View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7760_low_6 (Length: 339)
Name: NF7760_low_6
Description: NF7760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7760_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 8 - 333
Target Start/End: Complemental strand, 31097046 - 31096722
Alignment:
| Q |
8 |
tgaaatgaagatgttacaatagcaaaacttaaatgaaacccttcatcactccaatttagtggagttagaaattttactccaaataagaaactaaaacaac |
107 |
Q |
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| T |
31097046 |
tgaaatgaagatgttacaatagcaaaacttaaatgaaagccttcatcactccaattaagtggagttagaaattt-actccaaataagaaactaaaacaac |
31096948 |
T |
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| Q |
108 |
catgaatagaaatattaaactaatcaacttaaattttctctgtaagaggagaacacttacttagcatcataacaaatgaaagagcattgtctataagtta |
207 |
Q |
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| T |
31096947 |
catgaatagaaatattaaactaatcaacttaaattttctctgtaagaggagaacacttacttagcatcataacaaatgaaagagcattgtctataagtca |
31096848 |
T |
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| Q |
208 |
taaggaagggatcagaggaaccaaattaatgatgattccgcggtcttgaaaaattactactattctgagggtgttgcatgctagtaaagcctatgtccgg |
307 |
Q |
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| T |
31096847 |
tagggaagggatcagaggaaccaaattaatgatgattccgcggtcttgaaaaattactactattctgagggtgttgcatgctagtgaagcctatgtccgg |
31096748 |
T |
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| Q |
308 |
aacaaatagagcgttatcgaatgaat |
333 |
Q |
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| T |
31096747 |
aacaaatagagcattatcgaatgaat |
31096722 |
T |
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