View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7750_low_83 (Length: 227)
Name: NF7750_low_83
Description: NF7750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7750_low_83 |
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Alignment Details
Target: chr8 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 32554128 - 32554032
Alignment:
| Q |
28 |
ttataagttcgaattcgtctcgtttaaatttcacgaatagaatgttcgactcgttgaattttggattgtttattcaaatcatataattcaaaagtca |
124 |
Q |
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| T |
32554128 |
ttataagtttgaattcgtctcgtttaaatttcacgaatagtatgttcgactcgttgaattttggattgtttattcaaatcatataattcaaaagtca |
32554032 |
T |
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Target: chr8; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 32552280 - 32552204
Alignment:
| Q |
137 |
gaaaggtcaatttatagatctttgacataacaagttcctcaccaacacaacattttaagcaaacacacaacaatatt |
213 |
Q |
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| T |
32552280 |
gaaaggtcaatttatagatctttgacataacaagttcctcaccaacacaacattttaagcaaacacacaacaatatt |
32552204 |
T |
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