View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7758_low_1 (Length: 933)

Name: NF7758_low_1
Description: NF7758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7758_low_1
NF7758_low_1
[»] chr2 (13 HSPs)
chr2 (11-543)||(14007430-14007964)
chr2 (720-852)||(14007299-14007436)
chr2 (124-234)||(45035155-45035265)
chr2 (247-348)||(20957437-20957538)
chr2 (124-233)||(45033361-45033470)
chr2 (247-345)||(20957612-20957710)
chr2 (124-232)||(17308689-17308797)
chr2 (124-199)||(1015756-1015831)
chr2 (130-236)||(3372458-3372564)
chr2 (237-345)||(17149055-17149163)
chr2 (865-918)||(14006918-14006971)
chr2 (139-242)||(33187188-33187291)
chr2 (124-194)||(30191620-30191690)
[»] chr3 (12 HSPs)
chr3 (130-348)||(26667004-26667223)
chr3 (220-348)||(25836367-25836495)
chr3 (124-228)||(27682197-27682301)
chr3 (124-199)||(41874545-41874620)
chr3 (124-228)||(28133726-28133830)
chr3 (238-345)||(9032830-9032937)
chr3 (251-348)||(548092-548187)
chr3 (124-234)||(4602293-4602403)
chr3 (246-314)||(43819944-43820012)
chr3 (124-234)||(4609105-4609215)
chr3 (131-228)||(26317951-26318048)
chr3 (193-234)||(27972591-27972632)
[»] chr5 (12 HSPs)
chr5 (123-348)||(6742425-6742653)
chr5 (124-234)||(10410798-10410908)
chr5 (237-348)||(4897423-4897532)
chr5 (251-358)||(21637272-21637381)
chr5 (135-234)||(10412371-10412470)
chr5 (220-341)||(33689869-33689990)
chr5 (124-228)||(8081508-8081612)
chr5 (124-199)||(25725808-25725883)
chr5 (239-348)||(33688153-33688262)
chr5 (124-199)||(25502025-25502100)
chr5 (124-231)||(25506938-25507045)
chr5 (130-197)||(40382763-40382830)
[»] chr8 (7 HSPs)
chr8 (124-346)||(35674837-35675058)
chr8 (124-242)||(30634229-30634347)
chr8 (137-229)||(35673345-35673437)
chr8 (248-345)||(29456284-29456381)
chr8 (124-199)||(1175148-1175223)
chr8 (132-229)||(1173513-1173610)
chr8 (313-348)||(35673477-35673512)
[»] chr7 (10 HSPs)
chr7 (237-348)||(29598097-29598208)
chr7 (237-358)||(21633313-21633436)
chr7 (131-199)||(29924665-29924733)
chr7 (237-358)||(21631352-21631467)
chr7 (237-348)||(21631122-21631225)
chr7 (131-216)||(21464528-21464615)
chr7 (219-300)||(3232944-3233025)
chr7 (247-341)||(21633093-21633179)
chr7 (273-358)||(9878298-9878384)
chr7 (251-300)||(29856101-29856150)
[»] chr6 (6 HSPs)
chr6 (239-348)||(30488432-30488541)
chr6 (123-242)||(15689026-15689145)
chr6 (275-348)||(25050859-25050932)
chr6 (152-284)||(9373599-9373730)
chr6 (131-242)||(34350341-34350452)
chr6 (268-348)||(26857816-26857895)
[»] chr4 (11 HSPs)
chr4 (220-345)||(42664932-42665057)
chr4 (130-234)||(28395559-28395667)
chr4 (237-344)||(10032679-10032785)
chr4 (276-348)||(42665175-42665247)
chr4 (237-348)||(18812662-18812774)
chr4 (123-191)||(4847687-4847755)
chr4 (275-358)||(18807515-18807599)
chr4 (247-298)||(5653307-5653358)
chr4 (237-348)||(8818744-8818853)
chr4 (308-347)||(19223142-19223181)
chr4 (234-312)||(8678562-8678640)
[»] scaffold0060 (1 HSPs)
scaffold0060 (248-358)||(9093-9205)
[»] chr1 (6 HSPs)
chr1 (237-344)||(1284831-1284937)
chr1 (123-242)||(44782182-44782301)
chr1 (124-228)||(46679708-46679812)
chr1 (237-323)||(33072760-33072845)
chr1 (237-347)||(10653488-10653594)
chr1 (253-348)||(41892084-41892178)
[»] scaffold0245 (2 HSPs)
scaffold0245 (237-344)||(9476-9582)
scaffold0245 (237-344)||(11098-11204)
[»] scaffold0229 (1 HSPs)
scaffold0229 (237-344)||(9804-9910)
[»] scaffold0160 (1 HSPs)
scaffold0160 (265-345)||(28412-28492)


Alignment Details
Target: chr2 (Bit Score: 445; Significance: 0; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 11 - 543
Target Start/End: Complemental strand, 14007964 - 14007430
Alignment:
Q  11 acattattctaaacatcta--gagaaactagaacacgttatttctctcaacatggtcatttttgtttgatatatcattcaagttgtagtttaactaattg 108  Q
    |||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14007964 acattattctaaacatctaaagagaaactagaacatgttatttctctcaacatggtcatttttgtttgatatatcattcaagttgtagtttaaccaattg 14007865  T
Q  109 atagaagattgcatgtgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaa 208  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||   |||| |    
T  14007864 atagaagattgcatgtgttatgaatcaaaggattccatggttctaggtcaaatgcaatggaaagatggattgtctaattctctctaggagt---gacata 14007768  T
Q  209 gatagaaatgaataaaagatatgaaaatagtacaatgatgagagttatttataggggtgagt----tagtctaactaactcttaactacctaaccagcca 304  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||    |||||||||||||||||||||||||||||| |||    
T  14007767 gatagaaatgaataaaagatataaaaatagtacaatggtgagagttatttatatgggtgagtaagttagtctaactaactcttaactacctaaccaacca 14007668  T
Q  305 actaaccatagtttacatattaactaactatggtttattcactactctaatagtatgcttaatttgttccatgcttatctaattatactttgtctactct 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14007667 actaaccatagtttacatattaactaactatggtttattcactactctaatagtatgcttaatttgttccatgcttatctaattatactttgtctactct 14007568  T
Q  405 ctacatttcctcttggattttttcatttcttaacaaacatgcacgttggtgatgtcattaagtcatataccctcttttgcttgtactgattttgttcatc 504  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14007567 ctacatttcctcttggattttttcatttcttaacaaacatgcacgttggtgatgtcattaagtcatat-ccctcttttgcttgtactgattttgttcatc 14007469  T
Q  505 ttccatcgaatcctgatgaaagactaacattgttacatg 543  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  14007468 ttccatcgaatcctgctgaaagactaacattgttacatg 14007430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 720 - 852
Target Start/End: Complemental strand, 14007436 - 14007299
Alignment:
Q  720 ttacatggaaatgtcnnnnnnnaatagtgattcttgttggatacaatataaa-------ccacacatgcagaaggtctcaagaaccttaatgatatcttg 812  Q
    |||||||||||||||       ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||  ||||    
T  14007436 ttacatggaaatgtctttttttaatagtgattcttgttggatacaatataaattataaaccacacatgcagaaggtctcaagaaccttaatgat--cttg 14007339  T
Q  813 tatctcacactaaatttatgagtaactgatgttcaattat 852  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14007338 tatctcacactaaatttatgagtaactgatgttcaattat 14007299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 45035265 - 45035155
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataa 223  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||||||| |||||| || |||||||||||||| || ||||||||  ||||||||||    
T  45035265 tgttatgaatcaaaggattccatggttctagatcaaatgcaatggaaagatagattgtatagttctctctaggagtcatcacaaagatgcaaatgaataa 45035166  T
Q  224 aagatatgaaa 234  Q
    ||||| |||||    
T  45035165 aagatttgaaa 45035155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 20957538 - 20957437
Alignment:
Q  247 tgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatggtttattcac 346  Q
    ||||| |||||||||||||||||||||||||||||||||  ||||||||||| | | ||||||||||| ||||||||| | |||||||||||||||||||    
T  20957538 tgagacttatttataggggtgagttagtctaactaactcacaactacctaactaactaactaaccataatttacatataacctaactatggtttattcac 20957439  T
Q  347 ta 348  Q
    ||    
T  20957438 ta 20957437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 45033470 - 45033361
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataa 223  Q
    ||||| |||||||| |||||||||||| ||| ||||||||||||||||||| |||||| ||||| ||||||||||| || ||||||||  ||||||||||    
T  45033470 tgttatgaatcaaaagattccatggttctagatcaaatgcaatggaaagatagattgtataattttctctaggagtcatcacaaagatgcaaatgaataa 45033371  T
Q  224 aagatatgaa 233  Q
    ||||||||||    
T  45033370 aagatatgaa 45033361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 247 - 345
Target Start/End: Complemental strand, 20957710 - 20957612
Alignment:
Q  247 tgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatggtttattca 345  Q
    ||||| |||||||||||||||||||||||||||||||||  ||||||||||| | | ||||||||||| ||||||||| | ||||||||||||||||||    
T  20957710 tgagacttatttataggggtgagttagtctaactaactcacaactacctaactaactaactaaccataatttacatataacctaactatggtttattca 20957612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 17308797 - 17308689
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataa 223  Q
    ||||| ||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||| |||||||||| || || |||| | || || ||||    
T  17308797 tgttatgaatcaaaggattccattgttctagatcaaatgcaatggaaagatagattgtgtaattcactctaggagtcattaccaagaaacaattgtataa 17308698  T
Q  224 aagatatga 232  Q
    |||||||||    
T  17308697 aagatatga 17308689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 1015831 - 1015756
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagt 199  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||| |||||    
T  1015831 tgttatgaatcaaaggattccatggttctagatcaaatgcaatggaaagatagattgtgtaattctctcttggagt 1015756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 3372458 - 3372564
Alignment:
Q  130 gaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataaaagata 229  Q
    |||||||| |||||||| ||| |||||||||| |||||||||||| |||| | ||||||||||| ||||| |  ||||||||| |||||||||||| |||    
T  3372458 gaatcaaaagattccatagttctaggtcaaatacaatggaaagatagattctataattctctctgggagtcaccacaaagataaaaatgaataaaatata 3372557  T
Q  230 tgaaaat 236  Q
    |||||||    
T  3372558 tgaaaat 3372564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 237 - 345
Target Start/End: Original strand, 17149055 - 17149163
Alignment:
Q  237 agtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatg 336  Q
    |||||||||||||| |||| ||| |||| ||| ||||||||||| |||| ||| ||| ||| || ||||||||||||| ||||| ||| |||||||||||    
T  17149055 agtacaatgatgagggttacttacagggatgaattagtctaactgactcctaattacttaaacaaccaactaaccataatttacctatcaactaactatg 17149154  T
Q  337 gtttattca 345  Q
    |||||||||    
T  17149155 gtttattca 17149163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 865 - 918
Target Start/End: Complemental strand, 14006971 - 14006918
Alignment:
Q  865 tttaagaaaaagagcaatgttattcattgccaagaaaaaacgaacgaaataatt 918  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  14006971 tttaagaaaaagagcaatgttattcattgccaagaaaaaagcaacgaaataatt 14006918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 33187188 - 33187291
Alignment:
Q  139 gattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataaaagatatgaaaatag 238  Q
    |||||||| ||| ||||||||||| ||||||||||| |||||||||||| |||||| |||| || || |||| | || || ||||||||||   ||||||    
T  33187188 gattccattgttctaggtcaaatgtaatggaaagatagattgtgtaattatctctatgagtcattaccaagaaacaattgtataaaagataatgaaatag 33187287  T
Q  239 taca 242  Q
    ||||    
T  33187288 taca 33187291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 30191690 - 30191620
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctcta 194  Q
    ||||| ||||||||||||||||||||| ||| |||||| ||||| |||||| |||| | ||||||||||||    
T  30191690 tgttatgaatcaaaggattccatggttctagatcaaatacaatgaaaagatagattatataattctctcta 30191620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 1e-77; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 130 - 348
Target Start/End: Original strand, 26667004 - 26667223
Alignment:
Q  130 gaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaa-tgaataaaagat 228  Q
    ||||||||||||| ||||||| ||| |||||||| |||||||| | ||||||||||||||| ||| |||| || ||||||||||||| ||||||||||||    
T  26667004 gaatcaaaggatttcatggttctagatcaaatgcgatggaaaggtagattgtgtaattctccctaagagtcatcacaaagatagaaaatgaataaaagat 26667103  T
Q  229 atgaaaatagtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaac 328  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  26667104 atgaaaatggtacaatggtgagagttatttataggggtgagttagtctaactaactcttaactacctaactaaccaactaaccataatttacatattaac 26667203  T
Q  329 taactatggtttattcacta 348  Q
    ||||||||||| ||||||||    
T  26667204 taactatggttaattcacta 26667223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 220 - 348
Target Start/End: Complemental strand, 25836495 - 25836367
Alignment:
Q  220 ataaaagatatgaaaatagtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagttta 319  Q
    ||||||||||  || | ||||||||| ||||||||||||||| || |||  ||||||||||||||| |||||||||||| | ||||||| ||||||||||    
T  25836495 ataaaagataacaagagagtacaatggtgagagttatttataaggatgaactagtctaactaactcctaactacctaactaaccaactagccatagttta 25836396  T
Q  320 catattaactaactatggtttattcacta 348  Q
      ||| |||||||||||||||||||||||    
T  25836395 tctatcaactaactatggtttattcacta 25836367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 27682301 - 27682197
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataa 223  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||||| |  |||||||| |||||||||||||| || ||||||||  ||||||||||    
T  27682301 tgttatgaatcaaaggattccatggttctagatcaaatgcaatggaaaggtaaattgtgtagttctctctaggagtcatcacaaagatgcaaatgaataa 27682202  T
Q  224 aagat 228  Q
    |||||    
T  27682201 aagat 27682197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 41874620 - 41874545
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagt 199  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||    
T  41874620 tgttatgaatcaaaggattccatggttctaggtcaaatgcaatggaaagatagattttgtaattctctctaggagt 41874545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 28133830 - 28133726
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataa 223  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||||| |  |||||||| |||||||||||||| || ||||||||  || |||||||    
T  28133830 tgttatgaatcaaaggattccatggttctagatcaaatgcaatggaaaggtaaattgtgtagttctctctaggagtcatcacaaagatgcaattgaataa 28133731  T
Q  224 aagat 228  Q
    |||||    
T  28133730 aagat 28133726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 238 - 345
Target Start/End: Original strand, 9032830 - 9032937
Alignment:
Q  238 gtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatgg 337  Q
    |||||||| ||| || |||||||| |||  ||||||||||||||||||||||||||  ||||| ||| ||||||||||||| ||||| |||||||||||     
T  9032830 gtacaatggtgaaagctatttataagggaaagttagtctaactaactcttaactactcaaccaaccagctaaccatagttttcatatcaactaactatga 9032929  T
Q  338 tttattca 345  Q
    ||||||||    
T  9032930 tttattca 9032937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 251 - 348
Target Start/End: Complemental strand, 548187 - 548092
Alignment:
Q  251 agttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatggtttattcacta 348  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||  |||| |||| |||| |||||||||||    
T  548187 agttatttatagtg-tgagttagtctaactaactcttaactacctaaccaaccaactaatcatagtttac-cattatctaaatatgatttattcacta 548092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 4602403 - 4602293
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataa 223  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||||| |  ||||| || ||||||||| |||| || ||||||||  || | |||||    
T  4602403 tgttatgaatcaaaggattccatggttctagatcaaatgcaatggaaaggtaaattgtatagttctctctatgagtcataacaaagatgcaattaaataa 4602304  T
Q  224 aagatatgaaa 234  Q
    |||||||||||    
T  4602303 aagatatgaaa 4602293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 43819944 - 43820012
Alignment:
Q  246 atgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccata 314  Q
    ||||| |||||||||||| |||||||||||| ||||||| ||||||||||||||| |||||||| ||||    
T  43819944 atgagggttatttataggagtgagttagtcttactaacttttaactacctaaccaaccaactaatcata 43820012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 4609215 - 4609105
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataa 223  Q
    ||||| |||||||||||||| || ||| ||| ||||||||||| ||||| |  ||||| || |||||||||| ||| || ||||||||  || |||||||    
T  4609215 tgttatgaatcaaaggattcaattgttctagatcaaatgcaattgaaaggtaaattgtatagttctctctagcagtcatcacaaagatgcaattgaataa 4609116  T
Q  224 aagatatgaaa 234  Q
    |||||||||||    
T  4609115 aagatatgaaa 4609105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 26317951 - 26318048
Alignment:
Q  131 aatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataaaagat 228  Q
    |||||||||||| ||||||| ||  |||||| ||||| |||||| |||||| || | ||||  |||||| || | ||  |||||||||||||||||||    
T  26317951 aatcaaaggatttcatggttctaaatcaaatacaatgaaaagatagattgtttattgctcttgaggagtcattagaacaatagaaatgaataaaagat 26318048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 27972632 - 27972591
Alignment:
Q  193 taggagttatgacaaagatagaaatgaataaaagatatgaaa 234  Q
    ||||||| || ||||| |||||||||||||||||||||||||    
T  27972632 taggagtcatcacaaatatagaaatgaataaaagatatgaaa 27972591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 6e-58; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 123 - 348
Target Start/End: Complemental strand, 6742653 - 6742425
Alignment:
Q  123 gtgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaata 222  Q
    |||||| |||||||| |||||||| ||| ||| ||||||||||||||||||| ||||||||| ||||||||| |||| || |||||||||||||| ||||    
T  6742653 gtgttatgaatcaaacgattccatagttctagatcaaatgcaatggaaagatagattgtgtatttctctctacgagtcatcacaaagatagaaataaata 6742554  T
Q  223 aaagatatgaaaatagtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacat 322  Q
    ||| |||| |||||||||||||  ||||||||||||||||  || | ||||| |||||||||||||| |||||||||| ||||||||||||| |||| ||    
T  6742553 aaaaatatcaaaatagtacaatagtgagagttatttatagaagtaaattagtttaactaactcttaattacctaaccaaccaactaaccataatttatat 6742454  T
Q  323 attaactaacta---tggtttattcacta 348  Q
    ||||| ||||||   ||||||||||||||    
T  6742453 attaattaactatattggtttattcacta 6742425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 10410908 - 10410798
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataa 223  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||  |||||||  ||||||||||    
T  10410908 tgttatgaatcaaaggattccatggttctaggtcaaatgcaatggaaagatagattgtgtaattctctctaggagtcatcccaaagatgcaaatgaataa 10410809  T
Q  224 aagatatgaaa 234  Q
    ||||| |||||    
T  10410808 aagatgtgaaa 10410798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 237 - 348
Target Start/End: Original strand, 4897423 - 4897532
Alignment:
Q  237 agtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatg 336  Q
    ||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||  |||| |||||||||    
T  4897423 agtacaatattgagagttatttataggg-tgagttagtctaactaactcttaactacctaatcaaccaactaaccatagtttac-cattatctaactatg 4897520  T
Q  337 gtttattcacta 348  Q
    ||||||||||||    
T  4897521 gtttattcacta 4897532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 21637272 - 21637381
Alignment:
Q  251 agttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatggtttattcac--ta 348  Q
    ||||||||||| |||||||||||| |||||||||| |||||||||||||| ||||||||| ||||||  ||||| |||||||||||||||||||||  ||    
T  21637272 agttatttataagggtgagttagtgtaactaactcctaactacctaaccaaccaactaactatagttctcatataaactaactatggtttattcactata 21637371  T
Q  349 ctctaatagt 358  Q
    ||||||||||    
T  21637372 ctctaatagt 21637381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 10412470 - 10412371
Alignment:
Q  135 aaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataaaagatatgaaa 234  Q
    |||||||| ||||||||||||||||||||||| ||||||| |||||||||||| |||||| || |||| ||||||||  |||||||||||||||||||||    
T  10412470 aaaggatttcatggttttaggtcaaatgcaatcgaaagatagattgtgtaattttctctaagaattatcacaaagatgcaaatgaataaaagatatgaaa 10412371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 220 - 341
Target Start/End: Complemental strand, 33689990 - 33689869
Alignment:
Q  220 ataaaagatatgaaaatagtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagttta 319  Q
    ||||||||||  |||||||||||||  |||||| |||||||| |||  ||||||||||| | ||||||||||||||||| | |||| || ||||||||||    
T  33689990 ataaaagataacaaaatagtacaatagtgagagctatttataagggcaagttagtctaattgactcttaactacctaactaaccaattatccatagttta 33689891  T
Q  320 catattaactaactatggttta 341  Q
    | ||||||||||||||||||||    
T  33689890 cttattaactaactatggttta 33689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 8081612 - 8081508
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataa 223  Q
    ||||| |||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| || || |||| | || || ||||    
T  8081612 tgttatgaatcaaagggttccatggttctaggtcaaatgcaatggaaagatagattgtgtaattctctctaggagtcattactaagaaacaattgtataa 8081513  T
Q  224 aagat 228  Q
    |||||    
T  8081512 aagat 8081508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 25725808 - 25725883
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagt 199  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  25725808 tgttatgaatcaaaggattccatggttctagatcaaatgcaatggaaagatagattgtgtaattctctctaggagt 25725883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 239 - 348
Target Start/End: Complemental strand, 33688262 - 33688153
Alignment:
Q  239 tacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatggt 338  Q
    ||||||| |||||| |||| |||| |||| |||||||| | |||||||||| |||||||||| | ||| ||||||| |||||||||||||||||||||||    
T  33688262 tacaatggtgagagctattaatagaggtgggttagtcttagtaactcttaaatacctaaccaactaaccaaccataatttacatattaactaactatggt 33688163  T
Q  339 ttattcacta 348  Q
    ||| ||||||    
T  33688162 ttaatcacta 33688153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 25502025 - 25502100
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagt 199  Q
    ||||| |||||| |||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||||||||    
T  25502025 tgttatgaatcagaggattccatggttctagatcaaatgcaatggaaatatagattgtgtaattctctctaggagt 25502100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 25506938 - 25507045
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataa 223  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||| ||| | || ||||||| | || || ||||    
T  25506938 tgttatgaataaaaggattccatggttttagatcaaatgcaatggaaagatagattatgtaattctctctgggattcattacaaagaaacaattgtataa 25507037  T
Q  224 aagatatg 231  Q
    || |||||    
T  25507038 aaaatatg 25507045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 40382763 - 40382830
Alignment:
Q  130 gaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctagga 197  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||  |||||||||||||||||||||    
T  40382763 gaatcaaaggattacattgttctaggtcaaatgcaatggaaagataaattgtgtaattctctctagga 40382830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 9e-51; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 124 - 346
Target Start/End: Original strand, 35674837 - 35675058
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataa 223  Q
    ||||| |||||  |||||| ||||||| || |||||||||||||||||| | |||||||||||||||||||||||| || ||||||||| ||||||||      
T  35674837 tgttacgaatctgaggattgcatggttctaagtcaaatgcaatggaaaggtagattgtgtaattctctctaggagtcatcacaaagatataaatgaattt 35674936  T
Q  224 aagata-tgaaaatagtacaat-gatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttaca 321  Q
     ||| | ||| ||||   |||| | ||||||||||||||||| ||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||||    
T  35674937 tagacaatgagaata---caatagttgagagttatttataggagtgagttagtctaactaactcctaactatctaactaaccaactaaccatagtttaca 35675033  T
Q  322 tattaactaactatggtttattcac 346  Q
    ||||||||||||||| |||||||||    
T  35675034 tattaactaactatgatttattcac 35675058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 124 - 242
Target Start/End: Original strand, 30634229 - 30634347
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataa 223  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||| |||| || || |||| | || || ||||    
T  30634229 tgttatgaatcaaaggattctatggttttaggtcaaatgcaatggaaagatagattctgtaattctctctatgagtcattactaagaaacaattgtataa 30634328  T
Q  224 aagatatgaaaatagtaca 242  Q
    ||||||   ||||||||||    
T  30634329 aagataatgaaatagtaca 30634347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 137 - 229
Target Start/End: Original strand, 35673345 - 35673437
Alignment:
Q  137 aggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataaaagata 229  Q
    |||||||||||||| || |||||||||||||||||||| |||||| |||||||||||| || | || ||| ||||| ||||||||||||||||    
T  35673345 aggattccatggttctaagtcaaatgcaatggaaagatagattgtataattctctctatgaatcatcacagagatataaatgaataaaagata 35673437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 29456284 - 29456381
Alignment:
Q  248 gagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatggtttattca 345  Q
    |||||||||||| | |||||||||||||||| |||||| ||||||||||||||   ||||||| ||||||||| |||| |||||||||| || |||||    
T  29456284 gagagttatttacaagggtgagttagtctaaataactcataactacctaaccaattaactaactatagtttacttattgactaactatgattgattca 29456381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 1175223 - 1175148
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagt 199  Q
    ||||| |||| ||||||||| |||||| ||||||||||| |||| |||||| |||||||||||| | |||||||||    
T  1175223 tgttatgaattaaaggattctatggttctaggtcaaatgtaatgaaaagatagattgtgtaattttttctaggagt 1175148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 1173610 - 1173513
Alignment:
Q  132 atcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataaaagata 229  Q
    |||||||||||||||  || ||| |||||||||||| ||| || |||||| ||||||||||||||||| || || |||| | || || ||||||||||    
T  1173610 atcaaaggattccataattctagatcaaatgcaatgaaaaaatagattgtataattctctctaggagtcattaccaagaaacaattgtataaaagata 1173513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 35673477 - 35673512
Alignment:
Q  313 tagtttacatattaactaactatggtttattcacta 348  Q
    ||||||||||||||||||||||||||||||||||||    
T  35673477 tagtttacatattaactaactatggtttattcacta 35673512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 2e-39; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 237 - 348
Target Start/End: Original strand, 29598097 - 29598208
Alignment:
Q  237 agtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatg 336  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||  | |||||||||||||||||||||||||||||||||    
T  29598097 agtataatggtgagagttatttataggggtgagttagtctaactaactcctaaccacctaacctacaaactaaccatagtttacatattaactaactatg 29598196  T
Q  337 gtttattcacta 348  Q
    ||||||||||||    
T  29598197 gtttattcacta 29598208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 237 - 358
Target Start/End: Original strand, 21633313 - 21633436
Alignment:
Q  237 agtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatg 336  Q
    ||||||||| ||| |||||||||||| ||||| ||||| |||||||||| |||| ||||||||  ||||||||||||||||||||||| ||||||| |||    
T  21633313 agtacaatggtgatagttatttatagtggtgaattagtataactaactcctaaccacctaacctaccaactaaccatagtttacatatcaactaacaatg 21633412  T
Q  337 gtttattcac--tactctaatagt 358  Q
    ||||| ||||  ||||||||||||    
T  21633413 gtttactcactatactctaatagt 21633436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 29924733 - 29924665
Alignment:
Q  131 aatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagt 199  Q
    |||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29924733 aatcaaaggattccatagttctaggtcaaatgcaatggaaagatagattgtgtaattctctctaggagt 29924665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 237 - 358
Target Start/End: Original strand, 21631352 - 21631467
Alignment:
Q  237 agtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatg 336  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||        |||||||  ||||||||||||||||||||||| ||||||| |||    
T  21631352 agtacaatggtgagggttatttataggggtgagttagtctaactaact--------cctaacctaccaactaaccatagtttacatatcaactaacaatg 21631443  T
Q  337 gtttattcac--tactctaatagt 358  Q
    ||||| ||||  ||||||||||||    
T  21631444 gtttactcactatactctaatagt 21631467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 237 - 348
Target Start/End: Original strand, 21631122 - 21631225
Alignment:
Q  237 agtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatg 336  Q
    |||||| || |||| ||||||||||||||||||||||||||||||||||        ||||||  ||||||||||||||||||||||| |||||||||||    
T  21631122 agtacactggtgagggttatttataggggtgagttagtctaactaactc--------ctaacctaccaactaaccatagtttacatatcaactaactatg 21631213  T
Q  337 gtttattcacta 348  Q
    ||||| ||||||    
T  21631214 gtttactcacta 21631225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 21464615 - 21464528
Alignment:
Q  131 aatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattct--ctctaggagttatgacaaagatagaaa 216  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||||  |||||||||| || |||||| ||||||    
T  21464615 aatcaaagaattccatggttctagatcaaatgcaatggaaagatagattgtgtaattctctctctaggagtcattacaaaggtagaaa 21464528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 3233025 - 3232944
Alignment:
Q  219 aataaaagatatgaaaatagtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaacca 300  Q
    |||||||||||  || | | ||||||||||||||||||||||| || ||||||||| |||| ||||||||||||||||||||    
T  3233025 aataaaagataataagaaaatacaatgatgagagttatttataaggatgagttagtgtaacaaactcttaactacctaacca 3232944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 247 - 341
Target Start/End: Original strand, 21633093 - 21633179
Alignment:
Q  247 tgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatggttta 341  Q
    |||| |||||||||||||||||| |||||||||||||||        ||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  21633093 tgagggttatttataggggtgagatagtctaactaactc--------ctaacctaccaactaaccatagtttacatatcaactaactatggttta 21633179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 273 - 358
Target Start/End: Original strand, 9878298 - 9878384
Alignment:
Q  273 gtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatggtttattcac--tactctaatagt 358  Q
    ||||||||||||| |||||| ||||| |  ||||||||||||||||| |||||||||| |||||||||||||||  ||||||||||||    
T  9878298 gtctaactaactcctaactatctaac-atacaactaaccatagtttatatattaactacctatggtttattcactatactctaatagt 9878384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 29856101 - 29856150
Alignment:
Q  251 agttatttataggggtgagttagtctaactaactcttaactacctaacca 300  Q
    ||||||||||||  ||||||| ||||||||||||| ||||||||||||||    
T  29856101 agttatttatagtagtgagttggtctaactaactcctaactacctaacca 29856150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 3e-38; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 239 - 348
Target Start/End: Complemental strand, 30488541 - 30488432
Alignment:
Q  239 tacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatggt 338  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||| |||||||||||||||||||||||    
T  30488541 tacaatggtgagagctatttataggggtgagttagtctaactaacttttaactatctaaccaaccaacaaaccataatttacatattaactaactatggt 30488442  T
Q  339 ttattcacta 348  Q
    ||||||||||    
T  30488441 ttattcacta 30488432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 123 - 242
Target Start/End: Complemental strand, 15689145 - 15689026
Alignment:
Q  123 gtgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaata 222  Q
    |||||| |||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||| |||| || |||||||||||||||||||    
T  15689145 gtgttatgaatcaaaggattccatgattctaggtcaaatgcaatggaaagatagattgtgtaattctctcta-gagtcatcacaaagatagaaatgaata 15689047  T
Q  223 aaagatat-gaaaatagtaca 242  Q
    ||| | || ||||||||||||    
T  15689046 aaaaagatagaaaatagtaca 15689026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 25050932 - 25050859
Alignment:
Q  275 ctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatggtttattcacta 348  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||||||||||    
T  25050932 ctaactaactcttaactacctaaccaagtaactaaccatagtttacatattatctaactatggtttattcacta 25050859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 152 - 284
Target Start/End: Original strand, 9373599 - 9373730
Alignment:
Q  152 taggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataaaagatatgaaaatagtacaatgatgaga 251  Q
    ||||||||||||||||||||||| || ||||||||| ||| ||||||| || ||||||||| ||||||||||||||| || | | ||||||||  | |||    
T  9373599 taggtcaaatgcaatggaaagatagaatgtgtaattttctataggagtcataacaaagatataaatgaataaaagatgtg-agagagtacaattgtaaga 9373697  T
Q  252 gttatttataggggtgagttagtctaactaact 284  Q
    |||||||||| | ||  || |||||||||||||    
T  9373698 gttatttataagagtcggtaagtctaactaact 9373730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 34350341 - 34350452
Alignment:
Q  131 aatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataaaagatat 230  Q
    |||||||||||||||||||| |||||||||| ||| ||||| || | || ||||||||||| ||||||| || || |||| | || || ||||||||||     
T  34350341 aatcaaaggattccatggttctaggtcaaatacaacggaaaaatagtttatgtaattctctttaggagtcattactaagaaacaattgtataaaagatag 34350440  T
Q  231 gaaaatagtaca 242  Q
      ||||||||||    
T  34350441 tgaaatagtaca 34350452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 268 - 348
Target Start/End: Complemental strand, 26857895 - 26857816
Alignment:
Q  268 agttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatggtttattcacta 348  Q
    ||||||||||||||||||||||||||||||||| |||| ||||  || |||||  || | |||||||||| ||||||||||    
T  26857895 agttagtctaactaactcttaactacctaaccaaccaattaactctaatttac-catcatctaactatggcttattcacta 26857816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 3e-38; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 220 - 345
Target Start/End: Complemental strand, 42665057 - 42664932
Alignment:
Q  220 ataaaagatatgaaaatagtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagttta 319  Q
    ||||||||||  || ||||||||||  |||||  |||||||| ||||||||||||||||||||||||||||||||||| || |||||||||| |||||||    
T  42665057 ataaaagataacaagatagtacaattgtgagaactatttataagggtgagttagtctaactaactcttaactacctaaacaaccaactaaccgtagttta 42664958  T
Q  320 catattaactaactatggtttattca 345  Q
    ||||||||||||||||||||||||||    
T  42664957 catattaactaactatggtttattca 42664932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 28395559 - 28395667
Alignment:
Q  130 gaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaa----agatagaaatgaataaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||    ||||||||||||||||||    
T  28395559 gaatcaaaggattccatggttttaggtcaaatgcaatggaaagatagattgtgtaattctctctaggagtcatcacaaagatagatagaaatgaataaaa 28395658  T
Q  226 gatatgaaa 234  Q
    |||||||||    
T  28395659 gatatgaaa 28395667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 10032679 - 10032785
Alignment:
Q  237 agtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatg 336  Q
    ||||||||  |||||||||||||||||| ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| | |||||||||||    
T  10032679 agtacaatagtgagagttatttataggg-tgagttagtctaaccgactcttaactacctaaccaaccaactaaccatagtttacatctcaactaactatg 10032777  T
Q  337 gtttattc 344  Q
    ||||||||    
T  10032778 gtttattc 10032785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 276 - 348
Target Start/End: Original strand, 42665175 - 42665247
Alignment:
Q  276 taactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatggtttattcacta 348  Q
    |||||||||||||||||||||| ||   ||||||||||| |||||||||||||||||||||||||||||||||    
T  42665175 taactaactcttaactacctaaacaaataactaaccataatttacatattaactaactatggtttattcacta 42665247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 237 - 348
Target Start/End: Original strand, 18812662 - 18812774
Alignment:
Q  237 agtacaatgatgagagttatttataggggtgagttagtc--taactaactcttaactacctaaccagccaactaaccatagtttacatattaactaacta 334  Q
    ||||||||  |||||| ||||||||| | |||||||||   ||||||||||||||||||||||| |   ||||||||||||||||||||||| |||| ||    
T  18812662 agtacaatagtgagagatatttatagag-tgagttagttcgtaactaactcttaactacctaactaagtaactaaccatagtttacatattatctaatta 18812760  T
Q  335 tggtttattcacta 348  Q
    ||||||||||||||    
T  18812761 tggtttattcacta 18812774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 4847687 - 4847755
Alignment:
Q  123 gtgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctct 191  Q
    |||||| |||| |||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||||    
T  4847687 gtgttatgaattaaaggattccatggttctaggtcaaatgtaatggaaagatagattttgtaattctct 4847755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 275 - 358
Target Start/End: Original strand, 18807515 - 18807599
Alignment:
Q  275 ctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatggtttattcac--tactctaatagt 358  Q
    |||||||||||||| |||||||||||   ||||||||||||||||||||||| |||  ||||||||||||||  ||||||||||||    
T  18807515 ctaactaactctta-ctacctaaccaagtaactaaccatagtttacatattatctagttatggtttattcactatactctaatagt 18807599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 5653307 - 5653358
Alignment:
Q  247 tgagagttatttataggggtgagttagtctaactaactcttaactacctaac 298  Q
    ||||| |||||||||||||||||||||| |||||||||| ||||||||||||    
T  5653307 tgagacttatttataggggtgagttagtataactaactcctaactacctaac 5653358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 237 - 348
Target Start/End: Original strand, 8818744 - 8818853
Alignment:
Q  237 agtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatg 336  Q
    |||| |||||| |||||| ||||||  | ||||||||||||||||| | |||||||| |||||| | ||| |||  |||||||| ||||||||||| |||    
T  8818744 agtataatgataagagtt-tttataaagatgagttagtctaactaatttttaactacttaaccaacaaacaaactctagtttac-tattaactaaccatg 8818841  T
Q  337 gtttattcacta 348  Q
     |||||||||||    
T  8818842 atttattcacta 8818853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 308 - 347
Target Start/End: Original strand, 19223142 - 19223181
Alignment:
Q  308 aaccatagtttacatattaactaactatggtttattcact 347  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  19223142 aaccatagtttatatattaactaactatggtttattcact 19223181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 8678640 - 8678562
Alignment:
Q  234 aatagtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaacca 312  Q
    ||||||| |||  ||| ||||||||||||||||| ||||| ||||||||||  |||||||||| ||| ||||| |||||    
T  8678640 aatagtataatagtgaaagttatttataggggtgggttagactaactaactgctaactacctagccaaccaaccaacca 8678562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 78; Significance: 8e-36; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 248 - 358
Target Start/End: Original strand, 9093 - 9205
Alignment:
Q  248 gagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatggtttattcac- 346  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||  ||||||||||||||| |||||| |||||||||||||||||||||     
T  9093 gagagttatttataggggtgagttagtgtaactaactcctaactacctaaccaaacaactaaccatagttcacatataaactaactatggtttattcact 9192  T
Q  347 -tactctaatagt 358  Q
     ||||||||||||    
T  9193 atactctaatagt 9205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 1e-34; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 1284937 - 1284831
Alignment:
Q  237 agtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatg 336  Q
    ||||||||  ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||    
T  1284937 agtacaatagtgatagttatttataggg-tgagttagtctaactaactcttaactacctaaccaaccaactaaccatagtttacatctcaactaactatg 1284839  T
Q  337 gtttattc 344  Q
    ||||||||    
T  1284838 gtttattc 1284831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 123 - 242
Target Start/End: Original strand, 44782182 - 44782301
Alignment:
Q  123 gtgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaata 222  Q
    |||||| |||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| || || |||| | || || |||    
T  44782182 gtgttatgaattaaaggattccatggttctaggtcaaatgcaatggaaagatagattgtgtaattctctctaggagtcattactaagaaacaattgtata 44782281  T
Q  223 aaagatatgaaaatagtaca 242  Q
    |||||||   ||||||||||    
T  44782282 aaagataatgaaatagtaca 44782301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 46679812 - 46679708
Alignment:
Q  124 tgttaggaatcaaaggattccatggttttaggtcaaatgcaatggaaagatggattgtgtaattctctctaggagttatgacaaagatagaaatgaataa 223  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||| || || |||| | || || ||||    
T  46679812 tgttatgaatcaaaggattccatggttctagatcaaatgcaatggaaagatagattgtgtaattctctctaggagtcattaccaagaaacaattgtataa 46679713  T
Q  224 aagat 228  Q
    |||||    
T  46679712 aagat 46679708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 237 - 323
Target Start/End: Complemental strand, 33072845 - 33072760
Alignment:
Q  237 agtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacata 323  Q
    ||||||||  ||||||||||||||| |||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33072845 agtacaatagtgagagttatttataagggtgagtcag-ctaactaactcttaactacctaaccaaccaactaaccatagtttacata 33072760  T

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Target: chr1; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 237 - 347
Target Start/End: Complemental strand, 10653594 - 10653488
Alignment:
Q  237 agtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatg 336  Q
    ||||||||  |||||| |||||| |||||||||||||||||||||||||||||| ||||||    ||||||||||||| ||||| ||| ||||||||||     
T  10653594 agtacaattgtgagagctatttacaggggtgagttagtctaactaactcttaaccacctaa----ccaactaaccataatttacgtataaactaactata 10653499  T
Q  337 gtttattcact 347  Q
     ||||||||||    
T  10653498 ctttattcact 10653488  T

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Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 253 - 348
Target Start/End: Complemental strand, 41892178 - 41892084
Alignment:
Q  253 ttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatggtttattcacta 348  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||| |||||||| |||| || || ||| |||||||| ||||||||||||||    
T  41892178 ttatttataggggtgagttagtataactaactcccaactacctaaccaaccaactaatcatacttcacctatcaactaact-tggtttattcacta 41892084  T

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Target: scaffold0245 (Bit Score: 72; Significance: 3e-32; HSPs: 2)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 9582 - 9476
Alignment:
Q  237 agtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatg 336  Q
    ||||||||  ||| |||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| | |||||||||||    
T  9582 agtacaatagtgatagttatttataggg-tgagttagtctaactaacacttaactacctaaccaaccaactaaccatagtttacatctcaactaactatg 9484  T
Q  337 gtttattc 344  Q
    ||||||||    
T  9483 gtttattc 9476  T

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Target: scaffold0245; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 11204 - 11098
Alignment:
Q  237 agtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatg 336  Q
    ||||||||  ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| || | |||||||||||    
T  11204 agtacaatagtgatagttatttataggg-tgagttagtctaactaactcttaactacctaaccaaccaactaaccatagtttatatctcaactaactatg 11106  T
Q  337 gtttattc 344  Q
    ||||||||    
T  11105 gtttattc 11098  T

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Target: scaffold0229 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 9910 - 9804
Alignment:
Q  237 agtacaatgatgagagttatttataggggtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatg 336  Q
    ||||||||  ||| |||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| | |||||||||||    
T  9910 agtacaatagtgatagttatttataggg-tgagttagtctaactaacacttaactacctaaccaaccaactaaccatagtttacatctcaactaactatg 9812  T
Q  337 gtttattc 344  Q
    ||||||||    
T  9811 gtttattc 9804  T

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Target: scaffold0160 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 28492 - 28412
Alignment:
Q  265 gtgagttagtctaactaactcttaactacctaaccagccaactaaccatagtttacatattaactaactatggtttattca 345  Q
    |||||||| ||||||||||||||||||   |||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  28492 gtgagttaatctaactaactcttaactgtataaccaaccaactaaccatagtttacctatcaactaactatggtttattca 28412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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