View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7750_low_2 (Length: 743)

Name: NF7750_low_2
Description: NF7750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7750_low_2
NF7750_low_2
[»] chr2 (19 HSPs)
chr2 (380-725)||(21835595-21835945)
chr2 (139-257)||(24741621-24741738)
chr2 (17-92)||(24741513-24741588)
chr2 (288-370)||(24741771-24741853)
chr2 (322-370)||(14573261-14573309)
chr2 (322-371)||(21471016-21471065)
chr2 (322-370)||(21471954-21472002)
chr2 (320-371)||(5276464-5276515)
chr2 (315-370)||(33433153-33433208)
chr2 (322-372)||(37547996-37548046)
chr2 (322-372)||(38834636-38834686)
chr2 (322-371)||(4478850-4478899)
chr2 (322-371)||(19521917-19521966)
chr2 (322-371)||(24727820-24727869)
chr2 (322-370)||(4479702-4479750)
chr2 (322-370)||(13134318-13134366)
chr2 (322-369)||(16649705-16649752)
chr2 (322-371)||(2650228-2650277)
chr2 (330-371)||(14574007-14574048)
[»] chr3 (26 HSPs)
chr3 (153-263)||(32996801-32996912)
chr3 (14-95)||(32996678-32996759)
chr3 (293-370)||(32996936-32997014)
chr3 (322-371)||(36750437-36750486)
chr3 (322-371)||(37105077-37105126)
chr3 (322-370)||(45242987-45243035)
chr3 (322-370)||(49757182-49757230)
chr3 (322-369)||(42145278-42145325)
chr3 (322-372)||(14667295-14667344)
chr3 (322-371)||(43638078-43638127)
chr3 (195-263)||(5354405-5354473)
chr3 (322-370)||(19132812-19132860)
chr3 (322-370)||(32489946-32489994)
chr3 (322-370)||(38742174-38742222)
chr3 (322-370)||(46721958-46722006)
chr3 (323-370)||(21811879-21811926)
chr3 (323-370)||(31556217-31556264)
chr3 (322-369)||(38922744-38922791)
chr3 (324-371)||(41755498-41755545)
chr3 (324-370)||(17226968-17227014)
chr3 (320-370)||(17227946-17227996)
chr3 (322-368)||(32994927-32994973)
chr3 (322-372)||(44687163-44687213)
chr3 (322-371)||(25329382-25329431)
chr3 (322-371)||(32490195-32490244)
chr3 (322-359)||(37104363-37104400)
[»] chr8 (27 HSPs)
chr8 (180-263)||(25876629-25876712)
chr8 (294-371)||(7424534-7424611)
chr8 (294-371)||(25876520-25876597)
chr8 (180-263)||(7424421-7424504)
chr8 (322-371)||(34992264-34992313)
chr8 (320-371)||(61453-61504)
chr8 (320-370)||(1365829-1365879)
chr8 (322-371)||(41859309-41859358)
chr8 (322-370)||(27918047-27918095)
chr8 (322-372)||(30272956-30273006)
chr8 (320-370)||(39254787-39254837)
chr8 (322-371)||(5034897-5034946)
chr8 (322-370)||(36936418-36936466)
chr8 (322-370)||(36936697-36936745)
chr8 (322-370)||(42345166-42345214)
chr8 (322-369)||(28090658-28090705)
chr8 (320-371)||(39255750-39255801)
chr8 (320-371)||(44751607-44751658)
chr8 (320-370)||(216393-216443)
chr8 (320-370)||(692953-693003)
chr8 (320-370)||(697162-697212)
chr8 (320-370)||(730016-730066)
chr8 (320-370)||(853911-853961)
chr8 (321-370)||(62239-62288)
chr8 (322-363)||(4364046-4364087)
chr8 (322-363)||(37639718-37639759)
chr8 (322-371)||(42346560-42346609)
[»] chr4 (32 HSPs)
chr4 (294-373)||(42544485-42544564)
chr4 (180-262)||(42544596-42544678)
chr4 (322-374)||(52757809-52757861)
chr4 (287-370)||(23865282-23865365)
chr4 (322-365)||(3847891-3847934)
chr4 (320-371)||(47198604-47198655)
chr4 (322-372)||(11417685-11417735)
chr4 (322-372)||(29651332-29651382)
chr4 (322-371)||(26611283-26611332)
chr4 (322-365)||(3848578-3848621)
chr4 (322-372)||(10425059-10425109)
chr4 (322-372)||(48013315-48013365)
chr4 (322-371)||(28684232-28684281)
chr4 (322-371)||(30478308-30478357)
chr4 (322-371)||(31836460-31836509)
chr4 (322-371)||(47377598-47377647)
chr4 (322-370)||(10424123-10424171)
chr4 (322-370)||(11417937-11417985)
chr4 (322-370)||(21165447-21165495)
chr4 (322-370)||(25371545-25371593)
chr4 (322-370)||(36865717-36865765)
chr4 (322-370)||(37275088-37275136)
chr4 (322-370)||(38694954-38695002)
chr4 (322-370)||(39523271-39523319)
chr4 (322-370)||(42545563-42545611)
chr4 (322-370)||(45235960-45236008)
chr4 (323-371)||(46765169-46765217)
chr4 (320-364)||(55159186-55159230)
chr4 (320-371)||(55160065-55160115)
chr4 (322-372)||(21166375-21166425)
chr4 (321-371)||(47199394-47199444)
chr4 (322-363)||(25655639-25655680)
[»] chr6 (20 HSPs)
chr6 (17-92)||(24549639-24549714)
chr6 (322-370)||(3543063-3543111)
chr6 (322-368)||(3542816-3542862)
chr6 (322-371)||(7159341-7159390)
chr6 (322-371)||(7193337-7193386)
chr6 (322-370)||(33480628-33480676)
chr6 (322-368)||(33479698-33479744)
chr6 (322-371)||(14337557-14337606)
chr6 (293-370)||(33078285-33078362)
chr6 (322-370)||(7531829-7531877)
chr6 (322-370)||(15083318-15083366)
chr6 (322-370)||(22579935-22579983)
chr6 (322-366)||(22582479-22582523)
chr6 (322-366)||(22587310-22587354)
chr6 (322-373)||(7532440-7532491)
chr6 (322-372)||(7158433-7158483)
chr6 (320-370)||(9574569-9574619)
chr6 (323-365)||(10607406-10607448)
chr6 (202-263)||(24551481-24551541)
chr6 (322-363)||(33018416-33018457)
[»] chr7 (17 HSPs)
chr7 (322-374)||(37864307-37864359)
chr7 (322-371)||(37468909-37468958)
chr7 (322-371)||(38778853-38778902)
chr7 (322-371)||(41194512-41194561)
chr7 (322-370)||(668179-668227)
chr7 (322-370)||(17145622-17145670)
chr7 (322-370)||(37469005-37469053)
chr7 (322-370)||(38779563-38779611)
chr7 (322-372)||(4261596-4261646)
chr7 (322-368)||(7677809-7677855)
chr7 (322-370)||(669103-669151)
chr7 (322-373)||(38071895-38071946)
chr7 (322-372)||(29315311-29315361)
chr7 (322-372)||(41224843-41224893)
chr7 (322-363)||(20890206-20890247)
chr7 (322-371)||(29006346-29006395)
chr7 (323-372)||(47331954-47332003)
[»] chr1 (21 HSPs)
chr1 (322-370)||(49610706-49610754)
chr1 (322-372)||(1012545-1012595)
chr1 (322-371)||(51974436-51974485)
chr1 (322-371)||(51987826-51987875)
chr1 (322-370)||(16270207-16270255)
chr1 (322-370)||(23440865-23440913)
chr1 (320-372)||(35616773-35616825)
chr1 (322-370)||(43737729-43737777)
chr1 (322-372)||(45064684-45064734)
chr1 (322-371)||(43737978-43738027)
chr1 (322-371)||(48972445-48972494)
chr1 (322-370)||(193850-193898)
chr1 (322-370)||(194701-194749)
chr1 (322-370)||(8560839-8560887)
chr1 (322-370)||(9947995-9948043)
chr1 (322-370)||(9948887-9948935)
chr1 (320-364)||(48870751-48870795)
chr1 (322-370)||(51988464-51988512)
chr1 (320-370)||(37874064-37874114)
chr1 (322-368)||(38931247-38931293)
chr1 (323-372)||(8561737-8561786)
[»] chr5 (19 HSPs)
chr5 (322-364)||(4607470-4607512)
chr5 (322-371)||(8204119-8204168)
chr5 (322-371)||(12190158-12190207)
chr5 (322-370)||(15184017-15184065)
chr5 (320-371)||(13654932-13654983)
chr5 (323-370)||(39950404-39950451)
chr5 (322-372)||(33002816-33002866)
chr5 (322-371)||(8226641-8226690)
chr5 (322-371)||(36626630-36626679)
chr5 (322-370)||(686417-686464)
chr5 (322-370)||(16971033-16971081)
chr5 (322-370)||(26688166-26688214)
chr5 (322-370)||(26957897-26957945)
chr5 (322-370)||(31148445-31148493)
chr5 (322-372)||(8040444-8040494)
chr5 (322-371)||(2458354-2458403)
chr5 (322-371)||(13404703-13404752)
chr5 (322-371)||(33001931-33001980)
chr5 (324-365)||(39167442-39167483)
[»] scaffold0311 (1 HSPs)
scaffold0311 (322-371)||(160-209)
[»] scaffold0041 (2 HSPs)
scaffold0041 (322-370)||(27575-27623)
scaffold0041 (322-370)||(27221-27269)


Alignment Details
Target: chr2 (Bit Score: 230; Significance: 1e-126; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 380 - 725
Target Start/End: Complemental strand, 21835945 - 21835595
Alignment:
Q  380 tattgacaacgattcctctataataggaggggtcgtttaatcaagatatgttcatgtattttcggaaggaatcttagattatcaattttcatctcatctt 479  Q
    |||||| ||||||||||| ||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  21835945 tattgataacgattcctccataataggaggggtccttgaatcaagatatgttcatgtattttcgaaaggaatcttatattatcaattttcatctcatctt 21835846  T
Q  480 tgaaaacttaatcgtataactaagaagga-gaggatttgggataatattcaaaccatagtatatcttaaatcataaatcgaccctaattttcaagc---n 575  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||        
T  21835845 tgaaaacttaatcgtataactaagaaggagggggatttgggataatattcaaatcatagtatatcttaaatcataaatagaccctaatttccaagctatt 21835746  T
Q  576 nnnnnnnatcattgtatatcttaaatcataataaactcttcacactacaaatttttatatttgctaatcaaccttagaaaattaaattaatatacaaca- 674  Q
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  || |||||     
T  21835745 tttttttatcattgtatatcttaaatcataataaactcttcacactacaaatttttatatttgctaattaaccttagaaaattaaatta--attcaacat 21835648  T
Q  675 --tagtttttatgggaagatatttttattaagatgatatattcgtgcacttgt 725  Q
      |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21835647 agtagtttttatgggacgatatttttattaagatgatatattcgtgcacttgt 21835595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 139 - 257
Target Start/End: Original strand, 24741621 - 24741738
Alignment:
Q  139 tttgatgtacgtgagagaagaagaataatataattt-atgttttaatcaatcagttttgtgctgtactggagaaatggggaggtgcagtagtaagcttgg 237  Q
    ||||||||||||||||  ||||||| |||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  24741621 tttgatgtacgtgaga--agaagaagaatataatttcatgttttaatcaatcagttttgtggtgtactgaagaaatggggaggtgcagtagtaagcttgg 24741718  T
Q  238 aaacaaaattaaaataataa 257  Q
    |||||| |||||||||||||    
T  24741719 aaacaacattaaaataataa 24741738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 24741513 - 24741588
Alignment:
Q  17 agaagaagagttgatgttctttgttggaaactgagtattgtacgcgagaagaagaacagttgatgttaagcttttt 92  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  24741513 agaagaatagttgatgttctttgttggaaactgagtattgtacgcgagaagaagtacaattgatgttaagcctttt 24741588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 288 - 370
Target Start/End: Original strand, 24741771 - 24741853
Alignment:
Q  288 cagtccaaaactgacaagtgtccttggtaaagagactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||| ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||| ||||||    
T  24741771 cagttcaaaactgacaggtgtccttggtaaagaggtttttccatggtgggaaaaaagtcttctttcccaaattaaacggcacc 24741853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 14573309 - 14573261
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  14573309 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 14573261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 21471065 - 21471016
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  21471065 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 21471016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 21471954 - 21472002
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  21471954 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 21472002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 320 - 371
Target Start/End: Complemental strand, 5276515 - 5276464
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||||| |||||| ||||||||| ||||||| |||||    
T  5276515 agactttcccatggtgggaaagaagtctcctttcccaagttaaatgccacct 5276464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 315 - 370
Target Start/End: Original strand, 33433153 - 33433208
Alignment:
Q  315 taaagagactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||||||||||||||||||||||| || ||| ||||| ||||||||| ||||||    
T  33433153 taaagagactttcccatggtgggaaagaactctcctttctcaaattaaacggcacc 33433208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 372
Target Start/End: Complemental strand, 37548046 - 37547996
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||||| ||||||| || ||| ||||||||||||||||||||||||    
T  37548046 actttcccatgatgggaaagaactctcctttcccaaattaaatggcacctt 37547996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 38834636 - 38834686
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||| ||| |||||||| ||| ||||||||||||||||||||||||    
T  38834636 actttcccacggtaggaaaaaactctcctttcccaaattaaatggcacctt 38834686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 4478899 - 4478850
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||| ||||||| |||| | |||||||||||||||||||||||    
T  4478899 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 4478850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 19521917 - 19521966
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||| ||||||| |||| | |||||||||||||||||||||||    
T  19521917 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 19521966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 24727869 - 24727820
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||| ||||| |||||||||||| | |||||||||||||||||||||||    
T  24727869 acttttccatgatgggaaaaaagtgtgctttcccaaattaaatggcacct 24727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 4479702 - 4479750
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||||||||||| |||| || ||| ||||||||||||||||||||||    
T  4479702 actttcccatggtgagaaagaactctcctttcccaaattaaatggcacc 4479750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 13134366 - 13134318
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||| ||||||||||| || ||| ||||||||||||||||||||||    
T  13134366 actttcctatggtgggaaagaactctcctttcccaaattaaatggcacc 13134318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 369
Target Start/End: Complemental strand, 16649752 - 16649705
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcac 369  Q
    ||||||||||| ||||||| |||| | |||||||||||||||||||||    
T  16649752 actttcccatgatgggaaagaagtttactttcccaaattaaatggcac 16649705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 2650277 - 2650228
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||| ||||| ||||||||||||||  |||||||||||||| |||||||    
T  2650277 acttttccatgatgggaaaaaagtctcatttcccaaattaaacggcacct 2650228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 371
Target Start/End: Original strand, 14574007 - 14574048
Alignment:
Q  330 atggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||| || ||| |||||||||||||||||||||||    
T  14574007 atggtgggaaagaactctcctttcccaaattaaatggcacct 14574048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 4e-37; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 153 - 263
Target Start/End: Original strand, 32996801 - 32996912
Alignment:
Q  153 gagaagaagaataatataattt-atgttttaatcaatcagttttgtgctgtactggagaaatggggaggtgcagtagtaagcttggaaacaaaattaaaa 251  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || |||||||    
T  32996801 gagaagaagaagaatataatttcatgttttaatcaatcagttttgtggtgtaatggagaaatggggaggtgcagtagtaagcttggaaataacattaaaa 32996900  T
Q  252 taataaattgag 263  Q
    ||||||| ||||    
T  32996901 taataaactgag 32996912  T

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Target: chr3; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 32996678 - 32996759
Alignment:
Q  14 cagagaagaagagttgatgttctttgttggaaactgagtattgtacgcgagaagaagaacagttgatgttaagctttttctg 95  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32996678 cagagaagaagagttgatgttctttgttggaaactgagtattttacgcgagaagaagaacagttgatgttaagctttttctg 32996759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 293 - 370
Target Start/End: Original strand, 32996936 - 32997014
Alignment:
Q  293 caaaactgacaagtgtccttggtaaagagactttcccatggtgg-gaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||| |||| ||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||    
T  32996936 caaaaccgacacgtgtccttggtaaagagactttcccatggtggaaaaaaaagtcttctttctcaaattaaatggcacc 32997014  T

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Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 36750437 - 36750486
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  36750437 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 36750486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 37105077 - 37105126
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||||||||||  |||||||||||||| |||||||    
T  37105077 actttcccatggtgggaaaaaagtctcgtttcccaaattaaacggcacct 37105126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 45242987 - 45243035
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  45242987 actttcccatggtggaaaagaactcttctttcccaaattaaatggcacc 45243035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 49757182 - 49757230
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  49757182 actttcccatggtaggaaaaaagtctcctttcccaaattaaacggcacc 49757230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 322 - 369
Target Start/End: Original strand, 42145278 - 42145325
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcac 369  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||||||    
T  42145278 actttcctatggtggaaaaaaagtctcctttcccaaattaaatggcac 42145325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 372
Target Start/End: Complemental strand, 14667344 - 14667295
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  14667344 actttcccatggtgggaaaaaa-tctcctttcccaaattaaacggcacctt 14667295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 43638078 - 43638127
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||| ||||||| |||| | |||||||||||||||||||||||    
T  43638078 actttcccatgatgggaaagaagtttactttcccaaattaaatggcacct 43638127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 5354405 - 5354473
Alignment:
Q  195 tgtgctgtactggagaaatggggaggtgcagtagtaagcttggaaacaaaattaaaataataaattgag 263  Q
    |||| ||||||| |||||| ||||||||||  |||||||||  | |||| |||||||||||||||||||    
T  5354405 tgtggtgtactgaagaaatagggaggtgcaacagtaagcttaaacacaacattaaaataataaattgag 5354473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 19132812 - 19132860
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||| || | | ||||||||||||||||||||||    
T  19132812 actttcccatggtgggaaagaactttcctttcccaaattaaatggcacc 19132860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 32489994 - 32489946
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||| ||| || ||| ||||||||||||||||||||||    
T  32489994 actttcccatggtggaaaagaattctcctttcccaaattaaatggcacc 32489946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 38742174 - 38742222
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||| |||| | |||||||||||||||||||||| |||||||||||||    
T  38742174 acttttccattgagggaaaaaagtcttctttcccagattaaatggcacc 38742222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 46721958 - 46722006
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||||||| | || |||||||||||||||||||||||||||| ||||    
T  46721958 actttcccatagaggaaaaaaagtcttctttcccaaattaaatgacacc 46722006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 370
Target Start/End: Complemental strand, 21811926 - 21811879
Alignment:
Q  323 ctttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||||||||| ||||||||||||  |||||||||||||| ||||||    
T  21811926 ctttcccatggtaggaaaaaagtctcatttcccaaattaaacggcacc 21811879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 370
Target Start/End: Original strand, 31556217 - 31556264
Alignment:
Q  323 ctttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||||||| ||||||| || ||| ||||||||||||||||||||||    
T  31556217 ctttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 31556264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 369
Target Start/End: Complemental strand, 38922791 - 38922744
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcac 369  Q
    ||||||||||||| ||||| || ||| |||||||||||||||||||||    
T  38922791 actttcccatggtaggaaataactctcctttcccaaattaaatggcac 38922744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 371
Target Start/End: Complemental strand, 41755545 - 41755498
Alignment:
Q  324 tttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    |||| ||||||||||||||| ||| ||||||||||||||||| |||||    
T  41755545 tttctcatggtgggaaaaaactctcctttcccaaattaaatgacacct 41755498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 17227014 - 17226968
Alignment:
Q  324 tttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||| || ||| ||||||||||||||||| ||||    
T  17227014 tttcccatggtgggaaagaaatctcctttcccaaattaaatgccacc 17226968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 320 - 370
Target Start/End: Original strand, 17227946 - 17227996
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||||  |||||||||||| |||||| ||||||||||||||||| ||||    
T  17227946 agactttttcatggtgggaaagaagtctcctttcccaaattaaatgccacc 17227996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 368
Target Start/End: Complemental strand, 32994973 - 32994927
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggca 368  Q
    ||||||||||| |||||||||| | | ||||||||||||||||||||    
T  32994973 actttcccatgatgggaaaaaaatgtgctttcccaaattaaatggca 32994927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 44687163 - 44687213
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||| ||||||||| ||| || ||| ||||||||||||||||||||||||    
T  44687163 acttttccatggtggaaaagaattctcctttcccaaattaaatggcacctt 44687213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 25329431 - 25329382
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||| ||||||| |||| | |||||| ||||||||||||||||    
T  25329431 actttcccatgatgggaaataagtttgctttcctaaattaaatggcacct 25329382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 32490195 - 32490244
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||| ||||||||||||| || ||| |||||||||||||||||| ||||    
T  32490195 acttttccatggtgggaaagaactctcctttcccaaattaaatggtacct 32490244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 359
Target Start/End: Complemental strand, 37104400 - 37104363
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaat 359  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  37104400 actttcccatggtggaaaaaaagtctcctttcccaaat 37104363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 6e-30; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 180 - 263
Target Start/End: Complemental strand, 25876712 - 25876629
Alignment:
Q  180 ttaatcaatcagttttgtgctgtactggagaaatggggaggtgcagtagtaagcttggaaacaaaattaaaataataaattgag 263  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25876712 ttaatcaatcagttttgtggtgtaatggggaaatggggaggtgcagtagtaagcttggaaacaacattaaaataataaattgag 25876629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 294 - 371
Target Start/End: Original strand, 7424534 - 7424611
Alignment:
Q  294 aaaactgacaagtgtccttggtaaagagactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  7424534 aaaaccgacaagtgtccttggtaaagagactttcccatggtggaaaaaaagtcttctttctcaaattaaattgcacct 7424611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 294 - 371
Target Start/End: Complemental strand, 25876597 - 25876520
Alignment:
Q  294 aaaactgacaagtgtccttggtaaagagactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25876597 aaaaccgacaagtatccttcgtaaagagactttcccatggtgggaaaaaaatcttctttcccaaattaaatggcacct 25876520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 180 - 263
Target Start/End: Original strand, 7424421 - 7424504
Alignment:
Q  180 ttaatcaatcagttttgtgctgtactggagaaatggggaggtgcagtagtaagcttggaaacaaaattaaaataataaattgag 263  Q
    ||||||||||||||||||| |||| ||  |||||||||||||||||||||||| ||||||| || |||||||||||||||||||    
T  7424421 ttaatcaatcagttttgtggtgtaatgcggaaatggggaggtgcagtagtaagtttggaaagaacattaaaataataaattgag 7424504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 34992264 - 34992313
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  34992264 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 34992313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 320 - 371
Target Start/End: Complemental strand, 61504 - 61453
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  61504 agactttcccatggtgggaaagaagtctcctttcccaaattaaatgccacct 61453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 320 - 370
Target Start/End: Complemental strand, 1365879 - 1365829
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  1365879 agactttcccatggtgggaaagaagtctcctttcccaaattaaatgccacc 1365829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 41859358 - 41859309
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  41859358 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 41859309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 27918047 - 27918095
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  27918047 actttcccatggtgggaaaaaagtctcatttcccaaattaaacggcacc 27918095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 30272956 - 30273006
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||||| |||||||||||| | ||||||||||||||| ||||||||    
T  30272956 actttcccatgatgggaaaaaagtttgctttcccaaattaaacggcacctt 30273006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 320 - 370
Target Start/End: Complemental strand, 39254837 - 39254787
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||||| ||||    
T  39254837 agactttcctatggtgggaaagaagtctcctttcccaaattaaatgccacc 39254787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 5034946 - 5034897
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||| ||| || ||| |||||||||||||||||||||||    
T  5034946 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacct 5034897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 36936418 - 36936466
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||| |||||||||||| | ||||||||||||||| ||||||    
T  36936418 actttcccatgatgggaaaaaagtttgctttcccaaattaaacggcacc 36936466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 36936697 - 36936745
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||| |||||||||||| | ||||||||||||||| ||||||    
T  36936697 actttcccatgatgggaaaaaagtttgctttcccaaattaaacggcacc 36936745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 42345214 - 42345166
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||| ||||||| |||| | ||||||||||||||||||||||    
T  42345214 actttcccatgatgggaaagaagtttactttcccaaattaaatggcacc 42345166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 369
Target Start/End: Complemental strand, 28090705 - 28090658
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcac 369  Q
    ||||||||||| ||||||| |||| | |||||||||||||||||||||    
T  28090705 actttcccatgatgggaaagaagtttactttcccaaattaaatggcac 28090658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 320 - 371
Target Start/End: Original strand, 39255750 - 39255801
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||||| ||||||  |||||||| ||||||| |||||    
T  39255750 agactttcccatggtgggaaagaagtctcatttcccaagttaaatgccacct 39255801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 320 - 371
Target Start/End: Complemental strand, 44751658 - 44751607
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||| ||||||| |||||| ||||||||| ||||||| |||||    
T  44751658 agactttcccatgatgggaaagaagtctcctttcccaagttaaatgccacct 44751607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 320 - 370
Target Start/End: Complemental strand, 216443 - 216393
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||| |||| |||||||| |||| |||||||||| |||||||||||||    
T  216443 agacttttccatagtgggaaagaagtattctttcccagattaaatggcacc 216393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 320 - 370
Target Start/End: Complemental strand, 693003 - 692953
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||| |||| |||||||| |||| |||||||||| |||||||||||||    
T  693003 agacttttccatagtgggaaagaagtattctttcccagattaaatggcacc 692953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 320 - 370
Target Start/End: Complemental strand, 697212 - 697162
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||| |||| |||||||| |||| |||||||||| |||||||||||||    
T  697212 agacttttccatagtgggaaagaagtattctttcccagattaaatggcacc 697162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 320 - 370
Target Start/End: Complemental strand, 730066 - 730016
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||| |||| |||||||| |||| |||||||||| |||||||||||||    
T  730066 agacttttccatagtgggaaagaagtattctttcccagattaaatggcacc 730016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 320 - 370
Target Start/End: Complemental strand, 853961 - 853911
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||| |||| |||||||| |||| |||||||||| |||||||||||||    
T  853961 agacttttccatagtgggaaagaagtattctttcccagattaaatggcacc 853911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 62239 - 62288
Alignment:
Q  321 gactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||||| ||||||||||| |||||| ||||| ||||||||||| ||||    
T  62239 gactttcctatggtgggaaagaagtctcctttctcaaattaaatgtcacc 62288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Complemental strand, 4364087 - 4364046
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaa 363  Q
    ||||||||||| |||||||||||| | |||||||||||||||    
T  4364087 actttcccatgatgggaaaaaagtttcctttcccaaattaaa 4364046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Complemental strand, 37639759 - 37639718
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaa 363  Q
    ||||||||||||||||||| || ||| |||||||||||||||    
T  37639759 actttcccatggtgggaaagaactctcctttcccaaattaaa 37639718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 42346560 - 42346609
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||| ||| ||| |||| | |||||||||||||||||||||||    
T  42346560 actttcccatgatggaaaagaagtttgctttcccaaattaaatggcacct 42346609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 6e-30; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 294 - 373
Target Start/End: Complemental strand, 42544564 - 42544485
Alignment:
Q  294 aaaactgacaagtgtccttggtaaagagactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcaccttt 373  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42544564 aaaaccgacaagtgtccttgataaagagacttttccatggtgggaaaaaagtcttctttcccaaattaaatggcaccttt 42544485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 42544678 - 42544596
Alignment:
Q  180 ttaatcaatcagttttgtgctgtactggagaaatggggaggtgcagtagtaagcttggaaacaaaattaaaataataaattga 262  Q
    |||||||||||||||| || |||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42544678 ttaatcaatcagttttatggtgtaatggggaaatggggaggtgcagtagtaagcttggaaacaacattaaaataataaattga 42544596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 322 - 374
Target Start/End: Complemental strand, 52757861 - 52757809
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcaccttta 374  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  52757861 actttcctatggagggaaaaaagtcttctttcccaaattaaatggcaccttta 52757809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 287 - 370
Target Start/End: Original strand, 23865282 - 23865365
Alignment:
Q  287 ccagtccaaaactgacaagtgtccttggtaaagagactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||| ||||||||| | ||||||| ||||||| |||| ||||||||||||||| |||||| ||||| ||||||||| ||||||    
T  23865282 ccagttcaaaactgataggtgtcctgggtaaagggactgtcccatggtgggaaacaagtctcctttcacaaattaaacggcacc 23865365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 322 - 365
Target Start/End: Complemental strand, 3847934 - 3847891
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatg 365  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  3847934 actttcccatggtgggaaaaaagtctcctttcccaaattaaatg 3847891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 320 - 371
Target Start/End: Complemental strand, 47198655 - 47198604
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  47198655 agactttcccatggtgggaaagaagtctcctttcccaaattaaatgtcacct 47198604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 372
Target Start/End: Complemental strand, 11417735 - 11417685
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||||    
T  11417735 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacctt 11417685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 29651332 - 29651382
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||||    
T  29651332 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacctt 29651382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 26611283 - 26611332
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    |||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  26611283 actttcccatggtgggaaaaaactctcctttcccaaattaaatgacacct 26611332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 322 - 365
Target Start/End: Original strand, 3848578 - 3848621
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatg 365  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  3848578 actttcccatggtgggaaagaagtctcctttcccaaattaaatg 3848621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 10425059 - 10425109
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||||||||||||| || ||| |||||| |||||||||||||||||    
T  10425059 actttcccatggtgggaaagaactctcctttcctaaattaaatggcacctt 10425109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 372
Target Start/End: Complemental strand, 48013365 - 48013315
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||||| ||||||| |||| | ||||||||||||||||||||||||    
T  48013365 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacctt 48013315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 28684232 - 28684281
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||| ||||| |||||||||||| ||||||||||||||||| |||||    
T  28684232 actttcctatggtaggaaaaaagtctcctttcccaaattaaatgtcacct 28684281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 30478357 - 30478308
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||| ||||||| |||| | |||||||||||||||||||||||    
T  30478357 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 30478308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 31836460 - 31836509
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||| || ||| ||||| |||||||||||||||||    
T  31836460 actttcccatggtgggaaagaactctcctttctcaaattaaatggcacct 31836509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 47377598 - 47377647
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||| || ||  |||||||||||||||||||||||    
T  47377598 actttcccatggtgggaaacaactcccctttcccaaattaaatggcacct 47377647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 10424171 - 10424123
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||| ||||||||||| || ||| ||||||||||||||||||||||    
T  10424171 actttcctatggtgggaaagaactctcctttcccaaattaaatggcacc 10424123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 11417937 - 11417985
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||| || ||| ||||||||||||||||| ||||    
T  11417937 actttcccatggtgggaaagaactctcctttcccaaattaaatgacacc 11417985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 21165495 - 21165447
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||| |||||||||||| || | ||||||||||||||||||||||||    
T  21165495 actttctcatggtgggaaagaactattctttcccaaattaaatggcacc 21165447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 25371545 - 25371593
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||| |||||||||||| |||||| ||||||||||||||||| ||||    
T  25371545 actttctcatggtgggaaagaagtctcctttcccaaattaaatgtcacc 25371593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 36865717 - 36865765
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||| || ||| ||||||||||||||||| ||||    
T  36865717 actttcccatggtgggaaagaactctcctttcccaaattaaatgtcacc 36865765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 37275136 - 37275088
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||| |||||||||||| |||||| ||||||||||||||| ||||||    
T  37275136 actttctcatggtgggaaagaagtctcctttcccaaattaaacggcacc 37275088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 38694954 - 38695002
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||| |||||||||||| || ||| ||||||||||||||||||||||    
T  38694954 actttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 38695002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 39523271 - 39523319
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||| ||| || ||| ||||||||||||||||||||||    
T  39523271 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 39523319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 42545563 - 42545611
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||| ||| |||||||||||| | ||||||||||||||||||||||    
T  42545563 actttcctatgatgggaaaaaagtgtactttcccaaattaaatggcacc 42545611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 45235960 - 45236008
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||| || ||| |||| |||||||||||||||||    
T  45235960 actttcccatggtgggaaagaactctccttttccaaattaaatggcacc 45236008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 46765169 - 46765217
Alignment:
Q  323 ctttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||||| |  |||||||||||||||||| |||||    
T  46765169 ctttcccatggtgggaaaaaactagtctttcccaaattaaatgccacct 46765217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 55159230 - 55159186
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaat 364  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||||    
T  55159230 agactttcccatggtaggaaagaagtctcctttcccaaattaaat 55159186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 320 - 371
Target Start/End: Original strand, 55160065 - 55160115
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||| |||||    
T  55160065 agactttcccatggtgagaaaaa-gtctcctttcccaaattaaatgccacct 55160115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 21166375 - 21166425
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||||| ||||||| || ||| ||||| ||||||||||||||||||    
T  21166375 actttcccatgatgggaaagaactctcctttctcaaattaaatggcacctt 21166425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 321 - 371
Target Start/End: Original strand, 47199394 - 47199444
Alignment:
Q  321 gactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    |||||||| ||||||||||| ||||||  |||||||||||||||| |||||    
T  47199394 gactttcctatggtgggaaagaagtctcttttcccaaattaaatgccacct 47199444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Original strand, 25655639 - 25655680
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaa 363  Q
    |||||||||||||||||||||| |  ||||||||||||||||    
T  25655639 actttcccatggtgggaaaaaactagtctttcccaaattaaa 25655680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 3e-25; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 24549639 - 24549714
Alignment:
Q  17 agaagaagagttgatgttctttgttggaaactgagtattgtacgcgagaagaagaacagttgatgttaagcttttt 92  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  24549639 agaagaagagttgatgttctttgttcgaaactgagtagggtacgcgagaagaagaatagttgatgttaagcttttt 24549714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 3543063 - 3543111
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  3543063 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 3543111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 368
Target Start/End: Complemental strand, 3542862 - 3542816
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggca 368  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  3542862 actttcccatggtgggaaaaaactctcctttcccaaattaaatggca 3542816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 7159341 - 7159390
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||| |||||||||||| | |||||||||||||||||||||||    
T  7159341 actttcccatgatgggaaaaaagtttgctttcccaaattaaatggcacct 7159390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 7193386 - 7193337
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  7193386 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 7193337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 33480628 - 33480676
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  33480628 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 33480676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 368
Target Start/End: Complemental strand, 33479744 - 33479698
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggca 368  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||    
T  33479744 actttcccatggtgggaaataactctcctttcccaaattaaatggca 33479698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 14337557 - 14337606
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||| ||||||| |||| | |||||||||||||||||||||||    
T  14337557 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 14337606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 293 - 370
Target Start/End: Original strand, 33078285 - 33078362
Alignment:
Q  293 caaaactgacaagtgtccttggtaaagagactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||| ||||||| ||||||| |||| |||||||||   ||||||||||  ||| |||||||||| ||||||    
T  33078285 caaaactgacaggtgtcctgggtaaagggactgtcccatggtaaaaaaaaagtctcattttccaaattaaacggcacc 33078362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 7531877 - 7531829
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||| ||||    
T  7531877 actttcccatggtaggaaagaagtctcctttcccaaattaaatgccacc 7531829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 15083318 - 15083366
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||| |||||||||||| || ||| ||||||||||||||||||||||    
T  15083318 actttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 15083366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 22579983 - 22579935
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||| ||| || ||| ||||||||||||||||||||||    
T  22579983 actttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 22579935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 366
Target Start/End: Original strand, 22582479 - 22582523
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatgg 366  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||    
T  22582479 actttcccatggtgggaaagaactctcctttcccaaattaaatgg 22582523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 366
Target Start/End: Original strand, 22587310 - 22587354
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatgg 366  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||    
T  22587310 actttcccatggtgggaaagaactctcctttcccaaattaaatgg 22587354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 373
Target Start/End: Original strand, 7532440 - 7532491
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcaccttt 373  Q
    ||||||||||||||  ||| |||||| ||||||||||||||||| |||||||    
T  7532440 actttcccatggtgaaaaagaagtctcctttcccaaattaaatgccaccttt 7532491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 372
Target Start/End: Complemental strand, 7158483 - 7158433
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||||| ||||||  |||| | ||||||||||||||||||||||||    
T  7158483 actttcccatgatgggaatgaagtttgctttcccaaattaaatggcacctt 7158433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 320 - 370
Target Start/End: Original strand, 9574569 - 9574619
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||| ||||||||||| |||||| ||||||||| ||||||| ||||    
T  9574569 agactttcctatggtgggaaagaagtctcctttcccaagttaaatgccacc 9574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 323 - 365
Target Start/End: Complemental strand, 10607448 - 10607406
Alignment:
Q  323 ctttcccatggtgggaaaaaagtcttctttcccaaattaaatg 365  Q
    ||||||||||||||||||||| |  ||||||||||||||||||    
T  10607448 ctttcccatggtgggaaaaaactagtctttcccaaattaaatg 10607406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 24551481 - 24551541
Alignment:
Q  202 tactggagaaatggggaggtgcagtagtaagcttggaaacaaaattaaaataataaattgag 263  Q
    ||||| ||||||| |||| |||| |||||||||| |||| || |||||||||||||||||||    
T  24551481 tactgaagaaatgaggagatgcaatagtaagctt-gaaaaaacattaaaataataaattgag 24551541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Original strand, 33018416 - 33018457
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaa 363  Q
    ||||||||||||||||||| || ||| |||||||||||||||    
T  33018416 actttcccatggtgggaaagaactctcctttcccaaattaaa 33018457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 322 - 374
Target Start/End: Original strand, 37864307 - 37864359
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcaccttta 374  Q
    ||||||||||||||||||| || |||| |||||||||||||||||||||||||    
T  37864307 actttcccatggtgggaaagaactcttatttcccaaattaaatggcaccttta 37864359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 37468958 - 37468909
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  37468958 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 37468909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 38778902 - 38778853
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  38778902 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 38778853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 41194561 - 41194512
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  41194561 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 41194512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 668227 - 668179
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  668227 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 668179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 17145670 - 17145622
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  17145670 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 17145622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 37469005 - 37469053
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  37469005 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 37469053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 38779563 - 38779611
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  38779563 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 38779611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 4261596 - 4261646
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||||||||||||| || ||| |||||| |||||||||||||||||    
T  4261596 actttcccatggtgggaaagaactctcctttcctaaattaaatggcacctt 4261646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 368
Target Start/End: Original strand, 7677809 - 7677855
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggca 368  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||    
T  7677809 actttcccatggtgggaaagaactctcctttcccaaattaaatggca 7677855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 669103 - 669151
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||| |||||||||||||| |||  |||||||||||||||||||||    
T  669103 actttcctatggtgggaaaaaactctcatttcccaaattaaatggcacc 669151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 373
Target Start/End: Complemental strand, 38071946 - 38071895
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcaccttt 373  Q
    ||||||||||| ||||||| || ||| |||||| ||||||||||||||||||    
T  38071946 actttcccatgatgggaaagaactctcctttcctaaattaaatggcaccttt 38071895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 29315311 - 29315361
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||||| |||||||||| |  ||||||||||||||||| |||||||    
T  29315311 actttcccatgatgggaaaaaactagtctttcccaaattaaattgcacctt 29315361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 41224843 - 41224893
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||||||||||||||||     ||||||||||||||||||||||||    
T  41224843 actttcccatggtgggaaaaaataagcctttcccaaattaaatggcacctt 41224893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 363
Target Start/End: Complemental strand, 20890247 - 20890206
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaa 363  Q
    |||||||||||||||||||||| | | |||||||||||||||    
T  20890247 actttcccatggtgggaaaaaactgtcctttcccaaattaaa 20890206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 29006395 - 29006346
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||    
T  29006395 actttcccatggtgggaaaaaacaagcctttcccaaattaaatggcacct 29006346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 47331954 - 47332003
Alignment:
Q  323 ctttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||||||||||||||| |   ||||||||||||||||| ||||||    
T  47331954 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgtcacctt 47332003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 49610754 - 49610706
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  49610754 actttcccatggagggaaaaaagtcttctttcccaaataaaatggcacc 49610706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 372
Target Start/End: Complemental strand, 1012595 - 1012545
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  1012595 actttcccatggtgggaaaaaaatctcctttcccaaattaaacggcacctt 1012545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 51974485 - 51974436
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  51974485 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 51974436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 51987875 - 51987826
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  51987875 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacct 51987826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 16270255 - 16270207
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  16270255 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 16270207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 23440865 - 23440913
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  23440865 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 23440913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 35616773 - 35616825
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||    
T  35616773 agactttcccatggtgggaaagaagtctcctttcccaagttaaatgccacctt 35616825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 43737777 - 43737729
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  43737777 actttcccatggtgggaaataactctactttcccaaattaaatggcacc 43737729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 372
Target Start/End: Complemental strand, 45064734 - 45064684
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||||| |||||||||| |  |||||||||||||||||||||||||    
T  45064734 actttcccatgatgggaaaaaactaatctttcccaaattaaatggcacctt 45064684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 43737978 - 43738027
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||| ||||||| || ||| |||||||||||||||||||||||    
T  43737978 actttcccatgatgggaaagaactctcctttcccaaattaaatggcacct 43738027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 48972445 - 48972494
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||| ||||||||||||| || ||| |||||||||||||||||||||||    
T  48972445 acttttccatggtgggaaagaactctcctttcccaaattaaatggcacct 48972494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 193898 - 193850
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||| |||||||||||| || ||| ||||||||||||||||||||||    
T  193898 actttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 193850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 194701 - 194749
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||| ||||||| |||| | ||||||||||||||||||||||    
T  194701 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 194749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 8560887 - 8560839
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||| ||||    
T  8560887 actttcccatgatgggaaagaagtctcctttcccaaattaaatgtcacc 8560839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 9948043 - 9947995
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||| ||||||||||||| || | ||||||||||||||||||||||||    
T  9948043 acttttccatggtgggaaagaacttttctttcccaaattaaatggcacc 9947995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 9948887 - 9948935
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||| || ||| |||||| |||||||||||||||    
T  9948887 actttcccatggtgggaaagaactctcctttcctaaattaaatggcacc 9948935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 48870751 - 48870795
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaat 364  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||    
T  48870751 agactttcccatggtgggaaaaaagtctcatttcccaagttaaat 48870795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 51988464 - 51988512
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  51988464 actttcccatggtggaaaagaagtctcctttcccaaattaaatgccacc 51988512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 320 - 370
Target Start/End: Complemental strand, 37874114 - 37874064
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||||| ||||||  |||||||| ||||||| ||||    
T  37874114 agactttcccatggtgggaaagaagtctcatttcccaagttaaatgtcacc 37874064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 368
Target Start/End: Original strand, 38931247 - 38931293
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggca 368  Q
    ||||||||||||| | ||| || ||||||||||||||||||||||||    
T  38931247 actttcccatggtagaaaagaactcttctttcccaaattaaatggca 38931293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 8561737 - 8561786
Alignment:
Q  323 ctttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    |||||||||| |||||||||| |  |||||||||||||||||| ||||||    
T  8561737 ctttcccatgatgggaaaaaactagtctttcccaaattaaatgtcacctt 8561786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.000000000001; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 364
Target Start/End: Complemental strand, 4607512 - 4607470
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaat 364  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  4607512 actttcccatggtgggaaaaaagtctactttcccaaattaaat 4607470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 8204168 - 8204119
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  8204168 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 8204119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 12190158 - 12190207
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||    
T  12190158 actttcccatggtgggaaaaaactctcttttcccaaattaaatggcacct 12190207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 15184017 - 15184065
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  15184017 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 15184065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 320 - 371
Target Start/End: Complemental strand, 13654983 - 13654932
Alignment:
Q  320 agactttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||||| |||||    
T  13654983 agactttcctatggtgggaaagaagtctcctttcccaaattaaatgtcacct 13654932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 323 - 370
Target Start/End: Complemental strand, 39950451 - 39950404
Alignment:
Q  323 ctttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||||||||||||||| || ||| ||||||||||||||||||||||    
T  39950451 ctttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 39950404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 33002816 - 33002866
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||||||||||||| || ||| ||||||||||||||||| ||||||    
T  33002816 actttcccatggtgggaaagaactctcctttcccaaattaaatgacacctt 33002866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 8226690 - 8226641
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||| |||||| ||||||||| ||||||||| |||||||||||||||||    
T  8226690 acttttccatggagggaaaaaattcttctttctcaaattaaatggcacct 8226641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 36626630 - 36626679
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||| || |||  ||||||||||||||||||||||    
T  36626630 actttcccatggtgggaaagaactctcatttcccaaattaaatggcacct 36626679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 686464 - 686417
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  686464 actttcccatggtgggaaaaac-tctcctttcccaaattaaatggcacc 686417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 16971033 - 16971081
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||| |||||||||| |  |||||||||||||||||||||||    
T  16971033 actttcccatgatgggaaaaaactagtctttcccaaattaaatggcacc 16971081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 26688214 - 26688166
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||| ||||||| |||| | ||||||||||||||||||||||    
T  26688214 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 26688166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 26957945 - 26957897
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||| ||||||| |||| | ||||||||||||||||||||||    
T  26957945 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 26957897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 31148445 - 31148493
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||| |||||||||||| | ||||||||||||||| ||||||    
T  31148445 actttcccatgatgggaaaaaagtgtgctttcccaaattaaacggcacc 31148493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 8040444 - 8040494
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacctt 372  Q
    ||||||||| ||||||||| || | | ||||||||||||||||||||||||    
T  8040444 actttcccacggtgggaaagaaatttcctttcccaaattaaatggcacctt 8040494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 2458354 - 2458403
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||| ||||||||| ||||||||||  |||||||||||||| |||||||    
T  2458354 acttttccatggtggaaaaaaagtctcatttcccaaattaaacggcacct 2458403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 13404703 - 13404752
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    |||||||||||||||||||||||  | | ||||||||||||||| |||||    
T  13404703 actttcccatggtgggaaaaaagagtccgttcccaaattaaatgccacct 13404752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 33001980 - 33001931
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||| ||||||||||||| || ||| |||||||||||||||||| ||||    
T  33001980 acttttccatggtgggaaagaactctcctttcccaaattaaatggtacct 33001931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 39167442 - 39167483
Alignment:
Q  324 tttcccatggtgggaaaaaagtcttctttcccaaattaaatg 365  Q
    ||||||||| ||||||| |||||| |||||||||||||||||    
T  39167442 tttcccatgatgggaaagaagtctcctttcccaaattaaatg 39167483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 160 - 209
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 371  Q
    ||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  160 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 370
Target Start/End: Original strand, 27575 - 27623
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||||    
T  27575 actttcccatggtgggaaaaaactctccttttccaaattaaatggcacc 27623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 27269 - 27221
Alignment:
Q  322 actttcccatggtgggaaaaaagtcttctttcccaaattaaatggcacc 370  Q
    ||||||||||| ||||||| || ||| ||||||||||||||||||||||    
T  27269 actttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 27221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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