View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7753_low_43 (Length: 223)
Name: NF7753_low_43
Description: NF7753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7753_low_43 |
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Alignment Details
Target: chr4 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 49 - 211
Target Start/End: Original strand, 2299099 - 2299261
Alignment:
| Q |
49 |
atattgtcagtttttaatccatttacatgtcagaagttttgttgtaatgggtctagcaatctttaattataggagtcttctaaggttgtgaagacgtacc |
148 |
Q |
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| T |
2299099 |
atattgtcagttttccatccatttacatgtcagaagttttgttgtaatgggtctagcaatctttaactataggagtcttccaaggttgtgaagacgtacc |
2299198 |
T |
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| Q |
149 |
atagaccttttggttaatgctgttactatcccttattataaaagctaaaattcatattcttcg |
211 |
Q |
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|||||||||| |||||||| || ||||||||||||||||||||||||||||||||||| |||| |
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| T |
2299199 |
atagacctttcggttaatgttgctactatcccttattataaaagctaaaattcatattgttcg |
2299261 |
T |
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