View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7752_low_2 (Length: 521)
Name: NF7752_low_2
Description: NF7752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7752_low_2 |
 | |
|
| [»] scaffold0004 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 293; Significance: 1e-164; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 18 - 427
Target Start/End: Complemental strand, 16846916 - 16846505
Alignment:
| Q |
18 |
aatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaagat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||| ||||||||||||||||| |||||| | |
|
|
| T |
16846916 |
aatccacacaacattgtatttccttcataggaatcatttccaaatgtagaaaattgttgacctgtaggtatgactccctcaaggtggttttttgaaaggt |
16846817 |
T |
|
| Q |
118 |
tcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaaccaccccaaatgtctcaatttact |
217 |
Q |
| |
|
||||||| || ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
16846816 |
tcaagaaagaaaggaaattcaaatttgtcaaagccacaggaatctctcccgtcatttggttccttgagaggtccaaccactccaaatgtctcaatttact |
16846717 |
T |
|
| Q |
218 |
cagatattg--gaatggtacctgtgattctactgtttgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttccttcaaac |
315 |
Q |
| |
|
|| | |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
16846716 |
caaagattgtggaatggtacctgtgattctattgtttgaaaggttaagacctttgagagaatttaattctccaatgacctctggaatttttccttcaaac |
16846617 |
T |
|
| Q |
316 |
atgttatttgataaatcaatagttgtaaaagtagtcaatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcattatagtaat |
415 |
Q |
| |
|
|||||||||||||||||||||||||| ||| |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
16846616 |
atgttatttgataaatcaatagttgtgaaaatagtcaatatccttgttaactccatagaaaaacctttcactatgaccaccacagaatcattatagtaat |
16846517 |
T |
|
| Q |
416 |
tgaccttgccca |
427 |
Q |
| |
|
||||||| |||| |
|
|
| T |
16846516 |
tgacctttccca |
16846505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 427
Target Start/End: Complemental strand, 16844249 - 16843838
Alignment:
| Q |
18 |
aatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaagat |
117 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||| |||||||||||||| ||| ||||| ||||||||||||||||| | || ||||||||||||||| | |
|
|
| T |
16844249 |
aatccacacaacattgtattcccttgataggaatcatttccaaatgtattaaattgttgacctgtaggtatgattcctttaaagtggttttgtgaaaggt |
16844150 |
T |
|
| Q |
118 |
tcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaaccaccccaaatgtctcaatttact |
217 |
Q |
| |
|
| ||||| || |||||||||||||||| |||||| | ||||||| ||||||| |||||| | |||||||||||||||| |||||| |||||| | ||| |
|
|
| T |
16844149 |
ttaagaaagaaaggaaattcaaatttgccaaagcctcaagaatctctcccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgact |
16844050 |
T |
|
| Q |
218 |
cagatattg--gaatggtacctgtgattctactgtttgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttccttcaaac |
315 |
Q |
| |
|
|| | |||| ||||| |||| ||||||| | | |||||||||||||| || ||||||||| ||| |||||||||| ||| ||||||| ||||||||| |
|
|
| T |
16844049 |
caaagattgtggaatgctacccgtgattccattttttgaaaggttaagtccaatgagagaatataactctccaatgacttgtggaatttcaccttcaaac |
16843950 |
T |
|
| Q |
316 |
atgttatttgataaatcaatagttgtaaaagtagtcaatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcattatagtaat |
415 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| || ||||||| |
|
|
| T |
16843949 |
atgttatttgataaatcaatagttgtgaaagtagtcaatatccttgttagctccatagaaaaacctttcactatgaccaccacagaatcgttgtagtaat |
16843850 |
T |
|
| Q |
416 |
tgaccttgccca |
427 |
Q |
| |
|
|| || |||||| |
|
|
| T |
16843849 |
tgtccgtgccca |
16843838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 17 - 427
Target Start/End: Complemental strand, 24218985 - 24218573
Alignment:
| Q |
17 |
aaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaaga |
116 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||| |||||||||||| | ||| |||||||| |||||||||||||||| || |||||||||||||| |
|
|
| T |
24218985 |
aaatccacataacattgcatttccttcataggaatcatttccaaatgtgttaaattgttggccggtaggtatgattcccttgagatggttttgtgaaagg |
24218886 |
T |
|
| Q |
117 |
ttcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaaccaccccaaatgtctcaatttac |
216 |
Q |
| |
|
|| || || |||||||||||||||||||||||||| |||||||||| ||| ||| | ||| |||||||||||||||||| |||||| || ||| |||| |
|
|
| T |
24218885 |
tttaaaaaagagaggaaattcaaatttgtcaaagccataggaatcttaccactcaagttgtttcttgagaggtccaaccactccaaatttcgcaaattac |
24218786 |
T |
|
| Q |
217 |
tcagatattg--gaatggtacctgtgattctactgtttgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttccttcaaa |
314 |
Q |
| |
|
||| | |||| ||||||||||| ||||| | ||| |||||||||||| ||||||||| ||||||||| ||||||| ||| ||||||| ||||||||| |
|
|
| T |
24218785 |
tcaaagattgtggaatggtacctatgatttgattgtgtgaaaggttaaggcctttgagaaaatttaatttcccaatgacttgtggaatttctccttcaaa |
24218686 |
T |
|
| Q |
315 |
catgttatttgataaatcaatagttgtaaaagtagtcaatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcattatagtaa |
414 |
Q |
| |
|
||||||||| ||||||||||| ||||| |||||||||| |||||| ||||||| |||||||| ||||||||||||| |||||||||||||||||| ||| |
|
|
| T |
24218685 |
catgttattcgataaatcaatcgttgtgaaagtagtcagtatcctcgttagctctatagaaaagcctttcattatgatcaccacagaatcattataataa |
24218586 |
T |
|
| Q |
415 |
ttgaccttgccca |
427 |
Q |
| |
|
||| |||| |||| |
|
|
| T |
24218585 |
ttggccttaccca |
24218573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 489
Target Start/End: Original strand, 20196236 - 20196273
Alignment:
| Q |
452 |
aatcaattcacctgaattaaattaaatctaaatcttta |
489 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
20196236 |
aatcaattcaccttaattaaattaaatcttaatcttta |
20196273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 263; Significance: 1e-146; HSPs: 17)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 18 - 417
Target Start/End: Original strand, 37434617 - 37435018
Alignment:
| Q |
18 |
aatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaagat |
117 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |||| |||||||| |||| ||||| || |||||||||| ||||||||||||||| | |||||| | |
|
|
| T |
37434617 |
aatccacataacattgtatttccttcataggaatcattttcaaatgtagcaaattgttgacccgtaggtatgactccctcaaggtggttgtttgaaaggt |
37434716 |
T |
|
| Q |
118 |
tcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaaccaccccaaatgtctcaatttact |
217 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| | |||||| |||||||||| ||||| |||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
37434717 |
tcaagaatgataggaaattcaaatttgtcaaagccacaggaatttcacccgtcaactggttttttgagaggtctaaccactccaaatgtctcaatttact |
37434816 |
T |
|
| Q |
218 |
cagatattg--gaatggtacctgtgattctactgtttgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttccttcaaac |
315 |
Q |
| |
|
|| | |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||| |
|
|
| T |
37434817 |
caaagattgtggaatggtacctgtgattctattgtttgaaaggttaagacctttgagagaatttaattctccaatgactagaggaatttttccttcaaac |
37434916 |
T |
|
| Q |
316 |
atgttatttgataaatcaatagttgtaaaagtagtcaatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcattatagtaat |
415 |
Q |
| |
|
| |||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
37434917 |
aagttatttgataaatcaatagttgtgaaagtagtcaatatctttgttagctccatagaaaaacctttcattgtgaccaccacagaatcattatagtaat |
37435016 |
T |
|
| Q |
416 |
tg |
417 |
Q |
| |
|
|| |
|
|
| T |
37435017 |
tg |
37435018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 18 - 414
Target Start/End: Original strand, 37701593 - 37701991
Alignment:
| Q |
18 |
aatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaagat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37701593 |
aatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaagat |
37701692 |
T |
|
| Q |
118 |
tcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaaccaccccaaatgtctcaatttact |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||| |||| | ||| | ||||| |
|
|
| T |
37701693 |
tcaagaatgagaggaaattcaaatttgtcaaagccgcgggaatctcacccgtcaaacggttcctggagaggtccaaccactccaagtttcttagattact |
37701792 |
T |
|
| Q |
218 |
c--agatattggaatggtacctgtgattctactgtttgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttccttcaaac |
315 |
Q |
| |
|
| |||| ||||||| |||||||||||| | |||||||||||||||| ||||| ||||||| |||||||||||||| ||| |||||| | ||||||||| |
|
|
| T |
37701793 |
caaagattgtggaatgctacctgtgattccattgtttgaaaggttaagtcctttaagagaatataattctccaatgacttgtggaattctaccttcaaac |
37701892 |
T |
|
| Q |
316 |
atgttatttgataaatcaatagttgtaaaagtagtcaatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcattatagtaa |
414 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
37701893 |
atgttatttgataaatcaatagttgtgaaagtcgtcaatatcctttttagctccatgaaaaaacctttcactatgaccaccacagaatcattgtagtaa |
37701991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 18 - 415
Target Start/End: Original strand, 37532007 - 37532406
Alignment:
| Q |
18 |
aatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaagat |
117 |
Q |
| |
|
||||||||||||||||||||||||||| | |||| |||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||| | |
|
|
| T |
37532007 |
aatccacacaacattgtatttccttcaaaagaatcatttccaaatgtattaaactgttgacctttaggtatgattccctcaaggtggttttgtgaaaggt |
37532106 |
T |
|
| Q |
118 |
tcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaaccaccccaaatgtctcaatttact |
217 |
Q |
| |
|
| |||| ||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||| | |||||||||||||||| |||||| |||||| | ||| |
|
|
| T |
37532107 |
ttaagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttcaattggttgcatgagaggtccaaccactccaaatttctcaaatgact |
37532206 |
T |
|
| Q |
218 |
--cagatattggaatggtacctgtgattctactgtttgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttccttcaaac |
315 |
Q |
| |
|
|||| ||||||| |||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| ||||||||| |
|
|
| T |
37532207 |
taaagattgtggaatgctacctgtgattccattgtttgaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaac |
37532306 |
T |
|
| Q |
316 |
atgttatttgataaatcaatagttgtaaaagtagtcaatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcattatagtaat |
415 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
37532307 |
atgttatttgataaatcaatagttgtgaaagtagtcaatatctttgttagctccatagaaaaacctttcattgtgaccaccacagaatcattatagtaat |
37532406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 18 - 415
Target Start/End: Original strand, 37593111 - 37593510
Alignment:
| Q |
18 |
aatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaagat |
117 |
Q |
| |
|
||||||||||||||||||||||||||| | |||| |||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||| | |
|
|
| T |
37593111 |
aatccacacaacattgtatttccttcaaaagaatcatttccaaatgtattaaactgttgacctttaggtatgattccctcaaggtggttttgtgaaaggt |
37593210 |
T |
|
| Q |
118 |
tcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaaccaccccaaatgtctcaatttact |
217 |
Q |
| |
|
| |||| ||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||| | |||||||||||||||| |||||| |||||| | ||| |
|
|
| T |
37593211 |
ttaagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttcaattggttgcatgagaggtccaaccactccaaatttctcaaatgact |
37593310 |
T |
|
| Q |
218 |
cagatattg--gaatggtacctgtgattctactgtttgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttccttcaaac |
315 |
Q |
| |
|
|| | |||| ||||| |||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| ||||||||| |
|
|
| T |
37593311 |
caaagattgtggaatgctacctgtgattccattgtttgaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaac |
37593410 |
T |
|
| Q |
316 |
atgttatttgataaatcaatagttgtaaaagtagtcaatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcattatagtaat |
415 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||||| ||||||| || |||||||||||| | ||||||| ||||||||||||||||||| |
|
|
| T |
37593411 |
atgttatttgataaatcaatagttgtgaaagcagtcaatatccttgttagctcaatgaaaaaacctttcactgtgaccacaacagaatcattatagtaat |
37593510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 18 - 427
Target Start/End: Original strand, 37427957 - 37428370
Alignment:
| Q |
18 |
aatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaagat |
117 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
37427957 |
aatccacataacattgtattcccttcataggaatcatttccaaatgtatcaaactgttggccggtaggtatgattccctcaaggtggttttgtgagagat |
37428056 |
T |
|
| Q |
118 |
tcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtca--tt---tggttccttgagaggtccaaccaccccaaatgtctcaat |
212 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||| | ||||||||||| |||| || |||||||||||||||||||||||| |||| | ||||| |
|
|
| T |
37428057 |
tcaagaatgataggaaattcaaattttccaaagcggtgggaatctcacctgtcaaattaaatggttccttgagaggtccaaccactccaagtttctcaga |
37428156 |
T |
|
| Q |
213 |
ttactcagatattg--gaatggtacctgtgattctactgtttgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttcctt |
310 |
Q |
| |
|
||||||| | |||| ||||| |||||||||||| | ||||||||| ||||||||||||||||||| |||||||||| || ||| ||||||| ||||| |
|
|
| T |
37428157 |
ttactcaaagattgtggaatgctacctgtgattccattgtttgaaa---taagacctttgagagaattcaattctccaacgacttgaggaatttctcctt |
37428253 |
T |
|
| Q |
311 |
caaacatgttatttgataaatcaatagttgtaaaagtagtcaatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcattata |
410 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
37428254 |
caaacatgttatttgacaaatcaatagttgtgaaagttgtcaatatccttgttagctccatagaaaaacctttcactatgaccaccacagaatcattata |
37428353 |
T |
|
| Q |
411 |
gtaattgaccttgccca |
427 |
Q |
| |
|
||||||| |||| |||| |
|
|
| T |
37428354 |
gtaattggccttaccca |
37428370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 416
Target Start/End: Complemental strand, 37394139 - 37393739
Alignment:
| Q |
18 |
aatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaagat |
117 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||| |||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
37394139 |
aatccacacaacattgtattcccttcataagaatcatttccaaatgtatcaaattgttgacctgtaggtatgactccctcaaggtggttttgtgaaaggt |
37394040 |
T |
|
| Q |
118 |
tcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaaccaccccaaatgtctcaatttact |
217 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||| | |||| |||||| | ||| |
|
|
| T |
37394039 |
ttaagaatgagaggaaattcaaatttgtcaaagccacgggaatctcacccttcaattggttccttgagaggtccaaccactctaaatttctcaaatgact |
37393940 |
T |
|
| Q |
218 |
--cagatattggaatggtacctgtgattctactgtttgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttccttcaaac |
315 |
Q |
| |
|
|||| ||||||||| |||||||||| | ||||||| |||||||| |||||||||||||||||||||||||||| || | ||||| ||| |||||| |
|
|
| T |
37393939 |
taaagattgtggaatggttcctgtgattccattgtttgagaggttaaggcctttgagagaatttaattctccaatgacttctgaaatttctccatcaaac |
37393840 |
T |
|
| Q |
316 |
atgttatttgataaatcaatagttgtaaaagtagtcaatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcattatagtaat |
415 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| ||| || |||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
37393839 |
ttgttatttgataaatcaatagttgtaaaagtagtcaatatcctcgttaactctatggaaagacctttcattatgatcaccacagaatcattatagtaat |
37393740 |
T |
|
| Q |
416 |
t |
416 |
Q |
| |
|
| |
|
|
| T |
37393739 |
t |
37393739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 18 - 415
Target Start/End: Original strand, 37638653 - 37639052
Alignment:
| Q |
18 |
aatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaagat |
117 |
Q |
| |
|
||||||||||||||||||||||||||| | |||| |||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||||||| | |
|
|
| T |
37638653 |
aatccacacaacattgtatttccttcaaaagaatcatttccaaatgtattaaactgttgacctttaggtatgattccctcaagatggttttgtgaaaggt |
37638752 |
T |
|
| Q |
118 |
tcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaaccaccccaaatgtctcaatttact |
217 |
Q |
| |
|
| |||| ||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||| | |||||||||||||||| |||||| |||||| | ||| |
|
|
| T |
37638753 |
ttaagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttcaattggttgcatgagaggtccaaccactccaaatttctcaaatgact |
37638852 |
T |
|
| Q |
218 |
cagatattg--gaatggtacctgtgattctactgtttgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttccttcaaac |
315 |
Q |
| |
|
|| | |||| ||||| ||||| |||||| | |||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| ||||||||| |
|
|
| T |
37638853 |
caaagattgtggaatgctacctatgattccattgtttgaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaac |
37638952 |
T |
|
| Q |
316 |
atgttatttgataaatcaatagttgtaaaagtagtcaatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcattatagtaat |
415 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| || |||||||||| |||||||||||||| ||||||| ||||||||||| ||||||| |
|
|
| T |
37638953 |
atgttatttgataaatcaatagttgtgaaagtagtcaatatctttgttagctccatgaaaaaacctttcattgtgaccacaacagaatcattgtagtaat |
37639052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 17 - 417
Target Start/End: Complemental strand, 37383580 - 37383178
Alignment:
| Q |
17 |
aaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaaga |
116 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37383580 |
aaatccacataacattgtatttccttcaaaggaatcatttccaaatgtaccaaactgttgacctgtaggtatgattccctcaaggtggttttgtgaaaga |
37383481 |
T |
|
| Q |
117 |
ttcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaaccaccccaaatgtctcaatttac |
216 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||| | ||||||||||||| ||| |||||||||||||||||| |||||| | | || |||||| ||| |
|
|
| T |
37383480 |
ttcaagaaagagagaaaattcaaatttgtcaaagccaaaggaatctcacccttcaattggttccttgagaggtctaaccactctagatttctcaaactac |
37383381 |
T |
|
| Q |
217 |
tcagatatt--ggaatggtacctgtgattctactgtttgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttccttcaaa |
314 |
Q |
| |
|
||| | | | ||||| |||||||||||| || |||||||||||||||| |||||||||||| | |||||||||| || ||| ||||||| ||||||||| |
|
|
| T |
37383380 |
tcaaagaataaggaattgtacctgtgattttattgtttgaaaggttaaggcctttgagagaaatcaattctccaaagacttgtggaatttctccttcaaa |
37383281 |
T |
|
| Q |
315 |
catgttatttgataaatcaatagttgtaaaagtagtcaatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcattatagtaa |
414 |
Q |
| |
|
||||||||||||||||||||||||||| || || ||||||||| || ||||||||||||||| ||||| | || ||||||||||||||||||||||||| |
|
|
| T |
37383280 |
catgttatttgataaatcaatagttgtgaacgtggtcaatatctttgttagctccatagaaagtccttttactacgaccaccacagaatcattatagtaa |
37383181 |
T |
|
| Q |
415 |
ttg |
417 |
Q |
| |
|
||| |
|
|
| T |
37383180 |
ttg |
37383178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 17 - 415
Target Start/End: Original strand, 37822810 - 37823210
Alignment:
| Q |
17 |
aaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaaga |
116 |
Q |
| |
|
||||||||| |||||||||||||||||| | |||| |||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
37822810 |
aaatccacataacattgtatttccttcaaaagaatcatttccaaatgtattaaactgttgacctttaggtatgattccctcaagatggttttgtgaaagg |
37822909 |
T |
|
| Q |
117 |
ttcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaaccaccccaaatgtctcaatttac |
216 |
Q |
| |
|
|| |||| ||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||| | |||||||||||||||| |||||| |||||| | || |
|
|
| T |
37822910 |
tttaagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttcaattggttgcatgagaggtccaaccactccaaatttctcaaatgac |
37823009 |
T |
|
| Q |
217 |
tcagatattg--gaatggtacctgtgattctactgtttgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttccttcaaa |
314 |
Q |
| |
|
||| | |||| ||||| |||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| |||||||| |
|
|
| T |
37823010 |
tcaaagattgtggaatgctacctgtgattccattgtttgaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaa |
37823109 |
T |
|
| Q |
315 |
catgttatttgataaatcaatagttgtaaaagtagtcaatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcattatagtaa |
414 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||| |||||||||||| | ||||||| ||||||||||| |||||| |
|
|
| T |
37823110 |
catgttatttgataaatcaatagttgtgaaagcagtcaatatccttgttagctccatgaaaaaacctttcactgtgaccacaacagaatcattgtagtaa |
37823209 |
T |
|
| Q |
415 |
t |
415 |
Q |
| |
|
| |
|
|
| T |
37823210 |
t |
37823210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 414
Target Start/End: Original strand, 37710413 - 37710812
Alignment:
| Q |
17 |
aaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaaga |
116 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||| |||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
37710413 |
aaatccacacaacattgtatttccttcaaaagaatcatttccaaatgtattaaactgttgacctttaggtatgattccctcaagatggttttgtgaaagg |
37710512 |
T |
|
| Q |
117 |
ttcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaaccaccccaaatgtctcaatttac |
216 |
Q |
| |
|
|| |||| ||||||||| ||||||||||||||||| | ||||||||||||| ||| |||||| | |||||||||||||||| |||||| |||||| | || |
|
|
| T |
37710513 |
tttaagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttcaattggttgcatgagaggtccaaccactccaaatttctcaaatgac |
37710612 |
T |
|
| Q |
217 |
tc--agatattggaatggtacctgtgattctactgtttgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttccttcaaa |
314 |
Q |
| |
|
|| |||| ||||||| ||| |||||||| | |||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| |||||||| |
|
|
| T |
37710613 |
tcaaagattgtggaatgctacttgtgattccattgtttgaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaa |
37710712 |
T |
|
| Q |
315 |
catgttatttgataaatcaatagttgtaaaagtagtcaatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcattatagtaa |
414 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| || |||||||||||| | ||||||| || |||||||| |||||| |
|
|
| T |
37710713 |
catgttatttgataaatcaatagttgtgaaagcagtcaatatccttgttagctcaatgaaaaaacctttcactgtgaccacaacggaatcattgtagtaa |
37710812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 18 - 415
Target Start/End: Complemental strand, 37402251 - 37401852
Alignment:
| Q |
18 |
aatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaagat |
117 |
Q |
| |
|
||||||||||||||||||||||||||| | |||| |||| ||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||||||| | |
|
|
| T |
37402251 |
aatccacacaacattgtatttccttcaaaagaatcattttcaaatgtattaaactgttgacctttaggtatgattccctcaagatggttttgtgaaaggt |
37402152 |
T |
|
| Q |
118 |
tcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaaccaccccaaatgtctcaatttact |
217 |
Q |
| |
|
| |||| ||||||||| ||||||||||||||||| ||||||||||||||||| |||||| | |||||||||||||||| |||||| |||||| | ||| |
|
|
| T |
37402151 |
ttaagactgagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgact |
37402052 |
T |
|
| Q |
218 |
c--agatattggaatggtacctgtgattctactgtttgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttccttcaaac |
315 |
Q |
| |
|
| |||| ||||||| |||||||||||| | | |||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||| ||||||||| |
|
|
| T |
37402051 |
caaagattgtggaatgctacctgtgattccattatttgaaagattaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaac |
37401952 |
T |
|
| Q |
316 |
atgttatttgataaatcaatagttgtaaaagtagtcaatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcattatagtaat |
415 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||||| ||||||| || |||||||||||| | ||||||| ||||||||||| ||||||| |
|
|
| T |
37401951 |
atgttatttgataaatcaatagttgtgaaagcagtcaatatccttgttagctcaatgaaaaaacctttcactgtgaccacaacagaatcattgtagtaat |
37401852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 18 - 415
Target Start/End: Original strand, 37695502 - 37695901
Alignment:
| Q |
18 |
aatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaagat |
117 |
Q |
| |
|
|||||||| ||||| ||||| ||||||||||||| ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||||||||||||| | |
|
|
| T |
37695502 |
aatccacataacatagtattcccttcataggaatcatttccaaacgtattaaactgttgacctttaggtatgattccctcaaggtggttttgtgaaagtt |
37695601 |
T |
|
| Q |
118 |
tcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaaccaccccaaatgtctcaatttact |
217 |
Q |
| |
|
| |||| ||||||||| ||||||||||||||||| | ||||||||| ||||||| |||||| | |||||||||||||||| |||| | |||||| | || |
|
|
| T |
37695602 |
ttaagactgagaggaagttcaaatttgtcaaagccacaggaatctctcccgtcaattggttacatgagaggtccaaccactccaattttctcaaatgacc |
37695701 |
T |
|
| Q |
218 |
cagatattg--gaatggtacctgtgattctactgtttgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttccttcaaac |
315 |
Q |
| |
|
|| | |||| |||| |||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| ||||||||| |
|
|
| T |
37695702 |
caaagattgtggaatactacctgtgattccattgtttgaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaac |
37695801 |
T |
|
| Q |
316 |
atgttatttgataaatcaatagttgtaaaagtagtcaatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcattatagtaat |
415 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||||| ||||||| || |||||||||||| | ||||||| ||||||||||||||||||| |
|
|
| T |
37695802 |
atgttatttgataaatcaatagttgtgaaagcagtcaatatccttgttagctcaatgaaaaaacctttcactgtgaccacaacagaatcattatagtaat |
37695901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 19 - 277
Target Start/End: Original strand, 37439978 - 37440238
Alignment:
| Q |
19 |
atccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgtaggtatgattccctcaaggtggttttgtgaaagatt |
118 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||| |||| |||||||||||||||| |||||||||||||||| || |
|
|
| T |
37439978 |
atccacataacattgtattcccttcataggaatcatttccaaatgtaccaaactgttgacctgcaggtatgattccctcatggtggttttgtgaaaggtt |
37440077 |
T |
|
| Q |
119 |
caagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttgagaggtccaaccaccccaaatgtctcaatttactc |
218 |
Q |
| |
|
|||| ||||||||||||||||||||||||| | ||||| ||||| |||| |||||| |||||||||||| ||||| | |||| ||||||||||||| |
|
|
| T |
37440078 |
taagacagagaggaaattcaaatttgtcaaagtcacgggaatttcaccggtcaattggtttcttgagaggtccgaccactctaaatttctcaatttactc |
37440177 |
T |
|
| Q |
219 |
--agatattggaatggtacctgtgattctactgtttgaaaggttaagacctttgagagaat |
277 |
Q |
| |
|
|||| ||||||||||| | |||||| | | ||| | |||||||| ||||| ||||||| |
|
|
| T |
37440178 |
aaagattgtggaatggtacttttgattccattttttaagaggttaaggcctttaagagaat |
37440238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 434 - 489
Target Start/End: Original strand, 1535163 - 1535218
Alignment:
| Q |
434 |
aaatatattttcaataccaatcaattcacctgaattaaattaaatctaaatcttta |
489 |
Q |
| |
|
||||||||||||| || ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1535163 |
aaatatattttcagaacaaatcaattcaccttaattaaattaaatctaaatcttta |
1535218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 452 - 489
Target Start/End: Original strand, 28373783 - 28373820
Alignment:
| Q |
452 |
aatcaattcacctgaattaaattaaatctaaatcttta |
489 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28373783 |
aatcaattcaccttaattaaattaaatctaaatcttta |
28373820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 406
Target Start/End: Original strand, 26450832 - 26450986
Alignment:
| Q |
252 |
tgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttccttcaaacatgttatttgataaatcaatagttgtaaaagtagtc |
351 |
Q |
| |
|
|||||||||||| ||| |||| || || || |||||||||| ||||| | ||||||||| | || ||||||||||||| |||||| ||||||||| |
|
|
| T |
26450832 |
tgaaaggttaagtcctatgagtgacttcaactctccaatgatcgttggaatctctccttcaaatttattgtttgataaatcaagagttgtgaaagtagtc |
26450931 |
T |
|
| Q |
352 |
aatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcat |
406 |
Q |
| |
|
|| ||||| | |||||| | | || ||||| ||| ||||||| |||||||||| |
|
|
| T |
26450932 |
aagatcctctctagctctaaatcgaacccttttattgtgaccacaacagaatcat |
26450986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 368
Target Start/End: Original strand, 26437463 - 26437579
Alignment:
| Q |
252 |
tgaaaggttaagacctttgagagaatttaattctccaatgaattggggaatttttccttcaaacatgttatttgataaatcaatagttgtaaaagtagtc |
351 |
Q |
| |
|
|||||| ||||| ||| |||| || || || |||||||||| | ||||| | ||||||||| | || ||||||||||||| |||||| ||||||||| |
|
|
| T |
26437463 |
tgaaagattaagtcctatgagtgacttcaactctccaatgattattggaatctctccttcaaatttattctttgataaatcaagagttgtgaaagtagtc |
26437562 |
T |
|
| Q |
352 |
aatatcctttttagctc |
368 |
Q |
| |
|
|| ||||| | |||||| |
|
|
| T |
26437563 |
aagatcctctctagctc |
26437579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 351 - 416
Target Start/End: Original strand, 14552605 - 14552670
Alignment:
| Q |
351 |
caatatcctttttagctccatagaaaaacctttcattatgaccaccacagaatcattatagtaatt |
416 |
Q |
| |
|
|||||||||| | || |||||||||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14552605 |
caatatccttgtaagatccatagaaagacctttcattacgaccaccacagaatcattatagtaatt |
14552670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 44; Significance: 8e-16; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 434 - 489
Target Start/End: Complemental strand, 44657130 - 44657075
Alignment:
| Q |
434 |
aaatatattttcaataccaatcaattcacctgaattaaattaaatctaaatcttta |
489 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44657130 |
aaatatattttcaggacaaatcaattcacctgaattaaattaaatctaaatcttta |
44657075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 452 - 489
Target Start/End: Original strand, 574201 - 574238
Alignment:
| Q |
452 |
aatcaattcacctgaattaaattaaatctaaatcttta |
489 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
574201 |
aatcaattcaccttaattaaattaaatctaaatcttta |
574238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 452 - 489
Target Start/End: Complemental strand, 25495931 - 25495894
Alignment:
| Q |
452 |
aatcaattcacctgaattaaattaaatctaaatcttta |
489 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
25495931 |
aatcaattcaccttaattaaattaaatctaaatcttta |
25495894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 452 - 489
Target Start/End: Complemental strand, 32145003 - 32144966
Alignment:
| Q |
452 |
aatcaattcacctgaattaaattaaatctaaatcttta |
489 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
32145003 |
aatcaattcaccttaattaaattaaatctaaatcttta |
32144966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 434 - 489
Target Start/End: Complemental strand, 1521574 - 1521519
Alignment:
| Q |
434 |
aaatatattttcaataccaatcaattcacctgaattaaattaaatctaaatcttta |
489 |
Q |
| |
|
||||||||||||| || ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1521574 |
aaatatattttcagaacaaatcaattcaccttaattaaattaaatctaaatcttta |
1521519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 452 - 489
Target Start/End: Complemental strand, 43773593 - 43773556
Alignment:
| Q |
452 |
aatcaattcacctgaattaaattaaatctaaatcttta |
489 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
43773593 |
aatcaattcaccttaattaaattaaatctaaatcttta |
43773556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 434 - 489
Target Start/End: Complemental strand, 6927665 - 6927610
Alignment:
| Q |
434 |
aaatatattttcaataccaatcaattcacctgaattaaattaaatctaaatcttta |
489 |
Q |
| |
|
||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
6927665 |
aaatatattttcagaacaaattaattcacctgaattaaattaaatttaaatcttta |
6927610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 452 - 489
Target Start/End: Original strand, 349227 - 349264
Alignment:
| Q |
452 |
aatcaattcacctgaattaaattaaatctaaatcttta |
489 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
349227 |
aatcaattcaccttaattaaattaaatctaaatcttta |
349264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 452 - 489
Target Start/End: Original strand, 26709644 - 26709681
Alignment:
| Q |
452 |
aatcaattcacctgaattaaattaaatctaaatcttta |
489 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
26709644 |
aatcaattcaccttaattaaattaaatctaaatcttta |
26709681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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