View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7755_low_23 (Length: 319)
Name: NF7755_low_23
Description: NF7755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7755_low_23 |
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Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 45299442 - 45299206
Alignment:
| Q |
14 |
ttctccatatattgtatccatcaatttcctaaacacaaaataactaaacattgtgcccatgatcacttgatgaatctccaacattagatttagatatcat |
113 |
Q |
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| T |
45299442 |
ttctccatatattgtatccatcaatttcctaaacacaa--taactaaacattgtgcccatgatcacttgatgaatctccaacattagatttagatatcat |
45299345 |
T |
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| Q |
114 |
tacaagcatagtcaaaacttgtttcatatttggcctagcatttggtgcctcatttgtacacttcaaaccaatacatagcaattcacccatctcctctgcc |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45299344 |
tacaagcatagtcaaaacttgtttcatatttggcctagcatttggtgcctcatttgtacacttcaaaccaatacatagcaattcacccatctcctctgcc |
45299245 |
T |
|
| Q |
214 |
ccaccaacaagtcttgaacccaaatgactcaacacatga |
252 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
45299244 |
ccaccaacaagtcttgaacccaaatgactcaacacatga |
45299206 |
T |
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