View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7752_low_8 (Length: 406)

Name: NF7752_low_8
Description: NF7752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7752_low_8
NF7752_low_8
[»] chr4 (25 HSPs)
chr4 (16-288)||(33613552-33613835)
chr4 (214-288)||(55790924-55790998)
chr4 (214-288)||(736435-736509)
chr4 (214-284)||(3358583-3358653)
chr4 (214-284)||(3368249-3368319)
chr4 (214-284)||(3396228-3396298)
chr4 (214-288)||(10219588-10219662)
chr4 (214-284)||(40815606-40815676)
chr4 (217-284)||(47877713-47877779)
chr4 (214-284)||(5063554-5063624)
chr4 (214-287)||(22140040-22140113)
chr4 (214-287)||(22151954-22152027)
chr4 (214-284)||(49891785-49891855)
chr4 (214-283)||(8816089-8816157)
chr4 (214-268)||(739781-739835)
chr4 (214-268)||(745952-746006)
chr4 (214-261)||(11599723-11599770)
chr4 (130-215)||(10219449-10219538)
chr4 (214-282)||(15080681-15080748)
chr4 (214-282)||(19736649-19736716)
chr4 (214-282)||(20555269-20555336)
chr4 (214-282)||(20561913-20561980)
chr4 (214-253)||(3381092-3381131)
chr4 (221-287)||(20840851-20840917)
chr4 (130-172)||(40815470-40815514)
[»] scaffold0051 (1 HSPs)
scaffold0051 (214-288)||(56813-56887)
[»] chr7 (34 HSPs)
chr7 (214-288)||(7341942-7342016)
chr7 (214-284)||(12585725-12585795)
chr7 (214-284)||(12595499-12595569)
chr7 (214-284)||(16263757-16263827)
chr7 (214-284)||(16280450-16280520)
chr7 (214-284)||(16294652-16294722)
chr7 (214-284)||(17465088-17465158)
chr7 (214-284)||(17588056-17588126)
chr7 (214-284)||(26125545-26125615)
chr7 (214-284)||(37287985-37288055)
chr7 (214-284)||(3422364-3422434)
chr7 (214-284)||(3431520-3431590)
chr7 (214-288)||(4889211-4889285)
chr7 (214-284)||(16271423-16271493)
chr7 (226-288)||(23445687-23445749)
chr7 (219-284)||(46298821-46298886)
chr7 (219-283)||(355799-355863)
chr7 (214-284)||(791936-792006)
chr7 (214-268)||(12606041-12606095)
chr7 (226-287)||(12392492-12392553)
chr7 (130-210)||(791799-791881)
chr7 (130-210)||(805634-805716)
chr7 (130-210)||(17465213-17465295)
chr7 (130-210)||(17587919-17588001)
chr7 (130-210)||(37288110-37288192)
chr7 (130-172)||(7341804-7341848)
chr7 (219-287)||(30363253-30363321)
chr7 (219-287)||(30377318-30377386)
chr7 (214-253)||(4831041-4831080)
chr7 (221-287)||(12979821-12979887)
chr7 (214-253)||(18777695-18777734)
chr7 (214-253)||(43907591-43907630)
chr7 (214-253)||(44417887-44417926)
chr7 (219-287)||(20029230-20029298)
[»] chr6 (26 HSPs)
chr6 (214-288)||(27643751-27643825)
chr6 (214-284)||(20073363-20073433)
chr6 (214-284)||(22402924-22402994)
chr6 (214-284)||(35025773-35025843)
chr6 (214-287)||(34270838-34270911)
chr6 (214-284)||(1628171-1628241)
chr6 (214-284)||(18869525-18869595)
chr6 (214-284)||(26844625-26844694)
chr6 (130-210)||(33253796-33253878)
chr6 (214-284)||(22597830-22597900)
chr6 (214-280)||(2408638-2408704)
chr6 (214-284)||(33253671-33253741)
chr6 (219-284)||(2890492-2890557)
chr6 (130-210)||(22403049-22403131)
chr6 (130-210)||(34270966-34271048)
chr6 (214-284)||(12393575-12393645)
chr6 (130-210)||(18869650-18869734)
chr6 (214-282)||(19715013-19715080)
chr6 (214-282)||(28701538-28701605)
chr6 (214-253)||(18229216-18229255)
chr6 (221-287)||(18910438-18910504)
chr6 (214-253)||(21748275-21748314)
chr6 (214-253)||(22763507-22763546)
chr6 (214-284)||(12664001-12664070)
chr6 (221-284)||(9129954-9130017)
chr6 (221-284)||(9143790-9143853)
[»] chr5 (19 HSPs)
chr5 (214-288)||(21746564-21746638)
chr5 (214-284)||(24060527-24060597)
chr5 (214-284)||(34461418-34461488)
chr5 (214-284)||(34475675-34475745)
chr5 (214-284)||(37577994-37578064)
chr5 (214-284)||(37587104-37587174)
chr5 (214-283)||(30250567-30250636)
chr5 (214-284)||(36433883-36433953)
chr5 (214-261)||(10059183-10059230)
chr5 (214-284)||(38226603-38226672)
chr5 (130-172)||(21746425-21746469)
chr5 (214-253)||(20638498-20638537)
chr5 (214-253)||(29894490-29894529)
chr5 (214-253)||(29903212-29903251)
chr5 (214-253)||(36449628-36449667)
chr5 (214-253)||(36456016-36456055)
chr5 (130-210)||(24060391-24060472)
chr5 (130-172)||(34461582-34461626)
chr5 (130-172)||(34475839-34475883)
[»] chr1 (14 HSPs)
chr1 (214-288)||(49934425-49934499)
chr1 (214-284)||(18702871-18702941)
chr1 (214-288)||(2686820-2686895)
chr1 (214-284)||(27171159-27171229)
chr1 (214-287)||(20312088-20312161)
chr1 (214-284)||(18099653-18099723)
chr1 (214-284)||(44831201-44831271)
chr1 (214-282)||(20430711-20430778)
chr1 (219-287)||(20640356-20640424)
chr1 (214-253)||(2334011-2334050)
chr1 (214-253)||(9009785-9009824)
chr1 (214-253)||(35077125-35077164)
chr1 (214-253)||(44319652-44319691)
chr1 (130-172)||(27167602-27167646)
[»] chr2 (20 HSPs)
chr2 (214-288)||(21767875-21767950)
chr2 (214-284)||(35082280-35082350)
chr2 (214-288)||(21749147-21749222)
chr2 (214-288)||(21753724-21753799)
chr2 (214-284)||(28459611-28459681)
chr2 (214-284)||(24868265-24868335)
chr2 (214-284)||(40389322-40389391)
chr2 (214-284)||(40385732-40385801)
chr2 (214-287)||(18501566-18501638)
chr2 (214-287)||(27342099-27342171)
chr2 (214-287)||(27343209-27343281)
chr2 (214-261)||(15812192-15812239)
chr2 (214-253)||(5869798-5869837)
chr2 (214-253)||(5872909-5872948)
chr2 (214-253)||(20273657-20273696)
chr2 (214-253)||(29586550-29586589)
chr2 (130-172)||(21749010-21749054)
chr2 (130-172)||(21753587-21753631)
chr2 (130-172)||(21767738-21767782)
chr2 (130-158)||(24868121-24868149)
[»] scaffold0799 (1 HSPs)
scaffold0799 (214-284)||(4511-4581)
[»] scaffold0361 (1 HSPs)
scaffold0361 (214-284)||(2381-2451)
[»] scaffold0278 (2 HSPs)
scaffold0278 (214-288)||(14114-14188)
scaffold0278 (214-288)||(17448-17522)
[»] scaffold0125 (2 HSPs)
scaffold0125 (214-288)||(10255-10329)
scaffold0125 (214-288)||(17177-17251)
[»] scaffold0014 (3 HSPs)
scaffold0014 (214-284)||(170201-170271)
scaffold0014 (214-284)||(186705-186775)
scaffold0014 (130-215)||(186568-186655)
[»] chr8 (23 HSPs)
chr8 (214-284)||(6665086-6665156)
chr8 (214-284)||(6672750-6672820)
chr8 (214-288)||(12846592-12846666)
chr8 (214-284)||(25706769-25706839)
chr8 (214-284)||(25373092-25373162)
chr8 (214-287)||(16738654-16738727)
chr8 (214-284)||(25402260-25402330)
chr8 (214-287)||(25644772-25644845)
chr8 (214-284)||(20026238-20026308)
chr8 (130-215)||(6665206-6665293)
chr8 (130-215)||(6672870-6672957)
chr8 (226-287)||(23640420-23640481)
chr8 (214-253)||(32008099-32008138)
chr8 (130-210)||(22105704-22105786)
chr8 (240-284)||(22105824-22105868)
chr8 (214-253)||(14890036-14890075)
chr8 (214-253)||(20735124-20735163)
chr8 (214-253)||(20743682-20743721)
chr8 (214-253)||(22155633-22155672)
chr8 (214-253)||(25857914-25857953)
chr8 (214-253)||(32001142-32001181)
chr8 (134-210)||(12846721-12846799)
chr8 (214-284)||(13387248-13387317)
[»] chr3 (37 HSPs)
chr3 (214-284)||(3676869-3676939)
chr3 (214-284)||(3686004-3686074)
chr3 (214-284)||(12702881-12702951)
chr3 (214-284)||(16469344-16469414)
chr3 (214-284)||(41441535-41441605)
chr3 (214-284)||(6956733-6956803)
chr3 (214-284)||(6971013-6971083)
chr3 (214-284)||(14738074-14738144)
chr3 (214-284)||(15985433-15985503)
chr3 (214-284)||(17216832-17216902)
chr3 (214-284)||(27874098-27874168)
chr3 (218-284)||(30013446-30013512)
chr3 (218-284)||(30022872-30022938)
chr3 (214-284)||(20435871-20435942)
chr3 (214-284)||(20449797-20449868)
chr3 (214-284)||(41433037-41433108)
chr3 (219-283)||(2227031-2227095)
chr3 (214-284)||(12997837-12997906)
chr3 (226-288)||(16016155-16016217)
chr3 (214-284)||(47730483-47730553)
chr3 (130-215)||(6956596-6956683)
chr3 (130-215)||(6970876-6970963)
chr3 (130-210)||(14737937-14738019)
chr3 (130-172)||(27874262-27874306)
chr3 (214-282)||(13104285-13104352)
chr3 (214-282)||(13110441-13110508)
chr3 (214-253)||(69534-69573)
chr3 (214-253)||(75627-75666)
chr3 (214-253)||(262717-262756)
chr3 (221-287)||(12559194-12559261)
chr3 (214-253)||(14879883-14879922)
chr3 (214-253)||(14886471-14886510)
chr3 (214-253)||(21637225-21637264)
chr3 (221-287)||(49965276-49965343)
chr3 (130-210)||(16469208-16469289)
chr3 (214-284)||(37469277-37469346)
chr3 (214-282)||(3412603-3412670)
[»] scaffold0582 (1 HSPs)
scaffold0582 (214-284)||(5984-6054)
[»] scaffold0098 (1 HSPs)
scaffold0098 (214-288)||(28856-28930)
[»] scaffold0031 (1 HSPs)
scaffold0031 (219-284)||(32418-32483)
[»] scaffold0016 (2 HSPs)
scaffold0016 (226-284)||(56564-56622)
scaffold0016 (130-172)||(56414-56458)
[»] scaffold0005 (1 HSPs)
scaffold0005 (214-284)||(299160-299229)
[»] scaffold0560 (1 HSPs)
scaffold0560 (214-287)||(10674-10747)
[»] scaffold0019 (2 HSPs)
scaffold0019 (219-278)||(12201-12260)
scaffold0019 (219-262)||(20457-20500)
[»] scaffold0974 (1 HSPs)
scaffold0974 (214-276)||(3375-3436)
[»] scaffold1699 (1 HSPs)
scaffold1699 (214-284)||(18-87)
[»] scaffold0043 (1 HSPs)
scaffold0043 (214-284)||(31959-32028)
[»] scaffold0107 (1 HSPs)
scaffold0107 (219-287)||(1042-1110)
[»] scaffold0478 (1 HSPs)
scaffold0478 (214-253)||(1171-1210)
[»] scaffold0393 (1 HSPs)
scaffold0393 (214-253)||(2866-2905)
[»] scaffold0152 (1 HSPs)
scaffold0152 (221-287)||(15614-15681)
[»] scaffold0119 (1 HSPs)
scaffold0119 (214-253)||(38850-38889)
[»] scaffold0083 (1 HSPs)
scaffold0083 (214-253)||(25113-25152)
[»] scaffold0077 (1 HSPs)
scaffold0077 (214-253)||(1682-1721)
[»] scaffold0029 (1 HSPs)
scaffold0029 (214-253)||(36172-36211)
[»] scaffold0027 (1 HSPs)
scaffold0027 (214-253)||(24948-24987)
[»] scaffold0028 (1 HSPs)
scaffold0028 (214-282)||(69261-69328)


Alignment Details
Target: chr4 (Bit Score: 150; Significance: 3e-79; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 16 - 288
Target Start/End: Original strand, 33613552 - 33613835
Alignment:
Q  16 caagaaatgcatcaagagtcaagactacttatacacaaagatattgcaaggattttggttgggataatagtcattttattccttgaatattatcgcgtca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |    
T  33613552 caagaaatgcatcaagagtcaagactacttatacacaaagatattgcaaggattttggttgagataatagtcattttattccttgaatattgtcgcgtta 33613651  T
Q  116 ttttttggag-----cgttatttgattagcgtttgactcac-tttttatctca--actgaacaa---annnnnnnaaaggggaaaaagtttcaaacaacc 204  Q
    ||||| ||||      |  |||||||||||||||||||||| ||||||| |||  |||||||||            |||||||||||||| |||||||||    
T  33613652 tttttcggaggtcaatgccatttgattagcgtttgactcacttttttatttcacgactgaacaattttttttttttaaggggaaaaagttccaaacaacc 33613751  T
Q  205 cattttaaaaaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    |||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  33613752 cattttgaaaaatattcgtaatactctatgagaacctcttgattttattcaactttttgtgcttaaacttgcttgtttttgaag 33613835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 55790998 - 55790924
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  55790998 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgcttttgaag 55790924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 736435 - 736509
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  736435 aaatattcgtagtactctatgagaacctcttgattttatttaactttttgtgcttaaacttgcttgcttttgaag 736509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 3358653 - 3358583
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||    
T  3358653 aaatattcgtagtactctacgagaacctcctgattttatttaactttttgtgcttaaacttgcttgctttt 3358583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 3368319 - 3368249
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||    
T  3368319 aaatattcgtagtactctacgagaacctcctgattttatttaactttttgtgcttaaacttgcttgctttt 3368249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 3396228 - 3396298
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    |||||| |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  3396228 aaatatgcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 3396298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 10219588 - 10219662
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||| ||||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  10219588 aaatattcgtagtactctatgagtacctcttgattttatttaactttttgtgcttaaacttgcttgcttttgaag 10219662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 40815606 - 40815676
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    |||||| |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  40815606 aaatatacgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 40815676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 284
Target Start/End: Complemental strand, 47877779 - 47877713
Alignment:
Q  217 tattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    |||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  47877779 tattcgtagtactctacgagaacctcttgattttattcaac-ttttgtgcttaaacttgcttgctttt 47877713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 5063624 - 5063554
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||| | ||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||    
T  5063624 aaatattcgcagtactctacgagaatctcttgattttatttaactttttgtgcttaaacttgcttgctttt 5063554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 22140040 - 22140113
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaa 287  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||| |||||||  ||||||||||||||||||    
T  22140040 aaatattcgtagtactctacgagaacctcttgattttatttaacttcttgtgctataacttgcttgcttttgaa 22140113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 22151954 - 22152027
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaa 287  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||| |||||||  ||||||||||||||||||    
T  22151954 aaatattcgtagtactctacgagaacctcttgattttatttaacttcttgtgctataacttgcttgcttttgaa 22152027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 49891855 - 49891785
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||| |||||    
T  49891855 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgctataacttgctttctttt 49891785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 8816089 - 8816157
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttt 283  Q
    ||||||||||| ||||||||||||||||||| | |||||| || ||||||||||||||||||||||||||    
T  8816089 aaatattcgtagtactctacgagaacctcttga-tttatttaattttttgtgcttaaacttgcttgcttt 8816157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 739835 - 739781
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgctt 268  Q
    ||||||||||| |||||||| |||||||||| |||||||| ||||||||||||||    
T  739835 aaatattcgtagtactctacaagaacctcttgattttatttaactttttgtgctt 739781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 268
Target Start/End: Original strand, 745952 - 746006
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgctt 268  Q
    ||||||||||| |||||||| |||||||||| |||||||| ||||||||||||||    
T  745952 aaatattcgtagtactctacaagaacctcttgattttatttaactttttgtgctt 746006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 11599723 - 11599770
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttt 261  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||||    
T  11599723 aaatattcgtagtactctacgagaacctcttgattttatttaactttt 11599770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 10219449 - 10219538
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaac--aaannnnnnnaaaggggaaaaagtttcaaacaacccattttaaaaa 215  Q
    ||||||||||| |||||||||||||||||||||  |||||||  |||       ||||||||||||||||||||| ||||||||| ||||    
T  10219449 atttgattagcttttgactcactttttatctcacgactgaacaaaaaattttttaaaggggaaaaagtttcaaaccacccattttgaaaa 10219538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 282
Target Start/End: Original strand, 15080681 - 15080748
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctt 282  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||  ||||||  |||||||||||||    
T  15080681 aaatattcgtagtactctacgagaacctcttgattttatttaa-ttaatgtgctataacttgcttgctt 15080748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 282
Target Start/End: Original strand, 19736649 - 19736716
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctt 282  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||  ||||||  |||||||||||||    
T  19736649 aaatattcgtagtactctacgagaacctcttgattttatttaa-ttaatgtgctataacttgcttgctt 19736716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 20555336 - 20555269
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctt 282  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||  ||||||  |||||||||||||    
T  20555336 aaatattcgtagtactctacgagaacctcttgattttatttaa-ttaatgtgctataacttgcttgctt 20555269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 20561980 - 20561913
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctt 282  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||  ||||||  |||||||||||||    
T  20561980 aaatattcgtagtactctacgagaacctcttgattttatttaa-ttaatgtgctataacttgcttgctt 20561913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 3381092 - 3381131
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  3381092 aaatattcgtagtactctacgagaacctcttgattttatt 3381131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 20840851 - 20840917
Alignment:
Q  221 cgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaa 287  Q
    |||| ||||||||| ||||||||| |||||||| || ||  ||||||  ||||||||||||||||||    
T  20840851 cgtagtactctacgggaacctcttgattttatttaatttaatgtgctacaacttgcttgcttttgaa 20840917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 40815470 - 40815514
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaa 172  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||    
T  40815470 atttgattagcgtttgactcagtttttatctcacgactgaacaaa 40815514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 56813 - 56887
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  56813 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgcttttgaag 56887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 7341942 - 7342016
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  7341942 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgcttttgaag 7342016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 12585795 - 12585725
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  12585795 aaatattcgtaatactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 12585725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 12595569 - 12595499
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    |||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  12595569 aaatattcgtaatactctacaagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 12595499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 16263757 - 16263827
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  16263757 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 16263827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 16280450 - 16280520
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  16280450 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 16280520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 16294652 - 16294722
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  16294652 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 16294722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 17465158 - 17465088
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  17465158 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 17465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 17588056 - 17588126
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  17588056 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 17588126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 26125615 - 26125545
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  26125615 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 26125545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 37288055 - 37287985
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  37288055 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 37287985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 3422364 - 3422434
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||    
T  3422364 aaatattcgtagtactctacgagaacctcctgattttatttaactttttgtgcttaaacttgcttgctttt 3422434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 3431520 - 3431590
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||    
T  3431520 aaatattcgtagtactctacgagaacctcctgattttatttaactttttgtgcttaaacttgcttgctttt 3431590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 4889211 - 4889285
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||| || |||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||    
T  4889211 aaatattcgtagtattctacgagaacctcttgattttatttaaatttttgtgcttaaacttgcttgcttttgaag 4889285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 16271423 - 16271493
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  16271423 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaactttcttgctttt 16271493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 23445749 - 23445687
Alignment:
Q  226 tactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  23445749 tactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgcttttgaag 23445687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 46298821 - 46298886
Alignment:
Q  219 ttcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    |||||| ||||||||||||||||||| |||||| | ||||||||||||||||||||| ||||||||    
T  46298821 ttcgtagtactctacgagaacctcttgattttaattaactttttgtgcttaaacttgtttgctttt 46298886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 355863 - 355799
Alignment:
Q  219 ttcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttt 283  Q
    |||||| ||||||||| |||| |||| |||||||| |||||||||||||||||||||||||||||    
T  355863 ttcgtagtactctacgtgaacttcttgattttatttaactttttgtgcttaaacttgcttgcttt 355799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 791936 - 792006
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||| || ||  |||||||||||||||    
T  791936 aaatattcgtagtactctacgagaacctcttgattttatttaacttttggtactataacttgcttgctttt 792006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 268
Target Start/End: Original strand, 12606041 - 12606095
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgctt 268  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  12606041 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgctt 12606095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 12392492 - 12392553
Alignment:
Q  226 tactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaa 287  Q
    ||||||||||||||||||| |||||||||||||||||||| |  ||||| ||| ||||||||    
T  12392492 tactctacgagaacctcttgattttattcaactttttgtgttataacttactttcttttgaa 12392553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 791799 - 791881
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccatttt 210  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||        |||||||||||||| ||||| |||||||||    
T  791799 atttgattagcttttgactcactttttatctcacgactgaacaaattttttttaaggggaaaaagttccaaaccacccatttt 791881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 805634 - 805716
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccatttt 210  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||        |||||||||||||| ||||| |||||||||    
T  805634 atttgattagcttttgactcactttttatctcacgactgaacaaattttttttaaggggaaaaagttccaaaccacccatttt 805716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 17465295 - 17465213
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccatttt 210  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||        |||||||||||||| ||||| |||||||||    
T  17465295 atttgattagcttttgactcactttttatctcacgactgaacaaattttttttaaggggaaaaagttccaaaccacccatttt 17465213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 17587919 - 17588001
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccatttt 210  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||        |||||||||||||| ||||| |||||||||    
T  17587919 atttgattagcttttgactcactttttatctcacgactgaacaaattttttttaaggggaaaaagttccaaaccacccatttt 17588001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 37288192 - 37288110
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccatttt 210  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||        |||||||||||||| ||||| |||||||||    
T  37288192 atttgattagcttttgactcactttttatctcacgactgaacaaattttttttaaggggaaaaagttccaaaccacccatttt 37288110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 7341804 - 7341848
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaa 172  Q
    |||||||||||||||||||||||||||||||||  ||||||||||    
T  7341804 atttgattagcgtttgactcactttttatctcacgactgaacaaa 7341848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 30363253 - 30363321
Alignment:
Q  219 ttcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaa 287  Q
    |||||| ||||||||||||||||||| |||||||| || |   ||||||  ||||||||||||||||||    
T  30363253 ttcgtagtactctacgagaacctcttgattttatttaattcaatgtgctataacttgcttgcttttgaa 30363321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 30377318 - 30377386
Alignment:
Q  219 ttcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaa 287  Q
    |||||| ||||||||||||||||||| |||||||| || |   ||||||  ||||||||||||||||||    
T  30377318 ttcgtagtactctacgagaacctcttgattttatttaattcaatgtgctataacttgcttgcttttgaa 30377386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 4831041 - 4831080
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  4831041 aaatattcgtagtactctacgagaacctcttgattttatt 4831080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 12979887 - 12979821
Alignment:
Q  221 cgtaatactctacgagaacctcttaattttattcaactttttgtgct-taaacttgcttgcttttgaa 287  Q
    |||| |||| |||| ||||||||| |||||||| || |||||||||| ||||||||||||||||||||    
T  12979887 cgtagtactttacgggaacctcttgattttatttaa-tttttgtgctataaacttgcttgcttttgaa 12979821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 18777695 - 18777734
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  18777695 aaatattcgtagtactctacgagaacctcttgattttatt 18777734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 43907630 - 43907591
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  43907630 aaatattcgtagtactctacgagaacctcttgattttatt 43907591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 44417887 - 44417926
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  44417887 aaatattcgtagtactctacgagaacctcttgattttatt 44417926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 20029298 - 20029230
Alignment:
Q  219 ttcgtaatactctacgagaacctcttaattttattcaactttttgtgct-taaacttgcttgcttttgaa 287  Q
    |||||| ||||||||||||||||||| ||||||||  | |||| ||||| ||||||||||| ||||||||    
T  20029298 ttcgtagtactctacgagaacctcttgattttatt-tatttttcgtgctataaacttgcttacttttgaa 20029230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 27643825 - 27643751
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  27643825 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgcttttgaag 27643751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 20073363 - 20073433
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  20073363 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 20073433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 22402994 - 22402924
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||    
T  22402994 aaatattcgtagtactctacgagaacctcttgattttatttaacttattgtgcttaaacttgcttgctttt 22402924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 35025843 - 35025773
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  35025843 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgttttt 35025773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 34270911 - 34270838
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaa 287  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||    
T  34270911 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgctataacttgcttgcttttgaa 34270838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 1628241 - 1628171
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  1628241 aaatatttgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaatttgcttgctttt 1628171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 18869595 - 18869525
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||||||||||| ||||| |||||||||    
T  18869595 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttcaacttacttgctttt 18869525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 26844625 - 26844694
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||||||||||||    
T  26844625 aaatattcgtaatactctacgagaacctcttgattttatttaac-ttttgtgctcaaacttgcttgctttt 26844694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 33253878 - 33253796
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccatttt 210  Q
    |||||||||||||||||||||||||||||||||  ||||||||||       |||||||||||||||||||||||||||||||    
T  33253878 atttgattagcgtttgactcactttttatctcacgactgaacaaatttttttaaaggggaaaaagtttcaaacaacccatttt 33253796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 22597830 - 22597900
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||||||||||  |||||| ||||||||    
T  22597830 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgctataacttgtttgctttt 22597900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 2408638 - 2408704
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgc 280  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||| |||  |||||||||||    
T  2408638 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgcgctataacttgcttgc 2408704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 33253741 - 33253671
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||| | |||||| ||||||  |||||||||||||||    
T  33253741 aaatattcgtagtactctacgagaacctcttgattttacttaactttgtgtgctataacttgcttgctttt 33253671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 2890557 - 2890492
Alignment:
Q  219 ttcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    |||||| ||||||| |||||||| || |||||||| ||||||||||||||||||||| ||||||||    
T  2890557 ttcgtagtactctatgagaaccttttgattttatttaactttttgtgcttaaacttgtttgctttt 2890492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 22403131 - 22403049
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccatttt 210  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||        |||||||||||||| |||||||||||||||    
T  22403131 atttgattagcgtttgactcagtttttatctcacgactgaacaaattttttttaaggggaaaaagttccaaacaacccatttt 22403049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 34271048 - 34270966
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccatttt 210  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||        |||||||||||||| |||||||||||||||    
T  34271048 atttgattagcttttgactcactttttatctcacgactgaacaaattttttttaaggggaaaaagttccaaacaacccatttt 34270966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 12393645 - 12393575
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| |||| |||||||||||||| |||||||| ||  |||||| ||  |||||||||||||||    
T  12393645 aaatattcgtattactatacgagaacctcttgattttatttaaacttttgtcctataacttgcttgctttt 12393575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 18869734 - 18869650
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaa--nnnnnnnaaaggggaaaaagtttcaaacaacccatttt 210  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||         ||||||||||||||| |||||||||||||||    
T  18869734 atttgattggcgtttgactcactttttatctcacgactgaacaaatttttttttaaaggggaaaaagttccaaacaacccatttt 18869650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 19715080 - 19715013
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctt 282  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||  ||||||  |||||||||||||    
T  19715080 aaatattcgtagtactctacgagaacctcttgattttatttaa-ttaatgtgctataacttgcttgctt 19715013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 282
Target Start/End: Original strand, 28701538 - 28701605
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctt 282  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||  ||||||  |||||||||||||    
T  28701538 aaatattcgtagtactctacgagaacctcttgattttatttaa-ttaatgtgctataacttgcttgctt 28701605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 18229255 - 18229216
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  18229255 aaatattcgtagtactctacgagaacctctttattttatt 18229216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 18910504 - 18910438
Alignment:
Q  221 cgtaatactctacgagaacctcttaattttattcaactttttgtgct-taaacttgcttgcttttgaa 287  Q
    |||| ||||||||| ||||||||| |||| ||| | ||||||||||| ||||||||||||||||||||    
T  18910504 cgtagtactctacgggaacctcttgatttcattta-ctttttgtgctataaacttgcttgcttttgaa 18910438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 21748275 - 21748314
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  21748275 aaatattcgtagtactctacgagaacctctttattttatt 21748314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 22763507 - 22763546
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  22763507 aaatattcgtagtactctacgagaacctcttgattttatt 22763546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 12664070 - 12664001
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||| ||| ||||||||||||||||||| ||||||||  | |||| |||||  |||||||||||||||    
T  12664070 aaatattggtagtactctacgagaacctcttgattttatt-tatttttcgtgctataacttgcttgctttt 12664001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 284
Target Start/End: Original strand, 9129954 - 9130017
Alignment:
Q  221 cgtaatactctacgagaacctcttaattttattcaactttttgtgct-taaacttgcttgctttt 284  Q
    |||| ||||||||| |||||||||  ||||||| | ||||||||||| |||||||||||||||||    
T  9129954 cgtagtactctacgggaacctcttggttttattta-ctttttgtgctataaacttgcttgctttt 9130017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 284
Target Start/End: Original strand, 9143790 - 9143853
Alignment:
Q  221 cgtaatactctacgagaacctcttaattttattcaactttttgtgct-taaacttgcttgctttt 284  Q
    |||| ||||||||| |||||||||  ||||||| | ||||||||||| |||||||||||||||||    
T  9143790 cgtagtactctacgggaacctcttggttttattta-ctttttgtgctataaacttgcttgctttt 9143853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 21746564 - 21746638
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  21746564 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgcttttgaag 21746638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 24060527 - 24060597
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  24060527 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 24060597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 34461488 - 34461418
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  34461488 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 34461418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 34475745 - 34475675
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  34475745 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 34475675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 37578064 - 37577994
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  37578064 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 37577994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 37587174 - 37587104
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  37587174 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 37587104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 30250636 - 30250567
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttt 283  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  30250636 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgcttt 30250567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 36433953 - 36433883
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    |||||||| || ||||||||||||||||||| |||||||| ||||||| |||||  |||||||||||||||    
T  36433953 aaatattcatagtactctacgagaacctcttgattttatttaacttttggtgctacaacttgcttgctttt 36433883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 10059230 - 10059183
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttt 261  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  10059230 aaatattcgtagtactctacgagaacctcttgattctattcaactttt 10059183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 38226603 - 38226672
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| ||||||||  | |||| |||||  |||||||||||||||    
T  38226603 aaatattcgtagtactctacgagaacctcttgattttatt-tatttttcgtgctataacttgcttgctttt 38226672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 21746425 - 21746469
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaa 172  Q
    |||||||||||||||||||||||||||||||||  ||||||||||    
T  21746425 atttgattagcgtttgactcactttttatctcacgactgaacaaa 21746469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 20638498 - 20638537
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  20638498 aaatattcgtagtactctacgagaacctcttgattttatt 20638537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 29894529 - 29894490
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  29894529 aaatattcgtagtactctacgagaacctcttgattttatt 29894490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 29903251 - 29903212
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  29903251 aaatattcgtagtactctacgagaacctcttgattttatt 29903212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 36449667 - 36449628
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  36449667 aaatattcgtagtactctacgagaacctcttgattttatt 36449628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 36456055 - 36456016
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  36456055 aaatattcgtagtactctacgagaacctcttgattttatt 36456016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 24060391 - 24060472
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccatttt 210  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||        |||||||||||||| ||||| |||||||||    
T  24060391 atttgattagcttttgactcactttttatctcacgactgaacaaattttttt-aaggggaaaaagttccaaaccacccatttt 24060472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 34461626 - 34461582
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaa 172  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||    
T  34461626 atttgattagcttttgactcactttttatctcacgactgaacaaa 34461582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 34475883 - 34475839
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaa 172  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||    
T  34475883 atttgattagcttttgactcactttttatctcacgactgaacaaa 34475839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 49934499 - 49934425
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  49934499 aaatatttgtagtactctacgagaacctcttaattttatttaactttttgtgcttaaacttgcttgcttttgaag 49934425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 18702871 - 18702941
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  18702871 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 18702941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 2686895 - 2686820
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaatttt-attcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  2686895 aaatattcgtagtactctacgagaacctcttgatttttatttaactttttgtgcttaaacttgcttgcttttgaag 2686820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 27171229 - 27171159
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||| ||| ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  27171229 aaatatttgtagtactctacgagtacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 27171159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 20312088 - 20312161
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaa 287  Q
    ||||||||||| || |||||||||||||||| |||||||| ||||| |||||||  ||||||||||||||||||    
T  20312088 aaatattcgtagtagtctacgagaacctcttgattttatttaacttcttgtgctataacttgcttgcttttgaa 20312161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 18099723 - 18099653
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgct-taaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||  |||||| |||||||||||||||||    
T  18099723 aaatattcgtagtactctacgagaacctcttgattttatttaa-ttaatgtgctataaacttgcttgctttt 18099653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 44831201 - 44831271
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgct-taaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||  |||||| |||||||||||||||||    
T  44831201 aaatattcgtagtactctacgagaacctcttgattttatttaa-ttaatgtgctataaacttgcttgctttt 44831271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 20430778 - 20430711
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctt 282  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||  ||||||  |||||||||||||    
T  20430778 aaatattcgtagtactctacgagaacctcttgattttatttaa-ttaatgtgctataacttgcttgctt 20430711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 20640356 - 20640424
Alignment:
Q  219 ttcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaa 287  Q
    |||||| ||||||||| ||||||||| |||||||| || ||  ||||||  ||||||||||||||||||    
T  20640356 ttcgtagtactctacgggaacctcttgattttatttaatttaatgtgctataacttgcttgcttttgaa 20640424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 2334011 - 2334050
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  2334011 aaatattcgtagtactctacgagaacctcttgattttatt 2334050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 9009824 - 9009785
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  9009824 aaatattcgtagtactctacgagaacctcttgattttatt 9009785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 35077164 - 35077125
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  35077164 aaatattcgtagtactctacgagaacctcttgattttatt 35077125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 44319691 - 44319652
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  44319691 aaatattcgtagtactctacgagaacctcttgattttatt 44319652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 27167646 - 27167602
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaa 172  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||    
T  27167646 atttgattagcttttgactcactttttatctcacgactgaacaaa 27167602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 21767875 - 21767950
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaatttt-attcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  21767875 aaatattcgtagtactctacgagaacctcttgatttttattcaactttttgtgcttaaacttgcttgcttttgaag 21767950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 35082280 - 35082350
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  35082280 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 35082350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 21749147 - 21749222
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaatttt-attcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  21749147 aaatatttgtagtactctacgagaacctcttgatttttattcaactttttgtgcttaaatttgcttgcttttgaag 21749222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 21753724 - 21753799
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaatttt-attcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  21753724 aaatatttgtagtactctacgagaacctcttgatttttattcaactttttgtgcttaaatttgcttgcttttgaag 21753799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 28459611 - 28459681
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| |||||||||    
T  28459611 aaatattcgtagtactctacgataacctcttgattttatttaactttttgtgcttaaacttacttgctttt 28459681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 24868265 - 24868335
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    |||||||||||||||||||||| |||||||| |||||||| ||||||| |||||  |||||||||||||||    
T  24868265 aaatattcgtaatactctacgaaaacctcttgattttatttaacttttggtgctataacttgcttgctttt 24868335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 40389322 - 40389391
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||  |||||||||||||||    
T  40389322 aaatattcgtagtactctacgagaacctcttgattttgttcaac-ttttgtgctataacttgcttgctttt 40389391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 40385732 - 40385801
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||| |||||||||  |||||||||||||||    
T  40385732 aaatattcgtagtacactacgaaaacctcttgattttattcaac-ttttgtgctataacttgcttgctttt 40385801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 18501638 - 18501566
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaa 287  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||  ||||||  ||||||||||||||||||    
T  18501638 aaatattcgtagtactctacgagaacctcttgattttatttaa-ttaatgtgctataacttgcttgcttttgaa 18501566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 27342099 - 27342171
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaa 287  Q
    ||||||||||| ||||||||||||||||||| ||||||||  | |||| |||||| |||||||||| |||||||    
T  27342099 aaatattcgtagtactctacgagaacctcttgattttatt-tatttttcgtgctttaacttgcttggttttgaa 27342171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 27343209 - 27343281
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaa 287  Q
    ||||||||||| ||||||||||||||||||| ||||||||  | |||| |||||| |||||||||| |||||||    
T  27343209 aaatattcgtagtactctacgagaacctcttgattttatt-tatttttcgtgctttaacttgcttggttttgaa 27343281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 15812192 - 15812239
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttt 261  Q
    ||||||||||| || |||||||||||||||| ||||||||||||||||    
T  15812192 aaatattcgtagtattctacgagaacctcttgattttattcaactttt 15812239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 5869798 - 5869837
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  5869798 aaatattcgtagtactctacgagaacctcttgattttatt 5869837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 5872909 - 5872948
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  5872909 aaatattcgtagtactctacgagaacctcttgattttatt 5872948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 20273657 - 20273696
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  20273657 aaatattcgtagtactctacgagaacctcttgattttatt 20273696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 29586589 - 29586550
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  29586589 aaatattcgtagtactctacgagaacctcttgattttatt 29586550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 21749010 - 21749054
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaa 172  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||    
T  21749010 atttgattagcgtttgactcagtttttatctcacgactgaacaaa 21749054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 21753587 - 21753631
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaa 172  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||    
T  21753587 atttgattagcgtttgactcagtttttatctcacgactgaacaaa 21753631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 21767738 - 21767782
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaa 172  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||    
T  21767738 atttgattagcgtttgactcagtttttatctcacgactgaacaaa 21767782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 24868121 - 24868149
Alignment:
Q  130 atttgattagcgtttgactcactttttat 158  Q
    |||||||||||||||||||||||||||||    
T  24868121 atttgattagcgtttgactcactttttat 24868149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0799 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0799
Description:

Target: scaffold0799; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 4581 - 4511
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  4581 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 4511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 2451 - 2381
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  2451 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 2381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 14114 - 14188
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  14114 aaatattcgtagtactctatgagaacctcttgattttatttaactttttgtgcttaaacttgcttgcttttgaag 14188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 17448 - 17522
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  17448 aaatattcgtagtactctatgagaacctcttgattttatttaactttttgtgcttaaacttgcttgcttttgaag 17522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 10329 - 10255
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||| ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  10329 aaatattcgtagtactctacgagtacctcttgattttatttaactttttgtgcttaaacttgcttgcttttgaag 10255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 17251 - 17177
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    |||||||| || ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  17251 aaatattcatagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgcttttgaag 17177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 59; Significance: 7e-25; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 170201 - 170271
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  170201 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 170271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 186705 - 186775
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  186705 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 186775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 186568 - 186655
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccattttaaaaa 215  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||        |||||||||||||| ||||| ||||||||| ||||    
T  186568 atttgattagcttttgactcactttttatctcacgactgaacaaattttttttaaggggaaaaagttccaaaccacccattttgaaaa 186655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 7e-25; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 6665156 - 6665086
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  6665156 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 6665086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 6672820 - 6672750
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  6672820 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 6672750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 12846666 - 12846592
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||    
T  12846666 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgattttgaag 12846592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 25706839 - 25706769
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  25706839 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 25706769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 25373162 - 25373092
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  25373162 aaatattagtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 25373092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 16738727 - 16738654
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaa 287  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||    
T  16738727 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgctataacttgcttgcttttgaa 16738654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 25402330 - 25402260
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||| ||| |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  25402330 aaatattagtagtactctacaagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 25402260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 25644845 - 25644772
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaa 287  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||| |||||||  ||||||||||||||||||    
T  25644845 aaatattcgtagtactctacgagaacctcttgattttatttaacttcttgtgctataacttgcttgcttttgaa 25644772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 20026238 - 20026308
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    |||||||||||  |||||||||||||||||| |||||||| ||||||| |||||  |||||||||||||||    
T  20026238 aaatattcgtagaactctacgagaacctcttgattttatttaacttttggtgctataacttgcttgctttt 20026308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 6665293 - 6665206
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccattttaaaaa 215  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||       ||||||||||||||| ||||| ||||||||| ||||    
T  6665293 atttgattagcttttgactcactttttatctcacgactgaacaaatttttttaaaggggaaaaagttccaaaccacccattttgaaaa 6665206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 6672957 - 6672870
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccattttaaaaa 215  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||       ||||||||||||||| ||||| ||||||||| ||||    
T  6672957 atttgattagcttttgactcactttttatctcacgactgaacaaatttttttaaaggggaaaaagttccaaaccacccattttgaaaa 6672870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 23640420 - 23640481
Alignment:
Q  226 tactctacgagaacctcttaattttattcaactttttgtgct-taaacttgcttgcttttgaa 287  Q
    ||||||||| |||||||||||||||||| || |||||||||| ||||||||||||||||||||    
T  23640420 tactctacgggaacctcttaattttatttaa-tttttgtgctataaacttgcttgcttttgaa 23640481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 32008138 - 32008099
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  32008138 aaatattcgtaatactctacgagaacctcttgattttatt 32008099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 22105704 - 22105786
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccatttt 210  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||        |||||||||||||| ||||| |||||||||    
T  22105704 atttgattggcgtttgactcactttttatctcacgactgaacaaattttttttaaggggaaaaagttccaaaccacccatttt 22105786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 22105824 - 22105868
Alignment:
Q  240 ctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||| |||||||| |||||||||||||||||||| |||||||||    
T  22105824 ctcttgattttatttaactttttgtgcttaaacttacttgctttt 22105868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 14890036 - 14890075
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  14890036 aaatattcgtagtactctacgagaacctcttgattttatt 14890075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 20735163 - 20735124
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  20735163 aaatattcgtagtactctacgagaacctcttgattttatt 20735124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 20743721 - 20743682
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  20743721 aaatattcgtagtactctacgagaacctcttgattttatt 20743682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 22155633 - 22155672
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  22155633 aaatattcgtagtactctacgagaacctcttgattttatt 22155672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 25857914 - 25857953
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  25857914 aaatattcgtagtactctacgagaacctcttgattttatt 25857953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 32001181 - 32001142
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  32001181 aaatattcgtaatactctacgagaacctcttgattatatt 32001142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 12846799 - 12846721
Alignment:
Q  134 gattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccatttt 210  Q
    |||||||||||||||||||||||||||||  ||||||||||        | |||||||||||| ||||| |||||||||    
T  12846799 gattagcgtttgactcactttttatctcacgactgaacaaattttttttatggggaaaaagttccaaaccacccatttt 12846721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 13387317 - 13387248
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| || ||||||||||||| || ||||||||  | ||||||||||| |||||||||| ||||    
T  13387317 aaatattcgtagtattctacgagaaccttttgattttatt-tattttttgtgctttaacttgcttgttttt 13387248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 7e-25; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 3676939 - 3676869
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  3676939 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 3676869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 3686074 - 3686004
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  3686074 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 3686004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 12702951 - 12702881
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  12702951 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 12702881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 16469344 - 16469414
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  16469344 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 16469414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 41441605 - 41441535
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  41441605 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 41441535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 6956733 - 6956803
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  6956733 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaatttgcttgctttt 6956803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 6971013 - 6971083
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  6971013 aaatatttgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 6971083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 14738074 - 14738144
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||    
T  14738074 aaatattcgtagtactctacgagaacctcttgattttatttaaatttttgtgcttaaacttgcttgctttt 14738144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 15985433 - 15985503
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| || |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  15985433 aaatattcgtagtattctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 15985503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 17216832 - 17216902
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||    
T  17216832 aaatattcgtagtactctacgagaaccttttgattttatttaactttttgtgcttaaacttgcttgctttt 17216902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 27874168 - 27874098
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||    
T  27874168 aaatattcgtagtactctacgagaacctcttgattttatttaattttttgtgcttaaacttgcttgctttt 27874098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 30013512 - 30013446
Alignment:
Q  218 attcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  30013512 attcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 30013446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 30022938 - 30022872
Alignment:
Q  218 attcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  30022938 attcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 30022872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 20435942 - 20435871
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaatttt-attcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||    
T  20435942 aaatattcgtagtactctacgagaacctcttgatttttatttaactttttgtgcttaaacttgcttgctttt 20435871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 20449868 - 20449797
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaatttt-attcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||    
T  20449868 aaatattcgtagtactctacgagaacctcttgatttttatttaactttttgtgcttaaacttgcttgctttt 20449797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 41433108 - 41433037
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaatttt-attcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||    
T  41433108 aaatattcgtagtactctacgagaacctcttgatttttatttaactttttgtgcttaaacttgcttgctttt 41433037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 2227095 - 2227031
Alignment:
Q  219 ttcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttt 283  Q
    |||||| ||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||    
T  2227095 ttcgtagtactctacgagaacctcttgatttcatttaactttttgtgcttaaacttgcttgcttt 2227031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 12997837 - 12997906
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||| |||||||||| |||||||||||||||    
T  12997837 aaatattcgtagtactctacgagaacctcttgattttatttaac-ttttgtgcttgaacttgcttgctttt 12997906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 16016155 - 16016217
Alignment:
Q  226 tactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| |||||||    
T  16016155 tactctacgagaacctcttgattttatttaactttttgttcttaaacttgcttgcatttgaag 16016217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 47730553 - 47730483
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    |||||||| || ||||||||||||||||||| ||||| || |||||||||||||||||||| |||| ||||    
T  47730553 aaatattcatagtactctacgagaacctcttgattttgtttaactttttgtgcttaaacttacttgttttt 47730483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 6956596 - 6956683
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccattttaaaaa 215  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||       ||||||||||||||| ||||| ||||||||| ||||    
T  6956596 atttgattagcttttgactcactttttatctcacgactgaacaaatttttttaaaggggaaaaagttccaaaccacccattttgaaaa 6956683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 6970876 - 6970963
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccattttaaaaa 215  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||       ||||||||||||||| ||||| ||||||||| ||||    
T  6970876 atttgattagcttttgactcactttttatctcacgactgaacaaatttttttaaaggggaaaaagttccaaaccacccattttgaaaa 6970963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 14737937 - 14738019
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccatttt 210  Q
    |||||||||||||||||||||||||||||||||  ||||||||||        |||||||||||||| ||||| | |||||||    
T  14737937 atttgattagcgtttgactcactttttatctcacgactgaacaaattttttttaaggggaaaaagttccaaaccatccatttt 14738019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 27874306 - 27874262
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaa 172  Q
    |||||||||||||||||||||||||||||||||  ||||||||||    
T  27874306 atttgattagcgtttgactcactttttatctcacgactgaacaaa 27874262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 282
Target Start/End: Original strand, 13104285 - 13104352
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctt 282  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||  ||||||  |||||||||||||    
T  13104285 aaatattcgtagtactctacgagaacctcttgattttatttaa-ttaatgtgctataacttgcttgctt 13104352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 282
Target Start/End: Original strand, 13110441 - 13110508
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctt 282  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||  ||||||  |||||||||||||    
T  13110441 aaatattcgtagtactctacgagaacctcttgattttatttaa-ttaatgtgctataacttgcttgctt 13110508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 69573 - 69534
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  69573 aaatattcgtagtactctacgagaacctcttgattttatt 69534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 75666 - 75627
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  75666 aaatattcgtagtactctacgagaacctcttgattttatt 75627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 262756 - 262717
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  262756 aaatattcgtagtactctacgagaacctcttgattttatt 262717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 12559261 - 12559194
Alignment:
Q  221 cgtaatactctacgagaacctcttaattttattcaactttttgtgct-taaacttgcttgcttttgaa 287  Q
    |||| ||||||||| ||||||||| |||||||| || ||  |||||| ||||||||||||||||||||    
T  12559261 cgtagtactctacgggaacctcttgattttatttaatttaatgtgctgtaaacttgcttgcttttgaa 12559194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 14879883 - 14879922
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  14879883 aaatattcgtagtactctacgagaacctcttgattttatt 14879922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 14886471 - 14886510
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  14886471 aaatattcgtagtactctacgagaacctcttgattttatt 14886510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 21637225 - 21637264
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  21637225 aaatattcgtagtactctacgagaacctcttgattttatt 21637264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 49965276 - 49965343
Alignment:
Q  221 cgtaatactctacgagaacctcttaattttattcaactttttgtgct-taaacttgcttgcttttgaa 287  Q
    |||| ||||||||| ||||||||| |||||||| || ||  |||||| ||||||||||||||||||||    
T  49965276 cgtagtactctacgggaacctcttgattttatttaatttaatgtgctataaacttgcttgcttttgaa 49965343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 16469208 - 16469289
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaannnnnnnaaaggggaaaaagtttcaaacaacccatttt 210  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||        |||||||||||||| ||||| |||||||||    
T  16469208 atttgattagcttttgactcactttttatctcacgactgaacaaattttttt-aaggggaaaaagttccaaaccacccatttt 16469289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 37469346 - 37469277
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| |||||| |||||||||||| ||||||||  | |||| |||||  |||||||||||||||    
T  37469346 aaatattcgtagtactctgcgagaacctcttgattttatt-tatttttcgtgctataacttgcttgctttt 37469277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 3412670 - 3412603
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctt 282  Q
    ||||||||||| ||||||||||||| ||||| |||||||| || ||  ||||||  |||||||||||||    
T  3412670 aaatattcgtagtactctacgagaatctcttgattttatttaa-ttaatgtgctataacttgcttgctt 3412603  T

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Target: scaffold0582 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 5984 - 6054
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||    
T  5984 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgcataaacttgcttgctttt 6054  T

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Target: scaffold0098 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 28930 - 28856
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaag 288  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||||||||||  |||||||||||||||||||    
T  28930 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgctataacttgcttgcttttgaag 28856  T

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Target: scaffold0031 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 32418 - 32483
Alignment:
Q  219 ttcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  32418 ttcgtagtactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 32483  T

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Target: scaffold0016 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 226 - 284
Target Start/End: Original strand, 56564 - 56622
Alignment:
Q  226 tactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  56564 tactctacgagaacctcttgattttatttaactttttgtgcttaaacttgcttgctttt 56622  T

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Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 56414 - 56458
Alignment:
Q  130 atttgattagcgtttgactcactttttatctca--actgaacaaa 172  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||    
T  56414 atttgattagcgtttgaatcactttttatctcacgactgaacaaa 56458  T

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Target: scaffold0005 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 299229 - 299160
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  299229 aaatattcgtagtactctacgagaacctcttgtttttattcaac-ttttgtgcttaaacttgcttgctttt 299160  T

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Target: scaffold0560 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 10747 - 10674
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaa 287  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||||||||||  |||||||||  |||||||    
T  10747 aaatattcgtagtactctacgagaacctcttgattttatttaactttttgtgctataacttgcttttttttgaa 10674  T

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Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 12201 - 12260
Alignment:
Q  219 ttcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgctt 278  Q
    |||||| ||||||||||||||||||| |||||||| |||||||||||||  |||||||||    
T  12201 ttcgtagtactctacgagaacctcttgattttatttaactttttgtgctataacttgctt 12260  T

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Target: scaffold0019; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 20457 - 20500
Alignment:
Q  219 ttcgtaatactctacgagaacctcttaattttattcaacttttt 262  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||    
T  20457 ttcgtagtactctacgagaacctcttgattttatttaacttttt 20500  T

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Target: scaffold0974 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 3375 - 3436
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgc 276  Q
    ||||||||||| |||| |||||||||||||| |||||||||||| ||||||||||||| ||||    
T  3375 aaatattcgtagtactttacgagaacctcttgattttattcaac-ttttgtgcttaaatttgc 3436  T

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Target: scaffold1699 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1699
Description:

Target: scaffold1699; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 18 - 87
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| ||||||||  | |||| |||||  |||||||||||||||    
T  18 aaatattcgtagtactctacgagaacctcttgattttatt-tatttttcgtgctataacttgcttgctttt 87  T

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Target: scaffold0043 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 31959 - 32028
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctttt 284  Q
    ||||||||||| ||||||||||||||||||| ||||||||  | |||| |||||  |||||||||||||||    
T  31959 aaatattcgtagtactctacgagaacctcttgattttatt-tatttttcgtgctataacttgcttgctttt 32028  T

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Target: scaffold0107 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 1042 - 1110
Alignment:
Q  219 ttcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgcttttgaa 287  Q
    |||||| ||||||||| ||||||||| |||||||| || ||  ||||||  ||||||||||||||||||    
T  1042 ttcgtattactctacgggaacctcttgattttatttaatttaatgtgctagaacttgcttgcttttgaa 1110  T

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Target: scaffold0478 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 1171 - 1210
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  1171 aaatattcgtagtactctacgagaacctcttgattttatt 1210  T

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Target: scaffold0393 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 2905 - 2866
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  2905 aaatattcgtagtactctacgagaacctcttgattttatt 2866  T

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Target: scaffold0152 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 15681 - 15614
Alignment:
Q  221 cgtaatactctacgagaacctcttaattttattcaactttttgtgct-taaacttgcttgcttttgaa 287  Q
    |||| ||||||||| |||||| || |||||||| || |||||||||| |||| |||||||||||||||    
T  15681 cgtagtactctacgggaaccttttgattttatttaattttttgtgctataaatttgcttgcttttgaa 15614  T

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Target: scaffold0119 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 38850 - 38889
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  38850 aaatattcgtagtactctacgagaacctcttgattttatt 38889  T

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Target: scaffold0083 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 25152 - 25113
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  25152 aaatattcgtagtactctacgagaacctcttgattttatt 25113  T

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Target: scaffold0077 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 1721 - 1682
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  1721 aaatattcgtagtactctacgagaacctcttgattttatt 1682  T

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Target: scaffold0029 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 36172 - 36211
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  36172 aaatattcgtagtactctacgagaacctcttgattttatt 36211  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 24987 - 24948
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttatt 253  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  24987 aaatattcgtagtactctacgagaacctcttgattttatt 24948  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 69328 - 69261
Alignment:
Q  214 aaatattcgtaatactctacgagaacctcttaattttattcaactttttgtgcttaaacttgcttgctt 282  Q
    ||||||| ||| ||||||||||||||||||| |||||||| || ||  ||||||  |||||||||||||    
T  69328 aaatatttgtagtactctacgagaacctcttgattttatttaa-ttaatgtgctataacttgcttgctt 69261  T

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