggattggcttatttgagtttatctactgccataagttttgtgaaattgtttgaaagaacttatgaaaacaacttat 55437147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 15173234 - 15173302
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||  ||| |||||||||| |||||||    
T  15173234 cttatttgaacttatctactgacataagttttgtgagactgtttgggagactttatgaaaatagcttat 15173302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 39691080 - 39691148
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||| |||||||||  |||||||||||||||||| ||||| ||||||||||  ||||||||||    
T  39691080 cttatttgagcttatctactagcataagttttgtgagactgtttgagagaatttatgggaacagcttat 39691148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 450
Target Start/End: Original strand, 49940085 - 49940165
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagctta 450  Q
    ||||||||||   |||||||||| ||| || || ||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  49940085 ctgtttggattgacttatttgagcttacctgctaacataagttttgtgagactgtttgagagaacttatgaaaacagctta 49940165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 451
Target Start/End: Original strand, 21731588 - 21731655
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||  |||||||||||||||||||||||||| | ||||  |||| |||||||||||||||||    
T  21731588 ttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttat 21731655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 369 - 451
Target Start/End: Original strand, 27043747 - 27043829
Alignment:
Q  369 tctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||||   |||||||||| ||||||||||||||||||||||||| ||| ||||  |||| ||||| ||| |||||||    
T  27043747 tctgtttggattgacttatttgagcttatctactgacataagttttgtgaaactgtttggaagaagttatgcaaatagcttat 27043829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 384 - 446
Target Start/End: Complemental strand, 40174695 - 40174633
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacag 446  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||  | || ||||||||||||    
T  40174695 ttatttgagtttatctactaacataagttttgtgagactgtttgggataacttatgaaaacag 40174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 24169402 - 24169329
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||| |||| || | |||| ||||||| ||||    
T  24169402 cttattagagtttatctactggcataagttttgtgagactatttgagagaacttttaaaaatagcttatgacat 24169329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 456
Target Start/End: Original strand, 52315128 - 52315201
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||  |||| |||| |||||| ||||| ||||    
T  52315128 cttatttgagtttatctactgacgtaagttttgtgagattgtttggaagaacttatcaaaacaacttatcacat 52315201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 451
Target Start/End: Complemental strand, 54426195 - 54426114
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||   |||||||||| |||||||||| ||||||||||||||||||  |||  |||| ||| |||||||||||||    
T  54426195 ctgtttggattggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttat 54426114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 369 - 456
Target Start/End: Original strand, 13126493 - 13126580
Alignment:
Q  369 tctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||||   ||||||| || ||| ||||| ||||||||||||||||||| ||||  |||| |||| |||||||||||| ||||    
T  13126493 tctgtttggattggcttattttagcttacctactaacataagttttgtgagactgtttggaagaacttataaaaacagcttatgacat 13126580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 451
Target Start/End: Complemental strand, 2244183 - 2244122
Alignment:
Q  390 gagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||||||||||||||||| ||| ||| ||||  ||||||| | ||||||||||||    
T  2244183 gagtttatctactgacataagttttttgaaactgtttgggagaatttttaaaaacagcttat 2244122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 420
Target Start/End: Complemental strand, 41336899 - 41336862
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgaga 420  Q
    |||||||||||||||||||| |||||||||||||||||    
T  41336899 cttatttgagtttatctactcacataagttttgtgaga 41336862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 451
Target Start/End: Original strand, 42403941 - 42404021
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||   |||||||||| ||||| |||||||||||||||||| | || ||||  ||||||| ||||||||||||||    
T  42403941 ctgtttggattgacttatttgagcttatcaactgacataagttttgtgtg-ctatttgggagaatttctgaaaacagcttat 42404021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 25904154 - 25904222
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||| ||||| | |||||||| |||||||||||| ||||  |||  |||||||||||||||||    
T  25904154 cttatttgagcttatccaatgacataaattttgtgagactgtttgggagagcttatgaaaacagcttat 25904222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 451
Target Start/End: Complemental strand, 29657523 - 29657455
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||| ||||||||  ||| ||||||||||||| |  |||| |||| |||||||||||||||||    
T  29657523 cttatttgagcttatctaccaacacaagttttgtgagattgcttgagagaacttatgaaaacagcttat 29657455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 443
Target Start/End: Original strand, 49003973 - 49004033
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaa 443  Q
    |||||||||| |||||||||  | |||||||||||||||| ||||| |||| |||||||||    
T  49003973 cttatttgagcttatctactagcttaagttttgtgagactatttgagagaacttatgaaaa 49004033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 1408285 - 1408327
Alignment:
Q  416 tgagactctttgacagaatttatgaaaacagcttataacatgt 458  Q
    ||||||| ||||| |||||||||||||||||||||| ||||||    
T  1408285 tgagactgtttgagagaatttatgaaaacagcttattacatgt 1408327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 412
Target Start/End: Complemental strand, 25571411 - 25571369
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagtt 412  Q
    ||||||||||   ||||||||||||||||||||||||||||||    
T  25571411 ctgtttggattggcttatttgagtttatctactgacataagtt 25571369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 55870261 - 55870319
Alignment:
Q  371 tgtttggatcatcttatttgagtttatctactgacat-aagttttgtgagactctttga 428  Q
    ||||||||| | |||||||||||||||||| |||||| ||  |||||||||||||||||    
T  55870261 tgtttggattaacttatttgagtttatctaatgacataaacatttgtgagactctttga 55870319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 451
Target Start/End: Original strand, 26783 - 26864
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||   |||||||||| ||||| |||| |||||| ||||| ||||| |||   |||| |||||||||||||||||    
T  26783 ctgtttggattggcttatttgagcttatcaactggcataagctttgttagactgtttccgagaaattatgaaaacagcttat 26864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 4304100 - 4304153
Alignment:
Q  402 tgacataagttttgtgagactctttgacagaatttatgaaaacagcttataaca 455  Q
    ||||||||||||||||| ||| ||||| |||| |||||||||||  ||||||||    
T  4304100 tgacataagttttgtgaaactgtttgagagaacttatgaaaacaatttataaca 4304153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 451
Target Start/End: Complemental strand, 18815175 - 18815094
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||   |||||||||| ||| |||||  |||||||||||||||||| ||||| |||| | || || |||||||||    
T  18815175 ctgtttggattggcttatttgagcttacctactagcataagttttgtgagactgtttgagagaactaataaagacagcttat 18815094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 456
Target Start/End: Complemental strand, 20719834 - 20719769
Alignment:
Q  391 agtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||||||||||  ||||||||||||| |||| ||||  |||| ||| ||||||||||||| ||||    
T  20719834 agtttatctactagcataagttttgtgcgactatttggaagaacttaagaaaacagcttatgacat 20719769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 427
Target Start/End: Complemental strand, 44798008 - 44797975
Alignment:
Q  394 ttatctactgacataagttttgtgagactctttg 427  Q
    ||||||||||||||||||||||||||||| ||||    
T  44798008 ttatctactgacataagttttgtgagactgtttg 44797975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 456
Target Start/End: Original strand, 49939882 - 49939955
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||||| || |||||||||  |||||| ||||||||||| ||||  |||| ||||||||| ||||||| ||||    
T  49939882 cttatttaagcttatctactagcataagctttgtgagactatttggaagaacttatgaaaagagcttatgacat 49939955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 456
Target Start/End: Original strand, 2236914 - 2236985
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||||||  ||||||||||||||||| ||| ||||||| ||||| | || ||||||||||| ||||| ||||    
T  2236914 ttatttgaacttatctactgacataag-tttatgagactgtttgagataacttatgaaaacaacttatcacat 2236985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 422
Target Start/End: Complemental strand, 8705077 - 8705041
Alignment:
Q  386 atttgagtttatctactgacataagttttgtgagact 422  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  8705077 atttgagcttatctattgacataagttttgtgagact 8705041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 451
Target Start/End: Complemental strand, 22030342 - 22030274
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||| || |||| |  ||||||||||||||| || ||||  |||| |||||||||||||||||    
T  22030342 cttatttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttat 22030274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 451
Target Start/End: Complemental strand, 22523818 - 22523750
Alignment:
Q  384 ttatttgagtttatctactgacataagt-tttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||| ||||||||||||||||||||||  |||||||||| |||||   || ||||||||| |||||||    
T  22523818 ttattcgagtttatctactgacataagtacttgtgagactgtttgagtcaacttatgaaaatagcttat 22523750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 27330007 - 27330075
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||| || ||||||||| ||||||||||  ||||| | ||||| || ||||||||||||| |||||    
T  27330007 cttatttaagcttatctacttacataagtttaatgagattgtttgagaggatttatgaaaacaacttat 27330075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 451
Target Start/End: Complemental strand, 29774379 - 29774311
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||||||| |||||||   |||||||||||||| |||   |||| ||||||||| |||||||    
T  29774379 cttatttgagtttatttactgactagagttttgtgagactgtttaggagaacttatgaaaatagcttat 29774311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 10758188 - 10758256
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||  |||||| || ||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  10758188 cttatttgaacttatctgctaacataagttttgtgagactgtttgatagaatttatgaaaacagcttat 10758256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 35534544 - 35534612
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||| |||| || ||||||||||||||    
T  35534544 cttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttat 35534612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 451
Target Start/End: Original strand, 30251372 - 30251453
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||   |||||||||| |||||||||||||||||||| |||||||| ||||  |||| ||| |||||||||||||    
T  30251372 ctgtttggattggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttat 30251453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 446
Target Start/End: Original strand, 43717865 - 43717928
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacag 446  Q
    |||||||||| ||||||| ||||||||||||||||||||| ||||  |||| ||||||||||||    
T  43717865 cttatttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaacag 43717928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 456
Target Start/End: Original strand, 1058008 - 1058081
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||  |||| || ||||||| |||||| ||||    
T  1058008 cttatttgagcttatctacttacataagttttgtgagactgtttgggagaacttttgaaaactgcttatgacat 1058081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 394 - 455
Target Start/End: Complemental strand, 28763496 - 28763435
Alignment:
Q  394 ttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataaca 455  Q
    ||||||| | ||||||||||||||||||| ||||  |||| |||||||||||||||||||||    
T  28763496 ttatctagtaacataagttttgtgagactgtttgggagaacttatgaaaacagcttataaca 28763435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 448
Target Start/End: Complemental strand, 38648490 - 38648425
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagct 448  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||  |||  ||||||||||||||    
T  38648490 cttatttaagattatctactgacataagttttgtgagactgtttgggagaccttatgaaaacagct 38648425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 458
Target Start/End: Original strand, 2487939 - 2488015
Alignment:
Q  383 cttatttgagtttatctactgacataagtt-ttgtgagactctttgacagaatttatgaaaacagcttataacatgt 458  Q
    |||||||||||| |||||||||||||||   |||||||||| ||||  |||| ||||||||||| ||||||||||||    
T  2487939 cttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaacttataacatgt 2488015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 427
Target Start/End: Original strand, 9130238 - 9130294
Alignment:
Q  371 tgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttg 427  Q
    ||||||||| | |||||||||| |||||||||| |||||||||||||||||| ||||    
T  9130238 tgtttggattagcttatttgagcttatctactggcataagttttgtgagactatttg 9130294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 446
Target Start/End: Complemental strand, 15180691 - 15180616
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacag 446  Q
    ||||||||||   ||||||||||||||||||||| |||||||||| ||||||| ||||  ||||||| |||||||||    
T  15180691 ctgtttggattggcttatttgagtttatctactgccataagttttatgagactttttg-gagaatttctgaaaacag 15180616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 451
Target Start/End: Complemental strand, 26771403 - 26771336
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||| |||| |||||||| | |||||||||||||||||| ||||  |||| |||||||||||||||||    
T  26771403 ttatctgagcttatctacgggcataagttttgtgagactgtttgggagaacttatgaaaacagcttat 26771336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 371 - 422
Target Start/End: Original strand, 30657696 - 30657747
Alignment:
Q  371 tgtttggatcatcttatttgagtttatctactgacataagttttgtgagact 422  Q
    ||||||||||  |||||||||||||||||| |||||||| ||||||||||||    
T  30657696 tgtttggatcgacttatttgagtttatctaatgacataaattttgtgagact 30657747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 451
Target Start/End: Complemental strand, 38750495 - 38750428
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||||||||||||  |||||||||||||||| | ||||| |||| |||||| |||| |||||    
T  38750495 ttatttgagtttatctacttgcataagttttgtgagattatttgaaagaacttatgagaacaccttat 38750428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 449
Target Start/End: Original strand, 35749501 - 35749567
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagctt 449  Q
    |||| ||||| ||||||| |||||||||||||| ||| || ||||| |||| |||||||||||||||    
T  35749501 cttaattgagcttatctattgacataagttttgcgaggctgtttgagagaacttatgaaaacagctt 35749567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 451
Target Start/End: Complemental strand, 38602479 - 38602400
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||   |||||||||| |||||||||||||||||||||||||| || ||||  |||| ||||  |||||||||||    
T  38602479 ctgtttggattgacttatttgagcttatctactgacataagttttgtgaggctgtttgggagaacttat--aaacagcttat 38602400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 382 - 427
Target Start/End: Complemental strand, 6525957 - 6525912
Alignment:
Q  382 tcttatttgagtttatctactgacataagttttgtgagactctttg 427  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||    
T  6525957 tcttatttgagtttatctactaacataagttttgtgtgactgtttg 6525912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 11376842 - 11376766
Alignment:
Q  383 cttatttgagtttatctactgacataagtt-ttgtgagactctttgacagaatttatgaaaacagcttataacatgt 458  Q
    |||||||||| ||||||||||| ||||||| |||||||||| ||||  |||| ||||||||| ||||| | ||||||    
T  11376842 cttatttgagcttatctactgatataagttcttgtgagactatttgggagaacttatgaaaatagcttgtgacatgt 11376766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 449
Target Start/End: Original strand, 36963271 - 36963351
Alignment:
Q  369 tctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagctt 449  Q
    |||||||||||   |||||||||| | |||||||| |||||||||||||||||| ||||  |||| |||  ||||||||||    
T  36963271 tctgtttggattggcttatttgagctaatctactggcataagttttgtgagactgtttgggagaacttacaaaaacagctt 36963351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 450
Target Start/End: Complemental strand, 27028970 - 27028903
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagctta 450  Q
    |||||||||||||||| |||| ||||||||| |||||| | ||||  |||| || |||||||||||||    
T  27028970 cttatttgagtttatccactggcataagtttagtgagattgtttgggagaaattctgaaaacagctta 27028903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 455
Target Start/End: Complemental strand, 41589724 - 41589653
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataaca 455  Q
    ||||||||| || |||||||||||||| ||| ||||||| |||   |||| ||||||||||| |||||||||    
T  41589724 ttatttgagcttgtctactgacataagctttttgagactgttttggagaacttatgaaaacaacttataaca 41589653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 456
Target Start/End: Original strand, 3536875 - 3536949
Alignment:
Q  382 tcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||||||||| |||||||||| |||||| |||||| |||| || || ||||||||   ||||||||||| ||||    
T  3536875 tcttatttgagcttatctactggcataagctttgtgtgactattcgagagaatttacagaaacagcttatgacat 3536949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 446
Target Start/End: Original strand, 12497004 - 12497066
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacag 446  Q
    ||||||||| |||||| ||| |||||||||||||||||| ||||| |||| || | |||||||    
T  12497004 ttatttgagcttatctcctggcataagttttgtgagactgtttgagagaacttctaaaaacag 12497066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 32213271 - 32213221
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgaga 420  Q
    ||||||||||  ||||||||||| |||| |||||| |||||||||||||||    
T  32213271 ctgtttggattgtcttatttgagcttatatactgatataagttttgtgaga 32213221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 445
Target Start/End: Original strand, 37822591 - 37822653
Alignment:
Q  384 ttatttgagtttatctactgacataagt-tttgtgagactctttgacagaatttatgaaaaca 445  Q
    ||||||||||||||||| |||||||| | ||||||||||| ||||| | ||||||| ||||||    
T  37822591 ttatttgagtttatctaatgacataattatttgtgagactgtttgagaaaatttattaaaaca 37822653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 451
Target Start/End: Original strand, 42893407 - 42893489
Alignment:
Q  369 tctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||| | ||||||||||||||||||| | ||||| |||||||  | | ||||  |||| |||| ||||||||||||    
T  42893407 tctgtttggattaacttatttgagtttatctaccggcataatttttgtgctagtgtttgggagaacttataaaaacagcttat 42893489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 448
Target Start/End: Original strand, 922338 - 922403
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagct 448  Q
    ||||||||||||||| ||||||| |||||||||||| ||| ||||  | |||||||  ||||||||    
T  922338 cttatttgagtttatatactgacctaagttttgtgatactgtttgggataatttatagaaacagct 922403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 420
Target Start/End: Complemental strand, 1096629 - 1096592
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgaga 420  Q
    ||||||||||||||| || |||||||||||||||||||    
T  1096629 cttatttgagtttatttagtgacataagttttgtgaga 1096592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 13821986 - 13822035
Alignment:
Q  394 ttatctactgacataagttttgtgagactctttgacagaatttatgaaaa 443  Q
    ||||||| ||||||||||||||||||||| ||||| | ||||||| ||||    
T  13821986 ttatctagtgacataagttttgtgagactgtttgagaaaatttataaaaa 13822035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 420
Target Start/End: Original strand, 15247708 - 15247745
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgaga 420  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  15247708 cttatttgaatttatctacttacataagttttgtgaga 15247745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 456
Target Start/End: Original strand, 32840917 - 32840990
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||| ||||| ||||||||| ||| |||||||| |||||| ||||  |||| ||||||||||| ||||| ||||    
T  32840917 cttacttgagcttatctactcacacaagttttgcgagactgtttgggagaacttatgaaaacaacttatgacat 32840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 455
Target Start/End: Complemental strand, 12976351 - 12976279
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataaca 455  Q
    |||||||||| |||||||||  |||||| ||||||||||| |||   |||| |||||| |||||||| |||||    
T  12976351 cttatttgagcttatctactagcataaggtttgtgagactgtttagtagaacttatgagaacagcttctaaca 12976279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 420
Target Start/End: Original strand, 16915839 - 16915875
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgaga 420  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  16915839 ttatttgagtttatctacttacataaattttgtgaga 16915875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 457
Target Start/End: Complemental strand, 27754520 - 27754468
Alignment:
Q  405 cataagttttgtgagactctttgacagaatttatgaaaacagcttataacatg 457  Q
    |||||||||||||||||| ||||  |||| |||||||||||| |||| |||||    
T  27754520 cataagttttgtgagactatttgggagaacttatgaaaacagtttatgacatg 27754468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 410
Target Start/End: Original strand, 44236741 - 44236781
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataag 410  Q
    |||||||||| | ||||||||||||||||||||| ||||||    
T  44236741 ctgtttggattaccttatttgagtttatctactggcataag 44236781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 449
Target Start/End: Complemental strand, 44590163 - 44590097
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagctt 449  Q
    ||||||||||||||||||  |||||||||||||||||||  ||||| |||| |||||||||||||||    
T  44590163 cttatttgagtttatctatagacataagttttgtgagaccgtttgaaagaacttatgaaaacagctt 44590097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 451
Target Start/End: Complemental strand, 26202180 - 26202099
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||| | |||||||||  |||||| |||||||||||||||||||| ||||||  ||||||||||| |||| |||||    
T  26202180 ctgtttggattaacttatttgaacttatctgctgacataagttttgtgagattctttgctagaatttatgagaacaacttat 26202099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 451
Target Start/End: Complemental strand, 27317531 - 27317450
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||   |||||||||| |||||||| |||||||||||| ||||||| ||||| |||| ||||||||||| |||||    
T  27317531 ctgtttggattgacttatttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaacaacttat 27317450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 42419932 - 42419859
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||||||||||||||| |||||||||||||| ||||||| ||||  |||| ||| ||||||||||||| ||||    
T  42419932 cttatttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaacagcttatgacat 42419859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 451
Target Start/End: Original strand, 7928216 - 7928297
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||   |||||||||| ||||||| ||||||||||| ||||||||| || || |||| || ||||||||||||||    
T  7928216 ctgtttggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttat 7928297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 451
Target Start/End: Original strand, 10619154 - 10619219
Alignment:
Q  386 atttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||||||||||||| |||||||||||||| | |||  |||| | |||||||||||||||    
T  10619154 atttgagtttatctactgacacaagttttgtgagaccccttgggagaactcatgaaaacagcttat 10619219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 456
Target Start/End: Original strand, 42659142 - 42659215
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||| |||| ||||| |||||||||||||||||| ||||  |||| || |||||||||||||| ||||    
T  42659142 cttatttgagcttatttactggcataagttttgtgagactgtttgggagaagttttgaaaacagcttatgacat 42659215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 443
Target Start/End: Complemental strand, 30331890 - 30331830
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaa 443  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||  |||| |||||||||    
T  30331890 cttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaa 30331830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 450
Target Start/End: Complemental strand, 31744450 - 31744370
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagctta 450  Q
    ||||||||||   |||||||| | |||||||| |||||||||||| ||||||| ||||| |||| || |||||||||||||    
T  31744450 ctgtttggattggcttatttgggcttatctaccgacataagttttctgagactgtttgagagaacttttgaaaacagctta 31744370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 451
Target Start/End: Original strand, 15757590 - 15757657
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||| |||| ||||| ||||||||||||||||||  |||  ||||||||||||||| ||||||    
T  15757590 ttatttgagcttatttactggcataagttttgtgagactgcttgggagaatttatgaaaactgcttat 15757657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 449
Target Start/End: Complemental strand, 2416452 - 2416386
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagctt 449  Q
    |||||||||||||||||||| ||||||||||||||| |||  |||  |||| |||| ||||||||||    
T  2416452 cttatttgagtttatctactaacataagttttgtgaaactgcttggaagaacttattaaaacagctt 2416386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 456
Target Start/End: Original strand, 19608567 - 19608637
Alignment:
Q  386 atttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||  |||| |||| || ||||||||| ||||    
T  19608567 atttgagtttatctactgacataggttttatgagactgtttgcgagaacttataaacacagcttatgacat 19608637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 421
Target Start/End: Complemental strand, 18179102 - 18179050
Alignment:
Q  369 tctgtttggatcatcttatttgagtttatctactgacataagttttgtgagac 421  Q
    |||||||||||   |||||||||| ||||||||| ||||||||||||||||||    
T  18179102 tctgtttggattgacttatttgagcttatctactaacataagttttgtgagac 18179050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 451
Target Start/End: Complemental strand, 36125497 - 36125432
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||||||||||||| |||||||| ||||||| | ||  | ||||| ||||||||||||||||    
T  36125497 ttatttgagtttatctactggcataagttctgtgagagtgtt--agagaatatatgaaaacagcttat 36125432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 451
Target Start/End: Original strand, 43279469 - 43279528
Alignment:
Q  394 ttatctactgacataagttttgtgagactcttt--gacagaatttatgaaaacagcttat 451  Q
    |||||||||  |||||||||||||||||| |||  || ||||||||||||||||||||||    
T  43279469 ttatctactagcataagttttgtgagactgtttgggagagaatttatgaaaacagcttat 43279528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 451
Target Start/End: Complemental strand, 1626038 - 1625971
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||| |||||  |||||||||||||||| ||||| ||||| |||| ||||||||  |||||||    
T  1626038 ttatttgagcttatcccctgacataagttttgtaagactatttgagagaacttatgaaagtagcttat 1625971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 422
Target Start/End: Complemental strand, 3312216 - 3312177
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagact 422  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  3312216 cttatttgagcttatctactgacgtaagttttgtgagact 3312177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 451
Target Start/End: Original strand, 39659445 - 39659508
Alignment:
Q  388 ttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||| |||||||||||||||||||| ||||| || | ||| |||| ||| |||||||||||||    
T  39659445 ttgagcttatctactgacataagtttcgtgaggctgtctgagagaacttacgaaaacagcttat 39659508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 2142793 - 2142731
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaaca 445  Q
    |||||||||||||||||||   |||||||||| ||||||| ||||  |||| |||||||||||    
T  2142793 cttatttgagtttatctacatgcataagttttatgagactgtttgggagaacttatgaaaaca 2142731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 456
Target Start/End: Complemental strand, 4607077 - 4606991
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||||||||   |||||||||| ||||||||  | ||||||||||||||||| ||||  |||| || |||||||| ||||| ||||    
T  4607077 ctgtttggattggcttatttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaacttatgacat 4606991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 456
Target Start/End: Complemental strand, 18066256 - 18066194
Alignment:
Q  394 ttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||||||||||||||||||||||| ||| |||   | || ||||||||||||||||| ||||    
T  18066256 ttatctactgacataagttttgtgaaactgttttgtacaacttatgaaaacagcttatgacat 18066194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 421
Target Start/End: Original strand, 29628673 - 29628711
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagac 421  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  29628673 cttatttgagcttatctactgtcataagttttgtgagac 29628711  T

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Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 453
Target Start/End: Complemental strand, 36534907 - 36534837
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataa 453  Q
    |||||||||| |||| | ||  |||||||||||||||||| ||||  | || |||||||||||||||||||    
T  36534907 cttatttgagcttatatgctttcataagttttgtgagactgtttgggataacttatgaaaacagcttataa 36534837  T

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Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 448
Target Start/End: Complemental strand, 750809 - 750744
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagct 448  Q
    ||||||||||||||||| ||| |||| ||||||||||| | ||||  |||| ||||||||| ||||    
T  750809 cttatttgagtttatctcctggcatatgttttgtgagagtgtttgcaagaacttatgaaaagagct 750744  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 420
Target Start/End: Original strand, 12464404 - 12464441
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgaga 420  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  12464404 cttatttgagtgtatctactaacataagttttgtgaga 12464441  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 456
Target Start/End: Complemental strand, 13325721 - 13325636
Alignment:
Q  371 tgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||||||||| |||||||||| ||||| | ||| ||||||||| ||||| | || |  |||| || |||||||||||||| ||||    
T  13325721 tgtttggatcagcttatttgagcttatcaattgatataagttttatgagattgttcgggagaacttttgaaaacagcttatgacat 13325636  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 427
Target Start/End: Complemental strand, 15305826 - 15305769
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttg 427  Q
    ||||||||||   |||||||||| ||||||| ||||||||||||||||| ||| ||||    
T  15305826 ctgtttggattggcttatttgagcttatctattgacataagttttgtgaaactgtttg 15305769  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 458
Target Start/End: Complemental strand, 32837431 - 32837386
Alignment:
Q  413 ttgtgagactctttgacagaatttatgaaaacagcttataacatgt 458  Q
    |||||||||| ||||  |||| ||||||||||||||||||||||||    
T  32837431 ttgtgagactgtttgggagaacttatgaaaacagcttataacatgt 32837386  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 446
Target Start/End: Complemental strand, 3978743 - 3978667
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacag 446  Q
    |||||||||| | ||||||| ||||||| || ||| ||||||||| ||||||| ||| | ||||  |||||||||||    
T  3978743 ctgtttggattaacttatttcagtttatgtaatgatataagttttatgagactgtttcagagaacatatgaaaacag 3978667  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 411
Target Start/End: Complemental strand, 9886456 - 9886416
Alignment:
Q  371 tgtttggatcatcttatttgagtttatctactgacataagt 411  Q
    ||||||||||| ||||||||| ||||||||||| |||||||    
T  9886456 tgtttggatcaacttatttgaatttatctactggcataagt 9886416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 451
Target Start/End: Complemental strand, 20952494 - 20952426
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||||| |||| ||||| || ||||||||| ||||| ||| | |||| |||||||||||| ||||    
T  20952494 cttatttgagcttatatactggcaaaagttttgttagactatttaagagaacttatgaaaacagtttat 20952426  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 23974424 - 23974492
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||||| |||||||||||||||| || || |||||| | |||   |||| |||||||||||||||||    
T  23974424 cttatttgggtttatctactgacatgagattagtgagattgttttggagaacttatgaaaacagcttat 23974492  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 440
Target Start/End: Original strand, 39073634 - 39073690
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatga 440  Q
    ||||||||||| |||||| ||||||| |||||||||||| ||||  |||| ||||||    
T  39073634 ttatttgagttcatctaccgacataatttttgtgagactgtttggaagaacttatga 39073690  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 451
Target Start/End: Complemental strand, 41851670 - 41851606
Alignment:
Q  387 tttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    |||||| ||||||| ||||| |||||||||||||||  |||  |||||||||| ||||| |||||    
T  41851670 tttgagcttatctattgacaaaagttttgtgagactgattgggagaatttatggaaacaacttat 41851606  T

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Target: chr6 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 458
Target Start/End: Original strand, 34404644 - 34404732
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacatgt 458  Q
    ||||||||||   |||||||||||||||| |||||||||||||||||| || ||||||  |||| ||||||||| | ||||| ||||||    
T  34404644 ctgtttggatttacttatttgagtttatcaactgacataagttttgtgtgagtctttgggagaacttatgaaaatatcttatgacatgt 34404732  T

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Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 451
Target Start/End: Complemental strand, 6538666 - 6538585
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||||||  |||||||||||||||| || || ||||||||| |||||||| || |  |||||| |||||||||||||||    
T  6538666 ctgtttggattgtcttatttgagtttatgtagtggcataagtttggtgagactgttcgggagaattgatgaaaacagcttat 6538585  T

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Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 450
Target Start/End: Complemental strand, 33089645 - 33089577
Alignment:
Q  383 cttatttgagtttatctactgacataagt-tttgtgagactctttgacagaatttatgaaaacagctta 450  Q
    |||||||||| ||||||||||||||| || ||||||||||| ||| | |||| ||||||||||||||||    
T  33089645 cttatttgagcttatctactgacatatgtatttgtgagactatttcagagaacttatgaaaacagctta 33089577  T

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Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 449
Target Start/End: Complemental strand, 13907722 - 13907658
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagctt 449  Q
    |||||||||||||||||| || |||||||||  ||||||  ||||| ||||||||||||||||||||    
T  13907722 cttatttgagtttatctagtggcataagttt--tgagacggtttgagagaatttatgaaaacagctt 13907658  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 458
Target Start/End: Complemental strand, 31624413 - 31624321
Alignment:
Q  369 tctgtttggatcatcttatttgagtttatctactgacataag---ttttgtgagactctttgacagaatttatgaaaacagcttataacatgt 458  Q
    |||||||||||   |||||||||| |||| ||||||||||||   ||||| |||||| ||||  ||||||||||||||||||| || ||||||    
T  31624413 tctgtttggattggcttatttgagcttatatactgacataagctgttttgagagactgtttggtagaatttatgaaaacagctcatgacatgt 31624321  T

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Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 456
Target Start/End: Original strand, 34910340 - 34910413
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||||||||||||||| || ||||||| |||| | ||||  ||||  |||||||||||||||| ||||    
T  34910340 cttatttgagtttatctactgatatcagttttgggagattgtttggaagaaactatgaaaacagcttatgacat 34910413  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 658463 - 658499
Alignment:
Q  386 atttgagtttatctactgacataagttttgtgagact 422  Q
    ||||||||||||||| |||||||||||||||||||||    
T  658463 atttgagtttatctattgacataagttttgtgagact 658499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 456
Target Start/End: Complemental strand, 2455397 - 2455325
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||||||| ||||||||  |||||||||| |||| ||| ||||| |||| ||||||||||| ||||| ||||    
T  2455397 ttatttgagcttatctacaaacataagtttggtgaaactatttgagagaacttatgaaaacaacttattacat 2455325  T

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Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 456
Target Start/End: Original strand, 9559358 - 9559426
Alignment:
Q  388 ttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    ||||| ||||||| || |||||||||||||||||| |||   |||| |||||||||||||||| |||||    
T  9559358 ttgagattatctattggcataagttttgtgagactgtttaggagaagttatgaaaacagcttacaacat 9559426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 458
Target Start/End: Original strand, 20368127 - 20368187
Alignment:
Q  398 ctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacatgt 458  Q
    ||||||||||||||||||| ||||| ||||  |||| ||||||||||| ||||| ||||||    
T  20368127 ctactgacataagttttgtaagactatttgggagaacttatgaaaacaacttatgacatgt 20368187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 418
Target Start/End: Complemental strand, 6536763 - 6536716
Alignment:
Q  371 tgtttggatcatcttatttgagtttatctactgacataagttttgtga 418  Q
    ||||||||| |  ||||||||||||| |||||||||||||||||||||    
T  6536763 tgtttggattaaattatttgagtttacctactgacataagttttgtga 6536716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 10645319 - 10645378
Alignment:
Q  386 atttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaaca 445  Q
    ||||||| ||||||| ||||||||||||||| ||||| ||||  |||| |||||||||||    
T  10645319 atttgaggttatctaatgacataagttttgtaagactgtttgggagaacttatgaaaaca 10645378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 420
Target Start/End: Original strand, 21405071 - 21405122
Alignment:
Q  369 tctgtttggatcatcttatttgagtttatctactgacataagttttgtgaga 420  Q
    |||||||||||   |||||||||| |||| ||||||||||||||||||||||    
T  21405071 tctgtttggattgacttatttgagcttatatactgacataagttttgtgaga 21405122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 451
Target Start/End: Original strand, 26559160 - 26559239
Alignment:
Q  373 tttggatcatcttatttgagtttatctactgacataag-ttttgtgagactctttgacagaatttatgaaaacagcttat 451  Q
    ||||||| | |||||||||||||| |||||| ||||||  ||||||||||| ||||  |||| ||||||||||| |||||    
T  26559160 tttggattaacttatttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaacaacttat 26559239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 422
Target Start/End: Original strand, 35069543 - 35069582
Alignment:
Q  383 cttatttgagtttatctactgacataagttttgtgagact 422  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  35069543 cttatttgagcttatctactgacataagttttgtaagact 35069582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 2455126 - 2455066
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaac 444  Q
    ||||||||  ||||||||| ||||||||||||||||||| ||||  |||| || |||||||    
T  2455126 ttatttgaacttatctactaacataagttttgtgagactgtttgggagaacttctgaaaac 2455066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 410
Target Start/End: Original strand, 7785662 - 7785702
Alignment:
Q  370 ctgtttggatcatcttatttgagtttatctactgacataag 410  Q
    ||||||||||  |||||||||| ||||||||||||||||||    
T  7785662 ctgtttggattgtcttatttgaatttatctactgacataag 7785702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 456
Target Start/End: Complemental strand, 24759 - 24687
Alignment:
Q  384 ttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 456  Q
    |||||||||  |||||| || |||| ||||||||||||| ||||  |||| |||| |||||||||||| ||||    
T  24759 ttatttgagcgtatctattggcatatgttttgtgagactgtttgggagaacttatcaaaacagcttatgacat 24687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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