View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7753_low_50 (Length: 206)

Name: NF7753_low_50
Description: NF7753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7753_low_50
NF7753_low_50
[»] chr8 (27 HSPs)
chr8 (1-65)||(22745665-22745729)
chr8 (1-65)||(17441717-17441781)
chr8 (1-65)||(18121018-18121082)
chr8 (1-65)||(18321068-18321132)
chr8 (1-65)||(19943415-19943479)
chr8 (1-65)||(24646516-24646580)
chr8 (1-64)||(16207484-16207547)
chr8 (2-65)||(20382305-20382366)
chr8 (1-65)||(29693493-29693557)
chr8 (1-65)||(39693713-39693777)
chr8 (1-63)||(17525641-17525701)
chr8 (1-65)||(17914637-17914701)
chr8 (1-52)||(19156374-19156425)
chr8 (1-50)||(12757687-12757736)
chr8 (1-65)||(17267651-17267713)
chr8 (3-52)||(23185150-23185199)
chr8 (1-65)||(33083035-33083097)
chr8 (3-50)||(15336014-15336061)
chr8 (3-50)||(15425079-15425126)
chr8 (3-50)||(15516383-15516430)
chr8 (1-52)||(21933061-21933112)
chr8 (3-50)||(22673956-22674003)
chr8 (3-65)||(23263522-23263582)
chr8 (3-50)||(36105373-36105420)
chr8 (3-52)||(3598270-3598319)
chr8 (1-65)||(16681214-16681276)
chr8 (3-52)||(17797600-17797649)
[»] chr7 (31 HSPs)
chr7 (1-65)||(10883085-10883149)
chr7 (1-65)||(11319587-11319651)
chr7 (1-57)||(15468098-15468154)
chr7 (1-65)||(11793089-11793153)
chr7 (1-65)||(22577935-22577997)
chr7 (1-65)||(29935273-29935335)
chr7 (1-65)||(13880286-13880350)
chr7 (1-52)||(2913533-2913584)
chr7 (1-52)||(21695583-21695634)
chr7 (1-52)||(30026087-30026138)
chr7 (1-52)||(44467247-44467298)
chr7 (3-52)||(9709729-9709778)
chr7 (1-42)||(13302992-13303033)
chr7 (1-65)||(16316471-16316533)
chr7 (3-52)||(16542947-16542996)
chr7 (3-52)||(16622666-16622715)
chr7 (3-52)||(33605868-33605917)
chr7 (3-52)||(48236829-48236878)
chr7 (1-65)||(14193256-14193320)
chr7 (5-52)||(331830-331877)
chr7 (1-52)||(15088702-15088753)
chr7 (23-65)||(13303042-13303084)
chr7 (3-64)||(19710925-19710987)
chr7 (3-52)||(2265446-2265495)
chr7 (3-52)||(9069746-9069795)
chr7 (1-42)||(13137830-13137871)
chr7 (1-65)||(13260537-13260599)
chr7 (1-65)||(21283287-21283349)
chr7 (15-63)||(13018421-13018469)
chr7 (1-33)||(23279903-23279935)
chr7 (1-33)||(33691656-33691688)
[»] chr5 (11 HSPs)
chr5 (1-65)||(21072132-21072196)
chr5 (1-52)||(26784536-26784587)
chr5 (6-65)||(23881253-23881312)
chr5 (1-52)||(41566338-41566389)
chr5 (16-65)||(12352709-12352758)
chr5 (3-50)||(42243863-42243910)
chr5 (3-33)||(11994070-11994100)
chr5 (1-39)||(23412891-23412929)
chr5 (1-65)||(17815150-17815212)
chr5 (1-65)||(19536193-19536255)
chr5 (3-39)||(89339-89375)
[»] chr3 (22 HSPs)
chr3 (1-65)||(20646340-20646404)
chr3 (1-65)||(52920590-52920654)
chr3 (1-65)||(49642672-49642736)
chr3 (1-65)||(6090917-6090981)
chr3 (1-64)||(13948521-13948584)
chr3 (1-65)||(15903384-15903448)
chr3 (1-65)||(31303571-31303635)
chr3 (1-52)||(16658541-16658592)
chr3 (21-65)||(41495179-41495223)
chr3 (3-52)||(47207892-47207941)
chr3 (1-52)||(2561373-2561424)
chr3 (3-65)||(11869253-11869316)
chr3 (1-52)||(18121545-18121596)
chr3 (1-39)||(12963021-12963059)
chr3 (3-52)||(20627356-20627405)
chr3 (12-65)||(29951348-29951401)
chr3 (12-65)||(30000502-30000555)
chr3 (3-52)||(47405346-47405395)
chr3 (1-61)||(49553405-49553463)
chr3 (3-31)||(5213761-5213789)
chr3 (3-39)||(37467520-37467556)
chr3 (4-52)||(40800060-40800108)
[»] chr2 (18 HSPs)
chr2 (1-65)||(25037115-25037179)
chr2 (1-65)||(25041222-25041286)
chr2 (1-63)||(30667169-30667231)
chr2 (1-65)||(20568606-20568670)
chr2 (1-65)||(22187958-22188022)
chr2 (1-65)||(23235187-23235251)
chr2 (1-65)||(7609142-7609204)
chr2 (1-65)||(10009607-10009669)
chr2 (1-65)||(24850521-24850585)
chr2 (6-65)||(22454846-22454905)
chr2 (1-65)||(19540596-19540658)
chr2 (1-52)||(24377281-24377332)
chr2 (3-42)||(35743883-35743922)
chr2 (26-65)||(38781602-38781641)
chr2 (3-52)||(20151905-20151954)
chr2 (1-62)||(21537107-21537168)
chr2 (3-31)||(22776190-22776218)
chr2 (3-31)||(22781568-22781596)
[»] chr1 (15 HSPs)
chr1 (1-65)||(20954304-20954368)
chr1 (1-64)||(22600014-22600077)
chr1 (1-64)||(38282751-38282814)
chr1 (1-65)||(23036360-23036422)
chr1 (1-65)||(35401994-35402056)
chr1 (1-65)||(7310003-7310067)
chr1 (1-61)||(22154042-22154102)
chr1 (1-65)||(33256184-33256246)
chr1 (1-65)||(33276356-33276418)
chr1 (1-65)||(48704389-48704451)
chr1 (1-52)||(28492248-28492299)
chr1 (3-65)||(2834875-2834937)
chr1 (6-52)||(26701973-26702019)
chr1 (1-65)||(19717709-19717771)
chr1 (3-52)||(22427203-22427252)
[»] scaffold0084 (1 HSPs)
scaffold0084 (2-65)||(49519-49582)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-65)||(377420-377484)
scaffold0004 (6-65)||(220428-220487)
[»] chr4 (21 HSPs)
chr4 (1-62)||(23123611-23123672)
chr4 (1-65)||(29680411-29680475)
chr4 (1-64)||(45833574-45833637)
chr4 (6-65)||(40846284-40846343)
chr4 (1-59)||(23750700-23750758)
chr4 (1-65)||(37435404-37435466)
chr4 (1-65)||(12811045-12811109)
chr4 (1-48)||(10073114-10073161)
chr4 (1-52)||(14904236-14904287)
chr4 (1-52)||(19884881-19884932)
chr4 (1-52)||(19911760-19911811)
chr4 (3-52)||(10693031-10693080)
chr4 (3-52)||(10906797-10906846)
chr4 (3-52)||(13575996-13576045)
chr4 (3-52)||(54680108-54680157)
chr4 (1-51)||(14833576-14833626)
chr4 (6-52)||(17247426-17247472)
chr4 (7-52)||(413186-413231)
chr4 (1-50)||(3395770-3395819)
chr4 (3-52)||(6517665-6517714)
chr4 (1-65)||(16632620-16632682)
[»] scaffold0861 (1 HSPs)
scaffold0861 (1-65)||(4808-4872)
[»] chr6 (16 HSPs)
chr6 (2-65)||(19624166-19624227)
chr6 (1-65)||(25597665-25597729)
chr6 (1-65)||(13435718-13435782)
chr6 (1-65)||(13602358-13602422)
chr6 (1-65)||(15531523-15531587)
chr6 (1-61)||(23284750-23284810)
chr6 (1-52)||(18435742-18435793)
chr6 (1-42)||(19086334-19086375)
chr6 (1-65)||(21625286-21625348)
chr6 (3-52)||(22802327-22802376)
chr6 (1-64)||(9718029-9718092)
chr6 (3-50)||(15954889-15954936)
chr6 (1-52)||(32544451-32544502)
chr6 (1-31)||(29918202-29918232)
chr6 (3-52)||(21235299-21235348)
chr6 (1-33)||(34451599-34451631)
[»] scaffold0771 (1 HSPs)
scaffold0771 (1-64)||(661-724)
[»] scaffold0485 (1 HSPs)
scaffold0485 (1-65)||(9269-9331)
[»] scaffold0290 (1 HSPs)
scaffold0290 (8-65)||(18482-18539)
[»] scaffold0395 (1 HSPs)
scaffold0395 (1-65)||(13394-13457)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-65)||(60730-60794)
[»] scaffold0227 (1 HSPs)
scaffold0227 (1-52)||(22862-22913)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-52)||(9981-10032)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-52)||(39611-39662)
scaffold0022 (1-52)||(137671-137722)
[»] scaffold1434 (1 HSPs)
scaffold1434 (1-65)||(649-711)
[»] scaffold0411 (1 HSPs)
scaffold0411 (8-65)||(12402-12459)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-61)||(36640-36700)
scaffold0120 (1-61)||(42305-42365)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-65)||(20832-20896)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-52)||(7889-7940)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-56)||(25845-25900)
[»] scaffold0026 (1 HSPs)
scaffold0026 (2-64)||(115708-115768)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-65)||(19335-19397)
scaffold0035 (10-50)||(99086-99126)
[»] scaffold0003 (1 HSPs)
scaffold0003 (3-52)||(89931-89980)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-64)||(9981-10042)
[»] scaffold0471 (1 HSPs)
scaffold0471 (3-50)||(3490-3537)
[»] scaffold0439 (1 HSPs)
scaffold0439 (3-50)||(6618-6665)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-52)||(5813-5864)
[»] scaffold0414 (1 HSPs)
scaffold0414 (3-33)||(7051-7081)
[»] scaffold0210 (1 HSPs)
scaffold0210 (1-39)||(1846-1884)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-51)||(30410-30460)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-51)||(6073-6123)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-65)||(5553-5615)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-65)||(103758-103820)
[»] scaffold0043 (1 HSPs)
scaffold0043 (4-52)||(78242-78290)


Alignment Details
Target: chr8 (Bit Score: 53; Significance: 1e-21; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 22745665 - 22745729
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||    
T  22745665 tcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgagatgcttctgatg 22745729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 17441781 - 17441717
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||||| |||||||||| |||||||| ||||||| ||||||||||||||    
T  17441781 tcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgattagatgcttctgatg 17441717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18121082 - 18121018
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||||| |||||||||| ||||| || ||||||||||||||||||||||    
T  18121082 tcttgcatctcctgatgaactagagcttctggtgatctttagcttctgatgagatgcttctgatg 18121018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18321132 - 18321068
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||| ||||||||||| ||||||   ||||||||||||||||||||||    
T  18321132 tcttgcatctcctgatgaacttcagcttctggtgatcttctacttctgatgagatgcttctgatg 18321068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19943415 - 19943479
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||| |||||||| || ||||| || ||||||||||||||||||||||    
T  19943415 tcttgcatctcctgatgaacttcagcttctagtgatctttagcttctgatgagatgcttctgatg 19943479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24646516 - 24646580
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||| |||||||||| |||||||||| |||||||| ||||||| ||||||||||||||    
T  24646516 tcttgcatctcttgatgaactagagcttctggtgatcttcagcttctgataagatgcttctgatg 24646580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16207484 - 16207547
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgat 64  Q
    |||||||||||||||||||||| |||||||||| ||||| || |||| ||||||||||||||||    
T  16207484 tcttgcatctcctgatgaactagagcttctggtgatctttagcttctaatgagatgcttctgat 16207547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 20382366 - 20382305
Alignment:
Q  2 cttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||| ||||||||||| |||||  | ||||||||||||||||||||||    
T  20382366 cttgcatctcctgatgaacttcagcttctggtgatctt--gcttctgatgagatgcttctgatg 20382305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29693493 - 29693557
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||| |||||||||| ||| |||| |||||||| || |||||||||||||||||||    
T  29693493 tcttgcatctcctaatgaactacaacttatggtgatcttcagcttatgatgagatgcttctgatg 29693557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39693713 - 39693777
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||| ||||| |||||||| |||||||| ||||||||| |||||| |||||    
T  39693713 tcttgcatctcctgatgagctacaacttctggtgatcttcagcttctgatgacatgcttttgatg 39693777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 17525701 - 17525641
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctga 63  Q
    ||||||||||||||||||||||||| ||||||| |||||  | ||||||||||||||||||||    
T  17525701 tcttgcatctcctgatgaactacagtttctggtgatctt--gcttctgatgagatgcttctga 17525641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17914637 - 17914701
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||| ||||| |||| ||||| ||||| || |||||||| ||||||||||||||||||||||    
T  17914637 tcttgcaactcctaatgagctacaacttctagtgatcttcagcttctgatgagatgcttctgatg 17914701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19156374 - 19156425
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||| |||||||||||| |||||||| |||||||| |||||||||    
T  19156374 tcttgcatctcttgatgaactacaacttctggtgatcttcagcttctgatga 19156425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 12757736 - 12757687
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgat 50  Q
    |||||||||||||||||||||| |||| ||||| |||||||| |||||||    
T  12757736 tcttgcatctcctgatgaactagagctactggtgatcttcagcttctgat 12757687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17267651 - 17267713
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||| ||||||||| ||||||||||| |||||  | |||||||||||||||| |||||    
T  17267651 tcttgcatctcttgatgaacttcagcttctggtgatctt--gcttctgatgagatgcttttgatg 17267713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 23185199 - 23185150
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||| ||||||||||| || ||||| |||||||||    
T  23185199 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 23185150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 33083035 - 33083097
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||| ||||||||||| |||||  | |||||||||| |||||| ||||    
T  33083035 tcttgcatctcctgatgaacttcagcttctggtgatctt--gcttctgatgagttgcttcagatg 33083097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 15336061 - 15336014
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgat 50  Q
    ||||||||||||||||||||||||||||||| ||  |||| |||||||    
T  15336061 ttgcatctcctgatgaactacagcttctggtgattctcagcttctgat 15336014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 15425126 - 15425079
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgat 50  Q
    ||||||||||||||||||||||||||||||| ||  |||| |||||||    
T  15425126 ttgcatctcctgatgaactacagcttctggtgattctcagcttctgat 15425079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 15516430 - 15516383
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgat 50  Q
    ||||||||||||||||||||||||||||||| ||  |||| |||||||    
T  15516430 ttgcatctcctgatgaactacagcttctggtgattctcagcttctgat 15516383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21933061 - 21933112
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||| || |||||||||| || ||||| |||||||||    
T  21933061 tcttgcatctcctgatgaaatagagcttctggtgattttcagcttctgatga 21933112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 22673956 - 22674003
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgat 50  Q
    |||||||||| ||||||||||| |||||||| |||||||| |||||||    
T  22673956 ttgcatctccggatgaactacaacttctggtgatcttcagcttctgat 22674003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 23263582 - 23263522
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||| ||||||||| | |||||  | |||||||||| |||||||||||    
T  23263582 ttgcatctcctgatgaacttcagcttctgatgatctt--gcttctgatgaggtgcttctgatg 23263522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 36105373 - 36105420
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgat 50  Q
    |||||||||||||||||||| |||||||||| || ||||| |||||||    
T  36105373 ttgcatctcctgatgaactatagcttctggtgattttcagcttctgat 36105420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 3598319 - 3598270
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||||| |||||||| ||  |||| |||||||||    
T  3598319 ttgcatctcctgatgaactacaacttctggtgattctcagcttctgatga 3598270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16681276 - 16681214
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||||  ||||||| || |||||  | || |||||||||||||||||||    
T  16681276 tcttgcatctcctgatgaactttagcttctagtgatctt--gcttatgatgagatgcttctgatg 16681214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 17797600 - 17797649
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||| || ||||||||||| || ||||| |||||||||    
T  17797600 ttgcatctcctgatgagctgcagcttctggtgattttcagcttctgatga 17797649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 1e-21; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10883149 - 10883085
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||    
T  10883149 tcttgcatctcctgatgaactacagcttctggtgatcttcagcttctgatgggatgcttctgatg 10883085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11319587 - 11319651
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||| |||||| ||||| |||||||| |||||||| ||||||||||||||||||||||    
T  11319587 tcttgcatctcttgatgacctacaacttctggtgatcttcagcttctgatgagatgcttctgatg 11319651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 15468098 - 15468154
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgc 57  Q
    |||||||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  15468098 tcttgcatctcctgatgaactagagcttctggtaatcttcagcatctgatgagatgc 15468154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11793089 - 11793153
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||| ||||||||||| ||||| || ||||||||||||| || |||||    
T  11793089 tcttgcatctcctgatgaacttcagcttctggtgatctttagcttctgatgagatgtttatgatg 11793153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22577997 - 22577935
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||| ||||||||||| |||||  |  |||||||||||||||||||||    
T  22577997 tcttgcatctcctgatgaacttcagcttctggtgatctt--gcctctgatgagatgcttctgatg 22577935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29935335 - 29935273
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||||  |||||||||| |||||  | ||||||||||||||||||||||    
T  29935335 tcttgcatctcctgatgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatg 29935273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 13880286 - 13880350
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||  ||||||||||||| |||||||  | |||||||| ||||||||||||||||||||||    
T  13880286 tcttgcaattcctgatgaactagagcttctcatgatcttcagcttctgatgagatgcttctgatg 13880350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 2913584 - 2913533
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||||||||| ||||||| |||||||  |||||||||    
T  2913584 tcttgcatctcctgatgaactacagtttctggtgatcttcatcttctgatga 2913533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21695583 - 21695634
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||| ||||||||| ||||||||||| |||||||| |||||||||    
T  21695583 tcttgcatctcttgatgaacttcagcttctggtgatcttcagcttctgatga 21695634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 30026087 - 30026138
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||| |||||||||| |||||||||| |||||||| |||||||||    
T  30026087 tcttgcatctcttgatgaactagagcttctggtgatcttcagcttctgatga 30026138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 44467247 - 44467298
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||||| |||||| |||| |||||||| |||||||||    
T  44467247 tcttgcatctcctgatgaacttcagcttttggtgatcttcagcttctgatga 44467298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 9709778 - 9709729
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||| ||||||||||| || ||||| |||||||||    
T  9709778 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 9709729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13302992 - 13303033
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcag 42  Q
    ||||||||||||| ||||||||||||||||||| ||||||||    
T  13302992 tcttgcatctcctaatgaactacagcttctggtgatcttcag 13303033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16316533 - 16316471
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||| ||||||||||| || |||||||| |||||  | ||||||||||||||||||||||    
T  16316533 tcttgcatcccctgatgaacttcaacttctggtgatctt--gcttctgatgagatgcttctgatg 16316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 16542996 - 16542947
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||| |||||| |||| || |||||||||||||||    
T  16542996 ttgcatctcctgatgaactgcagcttatggtgattttcagtttctgatga 16542947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 16622666 - 16622715
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||| |||||| |||| || |||||||||||||||    
T  16622666 ttgcatctcctgatgaactgcagcttatggtgattttcagtttctgatga 16622715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 33605868 - 33605917
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||| ||||||||||| || ||||| |||||||||    
T  33605868 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 33605917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 48236878 - 48236829
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||| ||||||||||| || ||||| |||||||||    
T  48236878 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 48236829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14193256 - 14193320
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||| |||||||||| ||||| |||| |||||| | ||||||| |||||||| |||||    
T  14193256 tcttgcatctcttgatgaactagagcttatggtgatcttctgcttctgataagatgcttatgatg 14193320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 331830 - 331877
Alignment:
Q  5 gcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||| ||| ||||||||||| |||||||| |||||||||    
T  331830 gcatctcctgatggacttcagcttctggtgatcttcagcttctgatga 331877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 15088702 - 15088753
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||| || |||||||||| |||||||| || ||||||    
T  15088702 tcttgcatctcctgatgaattagagcttctggtgatcttcagcttatgatga 15088753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 13303042 - 13303084
Alignment:
Q  23 cagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||| | |||||||| ||||||||||||||||||||||    
T  13303042 cagcttctgatgatcttcagcttctgatgagatgcttctgatg 13303084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 19710987 - 19710925
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagat-gcttctgat 64  Q
    |||||||| |||||||||||||| ||||||| || | ||||||||||||| || |||||||||    
T  19710987 ttgcatcttctgatgaactacagtttctggtgatatacagtttctgatgaaatagcttctgat 19710925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 2265495 - 2265446
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||||| |||||||| ||  |||| |||||||||    
T  2265495 ttgcatctcctgatgaactacaacttctggtgattctcagcttctgatga 2265446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 9069746 - 9069795
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||| || |||||||||| || ||||| |||||||||    
T  9069746 ttgcatctcctgatgaaatagagcttctggtgattttcagcttctgatga 9069795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13137871 - 13137830
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcag 42  Q
    ||||||||||||| |||||||| |||||||||| ||||||||    
T  13137871 tcttgcatctccttatgaactagagcttctggtgatcttcag 13137830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13260599 - 13260537
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||||  |||||||||| |||||  | |||| ||||||||||| |||||    
T  13260599 tcttgcatctcctgatgaactttagcttctggtgatctt--gcttctaatgagatgcttatgatg 13260537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21283349 - 21283287
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||| |||||||||||| || |||||||| |||||  | |||||||||||| |||||||||    
T  21283349 tcttgcatatcctgatgaacttcaacttctggtgatctt--gcttctgatgagattcttctgatg 21283287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 13018469 - 13018421
Alignment:
Q  15 atgaactacagcttctggtaatcttcagtttctgatgagatgcttctga 63  Q
    ||||||| ||||||||||| |||||| | |||||||||| |||||||||    
T  13018469 atgaacttcagcttctggtgatcttctgcttctgatgaggtgcttctga 13018421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23279935 - 23279903
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggt 33  Q
    |||||||||||||||||||||||| ||||||||    
T  23279935 tcttgcatctcctgatgaactacaacttctggt 23279903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 33691688 - 33691656
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggt 33  Q
    |||||||||||||||||||||| ||||||||||    
T  33691688 tcttgcatctcctgatgaactagagcttctggt 33691656  T

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Target: chr5 (Bit Score: 53; Significance: 1e-21; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21072196 - 21072132
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  21072196 tcttgcatctcctgatgaacttcagcttctggtgatcttcagcttctgatgagatgcttctgatg 21072132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 26784536 - 26784587
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  26784536 tcttgcatctcctgctgaactacagcttctggtgatcttcagcttctgatga 26784587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 23881253 - 23881312
Alignment:
Q  6 catctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||| |||||||||| |||||||||||  ||||||| |||||||||| |||||||||||    
T  23881253 catcttctgatgaacttcagcttctggtgttcttcagcttctgatgaggtgcttctgatg 23881312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41566389 - 41566338
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||||||| |||||| | |||||||| |||||||||    
T  41566389 tcttgcatctcctgatgaactacaacttctgatgatcttcagcttctgatga 41566338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 12352758 - 12352709
Alignment:
Q  16 tgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  12352758 tgaacttcagcttctggtgatcttcagcttctgatgagatgcttttgatg 12352709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 42243863 - 42243910
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgat 50  Q
    ||||||||||||||||||||||||||||||| ||  ||||||| ||||    
T  42243863 ttgcatctcctgatgaactacagcttctggtgattctcagtttttgat 42243910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 11994070 - 11994100
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggt 33  Q
    |||||||||||||||||||||||||||||||    
T  11994070 ttgcatctcctgatgaactacagcttctggt 11994100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23412929 - 23412891
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatctt 39  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  23412929 tcttgcatctcctgatgaacttcagcttctggtgatctt 23412891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17815150 - 17815212
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||| ||||||| |  |||||||||| |||||  | ||||||||||||||||||||||    
T  17815150 tcttgcatctcttgatgaaatttagcttctggtgatctt--gcttctgatgagatgcttctgatg 17815212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19536255 - 19536193
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||| | |||||| |  |||||  | ||||||||||||||||||||||    
T  19536255 tcttgcatctcctgatgaacttctgcttcttgcgatctt--gcttctgatgagatgcttctgatg 19536193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 89375 - 89339
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatctt 39  Q
    |||||||||||||||||||||| |||||||| |||||    
T  89375 ttgcatctcctgatgaactacaacttctggtgatctt 89339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 1e-21; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 20646340 - 20646404
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  20646340 tcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatg 20646404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 52920590 - 52920654
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  52920590 tcttgcatctcctgatgaacttcagcttctggtgatcttcagcttctgatgagatgcttctgatg 52920654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 49642736 - 49642672
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||| |||||||||||||||||    
T  49642736 tcttgcatctcctgatgaactacaacttctggtgatcttcagcttctaatgagatgcttctgatg 49642672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6090917 - 6090981
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||| ||||||||||| |||||| | |||||||||||||||| |||||    
T  6090917 tcttgcatctcctgatgaacttcagcttctggtgatcttctgcttctgatgagatgcttttgatg 6090981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 13948521 - 13948584
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgat 64  Q
    |||||||||||||||||| ||  |||||||||| |||||||| |||||||||||||||||||||    
T  13948521 tcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgatgagatgcttctgat 13948584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15903384 - 15903448
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||| || |||||||| |||| |||||||| ||||||||||||| ||||||||    
T  15903384 tcttgcatctcctgataaattacagcttttggtgatcttcagcttctgatgagatggttctgatg 15903448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 31303571 - 31303635
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||| ||||||||||  ||||| |||||||||| |||||||| ||||||||||||||||||||||    
T  31303571 tctttcatctcctgagtaactagagcttctggtgatcttcagcttctgatgagatgcttctgatg 31303635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16658592 - 16658541
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||||||    
T  16658592 tcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 16658541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 41495179 - 41495223
Alignment:
Q  21 tacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||| |||||||| |||||||||||||||||||||||||||||||    
T  41495179 tacaacttctggtgatcttcagtttctgatgagatgcttctgatg 41495223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 47207892 - 47207941
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||| ||||||||||| || ||||| |||||||||    
T  47207892 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 47207941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 2561373 - 2561424
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||||| |||||||||| ||  |||| |||||||||    
T  2561373 tcttgcatctcctgatgaactagagcttctggtgattctcagcttctgatga 2561424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 11869253 - 11869316
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgaga-tgcttctgatg 65  Q
    ||||||| ||||||||||| ||||||||||| || ||||| ||||||||| | |||||||||||    
T  11869253 ttgcatcccctgatgaactgcagcttctggtgattttcagcttctgatgaaattgcttctgatg 11869316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 18121596 - 18121545
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||||| |||||||||| ||||| || || ||||||    
T  18121596 tcttgcatctcctgatgaactagagcttctggtgatctttagcttatgatga 18121545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12963059 - 12963021
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatctt 39  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  12963059 tcttgcatctcctgatgaactacaacttctggtgatctt 12963021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 20627405 - 20627356
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||| || |||||||| || ||||| |||||||||    
T  20627405 ttgcatctcctgatgaactgcaacttctggtgattttcagcttctgatga 20627356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 29951401 - 29951348
Alignment:
Q  12 ctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||| |||||||| || |||||||| ||||||| || |||||||||||    
T  29951401 ctgatgaacttcagcttctagtgatcttcagcttctgataaggtgcttctgatg 29951348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 30000555 - 30000502
Alignment:
Q  12 ctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||| |||||||| || |||||||| ||||||| || |||||||||||    
T  30000555 ctgatgaacttcagcttctagtgatcttcagcttctgataaggtgcttctgatg 30000502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 47405395 - 47405346
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||| ||||||||| ||||||||||| || ||||| |||||||||    
T  47405395 ttgcatctcgtgatgaactgcagcttctggtgattttcagcttctgatga 47405346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 49553463 - 49553405
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttct 61  Q
    ||||||||||||||||||||| | ||||||||| |||||    ||||||||||||||||||    
T  49553463 tcttgcatctcctgatgaacttcggcttctggtgatctt--acttctgatgagatgcttct 49553405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 31
Target Start/End: Original strand, 5213761 - 5213789
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctg 31  Q
    |||||||||||||||||||||||||||||    
T  5213761 ttgcatctcctgatgaactacagcttctg 5213789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 37467520 - 37467556
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatctt 39  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  37467520 ttgcatctcctgatgaactactgcttctggtgatctt 37467556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 40800060 - 40800108
Alignment:
Q  4 tgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||| ||||||||| ||||||||||| || ||||| |||||||||    
T  40800060 tgcatctcttgatgaactgcagcttctggtgattttcagcttctgatga 40800108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 1e-21; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 25037179 - 25037115
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  25037179 tcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatg 25037115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 25041286 - 25041222
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  25041286 tcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatg 25041222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 30667169 - 30667231
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctga 63  Q
    |||||||||||||||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  30667169 tcttgcatctcctgatgaactacaacttctgatattcttcagcttctgatgagatgcttctga 30667231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20568670 - 20568606
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||||||||||||||| ||||| |  |||| |||||||||||||||||    
T  20568670 tcttgcatctcctgatgaactacagcttctggtgatcttgaacttcttatgagatgcttctgatg 20568606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22188022 - 22187958
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||| |||||||||||| || |||||||| |||||||| ||||||||||||||||||||||    
T  22188022 tcttgcatgtcctgatgaacttcaacttctggtgatcttcagcttctgatgagatgcttctgatg 22187958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23235187 - 23235251
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||| |||||||||| |||||||||| || ||||| ||||||||||||||||||||||    
T  23235187 tcttgcatctcatgatgaactagagcttctggtgattttcagcttctgatgagatgcttctgatg 23235251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7609142 - 7609204
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||||  |||||||||| |||||  | ||||||||||||||||||||||    
T  7609142 tcttgcatctcctgatgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatg 7609204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10009669 - 10009607
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||| ||||||||||| |||||    ||||||||||||||||||||||    
T  10009669 tcttgcatctcctgatgaacttcagcttctggtgatctt--tcttctgatgagatgcttctgatg 10009607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24850585 - 24850521
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||| ||| |||| |||||| ||||| || |||||||||| |||||||||||    
T  24850585 tcttgcatctcctgatgtacttcagcatctggtgatctttagcttctgatgaggtgcttctgatg 24850521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 22454905 - 22454846
Alignment:
Q  6 catctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||| |||| ||||| ||||||||||| |||||||| |||||||||| |||||||||||    
T  22454905 catcttctgaagaacttcagcttctggtgatcttcagcttctgatgaggtgcttctgatg 22454846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19540596 - 19540658
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||| ||||||||| ||||||||||| |||||  | |||||||||| |||||||||||    
T  19540596 tcttgcatctcatgatgaacttcagcttctggtgatctt--gcttctgatgaggtgcttctgatg 19540658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24377281 - 24377332
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||| ||||||||| ||||||||||| ||||| || |||||||||    
T  24377281 tcttgcatctcttgatgaacttcagcttctggtgatctttagcttctgatga 24377332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 35743922 - 35743883
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcag 42  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  35743922 ttgcatctcctgatgaactacagcttctggtgattttcag 35743883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 38781602 - 38781641
Alignment:
Q  26 cttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  38781602 cttctggtgatcttcagcttctgatgagatgcttctgatg 38781641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 20151954 - 20151905
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||| || ||||||||||| || ||||| |||||||||    
T  20151954 ttgcatctcctgatgagctgcagcttctggtgattttcagcttctgatga 20151905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21537168 - 21537107
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctg 62  Q
    ||||||||||||||||||||| || ||||| || ||||| |  |||||||||| ||||||||    
T  21537168 tcttgcatctcctgatgaacttcatcttctagtgatctttaacttctgatgaggtgcttctg 21537107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 31
Target Start/End: Complemental strand, 22776218 - 22776190
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctg 31  Q
    |||||||||||||||||||||||||||||    
T  22776218 ttgcatctcctgatgaactacagcttctg 22776190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 31
Target Start/End: Complemental strand, 22781596 - 22781568
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctg 31  Q
    |||||||||||||||||||||||||||||    
T  22781596 ttgcatctcctgatgaactacagcttctg 22781568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 1e-21; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20954368 - 20954304
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||    
T  20954368 tcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgagatgcttctgatg 20954304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 22600077 - 22600014
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgat 64  Q
    |||||||||||||||||||||| |||||||||| ||||| || |||||||||||||||||||||    
T  22600077 tcttgcatctcctgatgaactagagcttctggtgatctttagcttctgatgagatgcttctgat 22600014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 38282751 - 38282814
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgat 64  Q
    |||||||||||||||||||||| ||||| |||| ||||| ||  ||||||||||||||||||||    
T  38282751 tcttgcatctcctgatgaactagagcttttggtgatctttagcatctgatgagatgcttctgat 38282814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23036422 - 23036360
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||| |||||||   |||||||||||| |||||||| ||||||||||||||||||||||    
T  23036422 tcttgcatcttctgatgag--acagcttctggtgatcttcagcttctgatgagatgcttctgatg 23036360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35401994 - 35402056
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||| |||||||   |||||||||||| |||||||| ||||||||||||||||||||||    
T  35401994 tcttgcatcttctgatgag--acagcttctggtgatcttcagcttctgatgagatgcttctgatg 35402056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7310003 - 7310067
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||| ||  ||||| |||| |||||||| ||||||||||||| ||||||||    
T  7310003 tcttgcatctcctgatgagctttagcttatggtgatcttcagcttctgatgagatgtttctgatg 7310067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22154042 - 22154102
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttct 61  Q
    ||||||||||||||||||||| ||||||||||| ||||||   |||| |||||||||||||    
T  22154042 tcttgcatctcctgatgaacttcagcttctggtgatcttctacttcttatgagatgcttct 22154102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33256246 - 33256184
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||| ||||||  |||||||||| |||||  | ||||||||||||||||||||||    
T  33256246 tcttgcatctcctgttgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatg 33256184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33276418 - 33276356
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||| ||||||  |||||||||| |||||  | ||||||||||||||||||||||    
T  33276418 tcttgcatctcctggtgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatg 33276356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 48704389 - 48704451
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||| ||||||||||  |||||||||| ||||  || ||||||||||||||||||||||    
T  48704389 tcttgcatcttctgatgaactttagcttctggtgatct--agcttctgatgagatgcttctgatg 48704451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 28492299 - 28492248
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||||||| ||||||   |||||||| |||||||||    
T  28492299 tcttgcatctcctgatgaactacaacttctgaagatcttcagcttctgatga 28492248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 2834875 - 2834937
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||| |||||||| ||||||||||| || ||||| |||| ||||  |||||||||||    
T  2834875 ttgcatctcccgatgaactgcagcttctggtgattttcagcttctaatgacttgcttctgatg 2834937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 26702019 - 26701973
Alignment:
Q  6 catctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||| ||||||||||  |||||||||| ||||||||||||||||||    
T  26702019 catcttctgatgaactttagcttctggtgatcttcagtttctgatga 26701973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19717709 - 19717771
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||  |||||||  |||||||||| |||||  | ||||||||||||||||||||||    
T  19717709 tcttgcatctccatatgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatg 19717771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 22427252 - 22427203
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||  |||||||||| || ||||| |||||||||    
T  22427252 ttgcatctcctgatgaactggagcttctggtgattttcagcttctgatga 22427203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 49519 - 49582
Alignment:
Q  2 cttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  49519 cttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatg 49582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 377484 - 377420
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||||    
T  377484 tcttgcatctcctgatgaactataacttctggtgatcttcagcttctgatgagatgcttctgatg 377420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 220428 - 220487
Alignment:
Q  6 catctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||| |||||||||||    
T  220428 catctcctgatgaacttcagcttctggtgatcttcagcttctgatgaggtgcttctgatg 220487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23123611 - 23123672
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctg 62  Q
    ||||||||||||||||||||| ||||||||||| |||||| | |||||||||||||||||||    
T  23123611 tcttgcatctcctgatgaacttcagcttctggtgatcttctgcttctgatgagatgcttctg 23123672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29680475 - 29680411
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||| | ||||| |||||||||| |||||||| ||||||||||||||||||||||    
T  29680475 tcttgcatctcctggtaaactagagcttctggtgatcttcagcttctgatgagatgcttctgatg 29680411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 45833574 - 45833637
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgat 64  Q
    |||||||||||||||||||||| |||||||||| ||||| || |||||||||||||||| ||||    
T  45833574 tcttgcatctcctgatgaactagagcttctggtgatctttagcttctgatgagatgcttatgat 45833637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 40846284 - 40846343
Alignment:
Q  6 catctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||| |||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||    
T  40846284 catcttctgatgaacttcagcttccggtgatcttcagcttctgatgagatgcttctgatg 40846343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23750700 - 23750758
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgctt 59  Q
    ||||||||||||||||||||| ||||||||||| ||||| |  ||||||||||||||||    
T  23750700 tcttgcatctcctgatgaacttcagcttctggttatctttaacttctgatgagatgctt 23750758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 37435466 - 37435404
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||| ||||||||||| |||||  |  |||||||||||||||||||||    
T  37435466 tcttgcatctcctgatgaacttcagcttctggtgatctt--gcctctgatgagatgcttctgatg 37435404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12811109 - 12811045
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||| |||||||| |||||||||| ||||||   | ||||||||||||||||||||    
T  12811109 tcttgcatctcctaatgaactagagcttctggtgatcttctactactgatgagatgcttctgatg 12811045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10073114 - 10073161
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctg 48  Q
    ||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  10073114 tcttgcatctcctgatgaactactgcttctggtaattttcagcttctg 10073161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14904287 - 14904236
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||||||| |||||||| |||||||| || ||||||    
T  14904287 tcttgcatctcctgatgaactacaacttctggtgatcttcagattttgatga 14904236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19884881 - 19884932
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||||||||||||||||| ||  |||| |||||||||    
T  19884881 tcttgcatctcctgatgaactacagcttctggtgattgtcagcttctgatga 19884932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 19911811 - 19911760
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||||||| |||||| | |||||||| |||||||||    
T  19911811 tcttgcatctcctgatgaactacaacttctgatgatcttcagcttctgatga 19911760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 10693031 - 10693080
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||||||||||||||| ||  |||| |||||||||    
T  10693031 ttgcatctcctgatgaactacagcttctggtgattctcagcttctgatga 10693080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 10906797 - 10906846
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||||||||||||||| ||  |||| |||||||||    
T  10906797 ttgcatctcctgatgaactacagcttctggtgattctcagcttctgatga 10906846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 13576045 - 13575996
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||| ||||||||||| || ||||| |||||||||    
T  13576045 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 13575996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 54680108 - 54680157
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||| ||||||||||| || ||||| |||||||||    
T  54680108 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 54680157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14833576 - 14833626
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatg 51  Q
    ||||||||||||||||||| |||| |||||||  |||||||| ||||||||    
T  14833576 tcttgcatctcctgatgaattacaacttctggagatcttcagcttctgatg 14833626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 17247426 - 17247472
Alignment:
Q  6 catctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||| ||||||||||| || ||||| |||||||||    
T  17247426 catctcctgatgaactgcagcttctggtgattttcagcttctgatga 17247472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 413186 - 413231
Alignment:
Q  7 atctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||| ||||||||||| || ||||| |||||||||    
T  413186 atctcctgatgaactgcagcttctggtgattttcagcttctgatga 413231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3395770 - 3395819
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgat 50  Q
    |||||||||||||||||||||| ||||||| || |||||||  |||||||    
T  3395770 tcttgcatctcctgatgaactatagcttctagtgatcttcaacttctgat 3395819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 6517665 - 6517714
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||||| |||||||| ||  |||| |||||||||    
T  6517665 ttgcatctcctgatgaactacaacttctggtgattctcagcttctgatga 6517714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16632620 - 16632682
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||||  ||||||| || |||||  | |||||||||||||||| |||||    
T  16632620 tcttgcatctcctgatgaactttagcttctagtgatctt--gcttctgatgagatgcttttgatg 16632682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4872 - 4808
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||| ||||||||||| |||||||||| |||||||| || |||||||||||||||||||    
T  4872 tcttgcatcttctgatgaactagagcttctggtgatcttcagcttatgatgagatgcttctgatg 4808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 8e-17; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 19624166 - 19624227
Alignment:
Q  2 cttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||| ||||||||||| |||||  ||||||||||||||||||||||||    
T  19624166 cttgcatctcctgatgaacttcagcttctggtgatctt--gtttctgatgagatgcttctgatg 19624227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25597665 - 25597729
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||| ||||||||||||||| |||||||| |||||||| || |||||||||||||||||||    
T  25597665 tcttgcatgtcctgatgaactacaacttctggtgatcttcagcttatgatgagatgcttctgatg 25597729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 13435718 - 13435782
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||| |||||| |||| |||||| | |||||||||||||||| |||||    
T  13435718 tcttgcatctcctgatgaacttcagcttatggtgatcttctgcttctgatgagatgcttttgatg 13435782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 13602358 - 13602422
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||||| ||||||| || |||||| | || |||||||||||||||||||    
T  13602358 tcttgcatctcctgatgaactatagcttcttgtgatcttcggcttttgatgagatgcttctgatg 13602422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15531587 - 15531523
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||| ||||||||||||| |||||||| |||||  | ||||||||||||||||||||||    
T  15531587 tcttgcatcttctgatgaactacaacttctggtgatcttatgattctgatgagatgcttctgatg 15531523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23284750 - 23284810
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttct 61  Q
    ||||||||||||||||||||| |||||||| |  |||||| | ||||||||||||||||||    
T  23284750 tcttgcatctcctgatgaacttcagcttctagcgatcttctgcttctgatgagatgcttct 23284810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 18435742 - 18435793
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||||| ||||||| || |||||||| |||||||||    
T  18435742 tcttgcatctcctgatgaactagagcttctagtgatcttcagcttctgatga 18435793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 19086334 - 19086375
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcag 42  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  19086334 tcttgcatctcctgatgaacttcagcttctggtgatcttcag 19086375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21625286 - 21625348
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||   ||| |||||||| |||||||| |||||||||||||||| |||||    
T  21625286 tcttgcatctcctgatgag--acaacttctggtgatcttcagcttctgatgagatgcttatgatg 21625348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 22802327 - 22802376
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||||| |||||||| || ||||| |||||||||    
T  22802327 ttgcatctcctgatgaactacaacttctggtgattttcagcttctgatga 22802376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9718029 - 9718092
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgat 64  Q
    |||||||||||||||||||||| ||||||| || ||||| |  |||||||| ||||||| ||||    
T  9718029 tcttgcatctcctgatgaactagagcttctagtgatctttaacttctgatgggatgcttatgat 9718092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 15954889 - 15954936
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgat 50  Q
    ||||||||| ||||||||||||||||||||||||  |||| |||||||    
T  15954889 ttgcatctcttgatgaactacagcttctggtaattctcagcttctgat 15954936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 32544451 - 32544502
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||||| ||||| |||| || ||||| |||||||||    
T  32544451 tcttgcatctcctgatgaactagagcttatggtgattttcagcttctgatga 32544502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 29918202 - 29918232
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctg 31  Q
    |||||||||||||||||||||||||||||||    
T  29918202 tcttgcatctcctgatgaactacagcttctg 29918232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 21235299 - 21235348
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||| |||||||| || || ||||| |||||||||    
T  21235299 ttgcatctcctgatgaactgcagcttctagtgattttcagcttctgatga 21235348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 34451631 - 34451599
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggt 33  Q
    |||||||||||||||||||||| ||||||||||    
T  34451631 tcttgcatctcctgatgaactagagcttctggt 34451599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 661 - 724
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgat 64  Q
    |||||||||||||||||| ||  |||||||||| |||||||| |||||||||||||||||||||    
T  661 tcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgatgagatgcttctgat 724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9331 - 9269
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||| ||||||||||| |||||  | ||||||||||||||||||||||    
T  9331 tcttgcatctcctgatgaacttcagcttctggtgatctt--gcttctgatgagatgcttctgatg 9269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 18539 - 18482
Alignment:
Q  8 tctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||| ||||||||||| |||||||| || |||||||||||||||||||    
T  18539 tctcctgatgaactgcagcttctggtgatcttcagcttatgatgagatgcttctgatg 18482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13457 - 13394
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||| ||||||||| |||||||||||  ||||||| ||||||||||||||||||||||    
T  13457 tcttgcatctc-tgatgaacttcagcttctggtgttcttcagcttctgatgagatgcttctgatg 13394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 60794 - 60730
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||| |||||||||| |||||| |||| |||||||| |||| |||||||||||||||||    
T  60794 tcttgcatcttctgatgaacttcagcttgtggtgatcttcagcttctaatgagatgcttctgatg 60730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 22862 - 22913
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||||||||| |||||| |||||||| |||||||||    
T  22862 tcttgcatctcctgatgaactacagcctctggtgatcttcagcttctgatga 22913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10032 - 9981
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  10032 tcttgcatctcctgatgaacttcagcttctggtgattttcagtttctgatga 9981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 39611 - 39662
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||    
T  39611 tcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatga 39662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 137671 - 137722
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||    
T  137671 tcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatga 137722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 711 - 649
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    |||||||||||||||||||||  |||||||||| |||||  | ||||||||||||||||||||||    
T  711 tcttgcatctcctgatgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatg 649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 12402 - 12459
Alignment:
Q  8 tctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||| |||||||||| ||| |||  ||||||||||||||||||||||    
T  12402 tctcctgatgaactagagcttctggtgatcctcaacttctgatgagatgcttctgatg 12459  T

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Target: scaffold0120 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36700 - 36640
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttct 61  Q
    ||||||||||| ||||||||| |||||||| || |||||| | ||||||||||||||||||    
T  36700 tcttgcatctcttgatgaacttcagcttctagtgatcttctgcttctgatgagatgcttct 36640  T

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Target: scaffold0120; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42305 - 42365
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttct 61  Q
    ||||||||||| ||||||||| |||||||| || |||||| | ||||||||||||||||||    
T  42305 tcttgcatctcttgatgaacttcagcttctagtgatcttctgcttctgatgagatgcttct 42365  T

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Target: scaffold0116 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20896 - 20832
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||| ||||||||| || ||| |||| |||||||| |||| |||||||||||||||||    
T  20896 tcttgcatctcttgatgaacttcaacttttggtgatcttcagcttctaatgagatgcttctgatg 20832  T

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Target: scaffold0251 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7889 - 7940
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||| || |||||||||| |||||||| |||||||||    
T  7889 tcttgcatctcctgatgaaatagagcttctggtgatcttcagcttctgatga 7940  T

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Target: scaffold0083 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25900 - 25845
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatg 56  Q
    |||||||||||||||||| ||  |||||||||| |||||||| |||||||||||||    
T  25900 tcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgatgagatg 25845  T

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Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 115708 - 115768
Alignment:
Q  2 cttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgat 64  Q
    |||||||||||||||||||  ||||||||||| |||||  | |||||||||||||||||||||    
T  115708 cttgcatctcctgatgaacatcagcttctggtgatctt--gcttctgatgagatgcttctgat 115768  T

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Target: scaffold0035 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19397 - 19335
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||| |||||||||| |||||||| |||||  | |||| |||||||||||||||||    
T  19397 tcttgcatctcctcatgaactacaacttctggtgatctt--gcttcttatgagatgcttctgatg 19335  T

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Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 99126 - 99086
Alignment:
Q  10 tcctgatgaactacagcttctggtaatcttcagtttctgat 50  Q
    ||||||||||||||| |||||||| |||||||| |||||||    
T  99126 tcctgatgaactacaacttctggtgatcttcagcttctgat 99086  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 89980 - 89931
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||||||||| ||||||||||| || ||||| |||||||||    
T  89980 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 89931  T

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Target: scaffold0334 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9981 - 10042
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgat 64  Q
    |||||||||||| |||||||| ||||||||||| |||||  | || ||||||||||||||||||    
T  9981 tcttgcatctccagatgaacttcagcttctggtgatctt--gcttatgatgagatgcttctgat 10042  T

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Target: scaffold0471 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 3490 - 3537
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgat 50  Q
    |||||||||||||||||||| |||||||||| || ||||| |||||||    
T  3490 ttgcatctcctgatgaactatagcttctggtgattttcagcttctgat 3537  T

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Target: scaffold0439 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 6665 - 6618
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggtaatcttcagtttctgat 50  Q
    ||||||||||||||||||||||||||||||| ||  |||| |||||||    
T  6665 ttgcatctcctgatgaactacagcttctggtgattctcagcttctgat 6618  T

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Target: scaffold0261 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 5864 - 5813
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    ||||||||||||| ||||||| ||||||||||| ||||| || |||||||||    
T  5864 tcttgcatctcctaatgaacttcagcttctggtgatctttagcttctgatga 5813  T

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Target: scaffold0414 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 7081 - 7051
Alignment:
Q  3 ttgcatctcctgatgaactacagcttctggt 33  Q
    |||||||||||||||||||||||||||||||    
T  7081 ttgcatctcctgatgaactacagcttctggt 7051  T

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Target: scaffold0210 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1846 - 1884
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatctt 39  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  1846 tcttgcatctcctgatgaacttcagcttctggtgatctt 1884  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30410 - 30460
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatg 51  Q
    ||||||||||||||||||| |||| |||||||  |||||||| ||||||||    
T  30410 tcttgcatctcctgatgaattacaacttctggagatcttcagcttctgatg 30460  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6123 - 6073
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatg 51  Q
    ||||||||||||||||||| |||| |||||||  |||||||| ||||||||    
T  6123 tcttgcatctcctgatgaattacaacttctggagatcttcagcttctgatg 6073  T

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Target: scaffold0359 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5615 - 5553
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||| ||||||| ||| |||||  | ||||  ||||||||||||||||    
T  5615 tcttgcatctcctgatgaacttcagcttcaggtgatctt--gcttctagtgagatgcttctgatg 5553  T

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Target: scaffold0023 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 103758 - 103820
Alignment:
Q  1 tcttgcatctcctgatgaactacagcttctggtaatcttcagtttctgatgagatgcttctgatg 65  Q
    ||||||||||||||||||||| |||||||||||   |||  | |||||||||||| |||||||||    
T  103758 tcttgcatctcctgatgaacttcagcttctggtgtcctt--gcttctgatgagatacttctgatg 103820  T

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Target: scaffold0043 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 78290 - 78242
Alignment:
Q  4 tgcatctcctgatgaactacagcttctggtaatcttcagtttctgatga 52  Q
    |||||||| ||||||||||||||||||||| ||  |||| |||||||||    
T  78290 tgcatctcatgatgaactacagcttctggtgattctcagattctgatga 78242  T

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