View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7750_low_25 (Length: 424)
Name: NF7750_low_25
Description: NF7750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7750_low_25 |
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Alignment Details
Target: chr1 (Bit Score: 374; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 13 - 405
Target Start/End: Original strand, 37957131 - 37957524
Alignment:
| Q |
13 |
aagaacacaaaagttaatttgtacaatggagatacttaaagatttagtttgtaccctttttatacggggtacttccaaacatgagtggttctaattattc |
112 |
Q |
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| T |
37957131 |
aagaacacaaaggttaatttgtacaatggagatacttaaagatttagtttgtaccctttttatacggggtacttccaaacatgagtggttctaattattc |
37957230 |
T |
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| Q |
113 |
caacaacaagaatgaaattgctactttttcatatgtcatactcatatagttgttaccaaaaaa-tacacatgtcatactcatatctagaaatatttgccc |
211 |
Q |
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| T |
37957231 |
caacaacaagaatgaaattgctactttttcatatgtcatactcatatagttgttaccaaaaaaatacatatgtcatactcatatctagaaatatttgccc |
37957330 |
T |
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| Q |
212 |
tttttagtaaatagaaattatagaatagtagctaaaataatgttactccaacacaattggattggatctcaaagggtgcaaattaaagcaaagacccaac |
311 |
Q |
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| T |
37957331 |
tttttagtaaatagaaattatagaatagtagctaaaataatgttactccaacacaattggattggatctcaaagggtgcaaattaaagcaaagacctaac |
37957430 |
T |
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| Q |
312 |
tagagaattatgttcaaggattttaccttgaagctagtcattagtctttaaacgtggttaattaatctggtgcccttcaattaattatctctac |
405 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37957431 |
tagagaattatgttcaaggattttaccttgaagctagtcattagtctttaaacgtggttaattaatctggtgcccttcaattaattatctctac |
37957524 |
T |
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