View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7758_low_15 (Length: 203)
Name: NF7758_low_15
Description: NF7758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7758_low_15 |
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Alignment Details
Target: chr6 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 1273936 - 1274109
Alignment:
| Q |
15 |
aatataatatctttgtcccttagtacatatttgtctttgcatctcaataaactcaatataaaataatctttatattattgaccttattgattgcattgat |
114 |
Q |
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| T |
1273936 |
aatataatatctttgtcccttagtacatatttgtctttgcatctcaataaactctatataaaataatctttatattattgaccttattgattgcattgat |
1274035 |
T |
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| Q |
115 |
tacattcacctgtatagtacctttttcctgttttggtctctttctctcactttgatgaattcatagaaattatt |
188 |
Q |
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| T |
1274036 |
tacattcacctgtatagtacctttttcctgttttggtctctttctctcactttgatgaattcatagaaattatt |
1274109 |
T |
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