View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7751_low_1 (Length: 649)

Name: NF7751_low_1
Description: NF7751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7751_low_1
NF7751_low_1
[»] scaffold0282 (1 HSPs)
scaffold0282 (5-266)||(19809-20070)
[»] scaffold0108 (2 HSPs)
scaffold0108 (287-506)||(9000-9237)
scaffold0108 (576-634)||(9307-9365)
[»] chr5 (9 HSPs)
chr5 (8-248)||(17363182-17363422)
chr5 (8-266)||(24193201-24193458)
chr5 (94-266)||(10177573-10177745)
chr5 (342-425)||(10176984-10177068)
chr5 (201-273)||(22459101-22459173)
chr5 (584-622)||(31479429-31479467)
chr5 (300-397)||(432112-432209)
chr5 (181-266)||(19317303-19317387)
chr5 (293-378)||(23982035-23982120)
[»] scaffold0024 (1 HSPs)
scaffold0024 (5-221)||(100484-100700)
[»] chr2 (13 HSPs)
chr2 (88-264)||(21653472-21653648)
chr2 (84-249)||(17740638-17740801)
chr2 (288-424)||(34897211-34897348)
chr2 (7-71)||(17740017-17740081)
chr2 (5-140)||(23153907-23154042)
chr2 (5-140)||(23565164-23565299)
chr2 (5-124)||(24301955-24302074)
chr2 (293-410)||(33127684-33127801)
chr2 (21-138)||(34135356-34135473)
chr2 (590-623)||(34896993-34897026)
chr2 (16-67)||(34897852-34897903)
chr2 (420-488)||(7321251-7321319)
chr2 (7-51)||(27402716-27402760)
[»] chr6 (14 HSPs)
chr6 (43-266)||(20109907-20110131)
chr6 (8-266)||(23295101-23295361)
chr6 (86-239)||(14353384-14353537)
chr6 (112-264)||(23298787-23298939)
chr6 (5-201)||(12465437-12465635)
chr6 (12-242)||(12486768-12487000)
chr6 (10-107)||(9520705-9520802)
chr6 (44-238)||(14985488-14985682)
chr6 (5-67)||(23089887-23089949)
chr6 (153-258)||(19977852-19977957)
chr6 (5-71)||(14797361-14797427)
chr6 (355-488)||(15938213-15938356)
chr6 (5-46)||(17913374-17913415)
chr6 (5-44)||(19978073-19978112)
[»] chr1 (2 HSPs)
chr1 (6-258)||(9167083-9167338)
chr1 (86-266)||(20407186-20407370)
[»] scaffold0111 (1 HSPs)
scaffold0111 (5-211)||(31147-31354)
[»] chr8 (12 HSPs)
chr8 (5-211)||(17508578-17508785)
chr8 (107-242)||(21686904-21687039)
chr8 (107-242)||(21691228-21691363)
chr8 (283-400)||(18828051-18828169)
chr8 (183-258)||(12517567-12517641)
chr8 (184-268)||(24401391-24401475)
chr8 (21-59)||(21684779-21684817)
chr8 (21-59)||(21689128-21689166)
chr8 (13-67)||(25262297-25262351)
chr8 (184-266)||(25262469-25262551)
chr8 (584-616)||(18828372-18828404)
chr8 (195-227)||(21695380-21695412)
[»] chr7 (12 HSPs)
chr7 (3-211)||(17162089-17162298)
chr7 (291-406)||(3170712-3170827)
chr7 (420-506)||(3170594-3170680)
chr7 (5-71)||(20147623-20147689)
chr7 (145-228)||(3171288-3171371)
chr7 (5-63)||(6461080-6461138)
chr7 (5-140)||(13488261-13488396)
chr7 (288-383)||(15009847-15009942)
chr7 (1-51)||(15010193-15010243)
chr7 (584-629)||(3170470-3170515)
chr7 (10-67)||(16093869-16093926)
chr7 (12-53)||(16196112-16196153)
[»] chr4 (11 HSPs)
chr4 (5-258)||(12451554-12451806)
chr4 (114-266)||(18173822-18173974)
chr4 (145-266)||(16570777-16570898)
chr4 (126-266)||(17959003-17959143)
chr4 (5-140)||(9198053-9198188)
chr4 (5-140)||(9269419-9269554)
chr4 (5-71)||(18420025-18420091)
chr4 (5-140)||(10115462-10115597)
chr4 (343-428)||(28800592-28800678)
chr4 (5-138)||(9251632-9251765)
chr4 (5-71)||(9220830-9220896)
[»] scaffold0007 (2 HSPs)
scaffold0007 (118-266)||(208452-208600)
scaffold0007 (43-266)||(211559-211782)
[»] scaffold2017 (1 HSPs)
scaffold2017 (113-266)||(748-901)
[»] scaffold1114 (1 HSPs)
scaffold1114 (115-243)||(380-508)
[»] chr3 (10 HSPs)
chr3 (170-258)||(12805128-12805216)
chr3 (5-63)||(9637234-9637292)
chr3 (291-416)||(15045630-15045756)
chr3 (181-266)||(5346657-5346741)
chr3 (5-56)||(17385827-17385878)
chr3 (13-67)||(11833522-11833576)
chr3 (12-53)||(2547600-2547641)
chr3 (7-68)||(12794338-12794399)
chr3 (420-488)||(15550335-15550403)
chr3 (420-488)||(37916645-37916713)
[»] scaffold0417 (1 HSPs)
scaffold0417 (5-211)||(2640-2846)
[»] scaffold0299 (1 HSPs)
scaffold0299 (114-220)||(9110-9216)
[»] scaffold0018 (2 HSPs)
scaffold0018 (170-258)||(53718-53806)
scaffold0018 (170-258)||(57670-57758)
[»] scaffold0023 (1 HSPs)
scaffold0023 (293-410)||(61724-61841)
[»] scaffold0205 (1 HSPs)
scaffold0205 (420-488)||(1421-1489)
[»] scaffold0959 (1 HSPs)
scaffold0959 (5-140)||(759-894)
[»] scaffold0126 (1 HSPs)
scaffold0126 (13-71)||(16406-16464)
[»] scaffold0118 (1 HSPs)
scaffold0118 (194-266)||(16354-16426)
[»] scaffold0193 (1 HSPs)
scaffold0193 (581-619)||(18704-18742)
[»] scaffold0135 (1 HSPs)
scaffold0135 (5-71)||(31481-31547)


Alignment Details
Target: scaffold0282 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 5 - 266
Target Start/End: Complemental strand, 20070 - 19809
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  20070 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcataagcacgaagctaattgcaagttatccggtc 19971  T
Q  105 atgaaaacacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaacca 204  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19970 atgaaatcacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaacca 19871  T
Q  205 agcatatacactactcatatatgaccacaatagcatatgcatataagcatcatatgccaatt 266  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  19870 agcatatacactactcatatatgatcacactagcatatgcatataagcatcatatgccaatt 19809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 143; Significance: 9e-75; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 287 - 506
Target Start/End: Original strand, 9000 - 9237
Alignment:
Q  287 tgcataaaattccaaccgttaatcagatttcgattatgttttcgtctatgcgtttcttacacttaatcctatcacattctacagaaaattcaagtttctc 386  Q
    |||||||||||||||||||||||| ||||||||||  ||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  9000 tgcataaaattccaaccgttaatctgatttcgattccgttttcgcctatgcgttccttgcacttaatcctatcacattctacaaaaaattcaagtttctc 9099  T
Q  387 ccatcccaaaataacttactcaaagtcactcat------------------aatcacttaaactaacttttcatacaaaactcaagtttcttcccaaaac 468  Q
    |||||||||||||||||||||||||||||||||                  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9100 ccatcccaaaataacttactcaaagtcactcataatcacttatttttccaaaatcacttaaactaacttttcatacaaaactcaagtttcttcccaaaac 9199  T
Q  469 atttcagaatcaaatcttatgattcaaaactgaagttc 506  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  9200 atttcacaatcaaatcttatgatccaaaactgaagttc 9237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 576 - 634
Target Start/End: Original strand, 9307 - 9365
Alignment:
Q  576 catgacccttttctccaaaactcattaaaacaacaacaacttaatcacaacacacatat 634  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9307 catggcccttttctccaaaactcattaaaacaacaacaacttaatcacaacacacatat 9365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 8e-69; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 17363182 - 17363422
Alignment:
Q  8 tcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtcatg 107  Q
    ||||| |||||||||||||||||||| | ||||| ||||||||||||||||||||||||| |||||| |||| |||| |||||||||||||| |||||||    
T  17363182 tcatggcattcaacatattaaacacctactcatcattgattcattcttattctatcatattatcttatgcacaaagccaattgcaagttatccggtcatg 17363281  T
Q  108 aaaacacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaagc 207  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| ||||||||| | | |||||||||| |||||| |  ||||    
T  17363282 aaaccacattttaacaaagttcgtctattttcaaaacttttatcatttcctacgtaattcaccaaaacaaagcatacatgttcaaacacctcgaaaaagc 17363381  T
Q  208 atatacactactcatatatgaccacaatagcatatgcatat 248  Q
    ||| |||||| ||| |||||| |||| |||||||| |||||    
T  17363382 atagacactaatcacatatgatcacagtagcatatacatat 17363422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 8 - 266
Target Start/End: Original strand, 24193201 - 24193458
Alignment:
Q  8 tcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtcatg 107  Q
    |||||||||| | ||||||||||| |||||  || |||||||||||||||| || |||||||||||||||| ||||  |||||||||||||| |||||||    
T  24193201 tcatgacattaatcatattaaacatccaattctcattgattcattcttattataacatatcatcttaagcatgaagtcaattgcaagttatccggtcatg 24193300  T
Q  108 aaaacacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaagc 207  Q
    ||| ||||||||||||| |||||||||||| || ||||||   || ||||||||||||||  ||||| ||||||||||||| | | ||||||||||||||    
T  24193301 aaatcacattttaacaaagttcgtctatttccacaactttctaca-tttctaagtaattcaacaaaataaggtaaacatgtcctaacacctcaaccaagc 24193399  T
Q  208 atatacactactcatatatgaccacaatagcatatgcatataagcatcatatgccaatt 266  Q
    |||||||||||||| ||||||  | | ||||| ||||||||| |||| ||| |||||||    
T  24193400 atatacactactcacatatgattagagtagcacatgcatataggcattataggccaatt 24193458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 94 - 266
Target Start/End: Complemental strand, 10177745 - 10177573
Alignment:
Q  94 gttatctggtcatgaaaacacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaac 193  Q
    |||||| ||| |||||| ||||||||||||| |||||||||||||||  |||||   | ||||||||||| |||  |||||||||||||||||  ||||     
T  10177745 gttatccggtaatgaaaccacattttaacaacgttcgtctattttcaccactttctacgttttctaagtatttcaacaaaacaaggtaaacataatcaaa 10177646  T
Q  194 cacctcaaccaagcatatacactactcatatatgaccacaatagcatatgcatataagcatcatatgccaatt 266  Q
    || ||||||||||||||||||||||||| | |||| || | |||| |||||||||| |||||||| |||||||    
T  10177645 catctcaaccaagcatatacactactcacacatgatcatagtagcttatgcatataggcatcataggccaatt 10177573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 342 - 425
Target Start/End: Complemental strand, 10177068 - 10176984
Alignment:
Q  342 cttacacttaatcctatcacattcta-cagaaaattcaagtttctcccatcccaaaataacttactcaaagtcactcataatcac 425  Q
    ||||||||||   ||||||||||||| ||||||| |||||||||||||||||||||| |||| |||||||  | |||||||||||    
T  10177068 cttacacttagaactatcacattctatcagaaaaatcaagtttctcccatcccaaaacaactcactcaaaacctctcataatcac 10176984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 201 - 273
Target Start/End: Original strand, 22459101 - 22459173
Alignment:
Q  201 accaagcatatacactactcatatatgaccacaatagcatatgcatataagcatcatatgccaatttcaaaat 273  Q
    ||||||||||| ||||||||| ||| || |||||||||||||||||||| ||||| || ||||||| ||||||    
T  22459101 accaagcatatgcactactcacataagatcacaatagcatatgcatataggcatcttaggccaattccaaaat 22459173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 584 - 622
Target Start/End: Original strand, 31479429 - 31479467
Alignment:
Q  584 ttttctccaaaactcattaaaacaacaacaacttaatca 622  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  31479429 ttttcttcaaagctcattaaaacaacaacaacttaatca 31479467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 397
Target Start/End: Original strand, 432112 - 432209
Alignment:
Q  300 aaccgttaatcagatttcgattatgttttcgtctatgcgtttcttacacttaatcctatcacattctacagaaaattcaagtttctcccatcccaaaa 397  Q
    ||||||||||| || |||||||  ||||||||||| ||||| ||||||||||   |||||  |||| ||| |||||||| ||| |  |||||||||||    
T  432112 aaccgttaatccgacttcgattccgttttcgtctacgcgttccttacacttagctctatcttattccacaaaaaattcatgttccaaccatcccaaaa 432209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 266
Target Start/End: Complemental strand, 19317387 - 19317303
Alignment:
Q  181 aaacatgttcaaccacctcaaccaagcatatacactactcatatatgaccacaatagcatatgcatataagcatcatatgccaatt 266  Q
    ||||| ||||||| |||||||||||||| | | |||||||| | |||| || | ||| ||||||||||| |||||||| |||||||    
T  19317387 aaacaagttcaac-acctcaaccaagcacacatactactcacacatgagcatattagtatatgcatataggcatcataggccaatt 19317303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 23982120 - 23982035
Alignment:
Q  293 aaattccaaccgttaatcagatttcgattatgttttcgtctatgcgtttcttacacttaatcctatcacattctacagaaaattca 378  Q
    |||||| |||||||||||  |||||||||  ||||||||||| ||| | ||||||||||   |||||  |||| ||||||||||||    
T  23982120 aaattcaaaccgttaatccaatttcgattccgttttcgtctacgcgatccttacacttagctctatcttattccacagaaaattca 23982035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 117; Significance: 3e-59; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 100700 - 100484
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtc 104  Q
    ||||||||| ||||| ||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||   ||    
T  100700 acatcatgatattcatcatgttaaacacccaaccatcattgattcattcttattctatcatatcatcttaagcatgaagctaattacaagttatccaatc 100601  T
Q  105 atgaaaacacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaacca 204  Q
    |||||| ||| ||||||||| |||||||||||||||  |||||   || || |||||||||||  |||||||||||||| | |||||| |||||||||||    
T  100600 atgaaaccactttttaacaaagttcgtctattttcatcactttctacagttcctaagtaattcgacaaaacaaggtaaataagttcaaacacctcaacca 100501  T
Q  205 agcatatacactactca 221  Q
    |||||||||||||||||    
T  100500 agcatatacactactca 100484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 2e-54; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 88 - 264
Target Start/End: Original strand, 21653472 - 21653648
Alignment:
Q  88 ttgcaagttatctggtcatgaaaacacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatg 187  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||||||||||   ||||   |||||||||||||||||| ||||||||||||||||||    
T  21653472 ttgcaagttatccggtcatgaaaccacattttaacaacgttcgtctattttcaccgctttctacattttctaagtaattccacaaaacaaggtaaacatg 21653571  T
Q  188 ttcaaccacctcaaccaagcatatacactactcatatatgaccacaatagcatatgcatataagcatcatatgccaa 264  Q
     |||| |||  ||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||    
T  21653572 gtcaaacactccaaccaagcatatacactactcacatatgatcacagtagcatatgcatataagcatcatatgccaa 21653648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 84 - 249
Target Start/End: Original strand, 17740638 - 17740801
Alignment:
Q  84 ctaattgcaagttatctggtcatgaaaacacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaa 183  Q
    |||||| ||||| |||||||||||||| ||||||  ||| |  ||||||||||||||  ||||||  ||||||||||||||||   ||||||||| ||||    
T  17740638 ctaattacaagtcatctggtcatgaaaccacatt--aaccaaattcgtctattttcaccactttttacattttctaagtaatttgacaaaacaagttaaa 17740735  T
Q  184 catgttcaaccacctcaaccaagcatatacactactcatatatgaccacaatagcatatgcatata 249  Q
    ||||||||| ||||||||||||||| |||||||||||| |||| | |||| |||||||||||||||    
T  17740736 catgttcaaacacctcaaccaagcacatacactactcacatattatcacagtagcatatgcatata 17740801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 288 - 424
Target Start/End: Complemental strand, 34897348 - 34897211
Alignment:
Q  288 gcataaaattccaaccgttaatcagatttcgattatgttttcgtctatgcgtttcttacacttaatcctatcacattcta-cagaaaattcaagtttctc 386  Q
    ||||||||||| |||| |||||| ||||||||||  ||||||| ||||||||| ||||||||||| ||||||||||| || |  |||||||||||||| |    
T  34897348 gcataaaattcaaacctttaatccgatttcgattccgttttcgcctatgcgttccttacacttaaacctatcacattatatcttaaaattcaagtttcac 34897249  T
Q  387 ccatcccaaaataacttactcaaagtcactcataatca 424  Q
    ||||||||||| |  ||||||||| || ||||||||||    
T  34897248 ccatcccaaaacagattactcaaaatctctcataatca 34897211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 17740017 - 17740081
Alignment:
Q  7 atcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatc 71  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  17740017 atcatgacattcaacatattaaacactcaatcatcattgattcattcttattctatcatatcatc 17740081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 23154042 - 23153907
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtc 104  Q
    |||||||| |||||| ||||||||||||||||||||  ||||||||||||||||||||| ||| ||  | |  || |||| | |||||||||||| | ||    
T  23154042 acatcatggcattcatcatattaaacacccaatcataattgattcattcttattctatcctattattatgattacaaagccatttgcaagttatccgatc 23153943  T
Q  105 atgaaaacacattttaacaaggttcgtctattttca 140  Q
    || ||| | |||||| | || |||||||||||||||    
T  23153942 ataaaacctcattttgataaagttcgtctattttca 23153907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 23565299 - 23565164
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtc 104  Q
    |||||||| |||||| ||||||||||||||||||||  ||||||||||||||||||||| ||| ||  | |  || |||| | |||||||||||| | ||    
T  23565299 acatcatggcattcatcatattaaacacccaatcataattgattcattcttattctatcctattattatgattacaaagccatttgcaagttatccgatc 23565200  T
Q  105 atgaaaacacattttaacaaggttcgtctattttca 140  Q
    || ||| | |||||| | || |||||||||||||||    
T  23565199 ataaaacctcattttgataaagttcgtctattttca 23565164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 24301955 - 24302074
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtc 104  Q
    |||| |||||||||| || ||| |||| |||| || | | |||||||||||||| |||| |||||| | ||||| ||||||||||||||| |||| ||||    
T  24301955 acattatgacattcaccaaattcaacatccaagcaacatagattcattcttattatatcctatcatttcaagcatgaagctaattgcaagctatccggtc 24302054  T
Q  105 atgaaaacacattttaacaa 124  Q
    |  ||| |||||||||||||    
T  24302055 acaaaaccacattttaacaa 24302074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 293 - 410
Target Start/End: Original strand, 33127684 - 33127801
Alignment:
Q  293 aaattccaaccgttaatcagatttcgattatgttttcgtctatgcgtttcttacacttaatcctatcacattctacagaaaattcaagtttctcccatcc 392  Q
    |||||| ||||||||||| ||||| ||||  ||||||||||| ||||| |||||||||||  |||||  |||| |||||||||||| ||| |  ||||||    
T  33127684 aaattcaaaccgttaatccgattttgatttcgttttcgtctacgcgttccttacacttaactctatcttattccacagaaaattcatgttccaaccatcc 33127783  T
Q  393 caaaataacttactcaaa 410  Q
    ||||| || |||| ||||    
T  33127784 caaaacaaattacccaaa 33127801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 34135473 - 34135356
Alignment:
Q  21 catattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtcatgaaaacacatttta 120  Q
    ||||||||||||||| || |  ||||||||| |||| | ||| |||||||| | | ||  |||| |||||||||||||   ||||||||| |||||||||    
T  34135473 catattaaacacccagtccttattgattcatccttagtttattatatcatcatgaacataaagccaattgcaagttattctgtcatgaaaccacatttta 34135374  T
Q  121 acaaggttcgtctatttt 138  Q
    || | |||||||||||||    
T  34135373 actaagttcgtctatttt 34135356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 590 - 623
Target Start/End: Complemental strand, 34897026 - 34896993
Alignment:
Q  590 ccaaaactcattaaaacaacaacaacttaatcac 623  Q
    ||||||||||||||||||||||||||||||||||    
T  34897026 ccaaaactcattaaaacaacaacaacttaatcac 34896993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 34897903 - 34897852
Alignment:
Q  16 ttcaacatattaaacacccaatcatctttgattcattcttattctatcatat 67  Q
    |||| |||||||||||| |||||||| | ||||||| |||||||||||||||    
T  34897903 ttcatcatattaaacactcaatcatcatcgattcatccttattctatcatat 34897852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 488
Target Start/End: Original strand, 7321251 - 7321319
Alignment:
Q  420 aatcacttaaactaacttttcatacaaaa-ctcaagtttcttcccaaaacatttcagaatcaaatcttat 488  Q
    |||||||||| ||| || ||||||||||| | |||||||||||||||||| ||||| || ||||||||||    
T  7321251 aatcacttaa-ctagctcttcatacaaaaacccaagtttcttcccaaaacttttcacaaccaaatcttat 7321319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 27402716 - 27402760
Alignment:
Q  7 atcatgacattcaacatattaaacacccaatcatctttgattcat 51  Q
    ||||||||||||| |||||||||| ||||||||||  ||||||||    
T  27402716 atcatgacattcatcatattaaacgcccaatcatcaatgattcat 27402760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 4e-52; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 43 - 266
Target Start/End: Original strand, 20109907 - 20110131
Alignment:
Q  43 ttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtcatgaaaacacattttaacaaggttcgtctattttcaaa 142  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||| || |||||||||| |||| |||||||||       
T  20109907 ttgattcattcttattctatcatatcatcttaatcatgaagctaattgcaagttatccggtcatgaaaccagattttaacaaagttcatctattttcgcc 20110006  T
Q  143 acttttatcattttctaa-gtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaagcatatacactactcatatatgaccacaatagcata 241  Q
    |||||   ||||| |||| |||||||  |||||||| |||||| ||| ||| ||||||||||||||||||||| || ||| |||||| || | |||||||    
T  20110007 actttctacatttcctaatgtaattcaacaaaacaatgtaaacttgtgcaaacacctcaaccaagcatatacattattcacatatgatcatagtagcata 20110106  T
Q  242 tgcatataagcatcatatgccaatt 266  Q
    | ||||||||||||||| |||||||    
T  20110107 ttcatataagcatcataggccaatt 20110131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 8 - 266
Target Start/End: Complemental strand, 23295361 - 23295101
Alignment:
Q  8 tcatgacattcaacatattaaacacccaatcatctttgattcattcttattctat--catatcatcttaagcacgaagctaattgcaagttatctggtca 105  Q
    |||||||||||| ||||||||||| |||| || | ||||||||||||||||||||  |||||||||||||||| | ||  |||||||||||||| |||      
T  23295361 tcatgacattcaccatattaaacatccaaccaacattgattcattcttattctatatcatatcatcttaagcatgtagtcaattgcaagttatccggttt 23295262  T
Q  106 tgaaaacacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaa 205  Q
    ||||| ||||||||||||| ||| ||||||||| |  |||||   ||||||||||||||||   ||||||||||||||||||  ||| ||||||||| |     
T  23295261 tgaaatcacattttaacaaagtttgtctattttaaccactttctacattttctaagtaattttacaaaacaaggtaaacatgagcaaacacctcaacaag 23295162  T
Q  206 gcatatacactactcatatatgaccacaatagcatatgcatataagcatcatatgccaatt 266  Q
    |||| |  |||||||| ||| ||  ||||||||||||||||||| || ||||| |||||||    
T  23295161 gcatgtgtactactcacataagattacaatagcatatgcatatacgcgtcataggccaatt 23295101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 14353384 - 14353537
Alignment:
Q  86 aattgcaagttatctggtcatgaaaacacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaaca 185  Q
    |||||||||||||| | |||||||| ||||||||||||| ||||||| |||||||  |||||   |||||||||||||||||| ||||||||||||||||    
T  14353384 aattgcaagttatccgatcatgaaatcacattttaacaaagttcgtcaattttcaccactttctacattttctaagtaattccacaaaacaaggtaaaca 14353483  T
Q  186 tgttcaaccacctcaaccaagcatatacactactcatatatgaccacaatagca 239  Q
    || |||| |||| ||||||||||||||||||||||| |||||| ||||||||||    
T  14353484 tgatcaaacaccccaaccaagcatatacactactcacatatgatcacaatagca 14353537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 112 - 264
Target Start/End: Original strand, 23298787 - 23298939
Alignment:
Q  112 cacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaagcatat 211  Q
    |||||||||| || ||||||||||||||| ||||||   |||||||||||||||||  |||||||||||||||| | |||| ||||| ||| ||||||||    
T  23298787 cacattttaataaagttcgtctattttcacaactttccacattttctaagtaattcaacaaaacaaggtaaacacgatcaaacacctaaacaaagcatat 23298886  T
Q  212 acactactcatatatgaccacaatagcatatgcatataagcatcatatgccaa 264  Q
    |||||||||| ||| || |||| ||||||||||||||| ||| |||| |||||    
T  23298887 acactactcacataagatcacagtagcatatgcatatacgcagcataggccaa 23298939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 12465635 - 12465437
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtc 104  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| | |  || ||   |||| ||||||||  |  |    
T  12465635 acatcatgacattcatcatattaaacacccaatcatcattgattcattcttattctatcatatcatcatgaatacaaaatcaattacaagttattcgacc 12465536  T
Q  105 atgaaaaca-cattttaacaaggttcgtctattttcaaaacttttatca-ttttctaagtaattc-cccaaaacaaggtaaacatgttcaaccacctcaa 201  Q
    || |||||| |||||| |||| ||||||||||||||| |||||| |||| ||||||||| ||||| || |||| |||| | |||||||||| ||||||||    
T  12465535 at-aaaacatcattttgacaaagttcgtctattttcacaactttcatcatttttctaagaaattcaccaaaaagaaggcatacatgttcaaacacctcaa 12465437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 12486768 - 12487000
Alignment:
Q  12 gacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtcatgaaa- 110  Q
    |||||||| |||||||||||||| |||||| |||||||||||||||||||| |||||||| | |  || |||| |||| ||| ||||| || ||| |||     
T  12486768 gacattcatcatattaaacaccccatcatcattgattcattcttattctataatatcatcatgaatacaaagccaattacaaattatccgggcatcaaac 12486867  T
Q  111 acacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatgttc-aaccacctcaaccaagcat 209  Q
    |    |||| |||| ||||||||||||||| || ||| || ||||| | |||||||| ||||||||||| | |||||||| |||  ||||||| ||||||    
T  12486868 attattttttacaaagttcgtctattttcacaaatttcattattttattagtaattcaccaaaacaaggcatacatgttcgaacaccctcaacaaagcat 12486967  T
Q  210 atacactactcatatatgaccacaatagcatat 242  Q
    ||||| || |||  ||||| |||| ||||||||    
T  12486968 atacaataatcacttatgatcacagtagcatat 12487000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 9520705 - 9520802
Alignment:
Q  10 atgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtcatg 107  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||| | | ||  |||| |||||||||||||| |||||||    
T  9520705 atgacattcatcaaattaaacacccaatcatcattgattcattcttattctatcatatcatcatgaacataaagccaattgcaagttatccggtcatg 9520802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 44 - 238
Target Start/End: Original strand, 14985488 - 14985682
Alignment:
Q  44 tgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtcatgaaaacacattttaacaaggttcgtctattttcaaaa 143  Q
    ||||||||||||||| || ||||||||| | |  |  || | |||||||||||||  |||||||||| || |||||||||| |||| ||||||||||  |    
T  14985488 tgattcattcttattttaccatatcatcatgaagataaaaccaattgcaagttattcggtcatgaaatcatattttaacaaagttcatctattttcacca 14985587  T
Q  144 cttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaagcatatacactactcatatatgaccacaatagc 238  Q
    ||||   ||| ||||||| || |   |||||||||||| |||||||||| || |||||| ||||||||| |||| ||| |||||| |||| ||||    
T  14985588 ctttctacatcttctaagcaagttaacaaaacaaggtatacatgttcaaacaactcaacaaagcatataaactagtcacatatgatcacagtagc 14985682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 23089949 - 23089887
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatat 67  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||    
T  23089949 acatcatgacattcatcatattaaacacccaaccatcattgattcattcttattctatcatat 23089887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 153 - 258
Target Start/End: Complemental strand, 19977957 - 19977852
Alignment:
Q  153 ttttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaagcatatacactactcatatatgaccacaatagcatatgcatataagc 252  Q
    |||| |||||| |||  |||||||| ||||||||| |||| |||||||||||||| ||||||||||||| ||||||  ||| |||| |||||||||| ||    
T  19977957 ttttttaagtatttcaacaaaacaatgtaaacatgatcaaacacctcaaccaagcttatacactactcacatatgatgacagtagcttatgcatataggc 19977858  T
Q  253 atcata 258  Q
    | ||||    
T  19977857 agcata 19977852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 14797361 - 14797427
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatc 71  Q
    |||||||| ||||||||||||||||||  ||||| || || ||||||||||||||||||||||||||    
T  14797361 acatcatggcattcaacatattaaacattcaatcgtcattaattcattcttattctatcatatcatc 14797427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 355 - 488
Target Start/End: Complemental strand, 15938356 - 15938213
Alignment:
Q  355 ctatcacattctacagaaaat--tcaagtttctcccatcccaaaataacttactcaaagtcactcata-------atcacttaaactaacttttcataca 445  Q
    |||||||||||||||||||||  ||| ||||||| |||||||||| ||||| |  ||| ||||| |||       || |||||| ||| |||||||||||    
T  15938356 ctatcacattctacagaaaatattcatgtttctctcatcccaaaacaacttgccaaaaatcacttatatttcaaaattacttaagctagcttttcataca 15938257  T
Q  446 aaactc-aagtttcttcccaaaacatttcagaatcaaatcttat 488  Q
    |||| | ||||||||||||||||||||||| || |||| |||||    
T  15938256 aaaccccaagtttcttcccaaaacatttcacaaccaaaacttat 15938213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 17913374 - 17913415
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttga 46  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  17913374 acatcatgacattcatcatattaaacacccaatcatcattga 17913415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 19978112 - 19978073
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatcttt 44  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  19978112 acatcttgacattcaatatattaaacacccaatcatcttt 19978073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 6e-48; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 6 - 258
Target Start/End: Complemental strand, 9167338 - 9167083
Alignment:
Q  6 catcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtca 105  Q
    |||||||||||||| |||||||||||| |||||| |||||||||||||||||| || ||||||||| | |  |  || | |||| |||||| || || ||    
T  9167338 catcatgacattcatcatattaaacactcaatcaactttgattcattcttattttaccatatcatcattaatataaaaccaattacaagttctccggcca 9167239  T
Q  106 ---tgaaaacacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaac 202  Q
       ||||| |||||||||||||  ||| |||||||||| ||||||   ||||||||||| |||||  ||||| ||||||||||||||| | |||||||||    
T  9167238 atatgaaaccacattttaacaaacttcctctattttcacaactttctacattttctaagcaattcaacaaaaaaaggtaaacatgttctaacacctcaac 9167139  T
Q  203 caagcatatacactactcatatatgaccacaatagcatatgcatataagcatcata 258  Q
     |||||||||||||||||| |||| | | |||||||||||||||||||||||||||    
T  9167138 aaagcatatacactactcacatattatcgcaatagcatatgcatataagcatcata 9167083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 86 - 266
Target Start/End: Original strand, 20407186 - 20407370
Alignment:
Q  86 aattgcaagttatctggtcatgaaaacacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaa-- 183  Q
    ||||| |||||||| ||||| |||| |||||||||||||  ||||||||||| || ||||||   ||||||||||| ||||   ||||||||||| ||      
T  20407186 aattgtaagttatccggtcaagaaatcacattttaacaaaattcgtctatttccagaactttctacattttctaagaaatttaacaaaacaaggtcaatg 20407285  T
Q  184 catgt--tcaaccacctcaaccaagcatatacactactcatatatgaccacaatagcatatgcatataagcatcatatgccaatt 266  Q
    |||||  |||| |||||||||||||||||||||||||||| |||||| | || ||| ||||||||||| |||||||| |||||||    
T  20407286 catgtgatcaaacacctcaaccaagcatatacactactcacatatgatcccagtagtatatgcatataggcatcataagccaatt 20407370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 5 - 211
Target Start/End: Complemental strand, 31354 - 31147
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtc 104  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||| ||||||| |||| ||||||||||||||  ||     
T  31354 acataatgacattcaacatattagacacccaatcatcattgattcattcttactctatcatatcatcataagcacaaagccaattgcaagttatccagtt 31255  T
Q  105 atgaaaacacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaa-acaaggtaaacatgttcaaccacctcaacc 203  Q
    || ||| | ||||| ||||| |||| |||||||||| |||||| || |||||||||||||||| |||||  ||||  | |||||||||| |||||||||     
T  31254 ataaaacctcatttcaacaaagttcatctattttcacaactttcattattttctaagtaattcaccaaagtcaagacatacatgttcaaacacctcaaca 31155  T
Q  204 aagcatat 211  Q
    ||||||||    
T  31154 aagcatat 31147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 5 - 211
Target Start/End: Original strand, 17508578 - 17508785
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtc 104  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| | | || || |||| |||||||||||||| | ||    
T  17508578 acatcatgacattcatcatattaaacacccaatcatcattgattcattcatattctatcatatcaacatgagtacaaagccaattgcaagttatccgatc 17508677  T
Q  105 atgaaaacacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaa-acaaggtaaacatgttcaaccacctcaacc 203  Q
    || ||| | ||||| ||||| |||||||||||| || ||  |||||| |||||| |||||||| ||||| |||||| | |||||||||| |||||||||     
T  17508678 ataaaacctcatttcaacaaagttcgtctatttccataaaatttatctttttcttagtaattcaccaaagacaaggcatacatgttcaaacacctcaaca 17508777  T
Q  204 aagcatat 211  Q
    ||||||||    
T  17508778 aagcatat 17508785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 107 - 242
Target Start/End: Original strand, 21686904 - 21687039
Alignment:
Q  107 gaaaacacattttaacaaggttcgtctattttcaaaacttt-tatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaa 205  Q
    |||| ||||||||||||| |||||||||||||||  ||||| ||| ||||||||||||||||  |||||||||||||||||| |||| ||||||||| |     
T  21686904 gaaaccacattttaacaaagttcgtctattttcaccactttctat-attttctaagtaattcaacaaaacaaggtaaacatgatcaaacacctcaacaag 21687002  T
Q  206 gcatatacactactcatatatgaccacaatagcatat 242  Q
    ||| |||||||||||| |||||| |||| || |||||    
T  21687003 gcacatacactactcacatatgatcacagtaccatat 21687039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 107 - 242
Target Start/End: Original strand, 21691228 - 21691363
Alignment:
Q  107 gaaaacacattttaacaaggttcgtctattttcaaaacttt-tatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaa 205  Q
    |||| ||||||||||||| |||||||||||||||  ||||| ||| ||||||||||||||||  |||||||||||||||||| |||| ||||||||| |     
T  21691228 gaaaccacattttaacaaagttcgtctattttcaccactttctat-attttctaagtaattcaacaaaacaaggtaaacatgatcaaacacctcaacaag 21691326  T
Q  206 gcatatacactactcatatatgaccacaatagcatat 242  Q
    ||| |||||||||||| |||||| |||| || |||||    
T  21691327 gcacatacactactcacatatgatcacagtaccatat 21691363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 283 - 400
Target Start/End: Original strand, 18828051 - 18828169
Alignment:
Q  283 ttcgtgcataaaattccaaccgttaatcagatttcgattatgttttcgtctatgcgtttcttacacttaatcctatcacattctacagaaaa-ttcaagt 381  Q
    |||| |||||||| || ||||||||||||||||| |||   || |||||||| | |||  |||||||||   |||||||||||||| ||||| |||||||    
T  18828051 ttcgcgcataaaactcaaaccgttaatcagattttgatgtcgtgttcgtctacgtgttcgttacacttagcactatcacattctaccgaaaaattcaagt 18828150  T
Q  382 ttctcccatcccaaaataa 400  Q
    |||||||||||||||||||    
T  18828151 ttctcccatcccaaaataa 18828169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 12517567 - 12517641
Alignment:
Q  183 acatgttcaaccacctcaaccaagcatatacactactcatatatgaccacaatagcatatgcatataagcatcata 258  Q
    ||||| |||| ||||||||| |||||||||||| ||||| ||| || |||| |||||||||||||| |||||||||    
T  12517567 acatgatcaaacacctcaacaaagcatatacaccactcacataagatcacagtagcatatgcatat-agcatcata 12517641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 24401391 - 24401475
Alignment:
Q  184 catgttcaaccacctcaaccaagcatatacactactcatatatgaccacaatagcatatgcatataagcatcatatgccaatttc 268  Q
    ||||||||| ||||||||| ||||||||||||   ||| |||||| |||| |||||||| |||||   ||||||| |||||||||    
T  24401391 catgttcaaacacctcaacaaagcatatacacatatcacatatgatcacagtagcatatacatatccacatcataagccaatttc 24401475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 21684779 - 21684817
Alignment:
Q  21 catattaaacacccaatcatctttgattcattcttattc 59  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  21684779 catattaaacacccaatcaacattgattcattcttattc 21684817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 21689128 - 21689166
Alignment:
Q  21 catattaaacacccaatcatctttgattcattcttattc 59  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  21689128 catattaaacacccaatcaacattgattcattcttattc 21689166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 25262297 - 25262351
Alignment:
Q  13 acattcaacatattaaacacccaatcatctttgattcattcttattctatcatat 67  Q
    ||||||| |||||||||||  || ||||| ||||||||||||||| |||||||||    
T  25262297 acattcaccatattaaacagtcattcatcattgattcattcttatcctatcatat 25262351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 25262469 - 25262551
Alignment:
Q  184 catgttcaaccacctcaaccaagcatatacactactcatatatgaccacaatagcatatgcatataagcatcatatgccaatt 266  Q
    ||||||||| ||||||||| |||||||||||||  ||| |||| | |||| |||||||| |||||   ||||||| |||||||    
T  25262469 catgttcaaacacctcaacaaagcatatacactcatcacatattatcacagtagcatatacatatccacatcataagccaatt 25262551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 616
Target Start/End: Original strand, 18828372 - 18828404
Alignment:
Q  584 ttttctccaaaactcattaaaacaacaacaact 616  Q
    |||||| ||||||||||||||||||||||||||    
T  18828372 ttttcttcaaaactcattaaaacaacaacaact 18828404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 21695380 - 21695412
Alignment:
Q  195 acctcaaccaagcatatacactactcatatatg 227  Q
    ||||||||||||||||||||||||||| |||||    
T  21695380 acctcaaccaagcatatacactactcacatatg 21695412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 4e-43; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 3 - 211
Target Start/End: Complemental strand, 17162298 - 17162089
Alignment:
Q  3 caacatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctgg 102  Q
    ||||||||||||||||| |||||||||| || ||||||| || |||||||||||||||||||||||||| ||||||| |||| |||| |||| ||||  |    
T  17162298 caacatcatgacattcatcatattaaacccctaatcatcatttattcattcttattctatcatatcatcataagcacaaagccaattacaagctatccag 17162199  T
Q  103 tcatgaaaacacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaa-acaaggtaaacatgttcaaccacctcaa 201  Q
      || ||| | ||||| ||||| ||||||||||||||| |||||| ||||||||||||||||||| ||||| | |||| | ||| |||||| ||||||||    
T  17162198 gtataaaacctcatttcaacaaagttcgtctattttcacaactttcatcattttctaagtaattcaccaaagaaaaggcatacacgttcaaacacctcaa 17162099  T
Q  202 ccaagcatat 211  Q
    | ||||||||    
T  17162098 caaagcatat 17162089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 291 - 406
Target Start/End: Complemental strand, 3170827 - 3170712
Alignment:
Q  291 taaaattccaaccgttaatcagatttcgattatgttttcgtctatgcgtttcttacacttaatcctatcacattctacagaaaattcaagtttctcccat 390  Q
    |||||||| ||| ||||||  | |||||||| |||||||| |||  |||| |||| |||||   ||||||||||||||| |||||||| |||||||||||    
T  3170827 taaaattcaaactgttaattcgttttcgattctgttttcgcctacacgttccttaaacttagctctatcacattctacaaaaaattcatgtttctcccat 3170728  T
Q  391 cccaaaataacttact 406  Q
    ||||||| | ||||||    
T  3170727 cccaaaacagcttact 3170712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 420 - 506
Target Start/End: Complemental strand, 3170680 - 3170594
Alignment:
Q  420 aatcacttaaactaacttttcatacaaaactcaagtttcttcccaaaacatttcagaatcaaatcttatgattcaaaactgaagttc 506  Q
    ||||||||||| ||||||| |||||||||| |||||||||||| ||||||||||| || |||| ||||| | | ||||| |||||||    
T  3170680 aatcacttaaattaactttgcatacaaaacccaagtttcttccaaaaacatttcacaaccaaagcttataactaaaaacagaagttc 3170594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 20147623 - 20147689
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatc 71  Q
    |||||| |||||||| |||||| |||||||||||||  ||| |||||||||||||||||||||||||    
T  20147623 acatcaagacattcatcatattgaacacccaatcattattggttcattcttattctatcatatcatc 20147689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 3171371 - 3171288
Alignment:
Q  145 ttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaagcatatacactactcatatatga 228  Q
    |||| |||||||||| ||  |||  |||||||||  ||||| |||||| ||||||||| |||||||||||||||||| ||||||    
T  3171371 ttttgtcattttctatgtttttcaacaaaacaagccaaacaagttcaaacacctcaacaaagcatatacactactcacatatga 3171288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 6461138 - 6461080
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatc 63  Q
    ||||||||||  ||| |||||||||||||||| |||| ||| |||||||||||||||||    
T  6461138 acatcatgactatcatcatattaaacacccaaccatcattgtttcattcttattctatc 6461080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 13488261 - 13488396
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtc 104  Q
    ||||||||||||||| || |||| | | |||| ||||  |||||||||||||||||||| ||||||  | |  || |||  | |||||||||||| | ||    
T  13488261 acatcatgacattcatcacattataaatccaaccatccatgattcattcttattctatcctatcattatgattacaaagtcatttgcaagttatccgatc 13488360  T
Q  105 atgaaaacacattttaacaaggttcgtctattttca 140  Q
    ||  || | |||||| |||| |||||||||||||||    
T  13488361 atagaacctcattttgacaaagttcgtctattttca 13488396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 15009942 - 15009847
Alignment:
Q  288 gcataaaattccaaccgttaatcagatttcgattatgttttcgtctatgcgtttcttacacttaatcctatcacattctacagaaaattcaagttt 383  Q
    |||||||||||  | |||||||| |||||||||| |||||||  ||| ||||| |   ||||||| ||||||||||||||||| ||| ||| ||||    
T  15009942 gcataaaattctgatcgttaatccgatttcgattctgttttctcctacgcgttccaatcacttaaacctatcacattctacagtaaaatcatgttt 15009847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15010243 - 15010193
Alignment:
Q  1 aacaacatcatgacattcaacatattaaacacccaatcatctttgattcat 51  Q
    |||||||||| ||||| || |||||||||||||| |||||| |||||||||    
T  15010243 aacaacatcacgacatccatcatattaaacaccccatcatcattgattcat 15010193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 584 - 629
Target Start/End: Complemental strand, 3170515 - 3170470
Alignment:
Q  584 ttttctccaaaactcattaaaacaacaacaacttaatcacaacaca 629  Q
    |||||| |||||| ||||||||||||||||| |||||| |||||||    
T  3170515 ttttcttcaaaacacattaaaacaacaacaaattaatcgcaacaca 3170470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 16093869 - 16093926
Alignment:
Q  10 atgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatat 67  Q
    |||||||||| ||||||||||| ||||||||  || ||| |||| |||||||||||||    
T  16093869 atgacattcatcatattaaacatccaatcatgattaattaattcctattctatcatat 16093926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 16196112 - 16196153
Alignment:
Q  12 gacattcaacatattaaacacccaatcatctttgattcattc 53  Q
    |||||||| ||||||||||||||| ||||| |||||||||||    
T  16196112 gacattcaccatattaaacacccattcatcattgattcattc 16196153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 5 - 258
Target Start/End: Complemental strand, 12451806 - 12451554
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtc 104  Q
    |||||| |||||||| ||||||||||| ||||||| | ||||||||||||||||||||||||| ||| | | ||  || | |||||||||||||| | ||    
T  12451806 acatcacgacattcatcatattaaacatccaatcaacattgattcattcttattctatcatattatcatgaacataaacc-aattgcaagttatccgctc 12451708  T
Q  105 atgaaaacacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaacca 204  Q
    || ||| |||||||| |||| ||| ||||||||| | ||||||   ||||||| ||||||||   |||||||| |||||| |||||||  ||| |||||     
T  12451707 ataaaatcacattttgacaaagtttgtctatttttacaactttctacattttccaagtaatttgacaaaacaatgtaaacgtgttcaaataccccaacct 12451608  T
Q  205 agcatatacactactcatatatgaccacaatagcatatgcatataagcatcata 258  Q
    || | |||| ||||||| |||||| |||| |||||||||||| |||||||||||    
T  12451607 agtacatacgctactcacatatgatcacagtagcatatgcatgtaagcatcata 12451554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 114 - 266
Target Start/End: Original strand, 18173822 - 18173974
Alignment:
Q  114 cattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaagcatatac 213  Q
    |||||| |||| ||||||||||||||  |||||| |  ||||||||||||||||  ||||| ||||||||||| ||||| ||||||||| |||||||||     
T  18173822 catttttacaaagttcgtctattttcttaactttcaatattttctaagtaattcaacaaaataaggtaaacatattcaaacacctcaacaaagcatatat 18173921  T
Q  214 actactcatatatgaccacaatagcatatgcatataagcatcatatgccaatt 266  Q
    |||||||| |||||| ||||||||||| |||||||| |||||||| |||||||    
T  18173922 actactcacatatgatcacaatagcatctgcatatacgcatcataggccaatt 18173974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 145 - 266
Target Start/End: Original strand, 16570777 - 16570898
Alignment:
Q  145 ttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaagcatatacactactcatatatgaccacaatagcatatgc 244  Q
    |||||||||||||||||| ||||  |||||||||  ||||| | |||| |||||||||||| ||||||||||||||| |||||| |||||||||||||||    
T  16570777 ttttatcattttctaagttattcagcaaaacaagccaaacaaggtcaaacacctcaaccaaacatatacactactcacatatgatcacaatagcatatgc 16570876  T
Q  245 atataagcatcatatgccaatt 266  Q
    ||||| |||||||| |||||||    
T  16570877 atataggcatcataggccaatt 16570898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 126 - 266
Target Start/End: Original strand, 17959003 - 17959143
Alignment:
Q  126 gttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaagcatatacactactcatata 225  Q
    ||||||||||||| | |||||| ||||||||||||||||||   |||||||| ||| ||||||||||  |||||||| |||||||| |||| |||  |||    
T  17959003 gttcgtctattttaacaactttcatcattttctaagtaatttgacaaaacaaagtatacatgttcaaagacctcaacaaagcatatccactgctcggata 17959102  T
Q  226 tgaccacaatagcatatgcatataagcatcatatgccaatt 266  Q
    ||| |||| ||||||||||||||| |||||||| |||||||    
T  17959103 tgatcacagtagcatatgcatatacgcatcataggccaatt 17959143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 9198053 - 9198188
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtc 104  Q
    ||||||||||||||| || |||||||||||| ||||  | |||||||||||||| |||||||||||| | |  |  |||| |||||||||||||| | ||    
T  9198053 acatcatgacattcatcaaattaaacacccactcattgtggattcattcttattatatcatatcatcatgaatataaagccaattgcaagttatccgatc 9198152  T
Q  105 atgaaaacacattttaacaaggttcgtctattttca 140  Q
    || ||| | ||||| ||||| |||| ||||||||||    
T  9198153 ataaaacctcatttcaacaaagttcatctattttca 9198188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 9269419 - 9269554
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtc 104  Q
    ||||||||||||||| || |||||||||| | ||||| |||||||||||||||| ||  |||||||| | |  |  |||  |||||||||||||  ||||    
T  9269419 acatcatgacattcatcaaattaaacaccgactcatccttgattcattcttattataaaatatcatcatgaatataaagtcaattgcaagttattcggtc 9269518  T
Q  105 atgaaaacacattttaacaaggttcgtctattttca 140  Q
    || ||| | ||||| ||||| |||||||||||||||    
T  9269519 ataaaacctcatttcaacaaagttcgtctattttca 9269554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 18420091 - 18420025
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatc 71  Q
    ||||||| ||||| | || |||||||||||||||||| ||||||||||||||||||||| |||||||    
T  18420091 acatcataacatttatcaaattaaacacccaatcatcattgattcattcttattctatcttatcatc 18420025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 10115597 - 10115462
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtc 104  Q
    |||||||||||||||  ||||||||||||||| ||||  |||||||||||||||||||| ||| ||| | |  || |||| | |||| ||||||| | ||    
T  10115597 acatcatgacattcataatattaaacacccaaccatcaatgattcattcttattctatcctattatcgtgaatacaaagccatttgcgagttatccgatc 10115498  T
Q  105 atgaaaacacattttaacaaggttcgtctattttca 140  Q
    || ||| | |||||| |||| |||| | ||||||||    
T  10115497 ataaaatctcattttgacaaagttcatatattttca 10115462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 343 - 428
Target Start/End: Original strand, 28800592 - 28800678
Alignment:
Q  343 ttacacttaatcctatcacattctac-agaaaattcaagtttctcccatcccaaaataacttactcaaagtcactcataatcactta 428  Q
    ||||||||||  |||||| ||||||| |||||| ||| |||||||| ||||||||||| |||||||||| ||||| |||| ||||||    
T  28800592 ttacacttaacactatcatattctaccagaaaaatcatgtttctccaatcccaaaatagcttactcaaaatcacttataaccactta 28800678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 9251632 - 9251765
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtc 104  Q
    |||||| |||||||| || |||||||||  | ||||| |||||||||||||||| ||  |||||||| | |  |  |||  |||||||||||||| ||||    
T  9251632 acatcaagacattcatcaaattaaacacggactcatccttgattcattcttattataaaatatcatcatgaatataaagtcaattgcaagttatccggtc 9251731  T
Q  105 atgaaaacacattttaacaaggttcgtctatttt 138  Q
    || ||| | ||||| ||||| |||||||||||||    
T  9251732 ataaaacctcatttcaacaaagttcgtctatttt 9251765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 9220830 - 9220896
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatc 71  Q
    ||||||||||||||| || |||||||  ||| ||||| | |||||||||| ||| ||||||||||||    
T  9220830 acatcatgacattcatcaaattaaacgaccactcatcgtggattcattctaattttatcatatcatc 9220896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 118 - 266
Target Start/End: Complemental strand, 208600 - 208452
Alignment:
Q  118 ttaacaaggttcgtctattttcaaaacttt-tatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaagcatatacact 216  Q
    ||||||| ||| |||||||| || |||||| ||| ||||||||||||||||   |||||||||||||| || |||| |||||||||||||||||||||||    
T  208600 ttaacaaagtttgtctatttccacaactttctat-attttctaagtaattcaataaaacaaggtaaacgtgatcaaacacctcaaccaagcatatacact 208502  T
Q  217 actcatatatgaccacaatagcatatgcatataagcatcatatgccaatt 266  Q
    ||||| |||||| ||||||| |||||||||| | |||||||| |||||||    
T  208501 actcacatatgatcacaataacatatgcatacaggcatcataggccaatt 208452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 43 - 266
Target Start/End: Complemental strand, 211782 - 211559
Alignment:
Q  43 ttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtcatgaaaacacattttaacaaggttcgtctattttcaaa 142  Q
    ||||||||||||||| ||||||||  ||| | | ||  || | ||||| ||||||||  |||| |||| ||||  ||||||| ||| ||||||||    |    
T  211782 ttgattcattcttatactatcatactatcatgaacataaaaccaattgtaagttatccagtcaagaaatcacacattaacaaagtttgtctatttctgca 211683  T
Q  143 acttt-tatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaagcatatacactactcatatatgaccacaatagcata 241  Q
    ||||| ||| ||||||||||||||||   ||| |||||||||| || |||| |||||||||||| ||||||||||||||| |||||| |||| |||||||    
T  211682 actttctat-attttctaagtaattcaataaagcaaggtaaacgtgatcaaacacctcaaccaaacatatacactactcacatatgatcacagtagcata 211584  T
Q  242 tgcatataagcatcatatgccaatt 266  Q
    | |||||| |||||||| |||||||    
T  211583 ttcatataggcatcataggccaatt 211559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2017 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold2017
Description:

Target: scaffold2017; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 113 - 266
Target Start/End: Original strand, 748 - 901
Alignment:
Q  113 acattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaagcatata 212  Q
    |||||||||||| |||||||||||| || |||||||  ||||||||||  |||||  |||||||||||||||||| ||||  | |||||||||  |||||    
T  748 acattttaacaaagttcgtctatttccacaactttttacattttctaataaattcgacaaaacaaggtaaacatgatcaaatatctcaaccaaaaatata 847  T
Q  213 cactactcatatatgaccacaatagcatatgcatataagcatcatatgccaatt 266  Q
    || |||||| |||||| |||| |||| ||| |||||| |||||||| |||||||    
T  848 caatactcacatatgatcacagtagcttatacatataggcatcataggccaatt 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 380 - 508
Alignment:
Q  115 attttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaagcatataca 214  Q
    ||||| |||| ||||||||||||||| |||||| | ||||||||||||||||   |||||||||||||||||| |||| ||||||||| ||| ||||| |    
T  380 attttgacaaagttcgtctattttcacaactttcaacattttctaagtaatttaacaaaacaaggtaaacatgatcaaacacctcaacaaagtatatata 479  T
Q  215 ctactcatatatgaccacaatagcatatg 243  Q
    ||||||| ||| || |||| |||||||||    
T  480 ctactcacataagatcacagtagcatatg 508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 12805128 - 12805216
Alignment:
Q  170 caaaacaaggtaaacatgttcaaccacctcaaccaagcatatacactactcatatatgaccacaatagcatatgcatataagcatcata 258  Q
    ||||||||||||||| || | || |||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| ||||||||    
T  12805128 caaaacaaggtaaacgtgattaaacacctcaaccaagcatatacactactcacatatgatcacaatagcttatgcatataggcatcata 12805216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 9637292 - 9637234
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatc 63  Q
    ||||||||||||||| |||||| |||| ||||||||| |||||||||||||||| ||||    
T  9637292 acatcatgacattcatcatatttaacatccaatcatcattgattcattcttattatatc 9637234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 291 - 416
Target Start/End: Complemental strand, 15045756 - 15045630
Alignment:
Q  291 taaaattccaaccgttaatcagatttcgattatgttttcgtctatgcgtttcttacacttaatcctatcacattctacag-aaaattcaagtttctccca 389  Q
    |||||||| |||  |||||| || || ||||  ||||||| ||| ||||| |||||||||| | || ||||||||||||| |||||||| ||||| ||||    
T  15045756 taaaattcaaacgattaatccgaatttgattccgttttcgcctacgcgttccttacacttagttctttcacattctacagaaaaattcatgtttccccca 15045657  T
Q  390 tcccaaaataacttactcaaagtcact 416  Q
    | |||||| | |||||||||| |||||    
T  15045656 ttccaaaacagcttactcaaaatcact 15045630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 181 - 266
Target Start/End: Original strand, 5346657 - 5346741
Alignment:
Q  181 aaacatgttcaaccacctcaaccaagcatatacactactcatatatgaccacaatagcatatgcatataagcatcatatgccaatt 266  Q
    ||||| ||||||| |||||||||||||| | | |||||||| | |||| |||| ||||||||||||||| |||||||| |||||||    
T  5346657 aaacaagttcaac-acctcaaccaagcaaacatactactcacacatgatcacagtagcatatgcatataggcatcataagccaatt 5346741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 17385827 - 17385878
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattctta 56  Q
    ||||||||||| ||| ||||||||||||||||  ||| ||||||||||||||    
T  17385827 acatcatgacaatcatcatattaaacacccaactatcattgattcattctta 17385878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 11833576 - 11833522
Alignment:
Q  13 acattcaacatattaaacacccaatcatctttgattcattcttattctatcatat 67  Q
    |||||| |||||||| ||||||||||||| |  ||||||||| ||||||||||||    
T  11833576 acattccacatattagacacccaatcatcatcaattcattctcattctatcatat 11833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 2547641 - 2547600
Alignment:
Q  12 gacattcaacatattaaacacccaatcatctttgattcattc 53  Q
    |||||||| |||||||||||| |||||||| |||||||||||    
T  2547641 gacattcatcatattaaacactcaatcatcattgattcattc 2547600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 12794338 - 12794399
Alignment:
Q  7 atcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatc 68  Q
    ||||||||||||| |||||| ||||||||| | || | ||||| ||||||||||||| ||||    
T  12794338 atcatgacattcatcatatttaacacccaaacttcatcgattcgttcttattctatcctatc 12794399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 488
Target Start/End: Original strand, 15550335 - 15550403
Alignment:
Q  420 aatcacttaaactaacttttcatacaaaa-ctcaagtttcttcccaaaacatttcagaatcaaatcttat 488  Q
    |||||||||| ||| || ||||||||||| | |||||||||||||||||| ||||| || ||||||||||    
T  15550335 aatcacttaa-ctagctcttcatacaaaaacccaagtttcttcccaaaacttttcacaaccaaatcttat 15550403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 488
Target Start/End: Complemental strand, 37916713 - 37916645
Alignment:
Q  420 aatcacttaaactaacttttcatacaaaa-ctcaagtttcttcccaaaacatttcagaatcaaatcttat 488  Q
    |||||||||| ||| || ||||||||||| | |||||||||||||||||| ||||| || ||||||||||    
T  37916713 aatcacttaa-ctagctcttcatacaaaaacccaagtttcttcccaaaacttttcacaaccaaatcttat 37916645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 5 - 211
Target Start/End: Original strand, 2640 - 2846
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtc 104  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||||||||||| |||||||||||||| | |  || |||| ||||  |||||||  |  |    
T  2640 acatcatgacattcatcatattaaacaccaaatcatcattgattcattctta-tctatcatatcatcatgaatacaaagccaattaaaagttattcgaac 2738  T
Q  105 atgaaaacacattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaa-aacaaggtaaacatgttcaaccacctcaacc 203  Q
    ||  || | || ||| |||| ||||||||||||||| ||| || ||| ||||||||||||||| ||||  |||||| | |||||||||| ||| |||||     
T  2739 atacaacctcaatttgacaaagttcgtctattttcacaacattcatctttttctaagtaattcaccaaggacaaggaatacatgttcaaacacatcaaca 2838  T
Q  204 aagcatat 211  Q
    ||| ||||    
T  2839 aagtatat 2846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 114 - 220
Target Start/End: Complemental strand, 9216 - 9110
Alignment:
Q  114 cattttaacaaggttcgtctattttcaaaacttttatcattttctaagtaattccccaaaacaaggtaaacatgttcaaccacctcaaccaagcatatac 213  Q
    |||||| |||| ||||||||||||||  |||||| |  ||||||||||||||||  ||||| ||||||||||| ||||| ||||||||| |||||||||     
T  9216 catttttacaaagttcgtctattttcttaactttcaatattttctaagtaattcaacaaaataaggtaaacatattcaaacacctcaacaaagcatatat 9117  T
Q  214 actactc 220  Q
    |||||||    
T  9116 actactc 9110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 53718 - 53806
Alignment:
Q  170 caaaacaaggtaaacatgttcaaccacctcaaccaagcatatacactactcatatatgaccacaatagcatatgcatataagcatcata 258  Q
    |||||||||| |||| || |||| ||||||||||||||| |||||||||| | |||||| ||||||||| |||||||||| | ||||||    
T  53718 caaaacaagggaaacgtgatcaaacacctcaaccaagcacatacactactgacatatgatcacaatagcttatgcatataggtatcata 53806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 57670 - 57758
Alignment:
Q  170 caaaacaaggtaaacatgttcaaccacctcaaccaagcatatacactactcatatatgaccacaatagcatatgcatataagcatcata 258  Q
    |||||||||| |||| || |||| ||||||||||||||| |||||||||| | |||||| ||||||||| |||||||||| | ||||||    
T  57670 caaaacaagggaaacgtgatcaaacacctcaaccaagcacatacactactgacatatgatcacaatagcttatgcatataggtatcata 57758  T

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Target: scaffold0023 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 293 - 410
Target Start/End: Complemental strand, 61841 - 61724
Alignment:
Q  293 aaattccaaccgttaatcagatttcgattatgttttcgtctatgcgtttcttacacttaatcctatcacattctacagaaaattcaagtttctcccatcc 392  Q
    |||||| ||||||||||| ||||| ||||  ||||||||||| ||||| |||||||||||  |||||  |||| |||||||||||| ||| |  ||||||    
T  61841 aaattcaaaccgttaatccgattttgatttcgttttcgtctacgcgttccttacacttaactctatcttattccacagaaaattcatgttccaaccatcc 61742  T
Q  393 caaaataacttactcaaa 410  Q
    ||||| || |||| ||||    
T  61741 caaaacaaattacccaaa 61724  T

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Target: scaffold0205 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 420 - 488
Target Start/End: Complemental strand, 1489 - 1421
Alignment:
Q  420 aatcacttaaactaacttttcatacaaaactcaagtttcttcccaaaacatttcagaatcaaatcttat 488  Q
    |||||||||||||||||||| ||||||||| ||| |||||||||||||| ||||| || |||| |||||    
T  1489 aatcacttaaactaacttttgatacaaaacccaaatttcttcccaaaacttttcacaaccaaaacttat 1421  T

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Target: scaffold0959 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0959
Description:

Target: scaffold0959; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 759 - 894
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatcttaagcacgaagctaattgcaagttatctggtc 104  Q
    ||||||||| ||||| || |||||||||||| ||||| || ||||||  ||| |||||||||  ||| | |  |  |||| |||||||||||||| ||||    
T  759 acatcatgaaattcaccaaattaaacacccattcatcgtttattcatatttactctatcataaaatcatgaatataaagccaattgcaagttatccggtc 858  T
Q  105 atgaaaacacattttaacaaggttcgtctattttca 140  Q
    || ||| | ||||| ||||| |||||||||||||||    
T  859 ataaaatctcatttcaacaaagttcgtctattttca 894  T

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Target: scaffold0126 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 16464 - 16406
Alignment:
Q  13 acattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatc 71  Q
    ||||||||| || | |||||||||||||| |  ||||||||||||||||||||||||||    
T  16464 acattcaacgtaattaacacccaatcatcatcaattcattcttattctatcatatcatc 16406  T

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Target: scaffold0118 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 16426 - 16354
Alignment:
Q  194 cacctcaaccaagcatatacactactcatatatgaccacaatagcatatgcatataagcatcatatgccaatt 266  Q
    ||||||||||||||| | | |||||||||| ||||  ||| ||||||||||||||| ||||| || |||||||    
T  16426 cacctcaaccaagcacacatactactcatacatgatgacagtagcatatgcatataggcatcgtaggccaatt 16354  T

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Target: scaffold0193 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 619
Target Start/End: Original strand, 18704 - 18742
Alignment:
Q  581 cccttttctccaaaactcattaaaacaacaacaacttaa 619  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  18704 cccttttctccaaaactcattaaattaacaacaacttaa 18742  T

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Target: scaffold0135 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 31481 - 31547
Alignment:
Q  5 acatcatgacattcaacatattaaacacccaatcatctttgattcattcttattctatcatatcatc 71  Q
    ||||||||||||||| || |||||||  ||| ||||| | |||||||||| ||| ||||||||||||    
T  31481 acatcatgacattcatcaaattaaacgaccactcatcgtggattcattctaattttatcatatcatc 31547  T

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