View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7758_high_6 (Length: 249)

Name: NF7758_high_6
Description: NF7758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7758_high_6
NF7758_high_6
[»] chr2 (36 HSPs)
chr2 (155-249)||(26891511-26891605)
chr2 (161-249)||(28863460-28863548)
chr2 (155-249)||(9058479-9058573)
chr2 (155-249)||(33436107-33436201)
chr2 (156-249)||(40613909-40614002)
chr2 (162-249)||(3439985-3440072)
chr2 (155-249)||(7465742-7465836)
chr2 (155-249)||(10249389-10249483)
chr2 (155-249)||(32505655-32505749)
chr2 (156-246)||(43490121-43490211)
chr2 (156-249)||(13438343-13438436)
chr2 (156-249)||(17473020-17473113)
chr2 (156-245)||(17820015-17820104)
chr2 (155-249)||(5574495-5574589)
chr2 (155-249)||(30915462-30915556)
chr2 (156-246)||(38732354-38732444)
chr2 (156-249)||(28381662-28381755)
chr2 (156-245)||(40701478-40701567)
chr2 (161-245)||(19930831-19930915)
chr2 (155-246)||(45097745-45097836)
chr2 (156-249)||(27864704-27864797)
chr2 (174-246)||(2997497-2997569)
chr2 (155-249)||(20700814-20700908)
chr2 (155-249)||(42257192-42257286)
chr2 (155-239)||(38882831-38882914)
chr2 (155-246)||(13365350-13365443)
chr2 (155-249)||(38273149-38273243)
chr2 (156-249)||(4060685-4060778)
chr2 (155-249)||(2533123-2533216)
chr2 (199-249)||(3737986-3738036)
chr2 (155-248)||(36168835-36168928)
chr2 (155-226)||(15428770-15428841)
chr2 (155-221)||(17823783-17823849)
chr2 (161-239)||(41575142-41575220)
chr2 (155-221)||(33436210-33436276)
chr2 (206-246)||(3034993-3035033)
[»] chr3 (40 HSPs)
chr3 (159-249)||(26754698-26754788)
chr3 (156-249)||(53982011-53982104)
chr3 (155-249)||(11907370-11907464)
chr3 (156-249)||(33644200-33644293)
chr3 (160-249)||(52629304-52629393)
chr3 (155-249)||(49607413-49607507)
chr3 (156-249)||(26141539-26141632)
chr3 (155-249)||(27714898-27714992)
chr3 (155-249)||(48375713-48375807)
chr3 (155-245)||(54868906-54868996)
chr3 (156-249)||(8076393-8076486)
chr3 (156-249)||(14623846-14623939)
chr3 (161-249)||(31456694-31456782)
chr3 (155-249)||(17470404-17470498)
chr3 (155-232)||(11095377-11095454)
chr3 (155-235)||(33118872-33118952)
chr3 (156-246)||(45058563-45058652)
chr3 (161-246)||(48587101-48587186)
chr3 (155-249)||(11347929-11348023)
chr3 (155-249)||(41189771-41189865)
chr3 (156-249)||(20764922-20765015)
chr3 (156-249)||(51419367-51419460)
chr3 (161-249)||(13898062-13898150)
chr3 (161-249)||(30801740-30801828)
chr3 (178-246)||(36331339-36331407)
chr3 (155-227)||(36331407-36331479)
chr3 (159-242)||(42823114-42823197)
chr3 (155-241)||(36707439-36707525)
chr3 (155-245)||(1758467-1758559)
chr3 (155-238)||(24699972-24700055)
chr3 (155-237)||(35536625-35536707)
chr3 (156-249)||(47531865-47531958)
chr3 (155-237)||(8956761-8956843)
chr3 (156-238)||(41080709-41080790)
chr3 (155-221)||(21746216-21746284)
chr3 (155-226)||(25395363-25395434)
chr3 (155-229)||(35093584-35093658)
chr3 (182-245)||(47190960-47191022)
chr3 (155-245)||(9562998-9563088)
chr3 (161-214)||(25407190-25407243)
[»] chr1 (33 HSPs)
chr1 (155-249)||(2581914-2582008)
chr1 (155-249)||(32813246-32813340)
chr1 (156-246)||(50591010-50591100)
chr1 (156-245)||(9474887-9474976)
chr1 (155-246)||(5959010-5959101)
chr1 (156-249)||(3000319-3000412)
chr1 (156-249)||(48716289-48716382)
chr1 (155-249)||(38595153-38595247)
chr1 (155-249)||(38632328-38632422)
chr1 (155-249)||(51898690-51898784)
chr1 (156-249)||(6260870-6260963)
chr1 (156-249)||(27564742-27564835)
chr1 (156-249)||(47452327-47452420)
chr1 (155-249)||(8346395-8346489)
chr1 (156-246)||(41608503-41608593)
chr1 (155-249)||(50630457-50630551)
chr1 (157-249)||(44453980-44454072)
chr1 (161-249)||(44548383-44548471)
chr1 (156-249)||(37649198-37649291)
chr1 (156-249)||(48489308-48489393)
chr1 (155-245)||(41758804-41758894)
chr1 (156-249)||(43132-43225)
chr1 (161-249)||(11152385-11152472)
chr1 (155-245)||(45044571-45044661)
chr1 (156-246)||(47748443-47748532)
chr1 (156-249)||(26440734-26440827)
chr1 (186-249)||(13414791-13414854)
chr1 (155-237)||(23597110-23597192)
chr1 (155-221)||(49811562-49811628)
chr1 (156-221)||(3302568-3302633)
chr1 (161-246)||(26274437-26274522)
chr1 (155-246)||(37926448-37926539)
chr1 (155-245)||(7740732-7740822)
[»] chr4 (36 HSPs)
chr4 (156-249)||(6034044-6034137)
chr4 (155-249)||(42044374-42044468)
chr4 (155-249)||(48183056-48183150)
chr4 (155-249)||(50052435-50052529)
chr4 (156-249)||(11511469-11511562)
chr4 (155-246)||(19670726-19670817)
chr4 (155-249)||(480454-480548)
chr4 (156-249)||(41236347-41236440)
chr4 (155-246)||(47986207-47986298)
chr4 (155-246)||(50813902-50813993)
chr4 (156-249)||(50526178-50526271)
chr4 (156-249)||(54473540-54473633)
chr4 (155-246)||(32766957-32767048)
chr4 (155-249)||(29234252-29234346)
chr4 (155-249)||(29239885-29239979)
chr4 (156-249)||(3481654-3481747)
chr4 (174-246)||(17983753-17983825)
chr4 (155-226)||(29547989-29548060)
chr4 (156-239)||(55079731-55079814)
chr4 (155-226)||(55475190-55475261)
chr4 (155-249)||(24995114-24995208)
chr4 (156-249)||(31910192-31910285)
chr4 (156-221)||(40574779-40574844)
chr4 (156-242)||(8343177-8343263)
chr4 (156-226)||(18924525-18924595)
chr4 (155-249)||(23608234-23608328)
chr4 (155-245)||(28480279-28480369)
chr4 (155-245)||(28481154-28481244)
chr4 (155-245)||(28482029-28482119)
chr4 (155-249)||(29977884-29977978)
chr4 (155-229)||(44536773-44536846)
chr4 (155-249)||(48647733-48647827)
chr4 (164-246)||(29589750-29589831)
chr4 (160-248)||(53352574-53352661)
chr4 (200-249)||(41823926-41823975)
chr4 (200-229)||(18769074-18769103)
[»] chr5 (31 HSPs)
chr5 (161-249)||(18520891-18520979)
chr5 (155-246)||(3921275-3921366)
chr5 (156-245)||(28177775-28177864)
chr5 (155-246)||(2252178-2252269)
chr5 (155-249)||(2740273-2740367)
chr5 (155-249)||(36732949-36733043)
chr5 (156-249)||(40145407-40145500)
chr5 (155-245)||(6679697-6679787)
chr5 (163-249)||(13811659-13811745)
chr5 (156-249)||(14831814-14831907)
chr5 (156-249)||(33149645-33149738)
chr5 (156-249)||(42414309-42414402)
chr5 (156-245)||(35785199-35785288)
chr5 (156-249)||(35943899-35943992)
chr5 (155-242)||(39688911-39688998)
chr5 (155-249)||(15409617-15409711)
chr5 (156-249)||(26720516-26720609)
chr5 (156-249)||(26990265-26990358)
chr5 (155-249)||(31008987-31009081)
chr5 (161-215)||(36875644-36875698)
chr5 (200-245)||(21370048-21370093)
chr5 (160-219)||(10356638-10356698)
chr5 (156-221)||(33825359-33825424)
chr5 (204-248)||(31132392-31132436)
chr5 (155-247)||(41470425-41470517)
chr5 (176-249)||(16327921-16327994)
chr5 (174-225)||(10227925-10227976)
chr5 (155-221)||(38296202-38296268)
chr5 (156-249)||(20073523-20073616)
chr5 (155-239)||(9603812-9603896)
chr5 (179-239)||(39557534-39557594)
[»] chr8 (32 HSPs)
chr8 (155-246)||(16383376-16383467)
chr8 (156-249)||(504128-504221)
chr8 (156-249)||(12831047-12831140)
chr8 (156-249)||(15197333-15197426)
chr8 (155-246)||(34307215-34307306)
chr8 (163-249)||(14547929-14548015)
chr8 (155-249)||(15258936-15259030)
chr8 (155-246)||(24307803-24307894)
chr8 (155-249)||(10284638-10284732)
chr8 (155-249)||(37038478-37038572)
chr8 (156-249)||(23122604-23122697)
chr8 (156-249)||(34012303-34012396)
chr8 (156-249)||(40423950-40424043)
chr8 (156-249)||(1179947-1180040)
chr8 (156-249)||(15048189-15048281)
chr8 (156-249)||(43414588-43414681)
chr8 (155-248)||(44507095-44507188)
chr8 (161-245)||(5957835-5957919)
chr8 (156-239)||(14055609-14055692)
chr8 (155-246)||(16056411-16056502)
chr8 (158-249)||(10621094-10621185)
chr8 (155-226)||(24307628-24307699)
chr8 (156-235)||(38229429-38229507)
chr8 (155-249)||(4854870-4854964)
chr8 (175-249)||(8841439-8841513)
chr8 (155-245)||(17443824-17443914)
chr8 (156-226)||(30479504-30479574)
chr8 (155-226)||(32032724-32032794)
chr8 (161-249)||(9122200-9122278)
chr8 (155-221)||(42221514-42221580)
chr8 (156-226)||(20074964-20075034)
chr8 (156-219)||(30183912-30183975)
[»] chr6 (22 HSPs)
chr6 (155-246)||(15990052-15990143)
chr6 (155-246)||(30341370-30341461)
chr6 (156-246)||(15508034-15508124)
chr6 (163-249)||(32869685-32869771)
chr6 (161-249)||(22880665-22880753)
chr6 (156-249)||(17598554-17598647)
chr6 (155-249)||(31976247-31976341)
chr6 (155-249)||(11427615-11427711)
chr6 (155-249)||(6209472-6209566)
chr6 (156-237)||(31953049-31953130)
chr6 (156-246)||(4231548-4231638)
chr6 (168-242)||(31109414-31109488)
chr6 (161-249)||(28536495-28536581)
chr6 (156-249)||(29857827-29857920)
chr6 (155-249)||(31110768-31110860)
chr6 (161-249)||(23128134-23128222)
chr6 (155-245)||(15832576-15832666)
chr6 (160-235)||(9379733-9379808)
chr6 (200-249)||(30870058-30870107)
chr6 (155-226)||(12732481-12732552)
chr6 (155-222)||(22422052-22422119)
chr6 (163-221)||(946383-946441)
[»] chr7 (40 HSPs)
chr7 (155-249)||(7389388-7389482)
chr7 (155-249)||(38837216-38837310)
chr7 (155-246)||(22343360-22343451)
chr7 (155-246)||(41915740-41915831)
chr7 (155-249)||(8080390-8080484)
chr7 (155-249)||(36208172-36208266)
chr7 (155-249)||(36361920-36362014)
chr7 (156-249)||(38267040-38267133)
chr7 (155-246)||(38044196-38044287)
chr7 (155-249)||(3434561-3434655)
chr7 (155-249)||(36362025-36362119)
chr7 (156-249)||(19329842-19329935)
chr7 (156-245)||(35137533-35137622)
chr7 (156-249)||(46374809-46374902)
chr7 (161-249)||(3784000-3784088)
chr7 (156-246)||(8238212-8238303)
chr7 (156-245)||(4999525-4999614)
chr7 (156-245)||(32564437-32564526)
chr7 (155-246)||(7727905-7727996)
chr7 (155-249)||(18207179-18207272)
chr7 (155-249)||(19436194-19436288)
chr7 (155-249)||(40957706-40957800)
chr7 (156-245)||(40846124-40846213)
chr7 (156-246)||(39255934-39256023)
chr7 (156-249)||(21234401-21234494)
chr7 (155-248)||(46033809-46033902)
chr7 (157-249)||(35522877-35522969)
chr7 (156-248)||(41423682-41423774)
chr7 (155-249)||(12310905-12310997)
chr7 (155-221)||(10343598-10343664)
chr7 (161-238)||(2318261-2318338)
chr7 (161-249)||(3694372-3694460)
chr7 (161-249)||(32951500-32951588)
chr7 (155-247)||(26296643-26296735)
chr7 (156-212)||(31735884-31735940)
chr7 (186-249)||(16374831-16374894)
chr7 (155-205)||(11044187-11044237)
chr7 (155-245)||(35468866-35468956)
chr7 (162-226)||(43317566-43317629)
chr7 (202-249)||(27744316-27744363)
[»] scaffold0321 (1 HSPs)
scaffold0321 (155-249)||(10116-10210)
[»] scaffold0018 (1 HSPs)
scaffold0018 (172-245)||(152514-152587)
[»] scaffold0316 (1 HSPs)
scaffold0316 (156-249)||(17058-17147)
[»] scaffold1268 (1 HSPs)
scaffold1268 (156-249)||(936-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (156-249)||(936-1029)
[»] scaffold0237 (1 HSPs)
scaffold0237 (156-249)||(4029-4122)
[»] scaffold0110 (1 HSPs)
scaffold0110 (156-246)||(8873-8963)


Alignment Details
Target: chr2 (Bit Score: 79; Significance: 5e-37; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 26891605 - 26891511
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  26891605 agagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcac 26891511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 28863460 - 28863548
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 28863548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 9058479 - 9058573
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || |||| |||||||||||||||||||    
T  9058479 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcac 9058573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 33436201 - 33436107
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||| || ||||||||||||||||||||||||    
T  33436201 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcac 33436107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 40614002 - 40613909
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcac 40613909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 162 - 249
Target Start/End: Original strand, 3439985 - 3440072
Alignment:
Q  162 tgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| | |||||||||||||||||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcac 3440072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 7465836 - 7465742
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcac 7465742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 10249483 - 10249389
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||||||||||||| |||||||||  | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  10249483 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 10249389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 32505749 - 32505655
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||||||||||||| |||||||||  | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 32505655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 246
Target Start/End: Original strand, 43490121 - 43490211
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 43490211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 13438343 - 13438436
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||||||||||||| ||||||| || | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 13438436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 17473020 - 17473113
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| || |||||||||| |||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcac 17473113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 17820104 - 17820015
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    ||||||||||||||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaa 17820015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 5574589 - 5574495
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||| ||||||||||||||||||| | |||||||||| |||||||||||| || |||||||||| |||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcac 5574495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 30915462 - 30915556
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||||||| || ||||||||||||||| ||||||||    
T  30915462 agagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcac 30915556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 246
Target Start/End: Original strand, 38732354 - 38732444
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    ||||||||||||||| ||||||||| ||| ||||||| |||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 38732444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 28381755 - 28381662
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||| || ||||| ||||| ||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcac 28381662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 40701478 - 40701567
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    |||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||| || || |||||||||||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaa 40701567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 161 - 245
Target Start/End: Complemental strand, 19930915 - 19930831
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    ||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||| || |||| |||||||||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaa 19930831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 45097836 - 45097745
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| ||| ||||||||||||||||| |||| |||||||| ||||||||||||||||||| ||  |||||||||||||||    
T  45097836 agagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaag 45097745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 27864704 - 27864797
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||||||||| |||||||||||||| | |||| |||||||||||||||||| ||  |||||||||||||||| ||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcac 27864797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 2997569 - 2997497
Alignment:
Q  174 acccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  2997569 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2997497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 20700814 - 20700908
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||| ||||| |||||||||||||| | ||| || |||||||||||||||| || ||||||||||||||||| ||||||    
T  20700814 agagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcac 20700908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 42257192 - 42257286
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||| | ||||||||||||||| |  | |||||||||| |||||||||||| |||| ||| ||||||||||||||||||    
T  42257192 agagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcac 42257286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 38882914 - 38882831
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggacccc 239  Q
    ||||| |||||||||||||||||||||||||||||| |||| | |||| |||||||||||||||||| || ||||||||||||||    
T  38882914 agagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccc 38882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 246
Target Start/End: Original strand, 13365350 - 13365443
Alignment:
Q  155 agagttatgatacatagacac--ccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| ||||  |||||| |||||||| |||||| |||||||||||||||||||||||||||  ||  |||||||||||||||    
T  13365350 agagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaag 13365443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 38273243 - 38273149
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||||  ||||| ||||||||||||| |  |||||||||||||||||||||| || | ||| |||||||||||| |||||    
T  38273243 agagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcac 38273149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 4060685 - 4060778
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||||||||||||| |||||||||  | |||| |||||||||||||||||| || || ||||||| |||||| ||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcac 4060778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 2533123 - 2533216
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||| ||||| ||||||||||| || | |||| |||||||||||||||||| || | ||| | ||||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcac 2533216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 3737986 - 3738036
Alignment:
Q  199 gacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcac 3738036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 36168835 - 36168928
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagca 248  Q
    |||||||||||||||||||| |||||| || ||||||| || |  || ||||||||||||| ||||| |||| ||| |||||||||||||||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagca 36168928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 15428841 - 15428770
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtgg 226  Q
    |||||||||||||||| ||| ||||| ||||| ||||||||||  |||| ||||||||||||||||||||||    
T  15428841 agagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgacatgtgg 15428770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 17823783 - 17823849
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgaca 221  Q
    ||||| |||||||||| ||| |||||||||||||||||  |||| ||||||||||||||||||||||    
T  17823783 agagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgaca 17823849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 41575142 - 41575220
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggacccc 239  Q
    |||||||||||||| |||||| ||| ||||||||| | ||||  ||||||||||| ||||||||||||| |||||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccc 41575220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 33436210 - 33436276
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgaca 221  Q
    ||||| |||||||||||||| |||||| ||||||||||||  | |||||||||| ||||||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgaca 33436276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 3035033 - 3034993
Alignment:
Q  206 acacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  3035033 acacaaaaatctgacatgtggtcatatggaccccgcacaag 3034993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 26754698 - 26754788
Alignment:
Q  159 ttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  26754698 ttatgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcac 26754788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 53982011 - 53982104
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 53982104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 11907370 - 11907464
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||||||||||||| |||||||| |||| |||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  11907370 agagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcac 11907464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 33644200 - 33644293
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 33644293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 52629304 - 52629393
Alignment:
Q  160 tatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcac 52629393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 49607413 - 49607507
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || |||||||||| ||| |||||||||    
T  49607413 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcac 49607507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 26141632 - 26141539
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||| |||||||| |||||||| |||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcac 26141539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 27714992 - 27714898
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||||| |||||||| ||||||||| | ||||||||||||||||||||||| || |||| |||||||||||||||||||    
T  27714992 agagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcac 27714898  T

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Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 48375807 - 48375713
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| | | ||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  48375807 agagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcac 48375713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 54868996 - 54868906
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    ||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||| || || |||||||||||||||||    
T  54868996 agagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaa 54868906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 8076393 - 8076486
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||| |||||||||||||||| ||||||| | ||||||||||||||||||| ||| || ||||||||||||||||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcac 8076486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 14623939 - 14623846
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||| ||| ||||||| | |||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcac 14623846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 31456694 - 31456782
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||| |||| |||||||||||| | ||||||||||||||||||||||| || |||| |||||||||||||||||||    
T  31456694 atgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcac 31456782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 17470404 - 17470498
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||||| |||||||||||||||||  |  |||||||||||||||||||||| || |||||||||||||| |||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcac 17470498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 11095454 - 11095377
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgt 232  Q
    ||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || |||||||    
T  11095454 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt 11095377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 33118952 - 33118872
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtgga 235  Q
    |||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||| ||||| || ||||||||||    
T  33118952 agagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtgga 33118872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 45058652 - 45058563
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    ||||||||||||||| ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||  ||  |||||||||||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaataca-cccttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaag 45058563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 48587186 - 48587101
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||| |||||||||||||||||||||| | |||||| ||| |||||||||||| || |||||||||| ||||||||||    
T  48587186 atgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaag 48587101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 11348023 - 11347929
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||| ||||||||| ||||||| || | |||| |||||||||||||||||| |||| ||| ||||||| ||| ||||||    
T  11348023 agagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcac 11347929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 41189865 - 41189771
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||| ||| ||||||||||||||||| |  | |||||||||| |||||| ||||| |||| ||| ||||||||||||||||||    
T  41189865 agagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcac 41189771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 20765015 - 20764922
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||| ||||||||| |||||||||| ||||||| | |  |||||||||||||||||||||| |||| ||| ||||||||| ||||||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcac 20764922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 51419460 - 51419367
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||| |||||| || ||||||| || |  |||||||||||||||||||||| |||| ||| | ||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcac 51419367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 13898150 - 13898062
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||| ||| ||| |||||||||||||||||||||| |||||||||| |||||||||||| ||| ||| ||||||| | |||||||||    
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcac 13898062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 30801828 - 30801740
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||||||||  ||||||||| | || |||||||||||||| |||||||| ||||  |||||||| |||||||||    
T  30801828 atgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcac 30801740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 36331407 - 36331339
Alignment:
Q  178 ttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 36331339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 36331479 - 36331407
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggt 227  Q
    |||||||||||||||| |||||||||| ||||||| ||||||| |||| ||||||||||||||| ||||||||    
T  36331479 agagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctggcatgtggt 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 42823114 - 42823197
Alignment:
Q  159 ttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgca 242  Q
    |||||||||||| ||||| ||| |||| ||||||||||| |||||||||| |||||| |||||||||||||  |||||||||||    
T  42823114 ttatgatacataaacaccattatgtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgca 42823197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 36707525 - 36707439
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgc 241  Q
    ||||| |||||||||||| ||||||||||| |||||||||| | |||| |||||||||||||||||| || || ||||||| |||||    
T  36707525 agagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc 36707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 1758559 - 1758467
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccc--tggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    ||||||||||||||||| || || ||||| ||||||||||||  | |||||||||||||||||||||||| |||| |||||||| || |||||    
T  1758559 agagttatgatacatagtcaaccataggttgcaatacaccccccttgacacccacacaaaaatctgacatatggttacgtggactccacacaa 1758467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 24700055 - 24699972
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccc 238  Q
    ||||| |||||||||||||| |||||| ||||||||||||  | |||||||||| ||||||||| || |||| |||||||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccc 24699972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 35536625 - 35536707
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggacc 237  Q
    ||||| |||||||||||||| ||||| |||||||||||||  | |||||||||| |||||| ||||| ||||||| |||||||    
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggacc 35536707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 47531865 - 47531958
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||| |||||| ||||||||||||  |  ||| |||||||| ||||||||| |||| ||  || |||||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcac 47531958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 8956761 - 8956843
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggacc 237  Q
    ||||| |||||||||||||| ||||| ||||||||||| || | |||||||||| |||||| ||||| ||| ||| |||||||    
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggacc 8956843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 41080709 - 41080790
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccc 238  Q
    |||| |||||||||||||| |||||| | |||| |||||| | ||||||||| ||||||||||| ||||||||| ||||||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtggaccc 41080790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 21746284 - 21746216
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggaca--cccacacaaaaatctgaca 221  Q
    ||||| |||||||||| ||| |||||||||||||||||  ||||||||  |||||||||||||||||||    
T  21746284 agagtaatgatacatatacatccttaggtggcaatacattcctggacacccccacacaaaaatctgaca 21746216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 25395434 - 25395363
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtgg 226  Q
    |||| ||||||||||| ||| ||||| ||||| ||||| ||||  | |||||||||||||||||||||||||    
T  25395434 agagctatgatacataaacatccttatgtggccatacatcccttaatacccacacaaaaatctgacatgtgg 25395363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 35093584 - 35093658
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtca 229  Q
    ||||||| |||||||||||| | ||||||| ||||||| |  | |||| |||| |||||||||||||||||||||    
T  35093584 agagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtca 35093658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 47190960 - 47191022
Alignment:
Q  182 gtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    |||||||||||||| |  |||||||||||||| ||||||||||||| || |||||||| |||||    
T  47190960 gtggcaatacacccttt-acacccacacaaaattctgacatgtggtaacttggaccccacacaa 47191022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 245
Target Start/End: Original strand, 9562998 - 9563088
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    ||||| |||||||||| ||||| |||| || ||||||| || | |||| ||| | |||||||||||| || |||||||||| || ||||||    
T  9562998 agagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaa 9563088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 25407243 - 25407190
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaa 214  Q
    |||||||||| ||| || |||||||||||| |||||| ||||| ||||||||||    
T  25407243 atgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaa 25407190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 2581914 - 2582008
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  2581914 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 2582008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 32813246 - 32813340
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  32813246 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcac 32813340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 50591100 - 50591010
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 50591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 9474976 - 9474887
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    |||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaa 9474887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 5959101 - 5959010
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| ||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||  |||||||||||||||    
T  5959101 agagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 5959010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 3000319 - 3000412
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcac 3000412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 48716382 - 48716289
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||||||||||||||||||||||  | |||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 48716289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 38595153 - 38595247
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||| ||||| |||||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  38595153 agagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcac 38595247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 38632422 - 38632328
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||||||||||||||||||||||  |  ||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  38632422 agagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 38632328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 51898784 - 51898690
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||| | |||||||||||||||||| | ||||||||||||||||||||||| || |||||||||| |||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcac 51898690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 6260870 - 6260963
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||| ||||| | |||||||||| |||||||||||| ||||||||| |||||||| |||||||||||||||||||||||| ||||||    
T  6260870 gagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcac 6260963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 27564835 - 27564742
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcac 27564742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 47452420 - 47452327
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| ||| || |||||||||| |||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcac 47452327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 8346489 - 8346395
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||| |||| |||||||||||||||||  | ||||||||||||||||||||||| || ||||||||||||| ||||||||||    
T  8346489 agagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcac 8346395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 41608593 - 41608503
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    ||||||||||||||| ||| |||||||||||||||||||||| ||||| |||||||||||||||||||||| ||  ||||||||| |||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaag 41608503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 50630457 - 50630551
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||| ||||||||||||||||||| || | |  |||||||||||||||||||| || ||||||||||||||||||||||||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 50630551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 44453980 - 44454072
Alignment:
Q  157 agttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||| ||| ||||||||||| | || || |||||||||||||||||||||||||| ||||||| ||| |||||||||    
T  44453980 agttatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcac 44454072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 44548471 - 44548383
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||| | |||||||||||||||||  | || |||||||||||||||||||| || ||||||||||||||||||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 44548383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 37649198 - 37649291
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||| | |||||||||||||||| | | ||||||||||||||||||||||| ||||||||||| |  ||||||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcac 37649291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 48489308 - 48489393
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||||       ||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  48489308 gagttatgatacatagacac-------tggcaatacaccc-tggacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcac 48489393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 245
Target Start/End: Original strand, 41758804 - 41758894
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    ||||| |||||||||||||||| |||  ||||||||||||| | |||| |||||||||||||||||| || ||||| ||||||||||||||    
T  41758804 agagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaa 41758894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 43132 - 43225
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||  |||||| | ||||||| || | ||||||||||||||||||||||| || ||||||||||| ||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcac 43225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 11152472 - 11152385
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||| |||||||||||||||||| | |||| |||||||||||||||||| || |||| || ||||||||||||||||    
T  11152472 atgaaacatagacacc-ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcac 11152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 45044661 - 45044571
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    |||||||||||||||| |   |||||||||||||||||||  | |||||||| ||||||||||||||||| | ||| ||||||||||||||    
T  45044661 agagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaa 45044571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 156 - 246
Target Start/End: Original strand, 47748443 - 47748532
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    ||||||||||||||| | ||||||||||||||||||| |||| |||||||| | ||||||||||||||||| ||  |||| ||||||||||    
T  47748443 gagttatgatacataaatacccttaggtggcaataca-cccttgacacccatataaaaatctgacatgtggccatatggatcccgcacaag 47748532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 26440734 - 26440827
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||| |||| ||||||| |||||| || |||||||||| |  |||||||||||||||||||||| |||| ||| |||| |||||| ||||||    
T  26440734 gagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcac 26440827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 13414791 - 13414854
Alignment:
Q  186 caatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||| | ||||||||||||||||||| ||| || |||||||||||||| |||||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcac 13414854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 23597192 - 23597110
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggacc 237  Q
    ||||| |||||||||||||| | |||||||||||||||| | | || ||||||| |||||||||||| |||| ||||| ||||    
T  23597192 agagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgacc 23597110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 49811628 - 49811562
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgaca 221  Q
    |||||||||||| ||||||| ||||||||| |||||||||  | |||| ||||||||||||||||||    
T  49811628 agagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgaca 49811562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 3302633 - 3302568
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgaca 221  Q
    |||| |||||||||| ||| ||||||||| ||||| |  |||||||||||||||||||||||||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgaca 3302568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 26274437 - 26274522
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||||||| ||||||||||| |  | |||| ||||| ||||||||||||  | |||||||||| || |||||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaag 26274522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 37926539 - 37926448
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||||| | | ||||||||||||||| |  |  ||||||||| |||||||||||| |||| ||| |||| |||| |||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaag 37926448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 245
Target Start/End: Original strand, 7740732 - 7740822
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    ||||||||||||||| |||| ||||| ||| ||||||| || | |||||| ||| |||||| ||||| ||||  | ||||||||| |||||    
T  7740732 agagttatgatacattgacaaccttatgtgacaatacatccattgacacctacataaaaatatgacacgtggctatgtggaccccacacaa 7740822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 5e-34; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 6034044 - 6034137
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcac 6034137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 42044468 - 42044374
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  42044468 agagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 42044374  T

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Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 48183150 - 48183056
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  48183150 agagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 48183056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 50052529 - 50052435
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  50052529 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 50052435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 11511562 - 11511469
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| || ||||||||||||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcac 11511469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 19670817 - 19670726
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||  |||||||||||||||    
T  19670817 agagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaag 19670726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 480548 - 480454
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  480548 agagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcac 480454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 41236347 - 41236440
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||||||||||||||||||||||  | |||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 41236440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 155 - 246
Target Start/End: Original strand, 47986207 - 47986298
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||| ||  |||||||||||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaag 47986298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 50813993 - 50813902
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||  || ||||||||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaag 50813902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 50526271 - 50526178
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||| | |||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcac 50526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 54473633 - 54473540
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||||||||||||| |||||||||  | ||||||||||||||||||| ||| || ||||||||||||||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcac 54473540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 246
Target Start/End: Original strand, 32766957 - 32767048
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||  ||||||| |||||||    
T  32766957 agagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaag 32767048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 29234346 - 29234252
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||||||||| ||||||||||||| | || |||  ||||||||||||||| || ||||||||||||||||||||||||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 29234252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 29239885 - 29239979
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||||||||||||||||||||||  | |||| |||||||||||||| ||| || |||||||||||||| |||||||||    
T  29239885 agagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcac 29239979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 3481654 - 3481747
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||||| |||||||||||||||| | | |||||||||||||||||||||||  | |||||||||||||| |||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcac 3481747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 17983825 - 17983753
Alignment:
Q  174 acccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  17983825 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 17983753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 29548060 - 29547989
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtgg 226  Q
    |||||||||||||||| ||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  29548060 agagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtgg 29547989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 55079814 - 55079731
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggacccc 239  Q
    ||||||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||||||| ||  ||||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggacccc 55079731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 55475190 - 55475261
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtgg 226  Q
    |||||||||||||||| ||| |||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  55475190 agagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtgg 55475261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 24995208 - 24995114
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||| || ||||||||||| ||||||||||||| | |||||||||| |||||| ||||| || ||||||||||||||||||||||||    
T  24995208 agagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcac 24995114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 31910192 - 31910285
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||| ||||||||| |||||||| | | |||||||||||||||||||||||  | | ||| ||||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcac 31910285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 40574779 - 40574844
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgaca 221  Q
    ||||||||||||||||||| |||||||||| ||||||||| | |||||||||||||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgaca 40574844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 156 - 242
Target Start/End: Complemental strand, 8343263 - 8343177
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgca 242  Q
    ||||||||||||||| ||| ||||||||||||||||| || | |||||| ||| ||||||||||||||||| ||  |||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgca 8343177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 18924595 - 18924525
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtgg 226  Q
    |||||||||| |||| | |||||||||||||||||||||||| || | |||||||||||||||||||||||    
T  18924595 gagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgacatgtgg 18924525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 23608234 - 23608328
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||| |||||||||||||| || |||||||||  | ||||||||||||||||||||||| || |||||||| || || |||||||||    
T  23608234 agagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcac 23608328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 28480369 - 28480279
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    |||||||| ||||||||||| ||||||||| ||||||||  ||  |||| |||||||||||||||||||| |||| ||||||||| |||||    
T  28480369 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaa 28480279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 28481244 - 28481154
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    |||||||| ||||||||||| ||||||||| ||||||||  ||  |||| |||||||||||||||||||| |||| ||||||||| |||||    
T  28481244 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaa 28481154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 28482119 - 28482029
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    |||||||| ||||||||||| ||||||||| ||||||||  ||  |||| |||||||||||||||||||| |||| ||||||||| |||||    
T  28482119 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaa 28482029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 29977884 - 29977978
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||| | | || |||||||||||||||||||  |||||||||||||||||||||| || ||||  |||||||| |||||||||    
T  29977884 agagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcac 29977978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 44536846 - 44536773
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtca 229  Q
    |||||||||||||||| ||||  ||||||||||||||| |||| |||| ||||||||||||||||||||||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaataca-cccttgacatccacacaaaaatctgacatgtggtca 44536773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 48647827 - 48647733
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||| ||||| ||| ||||||||  ||||||||| ||  ||||||||| |||||||| ||| |||||||||||||| ||||||||||||    
T  48647827 agagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcac 48647733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 29589831 - 29589750
Alignment:
Q  164 atacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    ||||||| |||||||||| || |||||||||||| ||||||||||||||||||||| |||||| ||  |||||||| ||||||    
T  29589831 atacataaacacccttagttg-caatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaag 29589750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 248
Target Start/End: Complemental strand, 53352661 - 53352574
Alignment:
Q  160 tatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagca 248  Q
    ||||||||||||||||||||||||| |||||||  | |  ||||| |||||||||||||||| || || | ||||||||||||||||||    
T  53352661 tatgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagca 53352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 41823926 - 41823975
Alignment:
Q  200 acacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  41823926 acacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcac 41823975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 229
Target Start/End: Complemental strand, 18769103 - 18769074
Alignment:
Q  200 acacccacacaaaaatctgacatgtggtca 229  Q
    ||||||||||||||||||||||||||||||    
T  18769103 acacccacacaaaaatctgacatgtggtca 18769074  T

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Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 18520979 - 18520891
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  18520979 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 18520891  T

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Target: chr5; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 3921366 - 3921275
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  3921366 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 3921275  T

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Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 28177775 - 28177864
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    ||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaa 28177864  T

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Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 2252269 - 2252178
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2252178  T

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Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 2740273 - 2740367
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| || |||||||||| |||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcac 2740367  T

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Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 36733043 - 36732949
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  36733043 agagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcac 36732949  T

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Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 40145407 - 40145500
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||||||||||||||||||||||| |  ||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 40145500  T

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Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 245
Target Start/End: Original strand, 6679697 - 6679787
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    |||||||||||||||||||| | |||||||||||||||||  | ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaa 6679787  T

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Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 13811659 - 13811745
Alignment:
Q  163 gatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||||||||||||| |  | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  13811659 gatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 13811745  T

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Target: chr5; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 14831814 - 14831907
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||| ||||||||||||||||||| | |||||||||| |||||||||||| || |||||||||| |||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcac 14831907  T

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Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 33149738 - 33149645
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||| || |||||||||| |||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcac 33149645  T

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Target: chr5; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 42414402 - 42414309
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||||  ||||||||||||||||| | ||||||||||||||||||||||| || |||| |||||||||||||||||||    
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcac 42414309  T

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Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 35785199 - 35785288
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    |||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||| || || ||||||| |||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaa 35785288  T

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Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 35943992 - 35943899
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||||||||||||||||||||| |  | ||||||||||||||||||||||| || || ||||||| ||| |||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcac 35943899  T

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Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 39688998 - 39688911
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgca 242  Q
    |||||||||||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||||| |||||||||  || ||||||||    
T  39688998 agagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgca 39688911  T

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Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 15409711 - 15409617
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||| ||||||||| |||||||  | | ||||||||||||||||||||||| || | ||| ||||||||||||||||||    
T  15409711 agagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcac 15409617  T

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Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 26720516 - 26720609
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||| |||||||||||||||||||| |  ||||| ||| |||||||||||| |||| ||| |||| |||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcac 26720609  T

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Target: chr5; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 26990265 - 26990358
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||| |||||||||||||||||||| |  ||||| ||| |||||||||||| |||| ||| |||| |||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcac 26990358  T

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Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 31008987 - 31009081
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||| ||| ||||||||| |||||||  | |  |||||||||||||||||||||| || |||||||||| |||||||||||||    
T  31008987 agagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcac 31009081  T

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Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 36875698 - 36875644
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaat 215  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  36875698 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

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Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 21370048 - 21370093
Alignment:
Q  200 acacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaa 21370093  T

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Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 10356638 - 10356698
Alignment:
Q  160 tatgatacatagacacccttaggtggcaataca-cccctggacacccacacaaaaatctga 219  Q
    ||||||||||||||| ||||||||||||||||| ||| | |||||||||||||||||||||    
T  10356638 tatgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 33825424 - 33825359
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgaca 221  Q
    |||| ||||| ||||||||  ||||||||||||||||| ||| |||||||||| ||||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgaca 33825359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 31132392 - 31132436
Alignment:
Q  204 ccacacaaaaatctgacatgtggtcacgtggaccccgcacaagca 248  Q
    |||||||||||||||||| || |||||||||||||||||||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagca 31132436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 247
Target Start/End: Complemental strand, 41470517 - 41470425
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagc 247  Q
    ||||| || ||||||||||||| ||||||||||||||| || |  | |  || | |||||||||||| || ||||||||||||||||||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 16327921 - 16327994
Alignment:
Q  176 ccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||| || | |||||||||| |||||||||||| ||| ||| ||| ||| | |||||||||    
T  16327921 ccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcac 16327994  T

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Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 10227976 - 10227925
Alignment:
Q  174 acccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtg 225  Q
    ||||||| ||||||||||| |||| |||||| | ||||||||||||||||||    
T  10227976 acccttatgtggcaatacatcccttgacaccgatacaaaaatctgacatgtg 10227925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 38296202 - 38296268
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgaca 221  Q
    |||||||||||||||||||   |||||||| ||||||||| ||  | ||||||||||||||| ||||    
T  38296202 agagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagaca 38296268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 20073616 - 20073523
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||| ||||||| | |||| || |||||||||| | ||||| |||| ||||||||  || |||  ||||||||||| ||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcac 20073523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 9603812 - 9603896
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggacccc 239  Q
    ||||| |||||||||| ||| |||||||||  ||||||| | |  ||||| ||||||||||||||||  ||||||  ||||||||    
T  9603812 agagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggacccc 9603896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 39557594 - 39557534
Alignment:
Q  179 taggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggacccc 239  Q
    ||||||| |||||||| ||  ||| |||||||||||||||||| ||| |||| ||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggacccc 39557534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 155 - 246
Target Start/End: Original strand, 16383376 - 16383467
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  16383376 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16383467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 504221 - 504128
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 504128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 12831047 - 12831140
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 12831140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 15197333 - 15197426
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 15197426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 246
Target Start/End: Original strand, 34307215 - 34307306
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  || ||||||||||||    
T  34307215 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaag 34307306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 14547929 - 14548015
Alignment:
Q  163 gatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  14547929 gatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 14548015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 15259030 - 15258936
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||| || ||||| |||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  15259030 agagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcac 15258936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 24307894 - 24307803
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||| |||||| ||  |||||||||||||||    
T  24307894 agagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaag 24307803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 10284732 - 10284638
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||||||||| ||| |||||||| | | ||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  10284732 agagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcac 10284638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 37038478 - 37038572
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||| | |||||||||||||||||| | ||||||||||||||||||||||| || |||||||||| |||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcac 37038572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 23122697 - 23122604
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||||||||| |||||||||||||  | ||||||||||||||||||||||| || ||||||||||||||||| ||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcac 23122604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 34012396 - 34012303
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||| || |||||||||| |||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcac 34012303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 40424043 - 40423950
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||| |||||||||||||||||||||| | |||| |||||||||||||||||| || |||| |||||||||||||||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcac 40423950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 1180040 - 1179947
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||| || |||| |||||  ||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcac 1179947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 15048281 - 15048189
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||| |||||||||||||||||||| | |||| |||||||||||||||||| || | ||| ||||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacgtagccacatggaccccgcacaagcac 15048189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 43414681 - 43414588
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||| |||||| |||||| |||||| | ||||||||||||||||||| ||| |||||||| |||| |||||||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcac 43414588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 44507188 - 44507095
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagca 248  Q
    ||||| ||||||||||||||||||||||||| ||||||| | |  |||||||||||||||||||||| || ||||||||||||||| |||||||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagca 44507095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 5957835 - 5957919
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    ||||||||||||||  ||||||||||||||||||| | ||||||||||||||||||||||| || |||||||||| |||||||||    
T  5957835 atgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaa 5957919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 14055692 - 14055609
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggacccc 239  Q
    |||||||||||||| |||||||||||||| |||||||| ||| |||| |||||||||||||| |||||| ||||||||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggacccc 14055609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 16056502 - 16056411
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| ||| ||||| ||| ||||||| |||| |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  16056502 agagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16056411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 10621185 - 10621094
Alignment:
Q  158 gttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||| |||||||||| ||||||||| | ||||||||||||||||||||||| || | ||| | || |||||||||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcac 10621094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 24307628 - 24307699
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtgg 226  Q
    |||||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||||||| ||||||    
T  24307628 agagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctgatatgtgg 24307699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 38229429 - 38229507
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtgga 235  Q
    ||||||||||||||  |||| ||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||    
T  38229429 gagttatgatacatgaacactcttaggtggcaatacgctcctg-acacccacacaaaaatctgacatgtggtcacgtgga 38229507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 4854964 - 4854870
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||| |||||||||||||||||||| |  ||||| ||| |||||||||| |||||| ||| ||||||| ||||||||||    
T  4854964 agagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcac 4854870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 8841513 - 8841439
Alignment:
Q  175 cccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||| ||||||| | ||||||||||||||||||| ||| || ||||||||||||||||||||||||    
T  8841513 cccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcac 8841439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 245
Target Start/End: Original strand, 17443824 - 17443914
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    |||||||||||||||||||| ||||||||| ||||||||  ||  |||| |||||||||||||||||||| |||| ||||||||| |||||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaa 17443914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 30479574 - 30479504
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtgg 226  Q
    ||||||||||||||| |||||||||||||||||||||||| | |||| ||||| |||||||||||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtgg 30479504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 32032724 - 32032794
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtgg 226  Q
    |||||||||||||||| |||||||||||||||||||||  ||| |||| |||||||||||||||||||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaataca-tccttgacatccacacaaaaatctgacatgtgg 32032794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 9122200 - 9122278
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||||||||||||||||          ||||||||||||||||||||| |||||||||| |||||||||||||    
T  9122200 atgatacatagacacccttaggtggcaatacac----------ccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcac 9122278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 42221514 - 42221580
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgaca 221  Q
    ||||| |||||||||| ||| ||||||||| |||||||  |||||||||||||||||||||||||||    
T  42221514 agagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgaca 42221580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 20075034 - 20074964
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtgg 226  Q
    |||| |||||||||||||| |||||||||||||||||| | | |||||||||| |||||| ||||| ||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgtgg 20074964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 30183975 - 30183912
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctga 219  Q
    |||| |||||||||| ||| ||||| |||||||||||  ||||||||| || ||||||||||||    
T  30183975 gagtaatgatacatatacatccttacgtggcaatacattcctggacactcatacaaaaatctga 30183912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 7e-33; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 15990143 - 15990052
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  15990143 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15990052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 30341461 - 30341370
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  30341461 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 30341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 15508124 - 15508034
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15508034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 32869685 - 32869771
Alignment:
Q  163 gatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  32869685 gatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 32869771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 22880753 - 22880665
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||| || ||||||||||||||||||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcac 22880665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 17598554 - 17598647
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||||||||||||||||||||| |  | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcac 17598647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 31976247 - 31976341
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||| ||||||||||||||| |||| |  |||||||||||||||||||||| |||||||| || |||||||||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcac 31976341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 11427615 - 11427711
Alignment:
Q  155 agagttatgatacatagacaccct--taggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||||||  |||||||||||||| || | ||||||||||||||||||||||| || |||||||||| |||||||||||||    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcac 11427711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 6209566 - 6209472
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||||||||||||||||||||||   | ||||| |||||||||||||| || || |||||||||||||||||| |||||    
T  6209566 agagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcac 6209472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 31953130 - 31953049
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggacc 237  Q
    |||| |||||| ||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||| ||| |||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacc 31953049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 156 - 246
Target Start/End: Original strand, 4231548 - 4231638
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||| |||| ||| | |||||||||||||||||||| | ||||||||||||||||||||| |||| ||  |||||||||||||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaag 4231638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 31109488 - 31109414
Alignment:
Q  168 atagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgca 242  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||||||||| || ||||||| |||||||||    
T  31109488 atagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgca 31109414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 28536581 - 28536495
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||| ||| ||||||||||||||||| |||| |||||||||||||||||||||||   ||||| ||||||||| |||||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgaca--cggtcatgtggaccccacacaagcac 28536495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 29857827 - 29857920
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||||| |||| ||||||||||||  |  |||||||||||||||||||||| || || ||||||| |||||| ||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcac 29857920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 31110860 - 31110768
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||| |||||||||||||||||||| | ||||  | ||||||||||||||| ||   ||| ||||||| ||||||||||    
T  31110860 agagttatgatacatagacatccttaggtggcaatacaccctttgaca--ctcacaaaaatctgacacgtaaccacatggaccctgcacaagcac 31110768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 23128222 - 23128134
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||| ||||||||| ||| |||  |||||| || | ||||||||||||||||||||||| || |||||||||| ||| |||||||||    
T  23128222 atgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcac 23128134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 245
Target Start/End: Original strand, 15832576 - 15832666
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    ||||| |||||||||||||||| ||||||| ||||| | |  | ||||||||||||||||| ||||| || |||||||||| || ||||||    
T  15832576 agagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 9379808 - 9379733
Alignment:
Q  160 tatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtgga 235  Q
    ||||||||||||||| |||||| || ||||||| |||| |||||||| |||||||| ||||| |||| || |||||    
T  9379808 tatgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtgga 9379733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 30870058 - 30870107
Alignment:
Q  200 acacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||| | |||||||| |||||||||||| ||||||||||||||||||    
T  30870058 acacccatataaaaatctaacatgtggtcacatggaccccgcacaagcac 30870107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 12732481 - 12732552
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtgg 226  Q
    ||||| ||||||||||||||  |||| ||||||||| |  | | ||||||||||||||||||||||| ||||    
T  12732481 agagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtgg 12732552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 22422119 - 22422052
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacat 222  Q
    ||||| |||||||||||||| ||||||||||||||| | | || ||||| || |||||| ||||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgacat 22422052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 946383 - 946441
Alignment:
Q  163 gatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgaca 221  Q
    |||||||||||| |||||||||  ||||||||| | |||||| || |||||||||||||    
T  946383 gatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgaca 946441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 7389388 - 7389482
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  7389388 agagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 7389482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 38837216 - 38837310
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  38837216 agagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 38837310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 246
Target Start/End: Original strand, 22343360 - 22343451
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||  |||||||||||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaag 22343451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 246
Target Start/End: Original strand, 41915740 - 41915831
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||  |||||||||||||||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaag 41915831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 8080484 - 8080390
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||||||||||||||||||||||| | |||||| ||| |||||||||||| || ||||||||||||||||||||||||    
T  8080484 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcac 8080390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 36208172 - 36208266
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||||||||||||||| ||||||  | | |||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  36208172 agagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcac 36208266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 36362014 - 36361920
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcac 36361920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 38267040 - 38267133
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||||||||| ||| |||||||||| | ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 38267133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 155 - 246
Target Start/End: Original strand, 38044196 - 38044287
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||| | ||  |||||||||||||||    
T  38044196 agagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaag 38044287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 3434561 - 3434655
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||| |||||||||||||||||||| | |||||||||||||||| |||||| || |||||||||| |||||||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcac 3434655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 36362025 - 36362119
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||||||||||||| |||||| || | ||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcac 36362119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 19329842 - 19329935
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcac 19329935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 35137533 - 35137622
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    |||| |||||| |||||||||||||||||||||||||||| | ||||||||||||||||||| ||| || ||||||||||||||||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaa 35137622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 46374902 - 46374809
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||| ||||||||||||| |||||| |  |||||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcac 46374809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 3784000 - 3784088
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||||||||||||||| |  | ||||||||||||||||||||||| || |||||||||| |||||||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcac 3784088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 246
Target Start/End: Original strand, 8238212 - 8238303
Alignment:
Q  156 gagttatgatacatagacaccct-taggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    ||||||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||||||||||||| ||||  |||||||||||||||    
T  8238212 gagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaag 8238303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 4999614 - 4999525
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    |||| ||||||||||||||||||||| ||||||||||||  | ||||||||||||||||||||| | || ||||||||||||||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaa 4999525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 32564526 - 32564437
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    ||||||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||  |  ||||||||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaa 32564437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 246
Target Start/End: Original strand, 7727905 - 7727996
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    |||||||||||||||| |||||||||||||| |||||||| || ||||  |||| ||||||||||||||||||||  |||||||||||||||    
T  7727905 agagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaag 7727996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 18207179 - 18207272
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||| ||||||||||||||||||| || |||||||| |||||||||| ||| |||| |||||| ||||| |||||||||    
T  18207179 agagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcac 18207272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 19436288 - 19436194
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| |||||||||||||| ||||||||| |||||||||  | ||||||||||||||||||||||| || |||||||||| |||||| ||||||    
T  19436288 agagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcac 19436194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 40957706 - 40957800
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||| ||||||||||||||| ||||||||||||||||| | | || |||||||||||||||||||| || |||||||||| |||| ||||||||    
T  40957706 agagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcac 40957800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 40846213 - 40846124
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||| |||||||||||||| |||||| || |  ||||||||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaa 40846124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 39256023 - 39255934
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    ||||||||||||||||||| ||||||||||||||||||| || || ||||| |||||||||||||| |||| ||||||||| || ||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtgg-cacgtggactccacacaag 39255934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 21234401 - 21234494
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||| ||||||||| |||||||||| | ||||| ||||||||||| ||||| || | ||| || |||||||||||||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcac 21234494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 46033902 - 46033809
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagca 248  Q
    |||||||||||||||||| |  ||||||||||||||||||| |  ||||||||| |||||||||||| |||||||| || || |||||||||||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagca 46033809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 35522877 - 35522969
Alignment:
Q  157 agttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||| ||||| |||||||||||||  |  |||||||||||||||||||||| |||| ||  |||| |||||||||||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcac 35522969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 156 - 248
Target Start/End: Original strand, 41423682 - 41423774
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagca 248  Q
    ||||||||||||||||||| | |||| ||| |||||||| || |||||  ||||||||||||||||||||||||||| || |||| |||||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagca 41423774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 12310905 - 12310997
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||||||||||||||| |||| |   ||||| | ||| |||||||||||||||||||||||||||| || | ||||||||    
T  12310905 agagttatgatacatagacacccttaggtggaaatata--tctggatatccatacaaaaatctgacatgtggtcacgtggatcctgaacaagcac 12310997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 10343664 - 10343598
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgaca 221  Q
    ||||| ||||||||||||||||||||||||| |||||||  || |||||||||||||||||||||||    
T  10343664 agagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgaca 10343598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 238
Target Start/End: Complemental strand, 2318338 - 2318261
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccc 238  Q
    |||||||||  ||| || |||||||||| ||||| || |||||||||||||||||||||| |||||||||||||||||    
T  2318338 atgatacattaacaaccataggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggaccc 2318261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 3694372 - 3694460
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||| ||| ||||||||||||| |||||||||  |  |||||||||||||||||||||| || |||| ||||| |||||||||||||    
T  3694372 atgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcac 3694460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 32951588 - 32951500
Alignment:
Q  161 atgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||| ||||| || ||||||| || |  ||| |||||||||||||| ||| || ||||||||||||||||||||||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcac 32951500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 247
Target Start/End: Original strand, 26296643 - 26296735
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagc 247  Q
    |||||||||||||||||||| ||||||||| ||||| |||| |  ||| ||||| |||||||||| | |||| ||  ||||||||||||||||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagc 26296735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 31735884 - 31735940
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaa 212  Q
    ||||||||||||||||||| |||||||||||||||||| | |  |||||||||||||    
T  31735884 gagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaaa 31735940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 16374894 - 16374831
Alignment:
Q  186 caatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||| |||| |||| |||||||||||||||||| ||||||||||||| | | |||||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcac 16374831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 11044187 - 11044237
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacaccc 205  Q
    ||||| |||||||||||||||||||||||||||||||| || | |||||||    
T  11044187 agagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc 11044237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 35468956 - 35468866
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    ||||| |||||||||||||| |||||| |||||||||| |  | |||||||||| |||||||| | |||||  || |||||||| ||||||    
T  35468956 agagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaa 35468866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 43317629 - 43317566
Alignment:
Q  162 tgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtgg 226  Q
    ||||||||  ||||||||  ||||||||||||||||  |||||||||||||| ||||||||||||    
T  43317629 tgatacatgtacacccttgtgtggcaatacacccctt-acacccacacaaaattctgacatgtgg 43317566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 27744363 - 27744316
Alignment:
Q  202 acccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    ||||||||||||||||||||||||| |||||||| ||| || ||||||    
T  27744363 acccacacaaaaatctgacatgtggccacgtggatccctcataagcac 27744316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 10210 - 10116
Alignment:
Q  155 agagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||||||||||||||| ||||||||||||||| || | |||| ||||| |||||||||||| || |||||||||||| || ||||||||    
T  10210 agagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcac 10116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 152514 - 152587
Alignment:
Q  172 acacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaa 245  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||  |||| |||||||||    
T  152514 acacccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaa 152587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 17058 - 17147
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||||||||| ||||||||    ||||| |||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  17058 gagttatgattcatagaca----taggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcac 17147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 1029 - 936
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||| | |||||||||||||||||| |  ||| ||||||||||| |||||| || |||||||| | |||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcac 936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 1029 - 936
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||| | |||||||||||||||||| |  ||| ||||||||||| |||||| || |||||||| | |||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcac 936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 4029 - 4122
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaagcac 249  Q
    |||| |||||||||||||||| |||| ||||||||||||  |  |||||||||||||||||||||| || || ||||||| |||||| ||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcac 4122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 8963 - 8873
Alignment:
Q  156 gagttatgatacatagacacccttaggtggcaatacacccctggacacccacacaaaaatctgacatgtggtcacgtggaccccgcacaag 246  Q
    ||||||||||| ||||||| ||||| ||| ||||||||   | |||| | |||||||||| |||||  | |||||||||||||| ||||||    
T  8963 gagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaag 8873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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