View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7760_low_9 (Length: 274)

Name: NF7760_low_9
Description: NF7760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7760_low_9
NF7760_low_9
[»] chr7 (72 HSPs)
chr7 (1-256)||(7472201-7472457)
chr7 (1-256)||(7470243-7470504)
chr7 (1-256)||(38393800-38394054)
chr7 (1-256)||(20625851-20626106)
chr7 (1-256)||(20629742-20629997)
chr7 (1-256)||(20642161-20642416)
chr7 (1-250)||(18345360-18345609)
chr7 (3-256)||(3035532-3035787)
chr7 (3-256)||(28485378-28485632)
chr7 (3-256)||(11757042-11757295)
chr7 (3-256)||(20299272-20299525)
chr7 (3-256)||(28487366-28487619)
chr7 (3-256)||(20297176-20297428)
chr7 (3-249)||(7349496-7349743)
chr7 (3-249)||(7351875-7352122)
chr7 (20-256)||(7092414-7092651)
chr7 (20-256)||(7094662-7094898)
chr7 (3-256)||(31156134-31156383)
chr7 (1-250)||(13099697-13099942)
chr7 (1-256)||(43253737-43253998)
chr7 (3-250)||(42331222-42331470)
chr7 (2-250)||(37412350-37412593)
chr7 (3-256)||(1849782-1850047)
chr7 (1-250)||(21989974-21990218)
chr7 (67-256)||(38396103-38396292)
chr7 (76-256)||(1606288-1606467)
chr7 (47-250)||(3677101-3677301)
chr7 (1-114)||(48457608-48457721)
chr7 (3-250)||(24258281-24258529)
chr7 (103-255)||(21470614-21470765)
chr7 (3-161)||(443507-443661)
chr7 (1-117)||(9680770-9680887)
chr7 (1-117)||(44520-44632)
chr7 (1-117)||(18567569-18567681)
chr7 (1-117)||(27306451-27306562)
chr7 (1-117)||(31435268-31435380)
chr7 (1-134)||(9678993-9679127)
chr7 (3-117)||(1049518-1049628)
chr7 (1-108)||(3878540-3878645)
chr7 (3-114)||(40946283-40946394)
chr7 (1-117)||(35585-35697)
chr7 (173-256)||(47865445-47865528)
chr7 (1-117)||(26804529-26804637)
chr7 (3-117)||(11355214-11355324)
chr7 (3-117)||(21679983-21680093)
chr7 (3-117)||(40836965-40837075)
chr7 (1-117)||(44724535-44724647)
chr7 (3-117)||(25542487-25542596)
chr7 (3-117)||(20137332-20137442)
chr7 (1-117)||(22251763-22251875)
chr7 (1-117)||(42223112-42223225)
chr7 (3-117)||(1047147-1047265)
chr7 (3-117)||(21678022-21678132)
chr7 (1-117)||(4296156-4296269)
chr7 (3-144)||(22828856-22828993)
chr7 (1-117)||(24748550-24748662)
chr7 (3-117)||(39146210-39146320)
chr7 (15-144)||(7188472-7188596)
chr7 (3-117)||(25276097-25276207)
chr7 (15-79)||(38396306-38396370)
chr7 (1-75)||(21592364-21592438)
chr7 (47-117)||(22392429-22392495)
chr7 (13-144)||(20091775-20091901)
chr7 (3-63)||(27832856-27832916)
chr7 (13-117)||(24817583-24817682)
chr7 (43-117)||(24465504-24465575)
chr7 (67-161)||(40281660-40281753)
chr7 (74-117)||(22108117-22108160)
chr7 (74-117)||(22137128-22137171)
chr7 (74-117)||(40549877-40549920)
chr7 (74-117)||(40552155-40552198)
chr7 (18-59)||(11081522-11081562)
[»] chr3 (90 HSPs)
chr3 (3-256)||(458067-458320)
chr3 (3-256)||(455690-455943)
chr3 (3-256)||(746539-746793)
chr3 (3-256)||(4104116-4104366)
chr3 (1-256)||(25533224-25533480)
chr3 (3-256)||(10621751-10622010)
chr3 (1-250)||(42992076-42992324)
chr3 (1-256)||(42990069-42990342)
chr3 (3-250)||(53917885-53918127)
chr3 (2-250)||(51943165-51943408)
chr3 (3-250)||(53915717-53915959)
chr3 (3-250)||(27635848-27636089)
chr3 (3-250)||(1313205-1313445)
chr3 (3-256)||(41848921-41849188)
chr3 (1-161)||(6561693-6561848)
chr3 (1-117)||(10084608-10084724)
chr3 (1-117)||(11170330-11170442)
chr3 (1-117)||(47149114-47149231)
chr3 (1-114)||(4308500-4308609)
chr3 (6-117)||(6063670-6063779)
chr3 (1-117)||(10191528-10191644)
chr3 (3-117)||(38889965-38890076)
chr3 (1-117)||(11163076-11163188)
chr3 (1-117)||(18097119-18097232)
chr3 (1-117)||(18099389-18099501)
chr3 (1-144)||(24979607-24979745)
chr3 (3-117)||(3859454-3859564)
chr3 (1-114)||(27101400-27101513)
chr3 (1-117)||(38210294-38210408)
chr3 (1-117)||(45882865-45882977)
chr3 (3-117)||(10958544-10958654)
chr3 (3-117)||(10956248-10956358)
chr3 (8-117)||(15780786-15780891)
chr3 (1-114)||(35918168-35918277)
chr3 (1-114)||(51727225-51727334)
chr3 (1-117)||(1626902-1627014)
chr3 (1-117)||(26720474-26720586)
chr3 (1-79)||(30005801-30005879)
chr3 (3-114)||(50493928-50494035)
chr3 (3-117)||(5191579-5191689)
chr3 (3-117)||(22114526-22114636)
chr3 (3-117)||(35777347-35777457)
chr3 (3-117)||(6066017-6066128)
chr3 (1-114)||(9604826-9604940)
chr3 (1-117)||(47701814-47701926)
chr3 (19-117)||(5522852-5522946)
chr3 (3-117)||(43423684-43423794)
chr3 (1-117)||(12268184-12268297)
chr3 (3-75)||(28102223-28102295)
chr3 (1-117)||(32264258-32264374)
chr3 (1-114)||(43228220-43228329)
chr3 (1-117)||(3314610-3314722)
chr3 (3-117)||(6231375-6231485)
chr3 (2-117)||(18162590-18162700)
chr3 (3-117)||(28100262-28100372)
chr3 (3-117)||(43421636-43421746)
chr3 (3-117)||(48361892-48362001)
chr3 (19-112)||(32219026-32219115)
chr3 (1-117)||(880671-880783)
chr3 (16-143)||(28761662-28761784)
chr3 (1-79)||(29956646-29956724)
chr3 (1-134)||(3306708-3306837)
chr3 (1-117)||(28180950-28181060)
chr3 (5-114)||(43226015-43226119)
chr3 (1-117)||(5926983-5927095)
chr3 (3-117)||(25388824-25388942)
chr3 (19-117)||(28137532-28137626)
chr3 (1-117)||(53468675-53468786)
chr3 (2-117)||(36011753-36011864)
chr3 (19-134)||(51674992-51675103)
chr3 (3-117)||(54691795-54691904)
chr3 (15-144)||(23633359-23633483)
chr3 (1-113)||(39715400-39715507)
chr3 (39-117)||(1321367-1321441)
chr3 (19-117)||(53591121-53591215)
chr3 (13-141)||(53597143-53597265)
chr3 (13-144)||(23636926-23637052)
chr3 (1-117)||(889992-890102)
chr3 (13-117)||(31151273-31151374)
chr3 (19-75)||(4560502-4560558)
chr3 (43-144)||(1618916-1619016)
chr3 (67-117)||(6719392-6719442)
chr3 (3-49)||(28413253-28413299)
chr3 (26-75)||(54884121-54884170)
chr3 (19-75)||(4666489-4666545)
chr3 (13-117)||(24177205-24177305)
chr3 (42-79)||(6719357-6719394)
chr3 (86-144)||(25635319-25635377)
chr3 (13-67)||(36871530-36871583)
chr3 (66-114)||(27101540-27101588)
[»] chr1 (89 HSPs)
chr1 (1-256)||(21948410-21948666)
chr1 (3-256)||(31735746-31735998)
chr1 (1-256)||(47906073-47906328)
chr1 (1-256)||(39931879-39932131)
chr1 (3-255)||(9463469-9463722)
chr1 (3-256)||(27339355-27339609)
chr1 (1-250)||(2510547-2510800)
chr1 (3-250)||(9459642-9459890)
chr1 (1-256)||(15295057-15295322)
chr1 (1-256)||(24325464-24325721)
chr1 (14-256)||(27337174-27337415)
chr1 (3-256)||(46431932-46432202)
chr1 (6-239)||(28998481-28998710)
chr1 (6-239)||(29004197-29004426)
chr1 (1-250)||(48664975-48665235)
chr1 (4-250)||(17324862-17325104)
chr1 (3-250)||(2949456-2949692)
chr1 (3-117)||(47177304-47177418)
chr1 (3-117)||(47179655-47179769)
chr1 (3-117)||(12302730-12302845)
chr1 (1-117)||(13215027-13215139)
chr1 (3-117)||(28842439-28842551)
chr1 (1-117)||(41646866-41646978)
chr1 (1-147)||(6995923-6996065)
chr1 (1-117)||(15823492-15823604)
chr1 (1-117)||(28207289-28207401)
chr1 (1-117)||(38925701-38925813)
chr1 (3-117)||(20302405-20302515)
chr1 (3-117)||(51749985-51750095)
chr1 (3-117)||(28840624-28840736)
chr1 (3-117)||(6822961-6823071)
chr1 (3-117)||(47451594-47451704)
chr1 (1-114)||(2617465-2617574)
chr1 (1-117)||(13761783-13761895)
chr1 (3-117)||(6823830-6823941)
chr1 (13-239)||(26520352-26520580)
chr1 (2-114)||(14098194-14098302)
chr1 (1-113)||(18307059-18307167)
chr1 (1-144)||(31423097-31423236)
chr1 (1-144)||(39462439-39462577)
chr1 (3-113)||(10400053-10400159)
chr1 (3-117)||(16226113-16226223)
chr1 (3-117)||(20291403-20291513)
chr1 (3-117)||(3579841-3579953)
chr1 (3-74)||(16428638-16428709)
chr1 (3-143)||(17318814-17318949)
chr1 (3-113)||(25127815-25127928)
chr1 (3-117)||(17186353-17186463)
chr1 (3-117)||(25251500-25251610)
chr1 (3-117)||(51752311-51752421)
chr1 (1-77)||(4131602-4131678)
chr1 (171-234)||(6115478-6115541)
chr1 (13-117)||(11457710-11457810)
chr1 (1-75)||(18839571-18839645)
chr1 (1-75)||(31425242-31425316)
chr1 (181-250)||(4131690-4131758)
chr1 (3-117)||(50079046-50079156)
chr1 (3-117)||(9241311-9241421)
chr1 (20-109)||(25248756-25248841)
chr1 (1-72)||(6756514-6756585)
chr1 (19-117)||(16231547-16231641)
chr1 (15-117)||(31489861-31489959)
chr1 (3-117)||(50076897-50077007)
chr1 (183-250)||(45693834-45693901)
chr1 (1-117)||(50307770-50307882)
chr1 (13-144)||(42922153-42922279)
chr1 (188-256)||(6115532-6115600)
chr1 (9-144)||(8347501-8347631)
chr1 (1-117)||(50248795-50248907)
chr1 (13-117)||(18800805-18800904)
chr1 (19-68)||(16432396-16432445)
chr1 (13-117)||(14183824-14183921)
chr1 (47-144)||(49495468-49495561)
chr1 (175-250)||(6996152-6996221)
chr1 (44-113)||(26613503-26613571)
chr1 (3-66)||(40133937-40134000)
chr1 (185-250)||(6997336-6997395)
chr1 (3-117)||(17324011-17324119)
chr1 (13-144)||(8349284-8349411)
chr1 (43-75)||(6115344-6115376)
chr1 (13-113)||(13127865-13127959)
chr1 (207-250)||(11693580-11693623)
chr1 (207-250)||(14352799-14352842)
chr1 (72-159)||(16561373-16561459)
chr1 (119-161)||(14352877-14352919)
chr1 (43-117)||(30790658-30790729)
chr1 (83-117)||(43104105-43104139)
chr1 (207-256)||(13785662-13785711)
chr1 (20-113)||(13125699-13125787)
[»] chr5 (68 HSPs)
chr5 (1-256)||(18466490-18466742)
chr5 (1-256)||(18468815-18469069)
chr5 (1-256)||(27912336-27912594)
chr5 (19-256)||(10586646-10586882)
chr5 (3-250)||(18511435-18511679)
chr5 (1-250)||(27910258-27910508)
chr5 (3-250)||(18509541-18509784)
chr5 (3-256)||(15552042-15552301)
chr5 (3-256)||(25803824-25804081)
chr5 (1-250)||(26097544-26097791)
chr5 (1-246)||(18596464-18596703)
chr5 (3-246)||(26098474-26098714)
chr5 (76-256)||(3373333-3373513)
chr5 (1-240)||(40221340-40221580)
chr5 (1-117)||(1189830-1189947)
chr5 (19-114)||(4410006-4410101)
chr5 (3-117)||(21684674-21684794)
chr5 (1-117)||(2818557-2818669)
chr5 (1-117)||(25921694-25921806)
chr5 (3-117)||(31542681-31542791)
chr5 (3-117)||(31545026-31545136)
chr5 (1-114)||(39854433-39854541)
chr5 (1-117)||(21947973-21948084)
chr5 (3-117)||(38882051-38882162)
chr5 (1-117)||(4236575-4236687)
chr5 (1-117)||(17072829-17072941)
chr5 (1-117)||(20507683-20507795)
chr5 (3-117)||(2174865-2174975)
chr5 (3-117)||(12556146-12556256)
chr5 (3-117)||(31179594-31179704)
chr5 (1-117)||(16776103-16776216)
chr5 (3-79)||(34477277-34477353)
chr5 (3-79)||(34479642-34479718)
chr5 (1-117)||(25904049-25904161)
chr5 (1-144)||(6756414-6756552)
chr5 (1-117)||(16092421-16092537)
chr5 (1-114)||(10529320-10529429)
chr5 (1-116)||(10474544-10474655)
chr5 (3-117)||(20042996-20043106)
chr5 (3-117)||(31466201-31466311)
chr5 (3-117)||(31472836-31472946)
chr5 (3-117)||(34530889-34530999)
chr5 (20-161)||(41585946-41586083)
chr5 (1-117)||(36402549-36402661)
chr5 (1-114)||(6747253-6747364)
chr5 (1-75)||(39398214-39398287)
chr5 (3-117)||(20044956-20045066)
chr5 (3-117)||(24126802-24126912)
chr5 (1-79)||(6745049-6745127)
chr5 (8-158)||(6661411-6661555)
chr5 (190-250)||(21288653-21288713)
chr5 (1-112)||(17818711-17818817)
chr5 (3-113)||(37706003-37706109)
chr5 (17-117)||(695835-695931)
chr5 (69-252)||(15143303-15143482)
chr5 (1-112)||(21288715-21288822)
chr5 (43-117)||(36208526-36208597)
chr5 (1-111)||(2954368-2954474)
chr5 (67-117)||(2144874-2144925)
chr5 (74-117)||(23665084-23665127)
chr5 (74-117)||(23793460-23793503)
chr5 (71-117)||(15354769-15354815)
chr5 (71-117)||(15357045-15357091)
chr5 (72-117)||(29748287-29748333)
chr5 (1-37)||(658574-658610)
chr5 (16-72)||(20053834-20053889)
chr5 (74-114)||(23667362-23667402)
chr5 (81-117)||(39798034-39798070)
[»] chr8 (50 HSPs)
chr8 (6-256)||(15809079-15809328)
chr8 (1-256)||(28283440-28283696)
chr8 (1-256)||(3873867-3874124)
chr8 (1-161)||(32339263-32339423)
chr8 (34-250)||(43529994-43530209)
chr8 (3-250)||(41384616-41384856)
chr8 (3-250)||(41382542-41382785)
chr8 (3-161)||(24873404-24873564)
chr8 (1-256)||(608587-608848)
chr8 (20-222)||(181434-181632)
chr8 (1-117)||(15072712-15072824)
chr8 (1-117)||(14807753-14807865)
chr8 (4-117)||(12517248-12517359)
chr8 (3-143)||(13858707-13858842)
chr8 (3-143)||(14419414-14419549)
chr8 (1-117)||(27826988-27827100)
chr8 (1-117)||(27829299-27829411)
chr8 (1-117)||(33541609-33541721)
chr8 (3-117)||(18810710-18810820)
chr8 (3-117)||(27107120-27107230)
chr8 (1-117)||(15067983-15068095)
chr8 (1-117)||(28251788-28251900)
chr8 (15-117)||(3886153-3886251)
chr8 (7-117)||(4424020-4424126)
chr8 (6-143)||(5622964-5623096)
chr8 (1-114)||(22684877-22684996)
chr8 (3-117)||(36865539-36865650)
chr8 (1-117)||(1225168-1225280)
chr8 (1-117)||(26775203-26775315)
chr8 (3-117)||(14477278-14477388)
chr8 (3-117)||(44720845-44720955)
chr8 (3-79)||(43082009-43082085)
chr8 (3-75)||(27911055-27911126)
chr8 (3-75)||(27957474-27957545)
chr8 (3-79)||(43079639-43079714)
chr8 (1-117)||(30480724-30480836)
chr8 (19-117)||(18812895-18812989)
chr8 (3-117)||(35872606-35872711)
chr8 (3-117)||(5372401-5372510)
chr8 (3-117)||(25952523-25952632)
chr8 (3-144)||(15185933-15186070)
chr8 (28-75)||(37214458-37214505)
chr8 (43-117)||(2468361-2468431)
chr8 (43-117)||(21482324-21482394)
chr8 (13-122)||(31035064-31035171)
chr8 (215-256)||(32339211-32339252)
chr8 (76-144)||(31162188-31162256)
chr8 (76-117)||(6375991-6376032)
chr8 (89-144)||(17847504-17847558)
chr8 (43-75)||(21480554-21480586)
[»] chr4 (84 HSPs)
chr4 (1-250)||(24348081-24348330)
chr4 (3-256)||(22132613-22132870)
chr4 (19-247)||(17662473-17662700)
chr4 (1-246)||(14787652-14787894)
chr4 (2-245)||(53404998-53405241)
chr4 (3-256)||(22134838-22135102)
chr4 (3-256)||(44600061-44600311)
chr4 (3-197)||(47210963-47211159)
chr4 (1-250)||(5100866-5101109)
chr4 (3-250)||(56030312-56030554)
chr4 (3-161)||(18709386-18709548)
chr4 (13-242)||(19322571-19322796)
chr4 (1-117)||(5637686-5637802)
chr4 (2-117)||(37089593-37089707)
chr4 (3-114)||(8631642-8631753)
chr4 (3-117)||(11006460-11006574)
chr4 (1-117)||(22802955-22803067)
chr4 (1-117)||(47274727-47274838)
chr4 (3-117)||(11008789-11008903)
chr4 (3-117)||(38409199-38409315)
chr4 (1-117)||(5198420-5198532)
chr4 (1-117)||(24888796-24888908)
chr4 (1-117)||(48486319-48486431)
chr4 (1-134)||(13543937-13544071)
chr4 (1-117)||(9148251-9148365)
chr4 (3-117)||(11434955-11435065)
chr4 (1-117)||(36919806-36919920)
chr4 (1-114)||(40637077-40637186)
chr4 (2-114)||(6764842-6764950)
chr4 (3-117)||(7941319-7941431)
chr4 (1-117)||(22801083-22801195)
chr4 (91-250)||(30136438-30136596)
chr4 (1-117)||(3824791-3824906)
chr4 (1-144)||(52942667-52942806)
chr4 (3-117)||(619670-619780)
chr4 (3-117)||(18847153-18847263)
chr4 (3-117)||(22044613-22044723)
chr4 (3-117)||(36378292-36378402)
chr4 (1-117)||(36921715-36921828)
chr4 (1-117)||(24878989-24879101)
chr4 (1-117)||(40091636-40091748)
chr4 (3-114)||(2485095-2485203)
chr4 (3-117)||(9174369-9174479)
chr4 (3-117)||(16934366-16934476)
chr4 (3-117)||(51015246-51015356)
chr4 (1-117)||(24880451-24880563)
chr4 (3-143)||(33415710-33415845)
chr4 (1-117)||(38928399-38928511)
chr4 (6-117)||(22046911-22047018)
chr4 (1-74)||(2891356-2891429)
chr4 (3-117)||(9176697-9176807)
chr4 (1-114)||(14633323-14633431)
chr4 (3-75)||(31849822-31849894)
chr4 (5-114)||(47868404-47868509)
chr4 (1-117)||(19095882-19095994)
chr4 (3-117)||(16932012-16932122)
chr4 (3-117)||(22780596-22780714)
chr4 (3-117)||(22782961-22783079)
chr4 (6-117)||(38270212-38270319)
chr4 (3-117)||(37313289-37313399)
chr4 (4-117)||(12396069-12396178)
chr4 (4-117)||(12401031-12401140)
chr4 (171-250)||(38890516-38890596)
chr4 (3-115)||(41997494-41997602)
chr4 (3-117)||(3937432-3937541)
chr4 (3-117)||(24446807-24446912)
chr4 (1-77)||(16453345-16453421)
chr4 (13-144)||(15032770-15032896)
chr4 (7-117)||(18409574-18409679)
chr4 (6-117)||(6132873-6132979)
chr4 (13-143)||(18537705-18537829)
chr4 (13-117)||(8756483-8756583)
chr4 (43-144)||(25357610-25357713)
chr4 (43-144)||(16186099-16186197)
chr4 (207-250)||(9022182-9022225)
chr4 (1-40)||(26086197-26086236)
chr4 (89-144)||(28453660-28453715)
chr4 (67-117)||(52043712-52043763)
chr4 (67-117)||(22295153-22295203)
chr4 (3-37)||(36380425-36380459)
chr4 (43-117)||(12102090-12102162)
chr4 (44-77)||(16455323-16455356)
chr4 (223-256)||(47211158-47211191)
chr4 (89-140)||(10112847-10112899)
[»] chr2 (51 HSPs)
chr2 (1-256)||(23452458-23452712)
chr2 (3-256)||(35215809-35216067)
chr2 (4-256)||(42452566-42452814)
chr2 (3-256)||(35218186-35218448)
chr2 (3-250)||(42923732-42923971)
chr2 (1-117)||(40032279-40032391)
chr2 (1-114)||(5377650-5377763)
chr2 (1-117)||(21520914-21521028)
chr2 (3-117)||(24162435-24162545)
chr2 (3-117)||(13910267-13910377)
chr2 (3-117)||(19504568-19504678)
chr2 (3-117)||(27104721-27104831)
chr2 (1-117)||(22407630-22407742)
chr2 (1-144)||(6264370-6264504)
chr2 (3-117)||(42064437-42064547)
chr2 (1-117)||(22287557-22287669)
chr2 (2-117)||(22163169-22163280)
chr2 (3-117)||(31732988-31733098)
chr2 (1-117)||(6259036-6259148)
chr2 (5-117)||(43623793-43623901)
chr2 (3-117)||(19502234-19502344)
chr2 (3-117)||(28196559-28196669)
chr2 (1-114)||(45280205-45280315)
chr2 (1-117)||(19007562-19007674)
chr2 (3-76)||(38020161-38020234)
chr2 (3-116)||(3022086-3022195)
chr2 (14-117)||(45239210-45239314)
chr2 (1-117)||(11739781-11739893)
chr2 (1-75)||(17848403-17848477)
chr2 (3-117)||(15539698-15539808)
chr2 (1-117)||(17849039-17849151)
chr2 (1-75)||(34979800-34979874)
chr2 (1-117)||(14837195-14837307)
chr2 (89-252)||(27583631-27583786)
chr2 (21-117)||(38020065-38020157)
chr2 (14-117)||(11578339-11578437)
chr2 (43-144)||(37963190-37963287)
chr2 (74-144)||(20147038-20147108)
chr2 (3-72)||(44289291-44289360)
chr2 (171-239)||(34575527-34575588)
chr2 (43-117)||(18800565-18800635)
chr2 (67-144)||(40699205-40699282)
chr2 (13-132)||(20146839-20146955)
chr2 (67-117)||(20589583-20589633)
chr2 (44-117)||(12342673-12342743)
chr2 (207-240)||(28568584-28568617)
chr2 (43-75)||(22874102-22874134)
chr2 (20-75)||(38414281-38414330)
chr2 (13-58)||(17897475-17897519)
chr2 (18-59)||(41304627-41304667)
chr2 (89-117)||(17897547-17897575)
[»] chr6 (50 HSPs)
chr6 (1-250)||(30967046-30967294)
chr6 (3-256)||(12195738-12195987)
chr6 (3-256)||(2629108-2629362)
chr6 (3-256)||(30034826-30035079)
chr6 (3-256)||(19704792-19705048)
chr6 (3-256)||(26932785-26933041)
chr6 (2-250)||(17852389-17852634)
chr6 (73-256)||(18317868-18318051)
chr6 (1-144)||(15541361-15541499)
chr6 (3-117)||(20915579-20915691)
chr6 (1-144)||(15532902-15533040)
chr6 (1-114)||(28241542-28241651)
chr6 (1-117)||(8995460-8995572)
chr6 (1-117)||(9019907-9020019)
chr6 (3-117)||(4816454-4816578)
chr6 (16-242)||(17011907-17012121)
chr6 (171-256)||(5275726-5275811)
chr6 (3-117)||(14507398-14507508)
chr6 (3-117)||(32447539-32447649)
chr6 (3-112)||(14458988-14459093)
chr6 (1-117)||(1072098-1072210)
chr6 (1-117)||(11983250-11983362)
chr6 (1-114)||(26064965-26065079)
chr6 (1-114)||(26084934-26085048)
chr6 (3-117)||(13057175-13057285)
chr6 (3-117)||(15530345-15530455)
chr6 (1-114)||(1230470-1230579)
chr6 (1-134)||(3390343-3390472)
chr6 (1-117)||(19227629-19227741)
chr6 (3-118)||(3632161-3632272)
chr6 (3-117)||(25477255-25477365)
chr6 (1-117)||(30729049-30729161)
chr6 (3-117)||(24338671-24338781)
chr6 (3-117)||(3630087-3630197)
chr6 (3-113)||(32279982-32280087)
chr6 (3-117)||(13039735-13039845)
chr6 (1-117)||(3233952-3234063)
chr6 (4-66)||(12161779-12161841)
chr6 (1-75)||(22490658-22490733)
chr6 (3-112)||(13870645-13870749)
chr6 (67-240)||(22858238-22858403)
chr6 (44-143)||(15346347-15346441)
chr6 (3-60)||(10584155-10584212)
chr6 (43-75)||(15719673-15719705)
chr6 (13-117)||(19696422-19696523)
chr6 (91-145)||(28038012-28038066)
chr6 (67-117)||(29754979-29755029)
chr6 (76-117)||(26066320-26066361)
chr6 (76-117)||(26068591-26068632)
chr6 (207-252)||(30445359-30445404)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-246)||(51836-52078)
scaffold0005 (1-114)||(183861-183969)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-250)||(79006-79252)
[»] scaffold0511 (1 HSPs)
scaffold0511 (3-256)||(1852-2107)
[»] scaffold0154 (1 HSPs)
scaffold0154 (2-250)||(11695-11938)
[»] scaffold0025 (2 HSPs)
scaffold0025 (1-117)||(69512-69628)
scaffold0025 (1-117)||(73244-73360)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-117)||(3952-4063)
[»] scaffold0068 (1 HSPs)
scaffold0068 (3-117)||(29116-29236)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-114)||(41704-41813)
[»] scaffold0250 (1 HSPs)
scaffold0250 (3-117)||(2835-2945)
[»] scaffold0552 (1 HSPs)
scaffold0552 (2-114)||(1053-1161)
[»] scaffold0472 (1 HSPs)
scaffold0472 (3-117)||(6154-6264)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-117)||(14974-15086)
scaffold0131 (1-107)||(14603-14707)
[»] scaffold0267 (1 HSPs)
scaffold0267 (3-79)||(30-106)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-117)||(79814-79926)
[»] scaffold0468 (1 HSPs)
scaffold0468 (13-230)||(1865-2080)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-63)||(35644-35706)
[»] scaffold0224 (1 HSPs)
scaffold0224 (13-144)||(16052-16178)
[»] scaffold0133 (1 HSPs)
scaffold0133 (76-161)||(4726-4810)
[»] scaffold0045 (1 HSPs)
scaffold0045 (3-117)||(85186-85295)
[»] scaffold0057 (1 HSPs)
scaffold0057 (13-117)||(16881-16980)


Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 7472201 - 7472457
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7472201 caaagagacaatctctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 7472300  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg-nnnnnnnnctctccttcaatgaaagaatatttgcatca 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||    
T  7472301 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgtttttttttttctccttcaatgaaagaatatttgcatca 7472400  T
Q  200 aaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7472401 aaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 7472457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 7470243 - 7470504
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7470243 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 7470342  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg------nnnnnnnnctctccttcaatgaaagaatatttg 194  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||               ||||||||||||||||||||||||    
T  7470343 tctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacgtttttttttttcttttctccttcaatgaaagaatatttg 7470442  T
Q  195 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7470443 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 7470504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 38394054 - 38393800
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38394054 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaagg 38393955  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||         || |||||| ||||||||||||||||||||    
T  38393954 tctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttattttt-tcaccttcagtgaaagaatatttgcatcaa 38393856  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  38393855 aaatataacattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 38393800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 20626106 - 20625851
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20626106 caaacagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaagg 20626007  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||          |||||||| ||||| ||||||||||||||    
T  20626006 tctatatttataataaacatataactcataaatttggaacgaataccacactgaagatacgtttttttttgctccttcagtgaaaaaatatttgcatcaa 20625907  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  20625906 aaatataatattccctttcaaaatatatttgtatcaaatcgttcttcatacgatac 20625851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 20629997 - 20629742
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20629997 caaacagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaagg 20629898  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||          |||||||| ||||| ||||||||||||||    
T  20629897 tctatatttataataaacatataactcataaatttggaacgaataccacactgaagatacgtttttttttgctccttcagtgaaaaaatatttgcatcaa 20629798  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  20629797 aaatataatattccctttcaaaatatatttgtatcaaatcgttcttcatacgatac 20629742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 20642416 - 20642161
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20642416 caaacagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaagg 20642317  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||          |||||||| ||||| ||||||||||||||    
T  20642316 tctatatttataataaacatataactcataaatttggaacgaataccacactgaagatacgtttttttttgctccttcagtgaaaaaatatttgcatcaa 20642217  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  20642216 aaatataatattccctttcaaaatatatttgtatcaaatcgttcttcatacgatac 20642161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 18345609 - 18345360
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| || |||||||||||    
T  18345609 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcaaccccctctatctccctcaaagttcagcctgatacaagg 18345510  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||         ||||||||| ||||||||||||||||||||    
T  18345509 tctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaa 18345410  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18345409 aaatataatattccatttcaaaatatatttgcatcaaatcgttcttcata 18345360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 3035787 - 3035532
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3035787 aagagacaaactctataaaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtc 3035688  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnc--tctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||        |  ||||||||| ||||||||||||||||||||    
T  3035687 tatatttatagtaaaagtataactcataaatttggaacaaataccatactgaagatacgttttttttctttctccttcagtgaaagaatatttgcatcaa 3035588  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  3035587 aaatataatattccctttcaaaatatatttgcatcaaatcattcttcatacgatac 3035532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 28485632 - 28485378
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  28485632 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcaaccccttctatctctctcaaagtttagcctgatacaaggtc 28485533  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnct-ctccttcaatgaaagaatatttgcatcaaa 201  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||         | |||||||  |||||||||||||||||||||    
T  28485532 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgtgttttttttcctccttcggtgaaagaatatttgcatcaaa 28485433  T
Q  202 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28485432 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 28485378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 11757295 - 11757042
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaaccc-ttgtttcagccccctctatctctctcaaagtttagtctgatacaaggt 101  Q
    ||||||||| |||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11757295 aagagacaaactctatacaaaccctagttttgttgttgtcattctaaaccccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggt 11757196  T
Q  102 ctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaa 201  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||         ||||||||| |||||||||||||||||||||    
T  11757195 ctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgtttttttt-tctccttcagtgaaagaatatttgcatcaaa 11757097  T
Q  202 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  11757096 aatataatattccctttcaaaatatatttgcatcaaatagttcttcatacgatac 11757042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 20299525 - 20299272
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaaccc-ttgtttcagccccctctatctctctcaaagtttagtctgatacaaggt 101  Q
    ||||||||| |||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20299525 aagagacaaactctatacaaaccctagttttgttgttgtcattctaaaccccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggt 20299426  T
Q  102 ctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaa 201  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||         ||||||||| |||||||||||||||||||||    
T  20299425 ctatatttatagtaaaagtataactcataaatatggaacaaataccacactgaagatacgtttttttt-tctccttcagtgaaagaatatttgcatcaaa 20299327  T
Q  202 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20299326 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 20299272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 28487619 - 28487366
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  28487619 aagagacaaactctatacaaactctagttttgttgttacctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacatggtc 28487520  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    ||||||||||| |||  |||||||||||||||| |||||||||||||||||||||||||         ||||||||| ||||||||||||||||||||||    
T  28487519 tatatttataggaaaagtataactcataaatttagaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaa 28487420  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  28487419 atataatattccctttcaaaatatatttgcatcaaatcattcttcatacgatac 28487366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 20297428 - 20297176
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20297428 aagagacaaactctatacaaaccctagttttattgttgccattctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtc 20297329  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
     |||||| |||||||  |||||||| |||||||||||||||||||||||||||||||||         ||||||||  ||||||||||||||||||||||    
T  20297328 catatttttagtaaaagtataactcgtaaatttggaacaaataccacactgaagatacgtttttttt-tctccttcggtgaaagaatatttgcatcaaaa 20297230  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20297229 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 20297176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 3 - 249
Target Start/End: Original strand, 7349496 - 7349743
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc--tctcaaagtttagtctgatacaagg 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||| |||||||||||    
T  7349496 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccctgtttcagccccctctatctctctctcaaagtttagcctgatacaagg 7349595  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||         |||| |||| ||||||||||||||| ||||    
T  7349596 tctatatttatagtaaaagtataactcataaatttggaacaaatatcacactgaagatacgtttttttt-tctcattcagtgaaagaatatttgcctcaa 7349694  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcat 249  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7349695 aaatataatattctctttcaaaatatatttgcatcaaatcgttcttcat 7349743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 3 - 249
Target Start/End: Original strand, 7351875 - 7352122
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc--tctcaaagtttagtctgatacaagg 100  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  7351875 aagagacaaactctatacaaagcctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaagg 7351974  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    | |||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||         |||| |||| ||||||||||||||| ||||    
T  7351975 tttatatttatagtaaaagtataactcataaatttggaacaaatatcacactgaagatacgtttttttt-tctcattcagtgaaagaatatttgcctcaa 7352073  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcat 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7352074 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcat 7352122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 20 - 256
Target Start/End: Original strand, 7092414 - 7092651
Alignment:
Q  20 caaaccctagt-tttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaac 118  Q
    ||||||||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  7092414 caaaccctagtgtttgttgttgtcattctaaacccttgtttcagccccctccatctctctcaaagtttgctctgatacaaggtctatatttatagtaaac 7092513  T
Q  119 atataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaaatataatattcccttt 218  Q
    |||||||||||||||||||||| |||||||||||||||||||           |||||||| ||||||||||||||||||||||||||||||||||||||    
T  7092514 atataactcataaatttggaacgaataccacactgaagatacaattttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattcccttt 7092613  T
Q  219 caaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||| |||||    
T  7092614 caaaatatatttgcatcaaatcgttcttcatacgatac 7092651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 20 - 256
Target Start/End: Original strand, 7094662 - 7094898
Alignment:
Q  20 caaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaaca 119  Q
    |||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||    
T  7094662 caaaccctatgtttgttgttgccattctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttataataaaca 7094761  T
Q  120 tataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaaatataatattccctttc 219  Q
    ||||||||||||||||||||| ||||||||||||||||||||          |||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  7094762 tataactcataaatttggaacgaataccacactgaagatacgtttttttttcctccttcagtgaaagaatatttgcataaaaaatataatatttcctttc 7094861  T
Q  220 aaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||||||||||| |||||    
T  7094862 aaaatatatttgcatcaaatcgttcttcatacgatac 7094898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 31156134 - 31156383
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||    ||||||||| ||    
T  31156134 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc----aaagtttgccttgatacaagctc 31156229  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    |||||||||||||||  |||| |||||||||||||||||||||||||||||||||| ||         ||||||||| ||||||||||||||||||||||    
T  31156230 tatatttatagtaaaagtatagctcataaatttggaacaaataccacactgaagattcgttttttttttctccttcagtgaaagaatatttgcatcaaaa 31156329  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31156330 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 31156383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 13099697 - 13099942
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    |||||| ||||| | |||| |||||    
T  13099697 caaagagacaaactctatacaaaccctagttttgttgttgccattctaaacccttgtttcaaccccctcta----tctcaaggtttactttgattcaagg 13099792  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||         ||||||||| ||||||||||||||||||||    
T  13099793 tctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaa 13099892  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13099893 aaatataatattccctttcaaaatatatttgtatcaaatcgttcttcata 13099942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 43253737 - 43253998
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccc----cctctatctctctcaaagtttagtctgatac 96  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||||| ||||||||||||||     |||| ||||||||||||||||| |||||||    
T  43253737 caaagagacaaactctatacaaaccctagttttgttgttgtcattctaaaaccttgtttcagccctctttctctctctctctcaaagtttagcctgatac 43253836  T
Q  97 aaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatac--gnnnnnnnnctctccttcaatgaaagaatatttg 194  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||            ||||||||| ||||||||||||||    
T  43253837 aaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagatactttcttattttttctccttcagtgaaagaatatttg 43253936  T
Q  195 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43253937 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 43253998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 42331222 - 42331470
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||    ||||||||||||||||||| |||    
T  42331222 aagagacaaactctatacaaaccttagttttgttgttgtcattctaaacccttgtttcagccccctctatctc----aaagtttagtctgatacaaagtc 42331317  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg-----nnnnnnnnctctccttcaatgaaagaatatttgcat 197  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||||| ||||||||              |||||||||||||||||||||||||||    
T  42331318 tatatttatagtaaaagtataactcataaatttggaacgaataccacactaaagatacgtttttttttttctttctccttcaatgaaagaatatttgcat 42331417  T
Q  198 caaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42331418 caaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 42331470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 37412350 - 37412593
Alignment:
Q  2 aaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggt 101  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||     | ||||| |||||| ||||||    
T  37412350 aaagagacaaactctatacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctatatctcc----aggtttactctgattcaaggt 37412445  T
Q  102 ctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaa 201  Q
    |||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||         ||||||||| || ||||||||||||||||||    
T  37412446 ctatatttatagtaaaaatataactcataaatttggaacgaataacacactgaagatacgtttttttt-tctccttcagtggaagaatatttgcatcaaa 37412544  T
Q  202 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37412545 aatataatattccctttcaaaatatatttgcatcaaatcattcttcata 37412593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 1850047 - 1849782
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc------------aaagtttagtc 90  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||            |||||||  |     
T  1850047 aagagacaaactctatacaaaccctagtttttttgttgcctttctaaacccttgtttcagccccctctatctctctctctctctctctcaaagtttgcta 1849948  T
Q  91 tgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaata 190  Q
    ||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||         ||||||||| ||||||||||    
T  1849947 tgaaacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagattcgttttttttttctccttcagtgaaagaata 1849848  T
Q  191 tttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  1849847 tctgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatac 1849782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 21990218 - 21989974
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||| | |||||||||||||| | |||||||||||||||||||||||     ||| |||| | ||||| |||||| |||||    
T  21990218 caaagagacaaactctatacaaatcatagttttgttgttgtcattctaaacccttgtttcagcccc-----tctatctccaggtttactctgattcaagg 21990124  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||| |||||||||          |||||||| ||||||||||||||||||||    
T  21990123 tctatatttatagtaaaattataactcataaatttggaacgaataccacacagaagatacgtttttttttcctccttcagtgaaagaatatttgcatcaa 21990024  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21990023 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 21989974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 67 - 256
Target Start/End: Complemental strand, 38396292 - 38396103
Alignment:
Q  67 ctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnn 166  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||         
T  38396292 ctctctctctctcaaaatttagcctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagatacgttttt 38396193  T
Q  167 nnnctctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
        ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38396192 tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 38396103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 76 - 256
Target Start/End: Complemental strand, 1606467 - 1606288
Alignment:
Q  76 tctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctcc 175  Q
    |||||||||||  | |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||         |||||    
T  1606467 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagattcgtttttttt-tctcc 1606369  T
Q  176 ttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1606368 ttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 1606288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 47 - 250
Target Start/End: Complemental strand, 3677301 - 3677101
Alignment:
Q  47 taaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaatac 146  Q
    ||||||||||||||||||||     ||| |||| ||||||| |||||| |||| ||||||||||||||||| | |||||||||||||||||||| ||||     
T  3677301 taaacccttgtttcagcccc-----tctatctccaagtttactctgattcaagatctatatttatagtaaaaacataactcataaatttggaacgaatat 3677207  T
Q  147 cacactgaagatacgnnnnnnnn--ctctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttc 244  Q
    |||||||||||||||          |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3677206 cacactgaagatacgttttttttttctctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttc 3677107  T
Q  245 ttcata 250  Q
    ||||||    
T  3677106 ttcata 3677101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 48457721 - 48457608
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  48457721 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaagg 48457622  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  48457621 tctatatttatagt 48457608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 24258529 - 24258281
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    |||||| ||||| ||||||||||   |    
T  24258529 aagagacaaactctatacaaaccctaattttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaatgtttactctgatacaaaacc 24258434  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaata--ccacactgaagata-----cgnnnnnnnnctctccttcaatgaaagaatatttgc 195  Q
    ||||||||||| | | |||||||||||||||||||||| ||||   |||||||||||||     |          ||||||||| ||||||||||||| |    
T  24258433 tatatttatag-agaaatataactcataaatttggaacgaatatcacacactgaagatacatttctttatttttttctccttcagtgaaagaatatttac 24258335  T
Q  196 atcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  24258334 atcaaaaatataatattccctttcaaaatatatttgcatc-aatcgtccttcata 24258281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 103 - 255
Target Start/End: Original strand, 21470614 - 21470765
Alignment:
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||         ||||||||| ||||||||||||||||||||||    
T  21470614 tatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagatacgtttttttt-tctccttcagtgaaagaatatttgcatcaaaa 21470712  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgata 255  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  21470713 atataatattccctttcaaaatatattcgcatcaaatcgttcttcatacgata 21470765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 443661 - 443507
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||| ||| |||||||||||    || ||||| |||||| ||| |||    
T  443661 aagagacaaactctatacaaaccctagttttgttgttgccattctaaaccattgttttagctccctctatctc----aaggtttactctgattcaaagtc 443566  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg 161  Q
    |||||||||||||||  ||||||||||||||||||||| ||| ||||||||||||||||    
T  443565 tatatttatagtaaaagtataactcataaatttggaacgaattccacactgaagatacg 443507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9680887 - 9680770
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagttta-gtctgatacaag 99  Q
    ||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||  |||||||||||    
T  9680887 caaagagacaaactctatacaaaccatagttttgttgttgcccttctaaacccttgtttcaaccccctctatctctctcaaggtttacatctgatacaag 9680788  T
Q  100 gtctatatttatagtaaa 117  Q
    ||||||||||||||||||    
T  9680787 gtctatatttatagtaaa 9680770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 44632 - 44520
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||  ||||||||||||    
T  44632 caaagagacaaactctacacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaagg 44537  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  44536 tctatatttatagtaaa 44520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18567681 - 18567569
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    |||||||||||| |||||||||||     
T  18567681 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccttcta----tctcaaagtttactctgatacaaga 18567586  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  18567585 tctatatttatagtaaa 18567569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 27306451 - 27306562
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||| ||||||||||||    
T  27306451 caaagagacaaactctata-aaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttactctgatacaagg 27306545  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  27306546 tctatatttatagtaaa 27306562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 31435268 - 31435380
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    |||||||||||| |||||||||||     
T  31435268 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccttcta----tctcaaagtttactctgatacaaga 31435363  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  31435364 tctatatttatagtaaa 31435380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 9679127 - 9678993
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagttta-gtctgatacaag 99  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  9679127 caaagagacaaactctatacaaaccctagttttgttgttgtcattctagatccttgtttcagccccctctatctctctcaaagtttacatctgatacaag 9679028  T
Q  100 gtctatatttatagtaaacatataactcataaatt 134  Q
     ||||||||||||||||| | ||  ||||||||||    
T  9679027 atctatatttatagtaaaaacatccctcataaatt 9678993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 1049518 - 1049628
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||  ||| ||||||||||    
T  1049518 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctaatacaaggtc 1049613  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  1049614 tatatttatagtaaa 1049628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3878645 - 3878540
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||  ||||||||||||    
T  3878645 caaagagacaaactctatacaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctctatc--tctcaaagtttgctctgatacaagg 3878548  T
Q  101 tctatatt 108  Q
    ||||||||    
T  3878547 tctatatt 3878540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 40946394 - 40946283
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||  | ||| |||||||     
T  40946394 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctgtccctctcaaagtttgctatgaaacaaggtt 40946295  T
Q  103 tatatttatagt 114  Q
    ||||||||||||    
T  40946294 tatatttatagt 40946283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35697 - 35585
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||    |||||||||||  ||||||||||||    
T  35697 caaagagacaaactctacacaaaccctagttttgttgttgtctttctgaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaagg 35602  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  35601 tctatatttatagtaaa 35585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 47865528 - 47865445
Alignment:
Q  173 tccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47865528 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 47865445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 26804637 - 26804529
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||| ||    ||||||    
T  26804637 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc----aaagtttactc----acaagg 26804546  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  26804545 tctatatttatagtaaa 26804529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 11355324 - 11355214
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| |||||  ||||||||| | |    
T  11355324 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaaagcc 11355229  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  11355228 tatatttatagtaaa 11355214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 21680093 - 21679983
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    || |||||  || |||||| |||    
T  21680093 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc----aaggtttacactaatacaatgtc 21679998  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  21679997 tatatttatagtaaa 21679983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 40836965 - 40837075
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||   |||| |||  ||||||||||||||    
T  40836965 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttctttcagccccctcaatctc---caaa-tttgctctgatacaaggtc 40837060  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  40837061 tatatttatagtaaa 40837075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 44724647 - 44724535
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    |||| | |||||  ||||||||| |    
T  44724647 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctata----tctccaggtttacactgatacaatg 44724552  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  44724551 tctatatttatagtaaa 44724535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 25542596 - 25542487
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||     ||| |||||||||||  ||||||||||||||    
T  25542596 aagagacaaactctatacaaaccctagttttgttgttacctttctaaacctttgtttcagcccc-----tctatctcaaagtttgctctgatacaaggtc 25542502  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  25542501 tatatttatagtaaa 25542487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 20137332 - 20137442
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    |||||| ||||| |||||||||| | |    
T  20137332 aagagacaaactctatacaaactctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttactctgatacaaagcc 20137427  T
Q  103 tatatttatagtaaa 117  Q
     ||||||||||||||    
T  20137428 aatatttatagtaaa 20137442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22251763 - 22251875
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||| |||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||    |||||||||||| |||||| |||||    
T  22251763 caaatagacaaactctatacaaactctagttttgttgttgcctttctaaactcttgtttcagcctcctcta----tctcaaagtttactctgattcaagg 22251858  T
Q  101 tctatatttatagtaaa 117  Q
    | |||||||||||||||    
T  22251859 tttatatttatagtaaa 22251875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 42223225 - 42223112
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||| |   |||| |||||| ||||| |||||||||| |    
T  42223225 caaagagacaaactctatacaaaccctagttttgttgttgccattctaaacccttgtttcatcccac---atctatctcaaggtttactctgatacaaag 42223129  T
Q  101 tctatatttatagtaaa 117  Q
     ||||||||||||||||    
T  42223128 cctatatttatagtaaa 42223112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 1047147 - 1047265
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaa----agtttagtctgatacaa 98  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||      || ||||  ||||||||    
T  1047147 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccctgtttcagccccctctatctctctctctcttagattagcttgatacaa 1047246  T
Q  99 ggtctatatttatagtaaa 117  Q
    ||| |||||||||||||||    
T  1047247 ggtttatatttatagtaaa 1047265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 21678132 - 21678022
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    || |||||   ||||||||  ||    
T  21678132 aagagacaaactctatacaaaccctagttttgatgttgcctttctaaacccttgtttcagccccctctatctc----aaggtttacattgatacaatatc 21678037  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  21678036 tatatttatagtaaa 21678022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4296156 - 4296269
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaag- 99  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    || |||||  |||||||||      
T  4296156 caaagagacaaactctatacaaaccctagttttgttgttgtcattctaaacccttgtttcagccccctctatctc----aaggtttacactgatacaaat 4296251  T
Q  100 gtctatatttatagtaaa 117  Q
    ||||||||||||||||||    
T  4296252 gtctatatttatagtaaa 4296269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 22828856 - 22828993
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    |||||| || ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    |||||| ||||| || ||||||| | |    
T  22828856 aagagataaactctatacaaaccttagttttgttgttgcctttctaaactcttgtttcagccccctcta----tctcaaggtttactcggatacaaagcc 22828951  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaat 144  Q
    |||||||||||||||  |||  ||||||||  ||||||||||    
T  22828952 tatatttatagtaaaagtatccctcataaaactggaacaaat 22828993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24748662 - 24748550
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||      ||||||||||  ||||||||| |    
T  24748662 caaagagacaaactctatacaaaccctagttttattgttgtctttctaaacccttgtttcagccccctcta----agtcaaagtttacactgatacaatg 24748567  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||| ||||    
T  24748566 tctatatttataataaa 24748550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 39146210 - 39146320
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |    |||||| |||||  ||||||||  |||    
T  39146210 aagagacaaactctatacaaaccctagttttgttgttgtctatctaaacccttgtttcagccccctcca----tctcaaggtttacactgatacagtgtc 39146305  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  39146306 tatatttatagtaaa 39146320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 7188596 - 7188472
Alignment:
Q  15 ctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagt 114  Q
    |||||||||||||| |||| |||||| ||| ||||||||||||||||||||||||||||||    || ||||| |||||||||| |||||||||||||||    
T  7188596 ctatacaaaccctatttttattgttgactt-ctaaacccttgtttcagccccctctatctc----aaggtttactctgatacaaagtctatatttatagt 7188502  T
Q  115 aaacatataactcataaatttggaacaaat 144  Q
    |||  |||  |||||||| |||||||||||    
T  7188501 aaaagtatccctcataaaattggaacaaat 7188472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 25276207 - 25276097
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||    |||||||||||  |||||||||| |      
T  25276207 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaattattgttttagccccctcta----tctcaaagtttgctctgatacaaagca 25276112  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  25276111 tatatttatagtaaa 25276097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 38396370 - 38396306
Alignment:
Q  15 ctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  38396370 ctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctccctctctctc 38396306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 21592364 - 21592438
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 75  Q
    ||||||||||| ||||||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  21592364 caaagagacaaactctatacaaatcctacttttgttgttgcatttctaaacctttgtttcagccccctctatctc 21592438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 22392495 - 22392429
Alignment:
Q  47 taaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||||||||||||||||||||    |||||||| |||||||||||||||||||||||||||||    
T  22392495 taaacccttgtttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaa 22392429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 20091775 - 20091901
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgttt-cagccccctctatctctctcaaagtttagtctgatacaaggtctatatttat 111  Q
    ||||||||||||||||||||||| |||||||  | |||||||||||| ||||||||||||||||    || ||||| ||||||| || ||||||||||||    
T  20091775 ctctatacaaaccctagttttgt-gttgcctc-cgaaacccttgttttcagccccctctatctc----aaggtttactctgataaaaagtctatatttat 20091868  T
Q  112 agtaaacatataactcataaatttggaacaaat 144  Q
    ||||||  |||  |||||||| |||||||||||    
T  20091869 agtaaaagtatccctcataaaattggaacaaat 20091901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 27832856 - 27832916
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagc 63  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||| |||||||||||||||||    
T  27832856 aagagacaaactctatacaaaccttagttctgttgttgcctttttaaacccttgtttcagc 27832916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 24817583 - 24817682
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttag-tctgatacaaggtctatatttat 111  Q
    ||||||||||||||||||| | |||||| ||| |||||||||||||||||||||     ||| |||||| |||||  |||||||||||||||||||||||    
T  24817583 ctctatacaaaccctagttctcttgttgactt-ctaaacccttgtttcagcccc-----tctatctcaaggtttacatctgatacaaggtctatatttat 24817676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 24465575 - 24465504
Alignment:
Q  43 tttctaaacccttgtttcagccccctctatctctctcaaagttta-gtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||||||||||||||||||||    |||||| |||||  |||||||||| |||||||| |||||||||    
T  24465575 tttctaaacccttgtttcagccccctcta----tctcaaggtttacatctgatacaaagtctatatctatagtaaa 24465504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 161
Target Start/End: Original strand, 40281660 - 40281753
Alignment:
Q  67 ctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg 161  Q
    ||||| ||||||||| ||||  || || ||||||| ||||||||||   || ||||||||||||||||||||||| ||| ||| |||||||||||    
T  40281660 ctctacctctctcaaggtttcatccgagacaaggtttatatttataaagaa-atataactcataaatttggaacagatatcacgctgaagatacg 40281753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 22108160 - 22108117
Alignment:
Q  74 tctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||||  | |||||||||||||||||||||||||||    
T  22108160 tctctcaaagtttgctttgatacaaggtctatatttatagtaaa 22108117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 22137171 - 22137128
Alignment:
Q  74 tctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||||  | |||||||||||||||||||||||||||    
T  22137171 tctctcaaagtttgctttgatacaaggtctatatttatagtaaa 22137128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 40549920 - 40549877
Alignment:
Q  74 tctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||||  | |||||||||||||||||||||||||||    
T  40549920 tctctcaaagtttgctttgatacaaggtctatatttatagtaaa 40549877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 40552198 - 40552155
Alignment:
Q  74 tctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||||  | |||||||||||||||||||||||||||    
T  40552198 tctctcaaagtttgctttgatacaaggtctatatttatagtaaa 40552155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 11081562 - 11081522
Alignment:
Q  18 tacaaaccctagttttgttgttgcctttctaaacccttgttt 59  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  11081562 tacaaaccctagttttgttgttggc-ttctaaacccttgttt 11081522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 458320 - 458067
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  458320 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaggtttagcctgatacaaggtc 458221  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||         ||||||||| ||||||||||||||||||||||    
T  458220 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaa 458121  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  458120 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 458067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 455943 - 455690
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  455943 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaggtttagcctgatacaaggtc 455844  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    |||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||         ||||||||| ||||||||||||||||||||||    
T  455843 tatatttatagtaaaagtataactcataaatttggaacaaataccgcactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaa 455744  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  455743 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 455690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 746793 - 746539
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatacaagg 100  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  746793 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaagg 746694  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||         ||||||||| ||||||||||||||||||||    
T  746693 tctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgtttttttt-tctccttcagtgaaagaatatttgcatcaa 746595  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  746594 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 746539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 4104116 - 4104366
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4104116 aagagacaagctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtc 4104215  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||   ||||||         ||||||||| ||||||||||||||||| ||||    
T  4104216 tatatttatagtaaaagtataactcataaatttggaacaaataccacact---gatacgttttttttttctccttcagtgaaagaatatttgcataaaaa 4104312  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  4104313 atataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatac 4104366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 25533480 - 25533224
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc----tctcaaagtttagtctgatac 96  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||| |||||||    
T  25533480 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctgatac 25533381  T
Q  97 aaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgca 196  Q
    |||||||||||||||||||||  |||||||||||||||| ||||||||| |||||||||||||||         ||||||||| ||||||||||||||||    
T  25533380 aaggtctatatttatagtaaaagtataactcataaatttagaacaaatatcacactgaagatacgtttttt---tctccttcagtgaaagaatatttgca 25533284  T
Q  197 tcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25533283 tcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 25533224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 10621751 - 10622010
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc--------tctcaaagtttagtctgat 94  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||        ||||||||||||| |||||    
T  10621751 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagcaccctctatctctctctctctctcaaagtttagcctgat 10621850  T
Q  95 acaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttg 194  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||         ||||||||| ||||||||||||||    
T  10621851 acaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttt--tctccttcagtgaaagaatatttg 10621948  T
Q  195 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10621949 catcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 10622010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 42992324 - 42992076
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||  ||||||||||    
T  42992324 caaagagacaaactctatacaaaccctagttttgttgttgcctttttaaacccttgtttcagccccctctatctctcttaaagtttagcatgatacaagg 42992225  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    | |||||||||||||||  ||||||||||||||||||||  ||||  ||||||||||||||         ||||||||| ||||||||||||||||||||    
T  42992224 tatatatttatagtaaaagtataactcataaatttggaattaatattacactgaagatacgtttttttt-tctccttcagtgaaagaatatttgcatcaa 42992126  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42992125 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 42992076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 42990342 - 42990069
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc------------------tctcaaa 82  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  |||||||    
T  42990342 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtctctctctctcaaa 42990243  T
Q  83 gtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatg 182  Q
    ||||||  |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||          ||||||||| ||    
T  42990242 gtttagcatgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacattttttttttctccttcagtg 42990143  T
Q  183 aaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  42990142 aaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttcttcatacgatac 42990069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 53917885 - 53918127
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||||||| |||||||||||||||| |||||    || ||||| |||||| |||||||    
T  53917885 aagagacaaactctatacaaaccctagttttgttgttgtcattctaaaccattgtttcagccccctccatctc----aaggtttaatctgattcaaggtc 53917980  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    |||||||||||||||  ||||||||||||||||| ||| ||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  53917981 tatatttatagtaaaagtataactcataaatttgaaacgaataccacactgaagatacgtttttttt-tctccttcaatgaaagaatatttgcatcaaaa 53918079  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  53918080 atataatattccctttcaaaatatatttgcatcaaatcgttcttcata 53918127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 51943408 - 51943165
Alignment:
Q  2 aaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggt 101  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||     | ||||| |||||| ||||||    
T  51943408 aaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacctttgtttcagcaccctctatctcc----aggtttactctgattcaaggt 51943313  T
Q  102 ctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaa 201  Q
    ||||||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||         ||||||||||||||||||||||| |||||||    
T  51943312 ctatatttatagtaaaagtataaatcataaatttggaacgaataccacactgaagatacgtttttctt-tctccttcaatgaaagaatatttacatcaaa 51943214  T
Q  202 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51943213 aatataatattccctttcaaaatatatttgcatcaaatcattcttcata 51943165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 53915717 - 53915959
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    |||||||||  ||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||     || ||||| |||||| |||||||    
T  53915717 aagagacaaaatctatacaaaccctagttttgttgttgtcatcctaaacccttgtttcagccccctctatctt----aaggtttactctgattcaaggtc 53915812  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||||| ||||||||         ||||||||| ||||||||||||||||||||||    
T  53915813 tatatttatagtaaaagtataactcataaatttggaacgaataccacactcaagatacgtttttttt-tctccttcagtgaaagaatatttgcatcaaaa 53915911  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  53915912 atataatattccctttcaaaatatatttgcatcaaatcgttcttcata 53915959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 27635848 - 27636089
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||    |||||| ||||| ||| || |||||||    
T  27635848 aagagacaaactctatacaaaccctagttttgttgtttgcattctaaacccttgtttcagccccctcta----tctcaaggtttactctaattcaaggtc 27635943  T
Q  103 tatatttatagt-aaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaa 201  Q
    ||||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||          ||||||||| |||||||||||||||||||||    
T  27635944 tatatttgtagtaaaaaatataactcataaatttggaacgaataccacactgaagatac---atttttttctccttcagtgaaagaatatttgcatcaaa 27636040  T
Q  202 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27636041 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 27636089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 1313445 - 1313205
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||    || ||||| |||||| |||||||    
T  1313445 aagagacaaactctatacaaaccctagttttgttgttgccattgtaaacc-ttgtttcagccccctctatctc----aaggtttactctgattcaaggtc 1313351  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    |||||||||||||||  ||||||||||||||||||||| |||| |||||| |||||||          ||||||||| ||||||||||||||||||||||    
T  1313350 tatatttatagtaaaagtataactcataaatttggaacgaatatcacactaaagatac--tttttttttctccttcagtgaaagaatatttgcatcaaaa 1313253  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1313252 atataatattccctttcaaaatatatttgcatcaaatcgttcttcata 1313205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 41849188 - 41848921
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatct------ctctcaaagtttagtctgatac 96  Q
    ||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||      |||||||||||||| |||||||    
T  41849188 aagagacaaactctatacaaaccctagttttgttgttgttattctaaacccttgtttcagccccctctatctatctctctctcaaagtttagcctgatac 41849089  T
Q  97 aaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg--------nnnnnnnnctctccttcaatgaaagaa 188  Q
    || ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||                 |||| |||| | ||||||    
T  41849088 aatgtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttttttttttttctctttcagttaaagaa 41848989  T
Q  189 tatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  41848988 tatttgcatcaaaaatataatattccttttcaaaatatatttgcatcaaatcgttcttcatacgatac 41848921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 6561848 - 6561693
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| ||||| ||||||||||||    
T  6561848 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttactctgatacaagg 6561753  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg 161  Q
    ||||||||||||| | | |||||||||||||||||||||| |||| |||||||||||||||    
T  6561752 tctatatttatag-agaaatataactcataaatttggaacgaatatcacactgaagatacg 6561693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 10084608 - 10084724
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  || |||||||||    
T  10084608 caaagagacaaactctatacaaaccctagttttgttattgcctttctaaacccttgttccagccccctctatctctctcaaagtttgctccgatacaagg 10084707  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  10084708 tctatatttatagtaaa 10084724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 11170442 - 11170330
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||  ||||||||||||    
T  11170442 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaagg 11170347  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  11170346 tctatatttatagtaaa 11170330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 47149114 - 47149231
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagttta-gtctgatacaag 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  ||  |||||||||||    
T  47149114 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccctcaaggcctacatctgatacaag 47149213  T
Q  100 gtctatatttatagtaaa 117  Q
    ||||||||||||||||||    
T  47149214 gtctatatttatagtaaa 47149231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4308500 - 4308609
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||  ||||||||||||    
T  4308500 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaagg 4308595  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  4308596 tctatatttatagt 4308609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 6063670 - 6063779
Alignment:
Q  6 agacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctat 105  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||  | |||||||||||||||    
T  6063670 agacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta--tctctcaaagtttgctttgatacaaggtctat 6063767  T
Q  106 atttatagtaaa 117  Q
    ||||||||||||    
T  6063768 atttatagtaaa 6063779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 10191528 - 10191644
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||  || |||||||||    
T  10191528 caaagagacaaactctataaaaaccctagttttgttattgcctttctaaacccttgttccagccccctttatctctctcaaagtttgctccgatacaagg 10191627  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  10191628 tctatatttatagtaaa 10191644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 38890076 - 38889965
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |   ||||||||||    
T  38890076 aagagacaaactctatacaaaccctaattttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgct---atacaaggtc 38889980  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  38889979 tatatttatagtaaa 38889965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 11163188 - 11163076
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||  ||||||||||||    
T  11163188 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaagg 11163093  T
Q  101 tctatatttatagtaaa 117  Q
    ||||||||||| |||||    
T  11163092 tctatatttatcgtaaa 11163076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18097119 - 18097232
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||   ||||||| | ||||||||||    
T  18097119 caaagagacaaactctatacaaaccctagttttgttgttgccattctaaacccttgtttgagccccctctatctctc---aagtttactatgatacaagg 18097215  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  18097216 tctatatttatagtaaa 18097232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18099389 - 18099501
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||   ||||||| ||||||||||||    
T  18099389 caaagagacaaactctatacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctctc---aagtttactctgatacaagg 18099485  T
Q  101 tctatatttatagtaaa 117  Q
    |||||| ||||||||||    
T  18099486 tctata-ttatagtaaa 18099501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 24979745 - 24979607
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    |||||||||||| ||||||||||||    
T  24979745 caaagagacaaactctatacaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctcta----tctcaaagtttactctgatacaagg 24979650  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaat 144  Q
    | |||||||||||| ||  ||| ||| | |||||||||||||||    
T  24979649 tatatatttatagtgaaagtattactta-aaatttggaacaaat 24979607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 3859564 - 3859454
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  ||||||||||||||    
T  3859564 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaaggtc 3859469  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  3859468 tatatttatagtaaa 3859454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 27101400 - 27101513
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  | |||  ||||||||||||    
T  27101400 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagcctcctctatctctatctcaatttgctctgatacaagg 27101499  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  27101500 tctatatttatagt 27101513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 38210408 - 38210294
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||    
T  38210408 caaagagataaactctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctctcaaa--atagcctgatacaagg 38210311  T
Q  101 tctatatttatagtaaa 117  Q
     ||||||||||||||||    
T  38210310 cctatatttatagtaaa 38210294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 45882977 - 45882865
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||| |||||| | ||||||||||    
T  45882977 caaagagacaaaatctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcatagtttactatgatacaagg 45882882  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  45882881 tctatatttatagtaaa 45882865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 10958544 - 10958654
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    | ||||| ||||||||||||||    
T  10958544 aagagacaaactctatacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatcttt----atgtttactctgatacaaggtc 10958639  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  10958640 tatatttatagtaaa 10958654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 10956248 - 10956358
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||   | ||||| ||||||||||||||    
T  10956248 aagagacaaactctatacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatct-tc---atgtttactctgatacaaggtc 10956343  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  10956344 tatatttatagtaaa 10956358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 15780891 - 15780786
Alignment:
Q  8 acaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatat 107  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    |||| ||||||| |||||||||||||||||||    
T  15780891 acaaactctatacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctcta----tctccaagtttactctgatacaaggtctatat 15780796  T
Q  108 ttatagtaaa 117  Q
    ||||||||||    
T  15780795 ttatagtaaa 15780786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 35918168 - 35918277
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||| |||  | ||||||||||    
T  35918168 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc----aaaatttgctatgatacaagg 35918263  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  35918264 tctatatttatagt 35918277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 51727225 - 51727334
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    |||||||||||  ||||||||||||    
T  51727225 caaagagacaaactctatacataccctagttttgttgttgcctttctaaacccttgtttcagcccccttta----tctcaaagtttgctctgatacaagg 51727320  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  51727321 tctatatttatagt 51727334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1626902 - 1627014
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| |||||  ||||||||| |    
T  1626902 caaagagataaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaatg 1626997  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  1626998 tctatatttatagtaaa 1627014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 26720586 - 26720474
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     ||||||  ||||||||||||    
T  26720586 caaatagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttatttcagccccctctatctcc----aagtttgctctgatacaagg 26720491  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  26720490 tctatatttatagtaaa 26720474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30005879 - 30005801
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc 79  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30005879 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc 30005801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 50494035 - 50493928
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    |||||  | ||||||||||||    
T  50494035 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctc----agtttgctttgatacaaggtc 50493940  T
Q  103 tatatttatagt 114  Q
    ||||||||||||    
T  50493939 tatatttatagt 50493928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 5191689 - 5191579
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||| ||||||  |  |||||||||||    
T  5191689 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctccaagtttgcttagatacaaggtc 5191594  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  5191593 tatatttatagtaaa 5191579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 22114526 - 22114636
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||     ||||||  ||||||||||||||    
T  22114526 aagagacaaactctatacaaaccctagttttgtttttgcctttctaaacccttgtttcagccccttctatctcc----aagtttgctctgatacaaggtc 22114621  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  22114622 tatatttatagtaaa 22114636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 35777457 - 35777347
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||||||||||  | |||||||| |||    
T  35777457 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctcta----tctcaaagtttgctttgatacaatgtc 35777362  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  35777361 tatatttatagtaaa 35777347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 6066017 - 6066128
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||| |||||||||||  | ||||||||||||    
T  6066017 aagagacaaaatctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccc---ctctatctcaaagtttgctttgatacaaggtc 6066113  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  6066114 tatatttatagtaaa 6066128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 9604826 - 9604940
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta--tctctctcaaagtttagtctgatacaa 98  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||| |||||  ||| ||||||    
T  9604826 caaagagacaaactctatacaaatcctagttttgttgttgcctttctaaa-ccttgtttcagccccctctatctctctctcagagttttctctaatacaa 9604924  T
Q  99 ggtctatatttatagt 114  Q
    ||||||||||||||||    
T  9604925 ggtctatatttatagt 9604940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 47701814 - 47701926
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    |||||| |||||  ||||||||| |    
T  47701814 caaatagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccccttta----tctcaaggtttacactgatacaatg 47701909  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  47701910 tctatatttatagtaaa 47701926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 5522852 - 5522946
Alignment:
Q  19 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  |||||||||||||||||||||||||||||    
T  5522852 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaaggtctatatttatagtaaa 5522946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 43423684 - 43423794
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    || |||||   |||||||| |||    
T  43423684 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctttctc----aaggtttacagtgatacaatgtc 43423779  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  43423780 tatatttatagtaaa 43423794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12268184 - 12268297
Alignment:
Q  1 caaagagacaatctctatacaaaccctagtttt-gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaag 99  Q
    ||||||||||| ||||||||||||||||||||| ||||||| |||||||||| ||||||||||| |||||||    |||||||||||| |||||||||||    
T  12268184 caaagagacaaactctatacaaaccctagtttttgttgttgtctttctaaactcttgtttcagctccctcta----tctcaaagtttactctgatacaag 12268279  T
Q  100 gtctatatttatagtaaa 117  Q
     |||||||||||||||||    
T  12268280 ttctatatttatagtaaa 12268297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 28102223 - 28102295
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 75  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28102223 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 28102295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32264258 - 32264374
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||      | |||| ||||||||||||    
T  32264258 caaagagacaaactctatacaaactttagttttgttgttgcctttctaaacccttgtttgagccccctctatctcaaagttaatttactctgatacaagg 32264357  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  32264358 tctatatttatagtaaa 32264374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 43228329 - 43228220
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||     ||||||  |||||||||| |    
T  43228329 caaagagacaaactctatacaaacgctagttttgttgttgcctttctaaactcttgtttcagccccctctatctcc----aagtttgctctgatacaatg 43228234  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  43228233 tctatatttatagt 43228220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3314722 - 3314610
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    |||||| |||||  |||||||||      
T  3314722 caaagagacaaactctatacaaaccctagttttgttgttacctttctaaacccttatttcagccccctcta----tctcaaggtttacactgatacaata 3314627  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  3314626 tctatatttatagtaaa 3314610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 6231485 - 6231375
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    ||  ||||  ||||||||| |||    
T  6231485 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaatccttgtttcagcccgctctatctc----aagatttacactgatacaatgtc 6231390  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  6231389 tatatttatagtaaa 6231375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 18162700 - 18162590
Alignment:
Q  2 aaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtc-tgatacaagg 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||      ||| |||| ||||||| || ||||||||||    
T  18162700 aaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcatccc------tctatctccaagtttactcatgatacaagg 18162607  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  18162606 tctatatttatagtaaa 18162590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 28100262 - 28100372
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    || | ||| |||||||||| |      
T  28100262 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctc----aagggttactctgatacaacgct 28100357  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  28100358 tatatttatagtaaa 28100372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 43421636 - 43421746
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    |||||| |||||  ||||||||| |||    
T  43421636 aagagacaaacactatacaaaccctagttttgttgttgcctttctaaacccttgtttcaaccccttcta----tctcaaggtttacactgatacaatgtc 43421731  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  43421732 tatatttatagtaaa 43421746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 48361892 - 48362001
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||||| ||||||||||||||||| ||    |||||||||||| | ||||||||||||    
T  48361892 aagagacaaactctatacaaaccctagttttgttgttgtcattctaaa-ccttgtttcagccccctgta----tctcaaagtttactatgatacaaggtc 48361986  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  48361987 tatatttatagtaaa 48362001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 32219115 - 32219026
Alignment:
Q  19 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttata 112  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||||||||||||| |||||||||||||||||||||    
T  32219115 acaaactctagttttgttgttgcctttctgaacccttgtttcagccccctcta----tctcaaagtttagtcagatacaaggtctatatttata 32219026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 880671 - 880783
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||    |||||| |||||  ||||||||| |    
T  880671 caaagagacgaactctatacaaaccctagttttgttgttgccattctaaactcttgtttcagacccctcta----tctcaaggtttacactgatacaatg 880766  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  880767 tctatatttatagtaaa 880783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 28761662 - 28761784
Alignment:
Q  16 tatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagta 115  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    |||||| ||||| |||||| ||| ||||||||||||||||    
T  28761662 tatacaaaccctagttttgttgttgtctttctaaacccttgtttcaaccccctcta----tctcaaggtttactctgatgcaaagtctatatttatagta 28761757  T
Q  116 aacatataactcataaatttggaacaaa 143  Q
    ||  |||  |||||||| ||||||||||    
T  28761758 aaagtatccctcataaa-ttggaacaaa 28761784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29956724 - 29956646
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc 79  Q
    ||||||||||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||    
T  29956724 caaagagacaaactctatacaaaccctaattttgttgttgaatttctaaacccttgtttcagccccctctatctctctc 29956646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 3306837 - 3306708
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||| |||| ||||||||||||||||  |||||||||||||||||||||||||| |||||||    | |||||  ||||||||| |    
T  3306837 caaagagacaaactctattcaaatcctagttttgttgttgtatttctaaacccttgtttcagccccctatatctct----aggtttacactgatacaatg 3306742  T
Q  101 tctatatttatagtaaacatataactcataaatt 134  Q
    ||||||||||||||||| | ||  ||||||||||    
T  3306741 tctatatttatagtaaaaacatctctcataaatt 3306708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 28181060 - 28180950
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||  | |||||||||||||||    |||||| |||||  ||||||||| |    
T  28181060 caaagagacaaactctatacaaaccctagttttgttgttgtctttctaaacc--tatttcagccccctcta----tctcaaggtttacactgatacaatg 28180967  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  28180966 tctatatttatagtaaa 28180950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 43226119 - 43226015
Alignment:
Q  5 gagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtcta 104  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  |||||||||| |||||    
T  43226119 gagacaaactctatacaaacg-tagttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaatgtcta 43226025  T
Q  105 tatttatagt 114  Q
    ||||||||||    
T  43226024 tatttatagt 43226015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 5926983 - 5927095
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||| |||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||    || |||||  | ||||||| |    
T  5926983 caaatagacaaactctatacaaactctagttttgttgttgcatttctaaacccttgtttcagccctctctatctc----aaggtttacaccgatacaatg 5927078  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  5927079 tctatatttatagtaaa 5927095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 25388942 - 25388824
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcag------ccccctctatctctctcaaagtttagtctgatac 96  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||      | | |||| |||||||||||   ||| |||||||    
T  25388942 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagctctctctctctctctctctctcaaa--atagcctgatac 25388845  T
Q  97 aaggtctatatttatagtaaa 117  Q
    |||||||||||||||||||||    
T  25388844 aaggtctatatttatagtaaa 25388824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 28137532 - 28137626
Alignment:
Q  19 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    |||||| ||||| |||||||||| |  |||||||||||||||    
T  28137532 acaaactctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttactctgatacaacgcatatatttatagtaaa 28137626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 53468675 - 53468786
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| ||    ||| || |||||  ||||||||| |    
T  53468675 caaagagacaaactctatacaaacc-tggttttgttgttgccattctaaacccttgtttcagcccccttta----tctaaaggtttacactgatacaatg 53468769  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  53468770 tctatatttatagtaaa 53468786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 36011864 - 36011753
Alignment:
Q  2 aaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggt 101  Q
    |||||||||| ||||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||| ||||||    || |||||  || |||||| ||    
T  36011864 aaagagacaaactctatacaaaccttagtttcgttgttgtctttctaaatccttgtttcagccccctttatctc----aaggtttacactaatacaatgt 36011769  T
Q  102 ctatatttatagtaaa 117  Q
    ||||||||||||||||    
T  36011768 ctatatttatagtaaa 36011753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 51674992 - 51675103
Alignment:
Q  19 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaac 118  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    || |||||   |||||||| ||||||||||||||||||     
T  51674992 acaaaccttagttttgttgttgtctttctaaacccttgtttcagccccctctatctc----aacgtttacattgatacaacgtctatatttatagtaaaa 51675087  T
Q  119 atataactcataaatt 134  Q
    | ||  ||||||||||    
T  51675088 acatccctcataaatt 51675103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 54691795 - 54691904
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| | ||||||||||||     || ||||| |||||||||| | |    
T  54691795 aagagacaaactctatacaaaccctagttttgttgtcgcctttctaaaaccttgtttta-ccccctctatctt----aaggtttactctgatacaaagcc 54691889  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  54691890 tatatttatagtaaa 54691904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 23633483 - 23633359
Alignment:
Q  15 ctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagt 114  Q
    ||||||||||||||||||| |||||| ||| ||||| |||||||| ||||| |||||||||    || ||||| |||||||||| |||||||||||||||    
T  23633483 ctatacaaaccctagttttcttgttggctt-ctaaatccttgttttagccctctctatctc----aaggtttactctgatacaaagtctatatttatagt 23633389  T
Q  115 aaacatataactcataaatttggaacaaat 144  Q
    |||  |||  |||||||| |||||||||||    
T  23633388 aaaagtatccctcataaaattggaacaaat 23633359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 39715507 - 39715400
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||| |||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||     ||| |||||| |||||  ||||||||| |    
T  39715507 caaatagacaaactctatacaaaccctagttttggtgttgcctctctaaacccttatttcagcccc-----tctatctcaaggtttacactgatacaatg 39715413  T
Q  101 tctatatttatag 113  Q
    |||||||||||||    
T  39715412 tctatatttatag 39715400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 1321441 - 1321367
Alignment:
Q  39 tgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||||||||||||||||||||||||    |||||||||||  |||||||||| ||||||||||||||||||    
T  1321441 tgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaaagtctatatttatagtaaa 1321367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 53591215 - 53591121
Alignment:
Q  19 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||    || |||||  || |||||| ||||||||||||||||||    
T  53591215 acaaaccctagttttgttgttgtctttctaaactcttgtttcagcctcctctatctc----aaggtttacacttatacaatgtctatatttatagtaaa 53591121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 53597265 - 53597143
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttata 112  Q
    |||||||||| |||||||||| |||||| |||  ||||||||||||||| ||||     ||| |||||| ||||| ||||||||||||||||||||||||    
T  53597265 ctctatacaacccctagttttcttgttgactta-taaacccttgtttcatcccc-----tctatctcaaggtttactctgatacaaggtctatatttata 53597172  T
Q  113 gtaaacatataactcataaatttggaaca 141  Q
    |||||  |||  |||||||| ||||||||    
T  53597171 gtaaaagtatccctcataaaattggaaca 53597143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 23637052 - 23636926
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttata 112  Q
    ||||||||||||||||||||| |||||| ||| |||||||||||||| |||| ||||||    |||||| ||||| |||||||||| || ||||||||||    
T  23637052 ctctatacaaaccctagttttcttgttggctt-ctaaacccttgttttagcctcctcta----tctcaaggtttactctgatacaaagtatatatttata 23636958  T
Q  113 gtaaacatataactcataaatttggaacaaat 144  Q
     ||||  |||  |||||||| ||| |||||||    
T  23636957 ttaaaattatccctcataaaattgaaacaaat 23636926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 889992 - 890102
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||| |||||| ||||||||||||||||| |||  ||||||| ||||||||||||||||||||  ||||||    |||||| |||||  |||||||||      
T  889992 caaatagacaaactctatacaaaccctaggttt--tgttgccattctaaacccttgtttcagcttcctcta----tctcaaggtttacactgatacaata 890085  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  890086 tctatatttatagtaaa 890102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 31151374 - 31151273
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttg-tttcagccccctctatctctctcaaagttta-gtctgatacaaggtctatattta 110  Q
    ||||||||||||||||||||| ||||||  |||||||||||||| |||||||||||||||    |||| | |||||  |||||||||| |||||||||||    
T  31151374 ctctatacaaaccctagttttcttgttg-atttctaaacccttgttttcagccccctcta----tctcgaggtttacatctgatacaaagtctatattta 31151280  T
Q  111 tagtaaa 117  Q
    |||||||    
T  31151279 tagtaaa 31151273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 4560502 - 4560558
Alignment:
Q  19 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 75  Q
    |||||| |||||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  4560502 acaaactctagttttgttgttacctttataaaccattgtttcagccccctctatctc 4560558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 144
Target Start/End: Original strand, 1618916 - 1619016
Alignment:
Q  43 tttctaaacccttgttt-cagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaaca 141  Q
    ||||||||||||||||| ||||||||||| ||||||  || ||||| | || ||||||||||||||||||||| ||  |||  |||||||| ||||||||    
T  1618916 tttctaaacccttgttttcagccccctctgtctctc--aaggtttactatggtacaaggtctatatttatagtcaaagtatccctcataaaattggaaca 1619013  T
Q  142 aat 144  Q
    |||    
T  1619014 aat 1619016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 6719392 - 6719442
Alignment:
Q  67 ctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||| |||||||||||||||  |||||||||||||||||||||||||||||    
T  6719392 ctctctctctctcaaagtttgctctgatacaaggtctatatttatagtaaa 6719442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 28413253 - 28413299
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaa 49  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||    
T  28413253 aagagacaaactctatacaaaccctagttttgttgttgcttttctaa 28413299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 54884170 - 54884121
Alignment:
Q  26 ctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 75  Q
    |||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  54884170 ctagttttgttgttgcctttctaaacccttgttcgagctccctctatctc 54884121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 4666545 - 4666489
Alignment:
Q  19 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 75  Q
    |||||||||| ||||||||||| ||| ||| |||||| |||||||||||||||||||    
T  4666545 acaaaccctatttttgttgttgtcttactagacccttctttcagccccctctatctc 4666489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 24177305 - 24177205
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttg-tttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttat 111  Q
    ||||||||||||||||||||| |||||| |  ||||||| |||| |||||||||||||||     ||||| ||||| | |||||||||||||||||||||    
T  24177305 ctctatacaaaccctagttttcttgttgac-atctaaactcttgttttcagccccctcta----gctcaatgtttactatgatacaaggtctatatttat 24177211  T
Q  112 agtaaa 117  Q
    | ||||    
T  24177210 aataaa 24177205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 6719357 - 6719394
Alignment:
Q  42 ctttctaaacccttgtttcagccccctctatctctctc 79  Q
    |||||||||||||| |||||||||||||||||||||||    
T  6719357 ctttctaaacccttatttcagccccctctatctctctc 6719394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 25635377 - 25635319
Alignment:
Q  86 tagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaat 144  Q
    ||||||||||||| ||||||||||||||||||   ||  |||||||| |||||||||||    
T  25635377 tagtctgatacaaagtctatatttatagtaaaagcatccctcataaaattggaacaaat 25635319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 36871530 - 36871583
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccc 67  Q
    |||||||||| |||||||||| |||||| |||  |||||||||||||||||||||    
T  36871530 ctctatacaagccctagttttcttgttggcttg-taaacccttgtttcagccccc 36871583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 27101540 - 27101588
Alignment:
Q  66 cctctatctctctcaaagtttagtctgatacaaggtctatatttatagt 114  Q
    ||||||||||||||  | |||  ||||||||||||||||||||||||||    
T  27101540 cctctatctctctctcaatttgctctgatacaaggtctatatttatagt 27101588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 89)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 21948410 - 21948666
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21948410 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtatgatacaagg 21948509  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnct-ctccttcaatgaaagaatatttgcatca 199  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||         | |||||||  |||||||||||||||||||    
T  21948510 tctatatttatagtaaacatataactcataaatttggaacgaataccacactgaagatacgttttttttttcctccttctgtgaaagaatatttgcatca 21948609  T
Q  200 aaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21948610 aaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 21948666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 31735746 - 31735998
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||| |||||||||||||    
T  31735746 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctcattcaaagtttagcctgatacaaggtc 31735845  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||         ||||||||| ||||||||||||||||||||||    
T  31735846 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgtttttttt-tctccttcagtgaaagaatatttgcatcaaaa 31735944  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31735945 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 31735998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 47906328 - 47906073
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatacaa 98  Q
    ||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  47906328 caaagagacaaactctatacaaaccatagttttgttgttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaa 47906229  T
Q  99 ggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatc 198  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||    
T  47906228 ggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatac--tttttttttctccttcaatgaaagaatatttgcatc 47906131  T
Q  199 aaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47906130 aaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 47906073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 39932131 - 39931879
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| ||||||||    
T  39932131 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatc--tctcaaagttttgtctcatacaagg 39932034  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||         ||||||||||| ||||||||||||||||||    
T  39932033 tctatatttatagtaaacatataactcataaatttggaacgaatactacactgaagatacgtttttttt-tctccttcaataaaagaatatttgcatcaa 39931935  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39931934 aagtataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 39931879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 3 - 255
Target Start/End: Original strand, 9463469 - 9463722
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc--tctcaaagtttagtctgatacaagg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  9463469 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaagg 9463568  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||         ||||||||||||||||||||||||||||||    
T  9463569 tctatatttatagtaaaagtataactcataaatttggaacaaataccacaatgaagatacgtttttttt-tctccttcaatgaaagaatatttgcatcaa 9463667  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgata 255  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  9463668 aaatataatattccctttcaaaatatatttgcattaaattgttcttcatacgata 9463722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 27339355 - 27339609
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  27339355 aagagacaaactctatacaaaccctagttttattgttgcctttctaagcccttgtttcagccccctctatctctctcaaagtttagcctaatacaaggtc 27339454  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg-nnnnnnnnctctccttcaatgaaagaatatttgcatcaaa 201  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||          | ||||||| |||||||||||||||||||||    
T  27339455 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttcttttttttttccttcagtgaaagaatatttgcatcaaa 27339554  T
Q  202 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27339555 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 27339609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 2510547 - 2510800
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2510547 caaagagacaaactctatacaaaccctagttttgtggttgcctttataaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaagg 2510646  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnct----ctccttcaatgaaagaatatttgca 196  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||        ||    |||||||| ||||||||||||||||    
T  2510647 tctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaaaatacgttttttttctttccctccttcagtgaaagaatatttgca 2510746  T
Q  197 tcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2510747 tcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttcttcata 2510800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 9459642 - 9459890
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc--tctcaaagtttagtctgatacaagg 100  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  9459642 aagagacaaactctatacaaaccctagttttgttgttgactttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaagg 9459741  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||         ||||||||||||||||||||||||||||||    
T  9459742 tctatatttatagtaaaagtataactcataaatttggaacaaataccacaatgaagatacgtttttttt-tctccttcaatgaaagaatatttgcatcaa 9459840  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  9459841 aaatataatattccctttcaaaatatatttgcattaaattgttcttcata 9459890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 15295057 - 15295322
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc----------tctcaaagtttagtc 90  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||          |||||||||||  ||    
T  15295057 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccctctctatctctctctctctctctcaaagtttgctc 15295156  T
Q  91 tgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaata 190  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||          ||||||||| ||||||||||    
T  15295157 tgatacaaggtctatatttatagtaaacatataactcataaattaggaacgaataccacactgaagatacattttttttttctccttcagtgaaagaata 15295256  T
Q  191 tttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  15295257 tttgcatcaaaaatataatattcgctttcaaaatatatttgcatcaaatcgttcttcatacgatac 15295322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 24325721 - 24325464
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc----aaagtttagtctgatac 96  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||||||  ||||||||    
T  24325721 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaa-cccttgtttcagccccctctatctctctctctcaaagtttgctctgatac 24325623  T
Q  97 aaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgca 196  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||          ||||||||| ||||||||||||||||    
T  24325622 aaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactaaagatac-atttttttttctccttcagtgaaagaatatttgca 24325524  T
Q  197 tcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  24325523 tcaaaaatataatattcactttcaaaatatatttgcatcaaatcgttcttcatacgatac 24325464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 14 - 256
Target Start/End: Original strand, 27337174 - 27337415
Alignment:
Q  14 tctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatag 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  27337174 tctataaaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctaatacaaggtctatatttatag 27337273  T
Q  114 taaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaaatataatattc 213  Q
    ||||  |||||| ||||||||||||||||||||||||  |||||||||         | ||||||| | |||||||||||||||||||||||||||||||    
T  27337274 taaaagtataacgcataaatttggaacaaataccacatcgaagatacgtttttttt-tttccttcagttaaagaatatttgcatcaaaaatataatattc 27337372  T
Q  214 cctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  27337373 cctttcaaaatatatttgcatcaaatcgttcttcatacgatac 27337415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 46431932 - 46432202
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccc-----------------tctatctctctcaaagtt 85  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||                 ||| ||||||||||||||    
T  46431932 aagagacaaactctatacaaaccctacttttgttgttgcctttctaaacccttgtttcagcccccatctctctctctctctctctctctctctcaaagtt 46432031  T
Q  86 tagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaa 185  Q
    ||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||         ||||||||| |||||    
T  46432032 tagcctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacagtgaagatacgttttttttttctccttcagtgaaa 46432131  T
Q  186 gaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46432132 gaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 46432202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 28998481 - 28998710
Alignment:
Q  6 agacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctat 105  Q
    |||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||    |||||||||||| |||||| ||| ||||||    
T  28998481 agacaaactctatacaaaccctagttttgttgttgtcattctaaacccttgtttcagcctcctcta----tctcaaagtttactctgattcaaagtctat 28998576  T
Q  106 atttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaaata 205  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||| || |||||         ||||||||| |||||||||||||||||||||||||    
T  28998577 atttatagtaaaagtataactcataaatttggaacgaataccacactaaatatacggtttttttttctccttcagtgaaagaatatttgcatcaaaaata 28998676  T
Q  206 taatattccctttcaaaatatatttgcatcaaat 239  Q
    ||||||||||||||||||||||||||||||||||    
T  28998677 taatattccctttcaaaatatatttgcatcaaat 28998710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 29004197 - 29004426
Alignment:
Q  6 agacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctat 105  Q
    |||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||    |||||||||||| |||||| ||| ||||||    
T  29004197 agacaaactctatacaaaccctagttttgttgttgtcattctaaacccttgtttcagcctcctcta----tctcaaagtttactctgattcaaagtctat 29004292  T
Q  106 atttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaaata 205  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||| || |||||         ||||||||| |||||||||||||||||||||||||    
T  29004293 atttatagtaaaagtataactcataaatttggaacgaataccacactaaatatacggtttttttttctccttcagtgaaagaatatttgcatcaaaaata 29004392  T
Q  206 taatattccctttcaaaatatatttgcatcaaat 239  Q
    ||||||||||||||||||||||||||||||||||    
T  29004393 taatattccctttcaaaatatatttgcatcaaat 29004426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 48665235 - 48664975
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatacaa 98  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||   |||| ||  || ||||| |||||| |||    
T  48665235 caaagagacaaactctatataaaccctagttttgttgttgcctttctaaacccttgtttcaaccccctccccctctatcttaaggtttactctgattcaa 48665136  T
Q  99 ggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnct---------ctccttcaatgaaagaat 189  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||         |          | |||||||||||||||    
T  48665135 ggtctatatttatagtaaaagtataactcataaatttggaacaaatactacactgaagatacgttttttttttttttttttctttcttcaatgaaagaat 48665036  T
Q  190 atttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48665035 atttgcatcaaaaatataatattccctttcaaaatatatgtgcatcaaatcgttcttcata 48664975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 4 - 250
Target Start/End: Original strand, 17324862 - 17325104
Alignment:
Q  4 agagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtct 103  Q
    |||||||| |||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||||   |||  ||||| |||| | ||||||||    
T  17324862 agagacaaactctatacaaaccccagttttgttgttgccattctaaacccttgttttagccccctgtatct---tcag-gtttactctggttcaaggtct 17324957  T
Q  104 atatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaaa 203  Q
    ||||||||||||||  ||||||||||||||||||||| |||| ||| |||||||||||         ||||||||| ||||||||||||||||| |||||    
T  17324958 atatttatagtaaaagtataactcataaatttggaacgaatatcaccctgaagatacgttttttttttctccttcagtgaaagaatatttgcataaaaaa 17325057  T
Q  204 tataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  17325058 tataatattcccttgcaaaatatatttgcatcaaatcgtttttcata 17325104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 2949456 - 2949692
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||    || ||||  || ||| |||  ||    
T  2949456 aagagacaaactctatacaaactctagttttgttgttgtcattctaaacccttgtttcagccccctctatctc----aaggttttctcggattcaatatc 2949551  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    ||||||||| |||||  ||||||||||||||||||||| |||||||      |||||||         |||| |||| |||||||||||||| |||||||    
T  2949552 tatatttattgtaaaagtataactcataaatttggaacgaatacca------agatacgttttttttttctc-ttcagtgaaagaatatttgtatcaaaa 2949644  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  2949645 atataatattccctttcaaaatatatttgcatcaaatcattcttcata 2949692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 47177418 - 47177304
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  47177418 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaggtc 47177319  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  47177318 tatatttatagtaaa 47177304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 47179769 - 47179655
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  47179769 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaggtc 47179670  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  47179669 tatatttatagtaaa 47179655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 12302730 - 12302845
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagttta-gtctgatacaaggt 101  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  12302730 aagagacaaactctatacaaaccctagttttgttgttgcatttctaaacccttgtttcagccccctctatctctctcaaggtttacatctgatacaaggt 12302829  T
Q  102 ctatatttatagtaaa 117  Q
    ||||||||||||||||    
T  12302830 ctatatttatagtaaa 12302845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 13215139 - 13215027
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||| |||| ||||||||||||    
T  13215139 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaaatttactctgatacaagg 13215044  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  13215043 tctatatttatagtaaa 13215027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 28842551 - 28842439
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||  |||||||||||||     
T  28842551 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatc--tctcaaagtttgctctgatacaaggtt 28842454  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  28842453 tatatttatagtaaa 28842439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 41646978 - 41646866
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    |||||||||||| ||||||||||||    
T  41646978 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttatttcagccccctcta----tctcaaagtttactctgatacaagg 41646883  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  41646882 tctatatttatagtaaa 41646866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 6995923 - 6996065
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    ||  |||| |||||| |||||    
T  6995923 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaaccgttgtttcggccccctctatctc----aagatttactctgattcaagg 6996018  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaatacc 147  Q
    |||||||||||| ||||  ||||||||||||||||||||| ||||||    
T  6996019 tctatatttataataaaagtataactcataaatttggaacgaatacc 6996065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15823604 - 15823492
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    ||||||| | ||||||||||    
T  15823604 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctttatctct----aagtttactttgatacaagg 15823509  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  15823508 tctatatttatagtaaa 15823492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 28207289 - 28207401
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| || || |||||||||||||||||||||| ||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  28207289 caaagagacaaactttacacaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctcta----tctcaaagtttagtctgatacaagg 28207384  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  28207385 tctatatttatagtaaa 28207401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 38925701 - 38925813
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    |||||||||||| ||||||||||||    
T  38925701 caaagagacaaactctatacaaaccctagttttgttgttgcctttctgaactcttgtttcagccccctcta----tctcaaagtttactctgatacaagg 38925796  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  38925797 tctatatttatagtaaa 38925813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 20302515 - 20302405
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||  ||||||||||||||    
T  20302515 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaaggtc 20302420  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||| ||||    
T  20302419 tatatttataataaa 20302405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 51750095 - 51749985
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  ||||||||||||||    
T  51750095 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaaggtc 51750000  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  51749999 tatatttatagtaaa 51749985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 28840736 - 28840624
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||  |||||||||||||  ||||||||||||||    
T  28840736 aagagacaaactctatacaaaccctagttttgttgtttcctttctaaacccttgtttcatccccctgta--tctctcaaagtttgctctgatacaaggtc 28840639  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  28840638 tatatttatagtaaa 28840624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 6823071 - 6822961
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||  ||||||||||||||    
T  6823071 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaaggtc 6822976  T
Q  103 tatatttatagtaaa 117  Q
    |||||  ||||||||    
T  6822975 tatataaatagtaaa 6822961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 47451704 - 47451594
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||    |||||||||||| ||||||||||||||    
T  47451704 aagagacaaactctatacaaaccctagttttgttgttgccattccaaacccttgtttaagccccctcta----tctcaaagtttactctgatacaaggtc 47451609  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  47451608 tatatttatagtaaa 47451594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 2617574 - 2617465
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    |||||||||||  ||||||||||||    
T  2617574 caaagagacaaactctatacaaaccctagttttgttgttgtctttctaaacccttgtttcagcctcctcta----tctcaaagtttgctctgatacaagg 2617479  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  2617478 tctatatttatagt 2617465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 13761895 - 13761783
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||     ||||||  ||||||||||||    
T  13761895 caaagagacaaactctatacaaaccctagttatgttgttgcctttctaaacccttgtttcagccctctctatctcc----aagtttgctctgatacaagg 13761800  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  13761799 tctatatttatagtaaa 13761783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 6823941 - 6823830
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||| |||||||||||  ||||||||||||||    
T  6823941 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccc---ctctatctcaaagtttgctctgatacaaggtc 6823845  T
Q  103 tatatttatagtaaa 117  Q
    |||||  ||||||||    
T  6823844 tatataaatagtaaa 6823830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 26520352 - 26520580
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgttt-cagccccctctatctctctcaaagtttagtctgatacaaggtctatatttat 111  Q
    ||||||| ||||||||||||| |||||| ||| ||||||| |||||| ||||||||    ||| |||||| ||||| |||||||||| ||||||||||||    
T  26520352 ctctatagaaaccctagttttcttgttgactt-ctaaaccgttgttttcagcccccc---tctatctcaaggtttactctgatacaaagtctatatttat 26520447  T
Q  112 agtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnct------ctccttcaatgaaagaatatttgcatcaaaaata 205  Q
    ||  || |||||||| ||||||||||||| |||| ||||||||||||||          |      || ||||  |||||||||||||||||||||||||    
T  26520448 agagaa-atataacttataaatttggaacgaatatcacactgaagatacatttcttttgtttttttcttcttcggtgaaagaatatttgcatcaaaaata 26520546  T
Q  206 taatattccctttcaaaatatatttgcatcaaat 239  Q
    ||||||||||||||||||||||||||||||||||    
T  26520547 taatattccctttcaaaatatatttgcatcaaat 26520580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 14098194 - 14098302
Alignment:
Q  2 aaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggt 101  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||    |||||||||||||| |||||||||||    
T  14098194 aaagagacaaactctatacaaaccctagttttgtagttgcctttttaaaccattgtttcagtcccctcta----tctcaaagtttagtttgatacaaggt 14098289  T
Q  102 ctatatttatagt 114  Q
    |||||||||||||    
T  14098290 ctatatttatagt 14098302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 18307167 - 18307059
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| |||||  ||||||||| |    
T  18307167 caaagagacaaactttatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaatg 18307072  T
Q  101 tctatatttatag 113  Q
    |||||||||||||    
T  18307071 tctatatttatag 18307059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 31423097 - 31423236
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| |||||  ||||||||| |    
T  31423097 caaagagacaaactctatataaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaatg 31423192  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaat 144  Q
      |||||||||||||||  |||  | |||||| |||||||||||    
T  31423193 cttatatttatagtaaaagtatctcccataaaattggaacaaat 31423236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 39462577 - 39462439
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||||||| |||||||||||  |||||    |||||||||||| ||||||||||||    
T  39462577 caaagagacaaactctatacaaaccctagttttgtttttgcatttctaaacctttgtttcagccttctcta----tctcaaagtttactctgatacaagg 39462482  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaat 144  Q
    |||||||||||||| ||  ||| ||| | |||||||||||||||    
T  39462481 tctatatttatagtgaaagtattactta-aaatttggaacaaat 39462439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 10400053 - 10400159
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |    |||||  ||||||||||||||    
T  10400053 aagagacaaactctatacaaaccctagttttgttgttgtcattctaaacccttgtttcagccccctctatctccc----agtttgctctgatacaaggtc 10400148  T
Q  103 tatatttatag 113  Q
    |||||||||||    
T  10400149 tatatttatag 10400159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 16226223 - 16226113
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||    |||||||||||  | ||||||||||||    
T  16226223 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccttgttttagacccctcta----tctcaaagtttgctttgatacaaggtc 16226128  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  16226127 tatatttatagtaaa 16226113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 20291513 - 20291403
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    ||| |||  ||| ||||||||||    
T  20291513 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcatctccctctatctc----aaaatttgctctaatacaaggtc 20291418  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  20291417 tatatttatagtaaa 20291403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 3579841 - 3579953
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |  ||| ||||||| ||||  |||||||||||||    
T  3579841 aagagacaaactctatacaaaccctagttttgttgctgcctttctgaacccttgtttcagccccccc--tctatctcaaattttacgctgatacaaggtc 3579938  T
Q  103 tatatttatagtaaa 117  Q
    |||||||| ||||||    
T  3579939 tatatttaaagtaaa 3579953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 16428709 - 16428638
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatct 74  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16428709 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatct 16428638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 17318949 - 17318814
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| ||||| | ||||||||   |    
T  17318949 aagagacaaactctaaacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttactatgatacaaaacc 17318854  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaa 143  Q
    ||||||||||||||| | ||  |||||||| ||||||||||    
T  17318853 tatatttatagtaaaaaaatccctcataaa-ttggaacaaa 17318814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 25127928 - 25127815
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc--tctcaaagttta-gtctgatacaag 99  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||| |||||  ||| |||||||    
T  25127928 aagacacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcaggcccctctatctctctctcaaggtttacatctaatacaag 25127829  T
Q  100 gtctatatttatag 113  Q
    || |||||||||||    
T  25127828 gtttatatttatag 25127815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 17186353 - 17186463
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    || ||||  ||||||||||  ||    
T  17186353 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttatttcagccccctctatctc----aaggtttgctctgatacaaaatc 17186448  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||| ||||    
T  17186449 tatatttatattaaa 17186463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 25251500 - 25251610
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |  ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    |||||| ||||| |||||||||| |||    
T  25251500 aagagacaaacgttatacaaaccctagttttgttgttgtctttctaaacctttgtttcagccccctcta----tctcaaggtttactctgatacaaagtc 25251595  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  25251596 tatatttatagtaaa 25251610  T

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Target: chr1; HSP #50
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 51752421 - 51752311
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||||||||||     ||||||  ||||||||||||||    
T  51752421 aagagacaaactctatacaagccctaattttgttgttacctttctaaactcttgtttcagccccctctatctcc----aagtttgctctgatacaaggtc 51752326  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  51752325 tatatttatagtaaa 51752311  T

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Target: chr1; HSP #51
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4131602 - 4131678
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctc 77  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  4131602 caaagagacaaactctatacaaaccctagttttgttgttgccattctaaatccttgtttcagccccctctatctctc 4131678  T

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Target: chr1; HSP #52
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 6115478 - 6115541
Alignment:
Q  171 tctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6115478 tctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 6115541  T

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Target: chr1; HSP #53
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 11457710 - 11457810
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttata 112  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    |||||| |||||  ||||||||| |||||||||||||    
T  11457710 ctctatacaaaccctagttttgttgttgtctttctaaaccattgtttcagccccctcta----tctcaaggtttacactgatacaatgtctatatttata 11457805  T
Q  113 gtaaa 117  Q
    |||||    
T  11457806 gtaaa 11457810  T

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Target: chr1; HSP #54
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18839645 - 18839571
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 75  Q
    |||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18839645 caaagagataaactctatacaaaccctagttttgttgttgcctatctaaacccttgtttcagccccctctatctc 18839571  T

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Target: chr1; HSP #55
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31425242 - 31425316
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 75  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31425242 caaagatacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctttatctc 31425316  T

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Target: chr1; HSP #56
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 4131690 - 4131758
Alignment:
Q  181 tgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4131690 tgaaagaatatttgcatcaaaa-tataatattccctttcaaaatatatttgcatcaaatcgttcttcata 4131758  T

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Target: chr1; HSP #57
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 50079046 - 50079156
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||    || |||||  || |||||| |||    
T  50079046 aagagacaaactctatgcaaaccctagttttgttgctgtctttctaaacccttgtttcagccccctctatctc----aaggtttacactaatacaatgtc 50079141  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  50079142 tatatttatagtaaa 50079156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 9241311 - 9241421
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    ||| ||| || ||||| |||||||||| | |    
T  9241311 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaa-ccttgtttcagccccc---ctctatcttaaggtttactctgatacaaagcc 9241406  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  9241407 tatatttatagtaaa 9241421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 25248756 - 25248841
Alignment:
Q  20 caaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatattt 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| ||||| |||||||||| ||||||||||    
T  25248756 caaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttactctgatacaaagtctatattt 25248841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 6756585 - 6756514
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctat 72  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  6756585 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaagcccttgtttcagtcccctctat 6756514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 16231641 - 16231547
Alignment:
Q  19 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||||||||||||    |||||||||||  | |||||||||||||||||||||||||||    
T  16231641 acaaaccctagttttcttgttgcttttctagacccttgtttcagccccctcta----tctcaaagtttgctttgatacaaggtctatatttatagtaaa 16231547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 31489959 - 31489861
Alignment:
Q  15 ctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagt 114  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    || |||||  || |||||| |||||||||||||||    
T  31489959 ctatacaaaccctagttttgttgttacctttctaaacccttgtttcaaccccctctatctc----aaggtttacactaatacaatgtctatatttatagt 31489864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 50076897 - 50077007
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||||| |||||||||||||    || ||| |||||| |||||  ||||||||| |||    
T  50076897 aagagacaaactttatacaaaccctagttttgttgttgtctttctaaatccttgtttcagcc----ctttctatctcaaggtttacactgatacaatgtc 50076992  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  50076993 tatatttatagtaaa 50077007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 45693834 - 45693901
Alignment:
Q  183 aaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  45693834 aaagaatatttgcataaaaaatatattattctctttcaaaatatatttgcatcaaatcgttcttcata 45693901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 50307770 - 50307882
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||    || | |||||| ||||| | |||||||| |    
T  50307770 caaagagacaaactctatacaaaccctagttttgttattgcctttctaaacccttttttcagcccc----atatatctcaaggtttactttgatacaaag 50307865  T
Q  101 tctatatttatagtaaa 117  Q
      |||||||||||||||    
T  50307866 cttatatttatagtaaa 50307882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 42922279 - 42922153
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttata 112  Q
    ||||||||||||||||||||| |||||| ||| |||||||||| ||||| ||||||||||||     || ||||| ||||||||||  ||||||||||||    
T  42922279 ctctatacaaaccctagttttcttgttgactt-ctaaacccttatttcaaccccctctatctt----aaggtttactctgatacaaaatctatatttata 42922185  T
Q  113 gtaaacatataactcataaatttggaacaaat 144  Q
    |||||  |||  ||||||||||||||||||||    
T  42922184 gtaaaagtatccctcataaatttggaacaaat 42922153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 6115532 - 6115600
Alignment:
Q  188 atatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||    
T  6115532 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcattcatacgatac 6115600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 8347501 - 8347631
Alignment:
Q  9 caatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttag-tctgatacaaggtctatat 107  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||||||||||| |||||||||||||    || |||||  ||||||||||||||||| |    
T  8347501 caatctctatacaaaccctagttttcttgttgactt-ctaaacccttgtttcaaccccctctatctc----aaggtttacatctgatacaaggtctat-t 8347594  T
Q  108 ttatagtaaacatataactcataaatttggaacaaat 144  Q
    ||||||||||  ||   |||||||| |||||||||||    
T  8347595 ttatagtaaaagtacccctcataaaattggaacaaat 8347631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 50248795 - 50248907
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||| ||| | |||||||||||||| |||| |||||| |||||||||| |||||||    |||||| |||||  ||||||||| |    
T  50248795 caaagagacaaactctatataaatcatagttttgttgttgtctttttaaacctttgtttcagctccctcta----tctcaaggtttacactgatacaatg 50248890  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  50248891 tctatatttatagtaaa 50248907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 18800805 - 18800904
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttata 112  Q
    ||||||||||||| ||||||| |||||| | ||||||||| ||||||||||||| | ||    |||||| ||||| ||||||||||||||||||||||||    
T  18800805 ctctatacaaaccgtagttttcttgttgac-ttctaaacctttgtttcagccccttgta----tctcaaggtttactctgatacaaggtctatatttata 18800899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 16432445 - 16432396
Alignment:
Q  19 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccct 68  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16432445 acaaaccctagttttgttgttgcctttctaaacccttgtttctgccccct 16432396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 14183824 - 14183921
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttata 112  Q
    ||||||||||||||||||||   |||||| || |||||||||||||||||||| |||||||||    || ||||| ||||||||| ||||||||||||||    
T  14183824 ctctatacaaaccctagtttg--tgttgcatt-ctaaacccttgtttcagccctctctatctc----aaggtttactctgatacatggtctatatttata 14183916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 49495468 - 49495561
Alignment:
Q  47 taaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaat 144  Q
    |||||||||||||||||||||||||||||    || ||||| |||||||||| ||||||||||||||||||  |||  |||||||| || ||||||||    
T  49495468 taaacccttgtttcagccccctctatctc----aaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaaattcgaacaaat 49495561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 6996221 - 6996152
Alignment:
Q  175 cttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||      |||| |||||||||||||||||||    
T  6996221 cttcagtgaaagaatatttgcaacaaaaatataatattccctttca------atttacatcaaatcgttcttcata 6996152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 26613503 - 26613571
Alignment:
Q  44 ttctaaacccttgttt-cagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatag 113  Q
    |||||||||||||||| ||||||||||||||||||  || ||||  |||||||||||||||||||||||||    
T  26613503 ttctaaacccttgttttcagccccctctatctctc--aaggtttcatctgatacaaggtctatatttatag 26613571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 40134000 - 40133937
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccc 66  Q
    |||||||||  |||||||||||| | |||||||||||| | |||||||||||||||||||||||    
T  40134000 aagagacaaattctatacaaaccttcgttttgttgttgtcattctaaacccttgtttcagcccc 40133937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 6997395 - 6997336
Alignment:
Q  185 agaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||||||||||||||| ||||||      ||||||||||||||||||||||||    
T  6997395 agaatatttgcatcaaaaatataatattctctttca------atttgcatcaaatcgttcttcata 6997336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 17324119 - 17324011
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||| ||| |  ||||||||||| |||||||| ||||||||||| ||||| |||||    |||||| ||||| ||| |||||| |||    
T  17324119 aagagacaaactctataaaaatc--agttttgttgtggcctttctgaacccttgttttagccctctcta----tctcaaggtttactctaatacaaagtc 17324026  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||| ||||    
T  17324025 tatatttataataaa 17324011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 8349284 - 8349411
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagttt-agtctgatacaaggtctatatttat 111  Q
    ||||||||||||| || |||| |||||| ||| |||||||||||||||||||| |||||    |||||| ||||   ||| ||||||| |||||||||||    
T  8349284 ctctatacaaaccttaattttcttgttgactt-ctaaacccttgtttcagccctctcta----tctcaaggtttgcatctaatacaagatctatatttat 8349378  T
Q  112 agtaaacatataactcataaatttggaacaaat 144  Q
    | ||||  |||  |||||||| |||||||||||    
T  8349379 aataaaattatccctcataaaattggaacaaat 8349411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 6115344 - 6115376
Alignment:
Q  43 tttctaaacccttgtttcagccccctctatctc 75  Q
    |||||||||||||||||||||||||||||||||    
T  6115344 tttctaaacccttgtttcagccccctctatctc 6115376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 13127865 - 13127959
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttata 112  Q
    ||||||| |||||||| |||| |||||| ||| |||||||||||||||| ||||     ||||||| || ||||| || |||||||||| ||||||||||    
T  13127865 ctctatataaaccctacttttcttgttggctt-ctaaacccttgtttcaacccc-----tctctctaaaggtttactccgatacaaggtttatatttata 13127958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 11693580 - 11693623
Alignment:
Q  207 aatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||||| ||||||||||||||||||||| | |||||||    
T  11693580 aatattccctttaaaaatatatttgcatcaaatcttccttcata 11693623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 14352842 - 14352799
Alignment:
Q  207 aatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||||| ||||||||||||||||||||| | |||||||    
T  14352842 aatattccctttaaaaatatatttgcatcaaatcttccttcata 14352799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 159
Target Start/End: Complemental strand, 16561459 - 16561373
Alignment:
Q  72 tctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagata 159  Q
    |||||||||| ||||  ||||||| ||||| ||||||||||| | | |||||||||||||||||| |||  ||| ||| |||||||||    
T  16561459 tctctctcaaggtttcatctgatataaggtttatatttatag-agaaatataactcataaatttgaaacggatatcacgctgaagata 16561373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 14352919 - 14352877
Alignment:
Q  119 atataactcataaatttggaacaaataccacactgaagatacg 161  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||    
T  14352919 atataactcgtaaatttggaacaaatatcacgctgaagatacg 14352877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 30790658 - 30790729
Alignment:
Q  43 tttctaaacccttgttt-cagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    ||||||||| ||||||| |||| |||||||||||    || ||||| |||||||||| ||||||||||||||||||    
T  30790658 tttctaaactcttgttttcagctccctctatctc----aaggtttactctgatacaatgtctatatttatagtaaa 30790729  T

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Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 43104139 - 43104105
Alignment:
Q  83 gtttagtctgatacaaggtctatatttatagtaaa 117  Q
    ||||| |||||||||||||||||||||||||||||    
T  43104139 gtttactctgatacaaggtctatatttatagtaaa 43104105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 13785662 - 13785711
Alignment:
Q  207 aatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||| ||| ||||||||||||||||||||| | ||||||| |||||    
T  13785662 aatattccttttaaaaatatatttgcatcaaatcttccttcatacgatac 13785711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 13125699 - 13125787
Alignment:
Q  20 caaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatag 113  Q
    |||||||||||||  |||||| ||| || |||||||||||||||||||    | ||||||||  |||| ||||||||||||| | |||||||||    
T  13125699 caaaccctagtttccttgttggctt-cttaacccttgtttcagccccc----tttctctcaagttttactctgatacaaggtttctatttatag 13125787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 18466742 - 18466490
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18466742 caaagagacaaactctatccaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaagg 18466643  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||          ||||||| | ||||||||||||||||||||    
T  18466642 tctatatttatagtaaaaatataactcataaatttggaacaaataccacactgaagatac---ttttttttctcctttagtgaaagaatatttgcatcaa 18466546  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18466545 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 18466490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 18469069 - 18468815
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  18469069 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttatcatgatacaagg 18468970  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||          ||||||||| ||||||||||||||||||||    
T  18468969 tctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatac-tttttattttctccttcagtgaaagaatatttgcatcaa 18468871  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18468870 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 18468815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 27912594 - 27912336
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatacaa 98  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  27912594 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagcaccctctatctctctctcaaagtttagcctgatacaa 27912495  T
Q  99 ggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg-nnnnnnnnctctccttcaatgaaagaatatttgcat 197  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||          ||||||||| |||||||||||||||||    
T  27912494 ggtctatatttatagtaaaagtataactcataaatttggaacaaatatcacactgaagatacgtttttttttttctccttcagtgaaagaatatttgcat 27912395  T
Q  198 caaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  27912394 caaaaatataatattccctttcaaaatatatttgcatcaaatcgtttttcatacgatac 27912336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 19 - 256
Target Start/End: Complemental strand, 10586882 - 10586646
Alignment:
Q  19 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaac 118  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  10586882 acaaactctagttttgttgttgccattctaaacccttgtttcagcccc-tctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaa 10586784  T
Q  119 atataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaaatataatattcccttt 218  Q
     ||||||||||||||||||||||||||||||||||||||||||         ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10586783 gtataactcataaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcccttt 10586684  T
Q  219 caaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||| |||||    
T  10586683 caaaatatatttgcatcaaatcgttcttcatacgatac 10586646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 18511435 - 18511679
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  18511435 aagagacaaactctatacaaaccctagttttgttgttgtcattctaaacccttgtttcagccccctctatctc--tcaaagtttagtctgatacaaggtc 18511532  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||         ||||||||| ||||||||||||||||||||||    
T  18511533 tatatttatattaaacatataactcataaatttggaacgaataccacactaaagatacgtttttttt-tctccttcagtgaaagaatatttgcatcaaaa 18511631  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  18511632 atataatatttcctttcaaaatatatttgcatcaaatcgttcttcata 18511679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 27910508 - 27910258
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc--aaagtttagtctgatacaa 98  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||  ||||||||  |||||||||    
T  27910508 caaagagacaaactctatacaaaccctagttttgttgttgcctttttaaacc-ttgtttcagcccccgctatctctctctcaaagtttaacctgatacaa 27910410  T
Q  99 ggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatc 198  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||          ||||||||| ||||||||||||||||||    
T  27910409 ggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatactttttttttttctccttcagtgaaagaatatttgcatc 27910310  T
Q  199 aaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27910309 aaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 27910258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 18509541 - 18509784
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||    
T  18509541 aagagacaaactctatacaaaccctagttttgttgttgtcattctaaacccttgtttcagcccc-tctatctc--tcaaagtttagtctgatacaaggtc 18509637  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||         ||||||||| ||||||||||||||||||||||    
T  18509638 tatatttatagtaaacatataactcataaatttgggatgaataccacactgaagatacgtttttttt-tctccttcagtgaaagaatatttgcatcaaaa 18509736  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  18509737 atataatattccctttcaaaatatatttgcatcaaatcattcttcata 18509784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 15552301 - 15552042
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc------aaagtttagtctgatac 96  Q
    |||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||      ||||||||| |||||||    
T  15552301 aagagataaactctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagtcccctctatctctctctctctcaaagtttagcctgatac 15552202  T
Q  97 aaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgca 196  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||         ||||||||| ||||||||||||||||    
T  15552201 aaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacgctgaagatacgttttttttttctccttcagtgaaagaatatttgca 15552102  T
Q  197 tcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15552101 tcaaaaatgtcatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 15552042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 25804081 - 25803824
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctca-----aagtttagtctgataca 97  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||      || ||||| ||||||||    
T  25804081 aagagacaaactctatacaaaccctagttttgttgttgccattctaaacccttgtttgagccccctctatctctctctctctcaaatttagcctgataca 25803982  T
Q  98 aggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcat 197  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||         ||||||||| |||||||||||||||||    
T  25803981 aggtctatatttatagtaaaagtataactcataaatttggaacaaatattacactgaagatacgtttttttt-tctccttcagtgaaagaatatttgcat 25803883  T
Q  198 caaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25803882 caaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 25803824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 26097791 - 26097544
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||||||||| || |||||||||||||||||||    |||||||| |||||| |||||    
T  26097791 caaagagacaaactctatccaaaccctagttttgttgttgccattctaaacctttatttcagccccctctatctc----aaagtttactctgattcaagg 26097696  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||           |||||||| ||||||||||||||||||||    
T  26097695 tctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacatttttttttcctccttcagtgaaagaatatttgcatcaa 26097596  T
Q  201 aaatataatattccct--ttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||| ||| |||  ||||||||||||||||||||||||||||||||||    
T  26097595 aaatataacatttccttcttcaaaatatatttgcatcaaatcgttcttcata 26097544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 18596703 - 18596464
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||| |||| ||  ||||||||||||||||||||||| |    || ||||| |||||| |||||    
T  18596703 caaagagacaaactctatacaaaccctagttttgttgttgtctttata--cccttgtttcagccccctctatccc----aaggtttactctgattcaagg 18596610  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||         ||||||||| ||| |||||||||| |||||    
T  18596609 tctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgttttttttttctccttcagtgatagaatatttgtatcaa 18596510  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttctt 246  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  18596509 aaatataatattctctttcaaaatatatttgcatcaaatcgttctt 18596464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 26098474 - 26098714
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||| || |||||||| |||||||||||| |||||||||||||||||||     | ||||| |||||| |||||||    
T  26098474 aagagacaaactctatacaaaccctagtcttcttgttgccattctaaacccttatttcagccccctctatctcc----aggtttactctgattcaaggtc 26098569  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg-nnnnnnnnctctccttcaatgaaagaatatttgcatcaaa 201  Q
    |||||||||||||||  ||||||||||||| ||||||| ||||||||| ||||||||||          ||||||||||||||||||| |||| ||||||    
T  26098570 tatatttatagtaaaagtataactcataaaattggaacgaataccacattgaagatacgtttttttatttctccttcaatgaaagaatttttgtatcaaa 26098669  T
Q  202 aatataatattccctttcaaaatatatttgcatcaaatcgttctt 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26098670 aatataatattccctttcaaaatatatttgcatcaaatcgttctt 26098714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 76 - 256
Target Start/End: Original strand, 3373333 - 3373513
Alignment:
Q  76 tctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctcc 175  Q
    |||||||||||  | |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||         |||||    
T  3373333 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttttctcc 3373432  T
Q  176 ttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3373433 ttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 3373513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 40221580 - 40221340
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    |||||| ||||| |||||  ||| |    
T  40221580 caaagagacaaactctatacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctcta----tctcaaggtttactctgagtcaatg 40221485  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatac-------gnnnnnnnnctctccttcaatgaaagaatattt 193  Q
    ||||||||||||||||  |  |||||||||||||| ||||  ||| ||||||||||||||       |         |||||| || |||||||||||||    
T  40221484 tctatatttatagtaa--aagtaactcataaatttagaacggatatcacactgaagatacgttttttgttttttccttctcctgcagtgaaagaatattt 40221387  T
Q  194 gcatcaaaaatataatattccctttcaaaatatatttgcatcaaatc 240  Q
    ||||||||||||||||||||| |||||||||||||||| | ||||||    
T  40221386 gcatcaaaaatataatattccttttcaaaatatatttgaaacaaatc 40221340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1189830 - 1189947
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagttta-gtctgatacaag 99  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||||||||||    
T  1189830 caaagagacaaactctatacaaaccgtagttttgttgttgcctttctaaactcttgtttcagccccctctatctctctcaaggtttacatctgatacaag 1189929  T
Q  100 gtctatatttatagtaaa 117  Q
    ||||||||||||||||||    
T  1189930 gtctatatttatagtaaa 1189947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 4410101 - 4410006
Alignment:
Q  19 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  4410101 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagt 4410006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 21684674 - 21684794
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta------tctctctcaaagtttagtctgatac 96  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||      ||||||||||||||||| |||||||    
T  21684674 aagagacaaactctatacaaaccctagttttgttgttgcctttttaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatac 21684773  T
Q  97 aaggtctatatttatagtaaa 117  Q
    |||||||||||||||||||||    
T  21684774 aaggtctatatttatagtaaa 21684794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 2818557 - 2818669
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    |||||||||||| ||||||||||||    
T  2818557 caaagagacaaactctatacaaaccatagttttgttgttacctttctaaacccttgtttcagccccctcta----tctcaaagtttactctgatacaagg 2818652  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  2818653 tctatatttatagtaaa 2818669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25921694 - 25921806
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    |||||||||||  ||||||||||||    
T  25921694 caaagagacaaactctatacaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaagg 25921789  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  25921790 tctatatttatagtaaa 25921806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 31542791 - 31542681
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||  | ||||||||||||    
T  31542791 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctttgatacaaggtc 31542696  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  31542695 tatatttatagtaaa 31542681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 31545136 - 31545026
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    |||||||||||  | ||||||||||||    
T  31545136 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccccttta----tctcaaagtttgctttgatacaaggtc 31545041  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  31545040 tatatttatagtaaa 31545026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 39854541 - 39854433
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||| |||||||||||  ||||||||||||    
T  39854541 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccc-----tctatctcaaagtttgctctgatacaagg 39854447  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  39854446 tctatatttatagt 39854433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21948084 - 21947973
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||     ||| ||||||| |||| ||||||||||||    
T  21948084 caaagagacaaactctatacaaaccctagttttgttgttgtctttctaaacccttgtttcagcccc-----tctatctcaaaatttactctgatacaagg 21947990  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  21947989 tctatatttatagtaaa 21947973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 38882162 - 38882051
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||| |||| ||||||  ||||||||||||||    
T  38882162 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccc---ctctatctccaagtttgctctgatacaaggtc 38882066  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  38882065 tatatttatagtaaa 38882051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 4236687 - 4236575
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||     ||||||  ||||||||||||    
T  4236687 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaactcttgtttcagccccctttatctcc----aagtttgctctgatacaagg 4236592  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  4236591 tctatatttatagtaaa 4236575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17072941 - 17072829
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    |||||| |||||  ||||||||| |    
T  17072941 caaagagacaaactctatacaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaatg 17072846  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  17072845 tctatatttatagtaaa 17072829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20507683 - 20507795
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||     
T  20507683 caaagagacaaactctatacaaaccttaatttttttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttactctgatacaaga 20507778  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  20507779 tctatatttatagtaaa 20507795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 2174975 - 2174865
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  |||||||||||| |    
T  2174975 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaaggcc 2174880  T
Q  103 tatatttatagtaaa 117  Q
    | |||||||||||||    
T  2174879 tgtatttatagtaaa 2174865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 12556146 - 12556256
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||| ||||||||||||||| | |||||||||||| |||||||||||||||    |||||||||||| ||||||||||||||    
T  12556146 aagagacaaactctatacaaactctagttttgttgttgtcattctaaacccttatttcagccccctcta----tctcaaagtttactctgatacaaggtc 12556241  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  12556242 tatatttatagtaaa 12556256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 31179594 - 31179704
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    |||||||||||  | |||||||| |||    
T  31179594 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagctccctcta----tctcaaagtttgctttgatacaatgtc 31179689  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  31179690 tatatttatagtaaa 31179704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16776216 - 16776103
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    |||||||||||  || |||||||||    
T  16776216 caaagagacaaactctatacaaaccctagttttgttgttgcctttgtaaacccttgtttcagccccctcta----tctcaaagtttgctcagatacaagg 16776121  T
Q  101 tctata-tttatagtaaa 117  Q
    |||||| |||||||||||    
T  16776120 tctatattttatagtaaa 16776103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 34477277 - 34477353
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc 79  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34477277 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc 34477353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 34479642 - 34479718
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc 79  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34479642 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc 34479718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 25904161 - 25904049
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    |||||| |||||  ||||||||| |    
T  25904161 caaagagacaaactctatacaatccctagttttgttgttgtctttctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaatg 25904066  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  25904065 tctatatttatagtaaa 25904049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 6756552 - 6756414
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||    |||||||||||| | |||||||||     
T  6756552 caaagagacaaactctatacaaaccttagttttgttgttgcctttctaaaccattgtttcagctccctcta----tctcaaagtttaatatgatacaaga 6756457  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaat 144  Q
    |||||||| ||||||||  ||||||| | |||||||||| ||||    
T  6756456 tctatattaatagtaaaagtataactta-aaatttggaataaat 6756414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 16092421 - 16092537
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagttta-gtctgatacaag 99  Q
    ||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||  ||||||||||     
T  16092421 caaagagacagactctatacaaaccctaattttgttgttgcctttctaaacccttgtttcaaccccctctatctctcac-aagtttacatctgatacaaa 16092519  T
Q  100 gtctatatttatagtaaa 117  Q
    |||||||||| |||||||    
T  16092520 gtctatatttctagtaaa 16092537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 10529320 - 10529429
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| |||||    |||||||||||  ||||||||||||    
T  10529320 caaagagacaaactctataaaaatcctagttttgttgttgcctttctaaacccttgtttcaacccactcta----tctcaaagtttgctctgatacaagg 10529415  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  10529416 tctatatttatagt 10529429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10474544 - 10474655
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||    || |||||  ||||||||| |    
T  10474544 caaagagacaaactctatacaaaccctagatttgttgttgcctttctaaatccttgtttcagccccctctatttc----aaggtttacactgatacaatg 10474639  T
Q  101 tctatatttatagtaa 116  Q
    ||||||||||||||||    
T  10474640 tctatatttatagtaa 10474655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 20043106 - 20042996
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    || ||||  | |||||||| | |    
T  20043106 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacacttgtttcagccccctctatctc----aaggtttgctatgatacaaagcc 20043011  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  20043010 tatatttatagtaaa 20042996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 31466201 - 31466311
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||| ||| | ||| |||||| ||||||||||||| | ||    |||||||||||||||||||||||||||    
T  31466201 aagagacaaactctatacaaaccctagttttgtcgttacttttttaaacctttgtttcagcccctttta----tctcaaagtttagtctgatacaaggtc 31466296  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  31466297 tatatttatagtaaa 31466311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 31472836 - 31472946
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    || |||||  || |||||| |||    
T  31472836 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctc----aaggtttacactaatacaatgtc 31472931  T
Q  103 tatatttatagtaaa 117  Q
     ||||||||||||||    
T  31472932 catatttatagtaaa 31472946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 34530889 - 34530999
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    |||||| ||||| |||||| ||| |||    
T  34530889 aagagacaaactctatacaaaccctagttttgttgttgcatttctaaacacttgtttcagccccctcta----tctcaaggtttactctgattcaaagtc 34530984  T
Q  103 tatatttatagtaaa 117  Q
    |||||||| ||||||    
T  34530985 tatatttacagtaaa 34530999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 41585946 - 41586083
Alignment:
Q  20 caaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaaca 119  Q
    ||||||||||||||||| |||   ||||||||||||||||||||||||| ||||||    || ||||| ||||||||||   ||||||||||||||||      
T  41585946 caaaccctagttttgttcttgttattctaaacccttgtttcagccccctttatctc----aaggtttactctgatacaaaacctatatttatagtaaaag 41586041  T
Q  120 tataactcataaatttggaacaaataccacactgaagatacg 161  Q
    ||||||||||| ||||||||| ||||||| ||||||||||||    
T  41586042 tataactcatagatttggaacgaataccagactgaagatacg 41586083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 36402549 - 36402661
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||| ||  ||| | ||||||||||||||||||||||||||||    |||||| ||||| ||||||| ||||    
T  36402549 caaagagacaaactctatacaaaccctagtttcgtgattgtcattctaaacccttgtttcagccccctcta----tctcaacgtttactctgatataagg 36402644  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  36402645 tctatatttatagtaaa 36402661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 6747364 - 6747253
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||||||||||  | ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||    |||  ||||||||||||    
T  6747364 caaagagacaaattttatacaaactctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctttc--tctttgctctgatacaagg 6747267  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  6747266 tctatatttatagt 6747253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 39398214 - 39398287
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 75  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39398214 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcag-cccctctatctc 39398287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 20045066 - 20044956
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||    || ||||  |||||||||| | |    
T  20045066 aagagacaaactctatacaaaccctagttttgttgttgctttcctaaacccttgtttcagccccctctgtctc----aaggtttgctctgatacaaagcc 20044971  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  20044970 tatatttatagtaaa 20044956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 24126912 - 24126802
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||    |||| |||||| |||||  |||||| || |||    
T  24126912 aagagacaaactctatacaaaccctagttttgttgttgtctttctaaactcttgtttcagcccc----atctatctcaaggtttacactgatataatgtc 24126817  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  24126816 tatatttatagtaaa 24126802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 6745127 - 6745049
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc 79  Q
    ||||||||||| || |||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  6745127 caaagagacaaactttatacaaaccctagttttgttgttgcttttctaaacacttgtttcagccccctttatctctctc 6745049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 6661411 - 6661555
Alignment:
Q  8 acaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatat 107  Q
    |||| ||||||||| |||||| |||| |||||| ||| |||||||||||||||| ||| |||||||||    || ||||| |||||||||||||||||||    
T  6661411 acaaactctatacataccctaattttcttgttgactt-ctaaacccttgtttcaaccctctctatctc----aaggtttactctgatacaaggtctatat 6661505  T
Q  108 ttatagtaaacatataactcataaatttggaacaaataccacactgaagat 158  Q
    ||||||| || |||||||||||||||||| |||  |||  |||||||||||    
T  6661506 ttatagtgaa-atataactcataaatttgaaacggatataacactgaagat 6661555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 21288713 - 21288653
Alignment:
Q  190 atttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21288713 atttgcatcaaaaatataatattccctttcaaaatatatttgcataaaatcgttcttcata 21288653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 17818711 - 17818817
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||| | |||||||||||| |||||||||||||||||||||||||| ||||||||||||||     ||| |||||| |||||  ||||||||| |    
T  17818711 caaagagacgaactctatacaaactctagttttgttgttgcctttctaaactcttgtttcagcccc-----tctttctcaaggtttacactgatacaatg 17818805  T
Q  101 tctatatttata 112  Q
    ||||||||||||    
T  17818806 tctatatttata 17818817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 37706003 - 37706109
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    |||||||||  |||||||||||||||| ||||| |||||||||||||||| || |||||||||||||||    |||||| |||||  ||||||||| |||    
T  37706003 aagagacaaagtctatacaaaccctagatttgtcgttgcctttctaaacctttatttcagccccctcta----tctcaaggtttacactgatacaatgtc 37706098  T
Q  103 tatatttatag 113  Q
    |||||||||||    
T  37706099 tatatttatag 37706109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 695931 - 695835
Alignment:
Q  17 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    |||||| |||||  || |||||| ||||||||| |||||||    
T  695931 atacaaaccctagttttgttgttgcctttctaaacccttgtttcatcccccttta----tctcaaggtttacactcatacaatgtctatattcatagtaa 695836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 69 - 252
Target Start/End: Complemental strand, 15143482 - 15143303
Alignment:
Q  69 ctatctctctcaaagtttag-tctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg---nnn 164  Q
    ||||||||||||| |||||  ||||||||||||||||||||||||| | | |||||||||||||||||| |||  ||| ||| |||||||||||          
T  15143482 ctatctctctcaaggtttacatctgatacaaggtctatatttatag-agaaatataactcataaatttgtaacggatatcacgctgaagatacgtttctt 15143384  T
Q  165 nnnnnctctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatg 252  Q
         | || ||||| |||||||||||||||||||       |||||||||||||||||||||||||||||||||| | |||||||||    
T  15143383 ttttccccttcttcagtgaaagaatatttgcatca-------aatattccctttcaaaatatatttgcatcaaatcttccttcatatg 15143303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 21288822 - 21288715
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||| |||| |||||||  |||||||||||| ||||| |||||||||    |||||| ||||| ||| || |||||    
T  21288822 caaagagacaaactctatacaaaccctatttttattgttgctattctaaacccttatttcaaccccctcta----tctcaaggtttactctaattcaagg 21288727  T
Q  101 tctatatttata 112  Q
    ||||||||||||    
T  21288726 tctatatttata 21288715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 36208597 - 36208526
Alignment:
Q  43 tttctaaacccttgttt-cagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    ||||||||||||||||| ||||||||||||||||    || ||||| |||||||||||||||||||||||||||||    
T  36208597 tttctaaacccttgttttcagccccctctatctc----aaggtttactctgatacaaggtctatatttatagtaaa 36208526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 2954474 - 2954368
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||||||||||  | || ||||||||||||||||||| || ||||||||||||||||||||  | ||||||    ||||||||||||  ||||||||| |    
T  2954474 caaagagacaaattatacacaaaccctagttttgttgctgtctttctaaacccttgtttcatactcctcta----tctcaaagtttacactgatacaaag 2954379  T
Q  101 tctatatttat 111  Q
     ||||||||||    
T  2954378 cctatatttat 2954368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 2144874 - 2144925
Alignment:
Q  67 ctctatctctctcaaagtttag-tctgatacaaggtctatatttatagtaaa 117  Q
    |||| |||||||||| |||||  |||||||||||||||||||||||||||||    
T  2144874 ctctctctctctcaaggtttacatctgatacaaggtctatatttatagtaaa 2144925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 23665127 - 23665084
Alignment:
Q  74 tctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||||  | |||||||||||||||||||||||||||    
T  23665127 tctctcaaagtttgctttgatacaaggtctatatttatagtaaa 23665084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 23793460 - 23793503
Alignment:
Q  74 tctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||||  | |||||||||||||||||||||||||||    
T  23793460 tctctcaaagtttgctttgatacaaggtctatatttatagtaaa 23793503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 15354769 - 15354815
Alignment:
Q  71 atctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    ||||||| ||||||||  | |||||||||||||||||||||||||||    
T  15354769 atctctcccaaagtttgctttgatacaaggtctatatttatagtaaa 15354815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 15357045 - 15357091
Alignment:
Q  71 atctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    ||||||| ||||||||  | |||||||||||||||||||||||||||    
T  15357045 atctctcccaaagtttgctttgatacaaggtctatatttatagtaaa 15357091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 29748333 - 29748287
Alignment:
Q  72 tctctctcaaagtttag-tctgatacaaggtctatatttatagtaaa 117  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||    
T  29748333 tctctctaaaagtttacatctgatacaaggtctatatttatagtaaa 29748287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 658574 - 658610
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttg 37  Q
    |||| |||||| |||||||||||||||||||||||||    
T  658574 caaatagacaaactctatacaaaccctagttttgttg 658610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 20053889 - 20053834
Alignment:
Q  16 tatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctat 72  Q
    |||| |||| ||||||||  ||||||||| |||||||||||||||||| ||||||||    
T  20053889 tatataaactctagtttttgtgttgcctt-ctaaacccttgtttcagcgccctctat 20053834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 114
Target Start/End: Complemental strand, 23667402 - 23667362
Alignment:
Q  74 tctctcaaagtttagtctgatacaaggtctatatttatagt 114  Q
    |||||||||||||  | ||||||||||||||||||||||||    
T  23667402 tctctcaaagtttgctttgatacaaggtctatatttatagt 23667362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 39798070 - 39798034
Alignment:
Q  81 aagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  39798070 aagtttactctaatacaaggtctatatttatagtaaa 39798034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 6 - 256
Target Start/End: Complemental strand, 15809328 - 15809079
Alignment:
Q  6 agacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctat 105  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  15809328 agacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctttatctctctcaaagtttagcctgatacaaggtctat 15809229  T
Q  106 atttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaaata 205  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||         ||||||||| |||||||||||||||||||||||||    
T  15809228 atttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgtttttttt-tctccttcagtgaaagaatatttgcatcaaaaata 15809130  T
Q  206 taatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15809129 taatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 15809079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 28283440 - 28283696
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc--tctcaaagtttagtctgatacaa 98  Q
    ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  28283440 caaagagtcaaactctatacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaa 28283539  T
Q  99 ggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatc 198  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||         ||||||||| ||||||||||||||||||    
T  28283540 ggtctatatttatagtaaaagtataactcataaatttggaacaaatattacactgaagatacgtttttttt-tctccttcagtgaaagaatatttgcatc 28283638  T
Q  199 aaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  28283639 aaaaatataatattcactttcaaaatatatttgcatcaaatcgttcttcatacgatac 28283696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 3874124 - 3873867
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||  |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |    
T  3874124 caaagagacaaactctatacaaactttagttttgttgttgtctttctaaacccttgtttcagcccccgctatctctctcaaagtttagcctgatacaaag 3874025  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg-nnnnnnnnctctccttcaatgaaagaatatttgcatca 199  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| |          ||||||||| |||||||||||||||||||    
T  3874024 tctatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagatatgtttttttttttctccttcagtgaaagaatatttgcatca 3873925  T
Q  200 aaaatataatattccctttcaaaatatatttgcatcaaatcg-ttcttcatatgatac 256  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||    
T  3873924 aaaatataatattctctttcaaaatatatttgcatcaaatcgtttcttcatacgatac 3873867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 32339423 - 32339263
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32339423 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaagg 32339324  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg 161  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  32339323 tctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacg 32339263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 34 - 250
Target Start/End: Complemental strand, 43530209 - 43529994
Alignment:
Q  34 gttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaat 133  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  ||||||||||||||    
T  43530209 gttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtataactcataaat 43530110  T
Q  134 ttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgca 233  Q
    |||||| ||||||||||||||||||||          ||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  43530109 ttggaataaataccacactgaagatac-ttttttttttctccttcagtgaaagaatattagcataaaaaatataatattccctttcaaaatatatttgca 43530011  T
Q  234 tcaaatcgttcttcata 250  Q
    |||||||||||||||||    
T  43530010 tcaaatcgttcttcata 43529994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 41384856 - 41384616
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||| ||||||||||| | |||||||||||||||||||||||     ||| ||||||  |||| | |||| |||||||    
T  41384856 aagagacaaactctatacaaaccctaattttgttgttgtcattctaaacccttgtttcagcccc-----tctatctcaatttttactttgattcaaggtc 41384762  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||         | ||||||||||||||||||||||||| ||||    
T  41384761 tatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgtttttttt-tttccttcaatgaaagaatatttgcat-aaaa 41384664  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41384663 atataatattccctttcaaaatatatttgcatcaaatcgttcttcata 41384616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 41382785 - 41382542
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    |||||||||  ||||||||||||||| ||||||||||| | |||||||||||||||| |||||| ||||||||    || ||||| |||||| |||||||    
T  41382785 aagagacaaattctatacaaaccctaattttgttgttgtcattctaaacccttgttttagccccatctatctc----aaggtttactctgattcaaggtc 41382690  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||         |||| |||| ||||||||||||||||| ||||    
T  41382689 tatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgttttttttttctcattcagtgaaagaatatttgcataaaaa 41382590  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  41382589 atataatatttcctttcaaaatatatttgcatcaaatcgttgttcata 41382542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 24873404 - 24873564
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc--tctcaaagtttagtctgatacaagg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  24873404 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaagg 24873503  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg 161  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||    
T  24873504 tctatatttatagtaaaagtataactcataaatttggaacaaatacaacactgaagatacg 24873564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 608848 - 608587
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc----tctcaaagtttagtctgatac 96  Q
    ||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    |||||||||||  | |||||     
T  608848 caaagagacaaactctatacaaaccctaattttgttgttgcatttctaaacccttgtttcagccccctctatctctctctctcaaagtttgctatgatat 608749  T
Q  97 aaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg---nnnnnnnnctctccttcaatgaaagaatattt 193  Q
    |||||||||||||| ||| || ||||||||||||||||||||||||||| ||||| |||||||||            ||||||||| |||||||||||||    
T  608748 aaggtctatatttacagtgaa-atataactcataaatttggaacaaatatcacaccgaagatacgttcttttttttttctccttcagtgaaagaatattt 608650  T
Q  194 gcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||||| |||||    
T  608649 gcataaaatatataatattctctttcaaaatatatttgcatcaaatcgtccttcatacgatac 608587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 20 - 222
Target Start/End: Complemental strand, 181632 - 181434
Alignment:
Q  20 caaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaaca 119  Q
    |||||||||||||| |||||||| |||||| |||||||||||||||||||||||||    ||||||||||||||||||| ||||||||||||||||||      
T  181632 caaaccctagttttattgttgccattctaagcccttgtttcagccccctctatctc----aaagtttagtctgatacaaagtctatatttatagtaaaag 181537  T
Q  120 tataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaaatataatattccctttc 219  Q
    ||||||||||||||||||||| ||||||||||||||||||||         ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  181536 tataactcataaatttggaacgaataccacactgaagatacgtttttttcttctcctttagtgaaagaatatttgcatcaaaaatataatattccctttc 181437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15072824 - 15072712
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  15072824 caaagagacaaactctatacaaaccatagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttagtctgatacaagg 15072729  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  15072728 tctatatttatagtaaa 15072712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14807865 - 14807753
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||  ||||||||||||    
T  14807865 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaagg 14807770  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  14807769 tctatatttatagtaaa 14807753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 12517248 - 12517359
Alignment:
Q  4 agagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtct 103  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||| |    
T  12517248 agagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta--tctctcaaagtttgctctgatacaaggtat 12517345  T
Q  104 atatttatagtaaa 117  Q
    |||| |||||||||    
T  12517346 atatatatagtaaa 12517359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 13858707 - 13858842
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    |||||| ||||| |||||||||| |||    
T  13858707 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcatccccctcta----tctcaaggtttactctgatacaaagtc 13858802  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaa 143  Q
    |||||||||||||||  |||  |||||||| ||||||||||    
T  13858803 tatatttatagtaaaagtatccctcataaa-ttggaacaaa 13858842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 14419414 - 14419549
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    |||||| |||||  ||||||||| |||    
T  14419414 aagagacaaactctatacaaaccctagtttttttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaatgtc 14419509  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaa 143  Q
    |||||||||||||||  ||| ||||||||| ||||||||||    
T  14419510 tatatttatagtaaaagtatcactcataaa-ttggaacaaa 14419549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 27827100 - 27826988
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  ||||||||||||    
T  27827100 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaagg 27827005  T
Q  101 tctatatttatagtaaa 117  Q
     ||||||||||||||||    
T  27827004 cctatatttatagtaaa 27826988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 27829411 - 27829299
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  ||||||||||||    
T  27829411 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaagg 27829316  T
Q  101 tctatatttatagtaaa 117  Q
     ||||||||||||||||    
T  27829315 cctatatttatagtaaa 27829299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 33541609 - 33541721
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| |||||  ||||||||| |    
T  33541609 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaatgtttacactgatacaatg 33541704  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  33541705 tctatatttatagtaaa 33541721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 18810820 - 18810710
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  ||||||||||| ||    
T  18810820 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaagatc 18810725  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  18810724 tatatttatagtaaa 18810710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 27107120 - 27107230
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| |||||  ||||||||| |||    
T  27107120 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttatactgatacaatgtc 27107215  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  27107216 tatatttatagtaaa 27107230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15068095 - 15067983
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    |||||||||||||  ||||||||||    
T  15068095 caaagagacaaactctatacaaaccctggttttgttgttgcctttctaaacccttgtttcagccccttcta----tctcaaagtttaggttgatacaagg 15068000  T
Q  101 tctatatttatagtaaa 117  Q
    | |||||||||||||||    
T  15067999 tttatatttatagtaaa 15067983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 28251788 - 28251900
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||    |||||||||||| | ||||||||||    
T  28251788 caaagagacaaactctatacaaaccctagttttgttgttgccattctaaacccttgtttcaacccactcta----tctcaaagtttactatgatacaagg 28251883  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  28251884 tctatatttatagtaaa 28251900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 3886153 - 3886251
Alignment:
Q  15 ctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||  |||||||||| |||||||||||||||    
T  3886153 ctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaaagtctatatttatagt 3886248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 4424126 - 4424020
Alignment:
Q  7 gacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctata 106  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||  ||||||||||||||| ||    
T  4424126 gacaaactctatacaaaccctagttttgttgttgcctttctaaatccttgtttcagccccctcta----tctcaaagtttgctctgatacaaggtctgta 4424031  T
Q  107 tttatagtaaa 117  Q
    |||||||||||    
T  4424030 tttatagtaaa 4424020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 143
Target Start/End: Original strand, 5622964 - 5623096
Alignment:
Q  6 agacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctat 105  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| ||||| ||||||||||   ||||    
T  5622964 agacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttattctgatacaaaacctat 5623059  T
Q  106 atttatagtaaacatataactcataaatttggaacaaa 143  Q
    ||||||||||||   || ||||||||| ||||||||||    
T  5623060 atttatagtaaaagaatcactcataaa-ttggaacaaa 5623096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 22684877 - 22684996
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta------tctctctcaaagtttagtctgat 94  Q
    |||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||      |||||||||||||||  ||||||    
T  22684877 caaaaagacaaactctatacaaaccctagttttgttgttgtctttctaaacccttgtttcagcctcctctatctctctctctctcaaagtttgctctgat 22684976  T
Q  95 acaaggtctatatttatagt 114  Q
    ||||||||||||||||||||    
T  22684977 acaaggtctatatttatagt 22684996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 36865650 - 36865539
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagttta-gtctgatacaaggt 101  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||| || |||||  |||||||||| ||    
T  36865650 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tcttaaggtttacatctgatacaatgt 36865555  T
Q  102 ctatatttatagtaaa 117  Q
    ||||||||||||||||    
T  36865554 ctatatttatagtaaa 36865539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1225280 - 1225168
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    |||||| |||||  ||||||||| |    
T  1225280 caaagagacaaactctttacaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaatg 1225185  T
Q  101 tctatatttatagtaaa 117  Q
     ||||||||||||||||    
T  1225184 cctatatttatagtaaa 1225168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 26775315 - 26775203
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    || ||||  |||||||||| |    
T  26775315 caaagagacaaactatatacaaaccctagtattgttgttgcctttctaaacccttgtttcagccccctctatctc----aaggtttgctctgatacaaag 26775220  T
Q  101 tctatatttatagtaaa 117  Q
     ||||||||||||||||    
T  26775219 cctatatttatagtaaa 26775203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 14477388 - 14477278
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    || ||||  |||||||||| | |    
T  14477388 aagagacaaactttatacaaaccctagttttgttgttgcctttctaaacccttgtttcaaccccctctatctc----aaggtttgctctgatacaaagcc 14477293  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  14477292 tatatttatagtaaa 14477278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 44720955 - 44720845
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||  ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    |||||||||||  | ||||| ||||||    
T  44720955 aagagacagactctatacaaaacatagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctttgatataaggtc 44720860  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  44720859 tatatttatagtaaa 44720845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 43082085 - 43082009
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc 79  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43082085 aagagacaaactctatacaaaccttagttttgttgttgcttttctaaacccttgtttcagccccctctatctctctc 43082009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 27911126 - 27911055
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 75  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27911126 aagagacaaactctatacaaaccctagttttgttgttgcc-ttctaaacccttgtttcagccccctctatctc 27911055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 27957545 - 27957474
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 75  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27957545 aagagacaaactctatacaaaccctagttttgttgttgcc-ttctaaacccttgtttcagccccctctatctc 27957474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 43079714 - 43079639
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc 79  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  43079714 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccc-ctatctctctc 43079639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 30480724 - 30480836
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||| |||| ||||||||    || |||||  || |||||| |    
T  30480724 caaagagacaaactctatacaaactttagttttgttgttgcctttctaaacccttgtttcaaccccttctatctc----aaggtttacactaatacaatg 30480819  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  30480820 tctatatttatagtaaa 30480836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 18812989 - 18812895
Alignment:
Q  19 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||     ||||||  ||||||||||| |||||||||||||||||    
T  18812989 acaaactctagttttgttgttgcctttctaaacccttgtttcagcctcctctatctcc----aagtttgctctgatacaagatctatatttatagtaaa 18812895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 35872606 - 35872711
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||     |||||||||||||||||||||||||||||||||||    |||||| |||||  ||||||||| |||    
T  35872606 aagagacaaactctatacaaaccctagtt-----gttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaatgtc 35872696  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  35872697 tatatttatagtaaa 35872711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 5372401 - 5372510
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||     ||| ||||||  ||||  ||||||||| |||    
T  5372401 aagagacaaactctatataaaccctaattttgttgttgcctttctaaacccttgtttcagcccc-----tctatctcaagatttacactgatacaatgtc 5372495  T
Q  103 tatatttatagtaaa 117  Q
    |||| ||||||||||    
T  5372496 tataattatagtaaa 5372510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 25952632 - 25952523
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| || ||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||    || ||||  |||||||||| |      
T  25952632 aagagacaaactatatacaa-ccctaattttattgttgcctttctaaacccttgtttcagccccctctatctc----aaggtttcctctgatacaaagct 25952538  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  25952537 tatatttatagtaaa 25952523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 15185933 - 15186070
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| || |||| ||||| |||||||||| ||  ||||||||||||||||||||| | ||| ||    |||||| ||||| |||||||||| ||     
T  15185933 aagagacaaactttatataaaccatagttttgttattttctttctaaacccttgtttcagtcaccttta----tctcaaggtttactctgatacaaagtt 15186028  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaat 144  Q
    |||||||||||||||  |||  |||||||| |||||||||||    
T  15186029 tatatttatagtaaaagtatccctcataaaattggaacaaat 15186070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 37214458 - 37214505
Alignment:
Q  28 agttttgttgttgcctttctaaacccttgtttcagccccctctatctc 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37214458 agttttgttgttgcctttctaaacccttgtttcagccccctctatctc 37214505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 2468361 - 2468431
Alignment:
Q  43 tttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||| |||||||||||| |||||||||||    |||||||| | |||||||||||||||||||||||||||    
T  2468361 tttctaaatccttgtttcagctccctctatctc----aaagtttactttgatacaaggtctatatttatagtaaa 2468431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 21482394 - 21482324
Alignment:
Q  43 tttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||||||||||| || |||||||||    |||||||| ||||||||||  |||||||||||||||||    
T  21482394 tttctaaacccttgtttcagtccactctatctc----aaagtttactctgatacaaattctatatttatagtaaa 21482324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 31035171 - 31035064
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgttt-cagccccctctatctctctcaaagtttag-tctgatacaaggtctatattta 110  Q
    ||||||||||||||||||||| |||||| ||| ||||||| |||||| ||| |   ||| |  |||||||||||||  ||||||||||||||||||||||    
T  31035171 ctctatacaaaccctagttttcttgttgactt-ctaaaccattgttttcagac---tctctacctctcaaagtttacatctgatacaaggtctatattta 31035076  T
Q  111 tagtaaacatat 122  Q
    ||||||| ||||    
T  31035075 tagtaaaaatat 31035064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 32339252 - 32339211
Alignment:
Q  215 ctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  32339252 ctttcaaaatatatttgcatcaaatcgttcttcatacgatac 32339211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 31162256 - 31162188
Alignment:
Q  76 tctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaat 144  Q
    |||||| ||||| | |||||||||||||||||||||||||||  |||  |||||||| |||||||||||    
T  31162256 tctcaaggtttactatgatacaaggtctatatttatagtaaaagtatccctcataaaattggaacaaat 31162188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 6376032 - 6375991
Alignment:
Q  76 tctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||| ||||| |||||||||||||||||||||||||||||    
T  6376032 tctcaatgtttactctgatacaaggtctatatttatagtaaa 6375991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 17847558 - 17847504
Alignment:
Q  89 tctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaat 144  Q
    |||||||||||||||||||||||||||||  |||  |||| |||||||||||||||    
T  17847558 tctgatacaaggtctatatttatagtaaaagtatccctca-aaatttggaacaaat 17847504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 21480586 - 21480554
Alignment:
Q  43 tttctaaacccttgtttcagccccctctatctc 75  Q
    |||||||||||||||||||||||| ||||||||    
T  21480586 tttctaaacccttgtttcagccccatctatctc 21480554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 24348330 - 24348081
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  24348330 caaagagacaaactctatacaaaccttagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcttgatacaagg 24348231  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||          ||||||||| ||||||||||||||||||||    
T  24348230 tctatatttatagtaaaagtataactcataaatttggaacaaataccacattgaagatactttttttttttctccttcagtgaaagaatatttgcatcaa 24348131  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24348130 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 24348081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 22132613 - 22132870
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccc-----ctctatctctctcaaagtttagtctgataca 97  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||     |||| ||||||||||||||||| ||||||||    
T  22132613 aagagacaaactctatacaaacccaagttttgttgttgcctttctaaacccttgtttcagcccctctatctctctctctctcaaagtttagcctgataca 22132712  T
Q  98 aggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcat 197  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||         ||||||||| |||||||||||||||||    
T  22132713 aggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgtttttttt-tctccttcagtgaaagaatatttgcat 22132811  T
Q  198 caaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22132812 caaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 22132870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 17662473 - 17662700
Alignment:
Q  19 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaac 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||     
T  17662473 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaa 17662572  T
Q  119 atataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaaatataatattcccttt 218  Q
     |||||||||||||||||||||||||||||||||||||||||          ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17662573 gtataactcataaatttggaacaaataccacactgaagatac-ttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcccttt 17662671  T
Q  219 caaaatatatttgcatcaaatcgttcttc 247  Q
    |||||||||||||||||||||||||||||    
T  17662672 caaaatatatttgcatcaaatcgttcttc 17662700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 14787652 - 14787894
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  14787652 caaaaagacaaactctatacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctc--tcaaagtttagtatgatacaagg 14787749  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||         ||||||||| ||||||||||||||||||||    
T  14787750 tctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgtttttttt-tctccttcagtgaaagaatatttgcatcaa 14787848  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttctt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14787849 aaatataatattccctttcaaaatatatttgcatcaaatcgttctt 14787894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 2 - 245
Target Start/End: Complemental strand, 53405241 - 53404998
Alignment:
Q  2 aaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggt 101  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  53405241 aaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccc-tctatctctctcaaagtttagcctgatacaaggt 53405143  T
Q  102 ctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg-nnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||          ||||||| | ||||||||||||||||||||    
T  53405142 ctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaaaatacgtttttttttttctcctttagtgaaagaatatttgcatcaa 53405043  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttct 245  Q
    ||||||||| || ||||||||||||||||||||||||||||||||    
T  53405042 aaatataatttttcctttcaaaatatatttgcatcaaatcgttct 53404998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 22134838 - 22135102
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccc-----------ctctatctctctcaaagtttagtct 91  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||| |||||||||||||||||  |    
T  22134838 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccctctatctctctctctctctctctcaaagtttagctt 22134937  T
Q  92 gatacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatat 191  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||         ||||||||| |||||||||||    
T  22134938 gatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatat 22135037  T
Q  192 ttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22135038 ttgaatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 22135102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 44600061 - 44600311
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    |||||||  | | ||||||||||    
T  44600061 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctc----aaagtttgctttaatacaaggtc 44600156  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnct-ctccttcaatgaaagaatatttgcatcaaa 201  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||||||||| ||         | |||||||| |||||||||||||||||||||    
T  44600157 tatatttatagtaaaagtataactcataaatttgaaacaaataccacactgaagattcgttttttttttcctccttcagtgaaagaatatttgcatcaaa 44600256  T
Q  202 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  44600257 aatataatattcccttttaaaatatatttgcatcaaatcgttcttcatacgatac 44600311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 3 - 197
Target Start/End: Original strand, 47210963 - 47211159
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc--tctcaaagtttagtctgatacaagg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  47210963 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccctctcaaagtttagcctgatacaagg 47211062  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcat 197  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||         ||||||||| |||||||||||||||||    
T  47211063 tctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcat 47211159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 5101109 - 5100866
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||| ||||| |||||||||||||||||||||||||||| | ||||||||| ||||||||| ||||||||    |||||| |||||  ||||| |||||    
T  5101109 caaagtgacaaactctatacaaaccctagttttgttgttgtcattctaaacctttgtttcagtcccctcta----tctcaaggtttaccctgattcaagg 5101014  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||||| | ||||||||||         ||||||||| ||||||||||||||||||||    
T  5101013 tctatatttatagtaaaagtataactcataaatttggaacgaataccagattgaagatacgttttttt--tctccttcagtgaaagaatatttgcatcaa 5100916  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5100915 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 5100866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 56030554 - 56030312
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||| ||||||||    || ||||| |||||||||| | |    
T  56030554 aagagacaaactctatacaaactctagttttgttgttgtcattctaaacccttgtttcagccccttctatctc----aaggtttactctgatacaaagcc 56030459  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    ||||||||||||||| |||||||||||||||||||||  |||||||||| ||||||||          ||||||||| |||||||||||||||| |||||    
T  56030458 tatatttatagtaaaaatataactcataaatttggaaagaataccacaccgaagatac-ttttttttttctccttcagtgaaagaatatttgcaccaaaa 56030360  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  56030359 atataatattccctttcaaaatatatttgcatcaaatcgttcttcata 56030312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 18709386 - 18709548
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc----tctcaaagtttagtctgatacaa 98  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||| || ||||||    
T  18709386 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctaatacaa 18709485  T
Q  99 ggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg 161  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  18709486 ggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacg 18709548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 242
Target Start/End: Complemental strand, 19322796 - 19322571
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttata 112  Q
    ||||||||||||||||||||| |||||| ||| |||||||||||||||| |||||||||||||    || ||||| ||||||||||| ||||||||||||    
T  19322796 ctctatacaaaccctagttttcttgttgactt-ctaaacccttgtttcatccccctctatctc----aaggtttactctgatacaagatctatatttata 19322702  T
Q  113 gtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnct--ctccttcaatgaaagaatatttgcatcaaaaatataata 210  Q
    |   | |||||||||||||||||||||  |||| |||| |||||||||          |  |||||||| ||||||||||||||||||||||||||||||    
T  19322701 gatga-atataactcataaatttggaatgaatatcacattgaagatacatttcttttttttctccttcagtgaaagaatatttgcatcaaaaatataata 19322603  T
Q  211 ttccctttcaaaatatatttgcatcaaatcgt 242  Q
    ||||||||||||||||||||||||||||||||    
T  19322602 ttccctttcaaaatatatttgcatcaaatcgt 19322571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 5637686 - 5637802
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  5637686 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaactcttgtttcagccccctctatctctctcaaagtttgctcttatacaagg 5637785  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  5637786 tctatatttatagtaaa 5637802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 37089593 - 37089707
Alignment:
Q  2 aaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggt 101  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  37089593 aaagagacaaactctatacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctctctc-aagtttagcctgatacaaggt 37089691  T
Q  102 ctatatttatagtaaa 117  Q
    ||||||||||||||||    
T  37089692 ctatatttatagtaaa 37089707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 8631642 - 8631753
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| |||    
T  8631642 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaagtc 8631741  T
Q  103 tatatttatagt 114  Q
    ||||||||||||    
T  8631742 tatatttatagt 8631753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 11006460 - 11006574
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |   |||||||||||||||||    
T  11006460 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaaatagtctgatacaaggtc 11006559  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  11006560 tatatttatagtaaa 11006574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22802955 - 22803067
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    |||||||||||| ||||||||||||    
T  22802955 caaagagacaaactctatacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctcta----tctcaaagtttactctgatacaagg 22803050  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  22803051 tctatatttatagtaaa 22803067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 47274838 - 47274727
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  47274838 caaagagacaaact-tatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttagtctgatacaagg 47274744  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  47274743 tctatatttatagtaaa 47274727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 11008789 - 11008903
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |   ||| |||||||||||||    
T  11008789 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaaatagcctgatacaaggtc 11008888  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  11008889 tatatttatagtaaa 11008903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 38409315 - 38409199
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatct--ctctcaaagtttagtctgatacaagg 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||  ||||||||||||  ||||||||||||    
T  38409315 aagagacaaactctatacaaaccctagttttgttgttgcctttttaaaccattgtttcagccccctctatctccctctcaaagtttgctctgatacaagg 38409216  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  38409215 tctatatttatagtaaa 38409199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 5198532 - 5198420
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||  ||||||||||||    
T  5198532 caaagagacaaactctatacaaatcctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaagg 5198437  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  5198436 tctatatttatagtaaa 5198420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24888908 - 24888796
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||  ||||||||||||    
T  24888908 caaagagacaaactctatacaatccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctct----aagtttgctctgatacaagg 24888813  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  24888812 tctatatttatagtaaa 24888796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 48486431 - 48486319
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    |||||||||||| ||||||||||||    
T  48486431 caaagagataaactctatacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctcta----tctcaaagtttactctgatacaagg 48486336  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  48486335 tctatatttatagtaaa 48486319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 13544071 - 13543937
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagttta-gtctgatacaag 99  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  13544071 caaagagacaaactctatacaaaccctagttttgttgttgtcattctagatccttgtttcagccccctctatctctctcaaagtttacatctgatacaag 13543972  T
Q  100 gtctatatttatagtaaacatataactcataaatt 134  Q
     ||||||||||||||||| | ||  ||||||||||    
T  13543971 atctatatttatagtaaaaacatccctcataaatt 13543937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9148365 - 9148251
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||  ||||||||||||    
T  9148365 caaagagacaaactctatacaaatcctagttttgttgttgcctttctaaacccttgcttcagccccctctatc--tctcaaagtttgctctgatacaagg 9148268  T
Q  101 tctatatttatagtaaa 117  Q
     ||||||||||||||||    
T  9148267 cctatatttatagtaaa 9148251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 11435065 - 11434955
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  ||||||||||||||    
T  11435065 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaaggtc 11434970  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  11434969 tatatttatagtaaa 11434955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 36919806 - 36919920
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| |||||||||| ||||||||||||    
T  36919806 caaagagacaaactttatccaaaccctagttttgttgttgcctttctaaacccttgtttcagcccc--ctatatctatcaaagtttactctgatacaagg 36919903  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  36919904 tctatatttatagtaaa 36919920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 40637186 - 40637077
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  ||||||||||||    
T  40637186 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaagg 40637091  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  40637090 tctatatttatagt 40637077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 6764950 - 6764842
Alignment:
Q  2 aaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggt 101  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    |||||||||||  |||||||||||||    
T  6764950 aaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccttcta----tctcaaagtttgctctgatacaaggt 6764855  T
Q  102 ctatatttatagt 114  Q
    |||||||||||||    
T  6764854 ctatatttatagt 6764842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 7941431 - 7941319
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||  |||||||||| |||    
T  7941431 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctcccg--gtttgctctgatacaacgtc 7941334  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  7941333 tatatttatagtaaa 7941319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22801083 - 22801195
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||    |||||||||||| ||||||||||||    
T  22801083 caaagagacaaactctatacaaactctagttttgttgttgtcattctaaacccttgtttcagccccctcta----tctcaaagtttactctgatacaagg 22801178  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  22801179 tctatatttatagtaaa 22801195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 91 - 250
Target Start/End: Complemental strand, 30136596 - 30136438
Alignment:
Q  91 tgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaata 190  Q
    |||||| |||| |||||||||||  || |||||||| |||||||| |||| |||| |||||||||||||||         ||||||||||||||||||||    
T  30136596 tgatactaggtatatatttatagagaa-atataactaataaatttagaacgaatatcacactgaagatacgttttttttttctccttcaatgaaagaata 30136498  T
Q  191 tttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  30136497 tttgaatcaaaaatataatattctcttttaaaatatatttgcatcaaatcgttcttcata 30136438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3824791 - 3824906
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaag-tttagtctgatacaag 99  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||   || |||||||||||    
T  3824791 caaagagacaaactctatacaaaccctagttttgttgttgcttttctaaacc--tgtttcagccccctctatctctctcaaagaaatactctgatacaag 3824888  T
Q  100 gtctatatttatagtaaa 117  Q
    ||||||||||||||||||    
T  3824889 gtctatatttatagtaaa 3824906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 52942667 - 52942806
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctg--atacaa 98  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||| |||||||||||||||||  ||||||    
T  52942667 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccc-----tctatctcaaagtttagtctgatatacaa 52942761  T
Q  99 ggtctatatttatagtaaacatataactcataaatttggaacaaat 144  Q
    |||||||||||||||| ||  ||| ||| | |||||||||||||||    
T  52942762 ggtctatatttatagtgaaagtattactta-aaatttggaacaaat 52942806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 619670 - 619780
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||    |||||||||||| ||||||||||||||    
T  619670 aagagacaaactctatgcaaaccctagttttgttgttgtctttataaacccttgtttcagccccctcta----tctcaaagtttactctgatacaaggtc 619765  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  619766 tatatttatagtaaa 619780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 18847263 - 18847153
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    |||||||||||  | ||||||||||||    
T  18847263 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcaaccccctcta----tctcaaagtttgttttgatacaaggtc 18847168  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  18847167 tatatttatagtaaa 18847153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 22044613 - 22044723
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  |||||||||||| |    
T  22044613 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaaggcc 22044708  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  22044709 tatatttatagtaaa 22044723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 36378402 - 36378292
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    |||||| ||||| |||||||||| |||    
T  36378402 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccgtcta----tctcaaggtttattctgatacaaagtc 36378307  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  36378306 tatatttatagtaaa 36378292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 36921715 - 36921828
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||  |||||||||||||| ||||||||||||    
T  36921715 caaagagacaaactatatacaaaccctagttttgttgttgcctttctaagcccttgtttca-ccccctcta--tctctcaaagtttactctgatacaagg 36921811  T
Q  101 tctatatttatagtaaa 117  Q
    ||||||||||| |||||    
T  36921812 tctatatttattgtaaa 36921828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24879101 - 24878989
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    |||| ||||||| || |||||||||    
T  24879101 caaagagacaaactctatacaaaccctagttttgttgttgtctttctaaaccctagtttcagccccctcta----tctccaagtttactcggatacaagg 24879006  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  24879005 tctatatttatagtaaa 24878989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 40091636 - 40091748
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||    |||||||||||| | ||||||||||    
T  40091636 caaagagacaaactctaaacaatccctagttttgttgttgtctttctaaacccttgtttcagccccctcta----tctcaaagtttactttgatacaagg 40091731  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  40091732 tctatatttatagtaaa 40091748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 2485095 - 2485203
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   |||  ||||||||||  ||||||||||||||    
T  2485095 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgttttagccccct---tctagctcaaagtttgctctgatacaaggtc 2485191  T
Q  103 tatatttatagt 114  Q
    ||||||||||||    
T  2485192 tatatttatagt 2485203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 9174369 - 9174479
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     ||||||  | ||||||||||||    
T  9174369 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctcc----aagtttgctttgatacaaggtc 9174464  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  9174465 tatatttatagtaaa 9174479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 16934366 - 16934476
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    |||||||||||  | ||||||||||||    
T  16934366 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccttgtatcagccccctcta----tctcaaagtttgctttgatacaaggtc 16934461  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  16934462 tatatttatagtaaa 16934476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 51015356 - 51015246
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  |||||||||| |||    
T  51015356 aagagacaaacactatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaaagtc 51015261  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  51015260 tatatttatagtaaa 51015246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24880563 - 24880451
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||    |||| ||||||| || |||||||||    
T  24880563 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaaccctagtttacgccccctcta----tctccaagtttactccgatacaagg 24880468  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  24880467 tctatatttatagtaaa 24880451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 33415710 - 33415845
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    |||||| ||||| |||||||||| | |    
T  33415710 aagagacaaactctatacaaaccctagttttgttgttacctttctaaacccttgtttcagccccctcta----tctcaaggtttactctgatacaaagcc 33415805  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaa 143  Q
    ||||||| ||||||| | ||  |||||||| ||||||||||    
T  33415806 tatatttgtagtaaaaaaatccctcataaa-ttggaacaaa 33415845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 38928399 - 38928511
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    |||||| ||||| ||| |||||| |    
T  38928399 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaactcttgtttcagccccctcta----tctcaaggtttactctaatacaaag 38928494  T
Q  101 tctatatttatagtaaa 117  Q
     ||||||||||||||||    
T  38928495 cctatatttatagtaaa 38928511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 22046911 - 22047018
Alignment:
Q  6 agacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctat 105  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  || ||||||||| ||||    
T  22046911 agacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctccgatacaaggcctat 22047006  T
Q  106 atttatagtaaa 117  Q
    ||||||||||||    
T  22047007 atttatagtaaa 22047018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2891429 - 2891356
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatct 74  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2891429 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatct 2891356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 9176697 - 9176807
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     ||||||  | ||||||||||||    
T  9176697 aagagacaaactttatacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctcc----aagtttgctttgatacaaggtc 9176792  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  9176793 tatatttatagtaaa 9176807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 14633431 - 14633323
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||      ||| |||||||||||| ||||||||||||    
T  14633431 caaagagacaaactctatacaaactctagttttgttgttgcctttctaaacctttgtttcagccc-----ttctatctcaaagtttactctgatacaagg 14633337  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  14633336 tctatatttatagt 14633323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 31849822 - 31849894
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 75  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31849822 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 31849894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 47868509 - 47868404
Alignment:
Q  5 gagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtcta 104  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||     ||||||  ||||||||||||||||    
T  47868509 gagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttctttcagccctctctatctcc----aagtttgctctgatacaaggtcta 47868414  T
Q  105 tatttatagt 114  Q
    ||||||||||    
T  47868413 tatttatagt 47868404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 19095994 - 19095882
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    |||||| |||||  ||||||||| |    
T  19095994 caaagagacaaactctatacaaaccctaattttgttgttgtcattctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaatg 19095899  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  19095898 tctatatttatagtaaa 19095882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 16932012 - 16932122
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    |||||||||||  | |||||||||||     
T  16932012 aagagacagactctatacaaaccctagttttgttgttgcttttctaaacccttgtatcagccccctcta----tctcaaagtttgctttgatacaaggtt 16932107  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  16932108 tatatttatagtaaa 16932122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 22780596 - 22780714
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaa----agtttagtctgatacaa 98  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||      || ||||  ||||||||    
T  22780596 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccctgtttcagccccctctatctctctctctcttagattagcttgatacaa 22780695  T
Q  99 ggtctatatttatagtaaa 117  Q
    ||| |||||||||||||||    
T  22780696 ggtttatatttatagtaaa 22780714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 22782961 - 22783079
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaa----agtttagtctgatacaa 98  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||      || ||||  ||||||||    
T  22782961 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccctgtttcagccccctctatctctctctctcttagattagcttgatacaa 22783060  T
Q  99 ggtctatatttatagtaaa 117  Q
    ||| |||||||||||||||    
T  22783061 ggtttatatttatagtaaa 22783079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 38270212 - 38270319
Alignment:
Q  6 agacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctat 105  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||    |||||| |||||  ||||||||| ||||||    
T  38270212 agacaaactctacacaaaccctagttttgttgttgcctttctaaacccttgtttcagcctcttcta----tctcaaggtttacactgatacaatgtctat 38270307  T
Q  106 atttatagtaaa 117  Q
    ||||||||||||    
T  38270308 atttatagtaaa 38270319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 37313289 - 37313399
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    |||||| ||||| | ||||||||   |    
T  37313289 aagagacaaactctatgcaaaccctaattttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttactttgatacaaaacc 37313384  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  37313385 tatatttatagtaaa 37313399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 12396069 - 12396178
Alignment:
Q  4 agagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtct 103  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    || |||||   | |||||| ||||    
T  12396069 agagacaaactctatacaaaccctagttttgttgttgcctttctaaatccttgtttcagccccatctatctc----aaggtttacatttatacaatgtct 12396164  T
Q  104 atatttatagtaaa 117  Q
    ||||||||||||||    
T  12396165 atatttatagtaaa 12396178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 12401031 - 12401140
Alignment:
Q  4 agagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtct 103  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    || |||||   | |||||| ||||    
T  12401031 agagacaaactctatacaaaccctagttttgttgttgcctttctaaatccttgtttcagccccatctatctc----aaggtttacatttatacaatgtct 12401126  T
Q  104 atatttatagtaaa 117  Q
    ||||||||||||||    
T  12401127 atatttatagtaaa 12401140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 38890516 - 38890596
Alignment:
Q  171 tctccttcaatgaaagaatatttgcatcaaaaatataatatt-ccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  38890516 tctcctttagtgaaagaatatttgcatcaaaaatataatatttccctttcaaaatatatttgcatcaaatcgtccttcata 38890596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 41997602 - 41997494
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||| |||||||||||||| ||||||| ||| |||||||||||||||| ||    |||||| ||||| |||||||||| |||    
T  41997602 aagagacaaactctatacaaactctagttttgttgtttcctttctgaacacttgtttcagcccccttta----tctcaaggtttactctgatacaaagtc 41997507  T
Q  103 tatatttatagta 115  Q
    |||||||||||||    
T  41997506 tatatttatagta 41997494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 3937432 - 3937541
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    |||| |||| |||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||    |||||| ||||| ||||||| || |||    
T  3937432 aagaaacaaactctatacaaactctagtttttttgttgcctttctaaacccttgtttcagctccctcta----tctcaaggtttactctgata-aaagtc 3937526  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  3937527 tatatttatagtaaa 3937541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 24446807 - 24446912
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||     |||||||||||||||||||||||||||||||||||    |||||| |||||  ||||||||| |||    
T  24446807 aagagacaaactctatacaaaccctagtt-----gttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaatgtc 24446897  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  24446898 tatatttatagtaaa 24446912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16453421 - 16453345
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctc 77  Q
    ||||||||||| || | ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16453421 caaagagacaaactttgtacaaactctagttttgttgttgcctttttaaacccttgtttcagccccctctatctctc 16453345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 15032770 - 15032896
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttata 112  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||    || ||||| |||| ||| | |||||||||||||    
T  15032770 ctctatacaaaccctagttttcttgttgactt-ctaaacccttgtttcagccccctttatctc----aaggtttactctggtaccaagtctatatttata 15032864  T
Q  113 gtaaacatataactcataaatttggaacaaat 144  Q
    |||||  |||  |||||||| |||||||||||    
T  15032865 gtaaaagtatccctcataaaattggaacaaat 15032896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 18409574 - 18409679
Alignment:
Q  7 gacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctata 106  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     || ||| |||||  |||||  |||||||||  ||||||    
T  18409574 gacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagc-----ctctctatctcattgtttacactgatacaaattctata 18409668  T
Q  107 tttatagtaaa 117  Q
    |||||||||||    
T  18409669 tttatagtaaa 18409679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 6132979 - 6132873
Alignment:
Q  6 agacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctat 105  Q
    |||||| |||||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||||||||    || |||||  | ||||||| ||||||    
T  6132979 agacaaactctatacaagccctagttttgttgttgcctttctgaacccttgtt-cagcctcctctatctc----aatgtttacaccgatacaatgtctat 6132885  T
Q  106 atttatagtaaa 117  Q
    ||||||||||||    
T  6132884 atttatagtaaa 6132873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 143
Target Start/End: Original strand, 18537705 - 18537829
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgttt-cagccccctctatctctctcaaagtttagtctgatacaaggtctatatttat 111  Q
    |||||||||||||||||||| ||||||   ||||||||||||||||| ||||||||||||||||    || ||||| ||||||||||| |||||||||||    
T  18537705 ctctatacaaaccctagttt-gttgtttg-tttctaaacccttgttttcagccccctctatctc----aatgtttactctgatacaagatctatatttat 18537798  T
Q  112 agtaaacatataactcataaatttggaacaaa 143  Q
    ||||||   || ||||||||| ||||||||||    
T  18537799 agtaaaagcatcactcataaa-ttggaacaaa 18537829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 8756483 - 8756583
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgttt-cagccccctctatctctctcaaagtttagtctgatacaaggtctatatttat 111  Q
    ||||||||||| |||| |||| |||||| ||| |||||||||||||| ||||||| ||||||||    || ||||| |||||||||||||||||||||||    
T  8756483 ctctatacaaatcctaattttcttgttgactt-ctaaacccttgttttcagccccttctatctc----aaggtttactctgatacaaggtctatatttat 8756577  T
Q  112 agtaaa 117  Q
    ||||||    
T  8756578 agtaaa 8756583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 144
Target Start/End: Complemental strand, 25357713 - 25357610
Alignment:
Q  43 tttctaaacccttgttt-cagcccc-ctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaac 140  Q
    ||||||||||||||||| ||||||| |||  |||||||||| ||||| | |||||||||||||||||||||||||||  |||  ||| |||| |||||||    
T  25357713 tttctaaacccttgttttcagcccctctcactctctctcaaggtttactttgatacaaggtctatatttatagtaaaagtatccctcgtaaaattggaac 25357614  T
Q  141 aaat 144  Q
    ||||    
T  25357613 aaat 25357610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 144
Target Start/End: Original strand, 16186099 - 16186197
Alignment:
Q  43 tttctaaacccttgtttc-agccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaaca 141  Q
    |||||||||||||||||  ||||||||||    ||||||| ||||| ||||||||||||| |||||||||||||||  |||  ||| |||| ||||||||    
T  16186099 tttctaaacccttgtttttagccccctct----ctctcaaggtttactctgatacaaggtttatatttatagtaaaagtatccctcctaaaattggaaca 16186194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 9022225 - 9022182
Alignment:
Q  207 aatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  9022225 aatattcccttttaaaatatatttgcatcaaatctttcttcata 9022182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 26086197 - 26086236
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttg 40  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  26086197 caaagagacaaactctatacaaaccctagttttgttgttg 26086236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 28453715 - 28453660
Alignment:
Q  89 tctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaat 144  Q
    ||||||||||||||||||||||||||||| ||||  |||| | | |||||||||||    
T  28453715 tctgatacaaggtctatatttatagtaaaaatatccctcaaataattggaacaaat 28453660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 52043712 - 52043763
Alignment:
Q  67 ctctatctctctcaaagtttag-tctgatacaaggtctatatttatagtaaa 117  Q
    |||| |||||||||| |||||  |||||||||||||||||||||||||||||    
T  52043712 ctctctctctctcaaggtttacatctgatacaaggtctatatttatagtaaa 52043763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 22295203 - 22295153
Alignment:
Q  67 ctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||||||  |||  ||||||||||||| |||||||||||||||    
T  22295203 ctctatctctctcaagatttcatctgatacaaggtttatatttatagtaaa 22295153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 36380459 - 36380425
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttg 37  Q
    ||||||||| |||||||||||||||||||||||||    
T  36380459 aagagacaaactctatacaaaccctagttttgttg 36380425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 12102162 - 12102090
Alignment:
Q  43 tttctaaacccttgttt-cagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    ||||||||||||||||| ||||||||    ||| |||||| ||||  ||||||||||| |||||||||||||||||    
T  12102162 tttctaaacccttgttttcagcccccc---tctatctcaaggttttatctgatacaagatctatatttatagtaaa 12102090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 77
Target Start/End: Complemental strand, 16455356 - 16455323
Alignment:
Q  44 ttctaaacccttgtttcagccccctctatctctc 77  Q
    ||||||||||||||||||||||||| ||||||||    
T  16455356 ttctaaacccttgtttcagccccctttatctctc 16455323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 256
Target Start/End: Original strand, 47211158 - 47211191
Alignment:
Q  223 atatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||| |||||    
T  47211158 atatatttgcatcaaatcgttcttcatacgatac 47211191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 10112899 - 10112847
Alignment:
Q  89 tctgatacaaggtctatatttatagtaaaca-tataactcataaatttggaac 140  Q
    |||||||||| |||||||||||||  ||| | |||||||||||||||||||||    
T  10112899 tctgatacaatgtctatatttataaaaaaaaatataactcataaatttggaac 10112847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 23452458 - 23452712
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  23452458 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctgtctctctcaaagtttagcctgatacaagg 23452557  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||          ||||||||| ||||||||||||||||||||    
T  23452558 tctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaaggtac-ttttttttttctccttcagtgaaagaatatttgcatcaa 23452656  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  23452657 aaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatac 23452712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 35215809 - 35216067
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc------tctcaaagtttagtctgatac 96  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||      ||||||||||||| |||||||    
T  35215809 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatac 35215908  T
Q  97 aaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgca 196  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||| |          ||||||||| ||||||||||| ||||    
T  35215909 aaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagattc-atttttttttctccttcagtgaaagaatatctgca 35216007  T
Q  197 tcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  35216008 tcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttctttatacgatac 35216067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 4 - 256
Target Start/End: Complemental strand, 42452814 - 42452566
Alignment:
Q  4 agagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtct 103  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  |||||||||| ||||    
T  42452814 agagacaaactttatacaaactctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaatgtct 42452719  T
Q  104 atatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaaa 203  Q
    ||||||||| ||||  |||||||||||||||||||||||||||||||| ||||||||          ||||||||| |||||||||||||||||||||||    
T  42452718 atatttataataaaagtataactcataaatttggaacaaataccacaccgaagatacattttttttttctccttcagtgaaagaatatttgcatcaaaaa 42452619  T
Q  204 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42452618 tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 42452566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 35218186 - 35218448
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc----------aaagtttagtctg 92  Q
    ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||          ||||||||| ||     
T  35218186 aagagacaaactctatataaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctctctctctctctcaaagtttagcctt 35218285  T
Q  93 atacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatt 192  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| ||         ||||||||| ||||||||||||    
T  35218286 atacaaggtctatatttatagtaaaagtataactcataaatttggagcaaataccacactgaagattcgtttttttt-tctccttcagtgaaagaatatt 35218384  T
Q  193 tgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  35218385 tgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttctttatacgatac 35218448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 42923732 - 42923971
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||  |||||||| ||||| | |||| |||||||    
T  42923732 aagagacaaactctatacaaatcctagttttgttgttgccattctaaacccttgtttcagcctcctcta--tctctcaaggtttactatgattcaaggtc 42923829  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    |||||||||||||||  ||||||||||||||||||||| || ||    ||||||||||          ||||||||| ||||||||||||||||||||||    
T  42923830 tatatttatagtaaaagtataactcataaatttggaacgaacac----ctgaagatac--ttatttgttctccttcagtgaaagaatatttgcatcaaaa 42923923  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||    
T  42923924 atataatatttcttttcaaaatatatttgcatcaaatcgttcttcata 42923971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 40032279 - 40032391
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||| ||||||||||||    
T  40032279 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttactctgatacaagg 40032374  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  40032375 tctatatttatagtaaa 40032391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 5377650 - 5377763
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||| ||||||    
T  5377650 caaagagacaaactctatacaaaccttagttttgttgttgcctttctaaacccttgtttcagtcccctctatctctctcaaagtttgctctgaaacaagg 5377749  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  5377750 tctatatttatagt 5377763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 21520914 - 21521028
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  21520914 caaagagacaaactctatacaagccctagttttgttgttgcctttctaaacccttgtttcagccccatcta--tctctcaaagtttagtctgatacaagg 21521011  T
Q  101 tctatatttatagtaaa 117  Q
    | |||||||||||||||    
T  21521012 tttatatttatagtaaa 21521028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 24162435 - 24162545
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||  ||||||||||||||    
T  24162435 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaaggtc 24162530  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  24162531 tatatttatagtaaa 24162545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 13910267 - 13910377
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  ||||||||||||||    
T  13910267 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaaggtc 13910362  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  13910363 tatatttatagtaaa 13910377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 19504568 - 19504678
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||  ||||||||||||||    
T  19504568 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaaggtc 19504663  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  19504664 tatatttatagtaaa 19504678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 27104831 - 27104721
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    |||||||||||  ||||||||||||||    
T  27104831 aagagacaaactctatacaaaccctagttttgttgttgcctttctgaacccttgtttcagccccctcta----tctcaaagttttctctgatacaaggtc 27104736  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  27104735 tatatttatagtaaa 27104721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22407630 - 22407742
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    ||||| |||||| ||||||||||||    
T  22407630 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagcaccctata----tctcacagtttactctgatacaagg 22407725  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  22407726 tctatatttatagtaaa 22407742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 6264370 - 6264504
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||    ||||||||||||||||||||| ||||||||||||||||||||||    |||||||||||||||||||||    
T  6264370 caaagagacaaactctatacaaaccct----ttgttgttgcctttctaaacctttgtttcagccccctctatctc----aaagtttagtctgatacaagg 6264461  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaat 144  Q
    ||||||||||||||||| ||||  || | |||||||||||||||    
T  6264462 tctatatttatagtaaaaatatcgctta-aaatttggaacaaat 6264504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 42064547 - 42064437
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||     ||||||  ||||||||||||||    
T  42064547 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagctccctctatctcc----aagtttgctctgatacaaggtc 42064452  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  42064451 tatatttatagtaaa 42064437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22287557 - 22287669
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    |||||||||||| | | ||||||||    
T  22287557 caaagagacagactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctata----tctcaaagtttactttaatacaagg 22287652  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  22287653 tctatatttatagtaaa 22287669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 22163169 - 22163280
Alignment:
Q  2 aaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggt 101  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    ||||||||||||  ||||||||| ||    
T  22163169 aaagagacaaactctatacaaaccctagtgttgttgttgcctttctaaatccttgtttcagccccctcta----tctcaaagtttacactgatacaatgt 22163264  T
Q  102 ctatatttatagtaaa 117  Q
    ||||||||||||||||    
T  22163265 ctatatttatagtaaa 22163280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 31732988 - 31733098
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    |||||| ||||| |||| ||||| |||    
T  31732988 aagagacaaactctatacaaactctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaatgtttactctgttacaaagtc 31733083  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  31733084 tatatttatagtaaa 31733098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 6259036 - 6259148
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||| || ||||||    |||||||||||||||| ||||||||    
T  6259036 caaatagacaaactctatacaaaccctagttttattgttgcctttctaaactcttgtttcatcctcctcta----tctcaaagtttagtctaatacaagg 6259131  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  6259132 tctatatttatagtaaa 6259148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 43623793 - 43623901
Alignment:
Q  5 gagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtcta 104  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |    |||||| ||||||||||||||||    
T  43623793 gagacaaactctatacaaaccctagttttgttgttgcctttctaaaccattgtttcacccccctctatctccc----agtttactctgatacaaggtcta 43623888  T
Q  105 tatttatagtaaa 117  Q
    | |||||||||||    
T  43623889 tttttatagtaaa 43623901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 19502234 - 19502344
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||     ||||||  ||||||||||||||    
T  19502234 aagagacaaactctacacaaaccctagttttgttgttgcctttctaaactcttgtttcagccccctttatctcc----aagtttgctctgatacaaggtc 19502329  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  19502330 tatatttatagtaaa 19502344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 28196669 - 28196559
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    |||||| ||||| |||||||||| |      
T  28196669 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacctttgtttcagccccctcta----tctcaatgtttactctgatacaaagca 28196574  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  28196573 tatatttatagtaaa 28196559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 45280205 - 45280315
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgc-ctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaag 99  Q
    ||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    |||||||||||  |||||||||||    
T  45280205 caaagagacaaactctatacaaaccctagttttgttgttgctttttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaag 45280300  T
Q  100 gtctatatttatagt 114  Q
    || ||||||||||||    
T  45280301 gtatatatttatagt 45280315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 19007674 - 19007562
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    |||||| ||||| | |||||||| |    
T  19007674 caaagagacaaactctatacaaaccataattttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttactatgatacaaag 19007579  T
Q  101 tctatatttatagtaaa 117  Q
     ||||||||||||||||    
T  19007578 cctatatttatagtaaa 19007562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 38020234 - 38020161
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctct 76  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38020234 aagagacaaactctacacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctct 38020161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 3022195 - 3022086
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||| ||| ||    |||||| ||||| |||||||||| |||    
T  3022195 aagagacaaactctatacaaactctagttttgttgttgcctttataaacccttgtttcagcctcctata----tctcaaggtttactctgatacaaagtc 3022100  T
Q  103 tatatttatagtaa 116  Q
    ||||||||||||||    
T  3022099 tatatttatagtaa 3022086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 45239210 - 45239314
Alignment:
Q  14 tctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagttta-gtctgatacaaggtctatatttata 112  Q
    ||||||||||||||||||||||| ||| ||||||||| | |||||||||||||||||||||||||||| |||||  ||||||  | ||||||||||||||    
T  45239210 tctatacaaaccctagttttgtttttgtctttctaaatcattgtttcagccccctctatctctctcaaggtttacatctgatgaatggtctatatttata 45239309  T
Q  113 gtaaa 117  Q
    |||||    
T  45239310 gtaaa 45239314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11739781 - 11739893
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||| |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||    || |||||  || |||||| |    
T  11739781 caaagagacaaactccatacaaaccctaattttgttgttgtctttctaaacccttgttccagccccctctatctc----aaggtttacactaatacaatg 11739876  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  11739877 tctatatttatagtaaa 11739893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 17848477 - 17848403
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 75  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  17848477 caaagagacaaactctatacaaaccctagttttgttgttgtctttctaaaccctcgtttgagccccctctatctc 17848403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 15539698 - 15539808
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||| ||||||||||| | |||||||||||||||||| |||||| ||    |||||| |||||  ||||||||| |||    
T  15539698 aagagacaaactctatacaaaccctaattttgttgttgtcattctaaacccttgtttcaaccccctata----tctcaaggtttacactgatacaatgtc 15539793  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  15539794 tatatttatagtaaa 15539808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17849151 - 17849039
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||| ||| |||||||| ||| ||||||||||||||  ||||||||||||||||||||||||||||||    |||||| |||||  ||||||||| |    
T  17849151 caaagaggcaaactctatacgaactctagttttgttgttatctttctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaatg 17849056  T
Q  101 tctatatttatagtaaa 117  Q
    | |||||||||||||||    
T  17849055 tttatatttatagtaaa 17849039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 34979800 - 34979874
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 75  Q
    ||||||||||| || |||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  34979800 caaagagacaaactttatacaaaccctagtttttttgttacctttctaaacgcttgtttcagccccctctatctc 34979874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14837307 - 14837195
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| || | ||||||||||||||||||||||| |||| | ||||||||||||||| |||||||    |||||| |||||  ||||||||| |    
T  14837307 caaagagacaaactatgtacaaaccctagttttgttgttgtcttttttaacccttgtttcagctccctcta----tctcaaggtttacactgatacaatg 14837212  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||| ||||||    
T  14837211 tctatatttacagtaaa 14837195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 252
Target Start/End: Original strand, 27583631 - 27583786
Alignment:
Q  89 tctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaa 188  Q
    ||||||||||| |||||||||||||  || ||||||||||||||||||||||  ||| ||| ||||||||||          ||||||||| ||||||||    
T  27583631 tctgatacaagatctatatttatagagaa-atataactcataaatttggaacggatatcacgctgaagatacatttcttttttctccttcagtgaaagaa 27583729  T
Q  189 tatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatg 252  Q
    |||||||||||       |||||||| ||||||||||||||||||||||||  | |||||||||    
T  27583730 tatttgcatca-------aatattccttttcaaaatatatttgcatcaaatattccttcatatg 27583786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 38020157 - 38020065
Alignment:
Q  21 aaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||    |||| | |||||  | ||||||| ||||||||||||||||||    
T  38020157 aaaccctagttttgttgttgcctttctaaacccttgttccaaccccctcta----tctccaggtttacaccgatacaatgtctatatttatagtaaa 38020065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 11578339 - 11578437
Alignment:
Q  14 tctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatag 113  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||||||||    ||  ||||  |||||| |||||||||||||||||    
T  11578339 tctatacaaaccctagtttttttgttgactt-ctaaacccttgtttcagcccactctatctc----aagatttaccctgatataaggtctatatttatag 11578433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 144
Target Start/End: Original strand, 37963190 - 37963287
Alignment:
Q  43 tttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaa 142  Q
    |||||||||||||||||||||||||||||    |||||| ||||| ||| |||||| ||||||||||||||||||  |||   ||||||| |||||||||    
T  37963190 tttctaaacccttgtttcagccccctcta----tctcaaggtttactcttatacaaagtctatatttatagtaaaagtatccatcataaaattggaacaa 37963285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 20147038 - 20147108
Alignment:
Q  74 tctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaat 144  Q
    |||||||| ||||| | ||||||||||||||||||||||||||| ||||  |||||||| |||||||||||    
T  20147038 tctctcaaggtttactttgatacaaggtctatatttatagtaaaaatattcctcataaaattggaacaaat 20147108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 44289291 - 44289360
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctat 72  Q
    ||||||||  |||||||||||| ||||||||||||||||||| ||||||| |||||| || |||||||||    
T  44289291 aagagacagactctatacaaactctagttttgttgttgccttcctaaacctttgttttagtcccctctat 44289360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 34575527 - 34575588
Alignment:
Q  171 tctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 239  Q
    ||||||||| |||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  34575527 tctccttcagtgaaagaatatttgcatcaaa-------tattccctttcaaaatatatttgcatcaaat 34575588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 18800565 - 18800635
Alignment:
Q  43 tttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||||||||||||||||| ||    |||| | |||||  ||||||||||||||||||||||||||||    
T  18800565 tttctaaacccttgtttcagccccctata----tctccatgtttaccctgatacaaggtctatatttatagtaaa 18800635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 40699282 - 40699205
Alignment:
Q  67 ctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaat 144  Q
    |||| |||||||||| ||||| |||||| ||||||||||||||||||||||  |||  |||| ||| |||||||||||    
T  40699282 ctctctctctctcaaggtttactctgatgcaaggtctatatttatagtaaaagtatccctcagaaaattggaacaaat 40699205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 20146839 - 20146955
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttata 112  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||||   |   |||| |  |||| || ||||| | ||||||||||||||||||||||    
T  20146839 ctctatacaaaccctagttttcttgttgac-ttctaaacccttgttt--tcaaactctctacctcttaaggtttactttgatacaaggtctatatttata 20146935  T
Q  113 gtaaacatataactcataaa 132  Q
    ||||| ||||  ||||||||    
T  20146936 gtaaaaatatccctcataaa 20146955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 20589633 - 20589583
Alignment:
Q  67 ctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||| |||||||||| ||||  |||||||||||||||||||||||||||||    
T  20589633 ctctctctctctcaaggtttcatctgatacaaggtctatatttatagtaaa 20589583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 12342673 - 12342743
Alignment:
Q  44 ttctaaaccctt-gtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||| ||||||||||||||||||||    || ||||| |||||||||| || |||||||||||||||    
T  12342673 ttctaaaccctttgtttcagccccctctatctc----aaggtttactctgatacaatgtgtatatttatagtaaa 12342743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 28568584 - 28568617
Alignment:
Q  207 aatattccctttcaaaatatatttgcatcaaatc 240  Q
    ||||||||||||||||||||||||||||||||||    
T  28568584 aatattccctttcaaaatatatttgcatcaaatc 28568617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 22874134 - 22874102
Alignment:
Q  43 tttctaaacccttgtttcagccccctctatctc 75  Q
    |||||||||||||||||||||||||||||||||    
T  22874134 tttctaaacccttgtttcagccccctctatctc 22874102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 38414281 - 38414330
Alignment:
Q  20 caaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 75  Q
    ||||||||||||||||||||||||||||||      ||||||||||||||||||||    
T  38414281 caaaccctagttttgttgttgcctttctaa------gtttcagccccctctatctc 38414330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 17897475 - 17897519
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgtt 58  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  17897475 ctctatacaaaccctagttttattgttgac-ttctaaacccttgtt 17897519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 41304627 - 41304667
Alignment:
Q  18 tacaaaccctagttttgttgttgcctttctaaacccttgttt 59  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  41304627 tacaaaccctagttttgttgttggc-ttctaaacccttgttt 41304667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 117
Target Start/End: Original strand, 17897547 - 17897575
Alignment:
Q  89 tctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||||||||||||||||||||    
T  17897547 tctgatacaaggtctatatttatagtaaa 17897575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 174; Significance: 1e-93; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 30967294 - 30967046
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  30967294 caaagagacaaactctatacaaaccatagttttgttgttgtctttctaaacccttgtttcagccccctctatctctctcaaagtttagcct-atacaagg 30967196  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||         ||||||||| ||||||||||||||||||||    
T  30967195 tctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagattcgttttttttttctccttcagtgaaagaatatttgcatcaa 30967096  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  30967095 aaatataatattcgctttcaaaatatatttgcattaaatcgttcttcata 30967046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 12195738 - 12195987
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||||||||||  | ||||||||||||    
T  12195738 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctcta----tctcaaagtttgctttgatacaaggtc 12195833  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||         ||||||||| ||||||||||||||||||||||    
T  12195834 tatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagattcgttttttttttctccttcagtgaaagaatatttgcatcaaaa 12195933  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12195934 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 12195987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 2629108 - 2629362
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccc-ctctatctctctcaaagtttagtctgatacaaggt 101  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||   |||||||||||    
T  2629108 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccctctatctctctctcaaagtttaacatgatacaaggt 2629207  T
Q  102 ctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaa 201  Q
    ||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||||          |||||||| |||||||||||||||||||||    
T  2629208 ctatatttatagtaaaagtataactaataaatttggaacaaatactacactgaagatacgtttttttttcctccttcagtgaaagaatatttgcatcaaa 2629307  T
Q  202 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2629308 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 2629362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 30034826 - 30035079
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| |||||||||||||    
T  30034826 aagagacaaactctatacaaactctaattttgttgttgcctttctaaacccttgttttagctccctctatctctcttaaagtttagcctgatacaaggtc 30034925  T
Q  103 tatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaa 202  Q
    |||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||         ||||||||| ||||||||||| ||||||||||    
T  30034926 tatatttatagtaaaagtataactcataaatttggaacaaatatcacattgaagatacgtttttattttctccttcagtgaaagaatatctgcatcaaaa 30035025  T
Q  203 atataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  30035026 atataatattccctttcaaaatatatttgcattaaatcgttcttcatacgatac 30035079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 19704792 - 19705048
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctc--tatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||  ||||||||||||    
T  19704792 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctccatctctctctcaaagtttgctctgatacaagg 19704891  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg--nnnnnnnnctctccttcaatgaaagaatatttgcatc 198  Q
    |||||||||||||| || |||||||||||||||||||||| |||| |||||| ||||||||           ||||||||| |||||||||||||||||     
T  19704892 tctatatttatagtgaa-atataactcataaatttggaacgaatatcacacttaagatacgtttcttttttttctccttcagtgaaagaatatttgcata 19704990  T
Q  199 aaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  19704991 aaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatac 19705048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 26932785 - 26933041
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctctctcaaagtttagtctgatacaa 98  Q
    ||||||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||    |||||||||||||||  | ||| ||||    
T  26932785 aagagacaaactctatacaaaccctagttttgttattgcttttctaagcccttgtttcaaccccctctatctctctctctcaaagtttgctatgaaacaa 26932884  T
Q  99 ggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatc 198  Q
    |||||||||||||||| ||  |||||| |||||||||||||||||||||||||||||||| ||         ||||||||| ||||||||||||||||||    
T  26932885 ggtctatatttatagtgaaagtataacccataaatttggaacaaataccacactgaagattcgtttttttt-tctccttcagtgaaagaatatttgcatc 26932983  T
Q  199 aaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26932984 aaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 26933041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 17852634 - 17852389
Alignment:
Q  2 aaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggt 101  Q
    |||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||    |||||| ||||| |||||| ||| ||    
T  17852634 aaagagacaaactctatacaaactctagttttgttgttgtcattctaaacccttgtttcagccccctcta----tctcaaggtttactctgattcaaagt 17852539  T
Q  102 ctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatac--gnnnnnnnnctctccttcaatgaaagaatatttgcatca 199  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||            |||| |||| ||||| |||||||||||||    
T  17852538 ctatatttatagtaaaagtataactcataaatttggaacgaataccacac-gaagatacttttttttttcttctctttcagtgaaataatatttgcatca 17852440  T
Q  200 aaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17852439 aaaatataatattccctttcaaaatatatttgcatcaaatagttcttcata 17852389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 73 - 256
Target Start/End: Complemental strand, 18318051 - 18317868
Alignment:
Q  73 ctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctc 172  Q
    ||||||||||||||  | ||| |||||||||||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||||         ||    
T  18318051 ctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtataactcataaatttggaacgaataccacactgaagatacgttttttttttc 18317952  T
Q  173 tccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||    
T  18317951 tccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcttccttcatacgatac 18317868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 15541361 - 15541499
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  15541361 caaagagacaaactctatacaaaccctagttttgtttttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttagtctgatacaagg 15541456  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaat 144  Q
    |||||||||||||||||  | ||||| | |||||||||||||||    
T  15541457 tctatatttatagtaaaagtgtaactta-aaatttggaacaaat 15541499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 20915579 - 20915691
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  20915579 aagagacaaactctatacaaatcctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaa--tttagcctgatacaaggtc 20915676  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  20915677 tatatttatagtaaa 20915691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 15532902 - 15533040
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||||| |||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  15532902 caaagaaacaaactttatacaaaccctagttttgttgttacctttctaaacccttgtttcagccccctcta----tctcaaagtttagtctgatacaagg 15532997  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaat 144  Q
    |||||||||||||||||  ||||||| | |||||||||||||||    
T  15532998 tctatatttatagtaaaagtataactta-aaatttggaacaaat 15533040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28241542 - 28241651
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||  ||||||||||||    
T  28241542 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctct----aagtttgctctgatacaagg 28241637  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  28241638 tctatatttatagt 28241651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 8995572 - 8995460
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    |||||| |||||||||||     
T  8995572 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctctc----agtttactctgatacaaga 8995477  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  8995476 tctatatttatagtaaa 8995460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9020019 - 9019907
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    |||||| |||||||||||     
T  9020019 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctctc----agtttactctgatacaaga 9019924  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  9019923 tctatatttatagtaaa 9019907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 4816454 - 4816578
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----------tctctctcaaagtttagtctg 92  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||| |||    
T  4816454 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctctctctctcaaagtttagcctg 4816553  T
Q  93 atacaaggtctatatttatagtaaa 117  Q
    |||||||||||||||||||||||||    
T  4816554 atacaaggtctatatttatagtaaa 4816578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 242
Target Start/End: Complemental strand, 17012121 - 17011907
Alignment:
Q  16 tatacaaaccctagttttgttgttgcctttctaaacccttgt-ttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagt 114  Q
    ||||||||||||||||| ||||||  ||| |||||||||| | ||||| ||||||||||||    || ||||| || ||||||||||||||||||||||     
T  17012121 tatacaaaccctagttt-gttgtttactt-ctaaacccttttattcagacccctctatctc----aaggtttactccgatacaaggtctatatttataga 17012028  T
Q  115 aaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaaaatataatattcc 214  Q
     || |||||||||||||||||||||| || | ||| |||||||||||         | |  |||| ||||||||||||||||||||||||||||||||||    
T  17012027 gaa-atataactcataaatttggaacgaacatcactctgaagatacgttt------tttttttcagtgaaagaatatttgcatcaaaaatataatattcc 17011935  T
Q  215 ctttcaaaatatatttgcatcaaatcgt 242  Q
    ||||||||||||||||||||||||||||    
T  17011934 ctttcaaaatatatttgcatcaaatcgt 17011907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 5275726 - 5275811
Alignment:
Q  171 tctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5275726 tctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatac 5275811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 14507398 - 14507508
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    |||||||||||  ||| ||||||||||    
T  14507398 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgttttagccccctcta----tctcaaagtttgctctaatacaaggtc 14507493  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  14507494 tatatttatagtaaa 14507508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 32447539 - 32447649
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| ||||| |||||||||| | |    
T  32447539 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttactctgatacaaagcc 32447634  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  32447635 tatatttatagtaaa 32447649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 14458988 - 14459093
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    |||||||||||  ||||||||||||||    
T  14458988 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttatttcagccccctcta----tctcaaagtttgctctgatacaaggtc 14459083  T
Q  103 tatatttata 112  Q
    ||||||||||    
T  14459084 tatatttata 14459093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1072098 - 1072210
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||    |||||||||||| |||||||||| |    
T  1072098 caaagagacaaactctatacaaacactagttttgttgttgcctttctaaacccttgtttcagctccttcta----tctcaaagtttactctgatacaatg 1072193  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  1072194 tctatatttatagtaaa 1072210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11983250 - 11983362
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||     ||||||  ||||||||||||    
T  11983250 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaagcctttgtttcagccccctctatctcc----aagtttgctctgatacaagg 11983345  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  11983346 tctatatttatagtaaa 11983362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 26065079 - 26064965
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaag-tttagtctgatacaag 99  Q
    ||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||   || | |||||||||    
T  26065079 caaagagacaaactctatacaaactctagttttgttgttgccattctaaacccttgtttcagccccctctatctctctccaagaaatactgtgatacaag 26064980  T
Q  100 gtctatatttatagt 114  Q
    |||||||||||||||    
T  26064979 gtctatatttatagt 26064965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 26085048 - 26084934
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaag-tttagtctgatacaag 99  Q
    ||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||   || | |||||||||    
T  26085048 caaagagacaaactctatacaaactctagttttgttgttgccattctaaacccttgtttcagccccctctatctctctccaagaaatactgtgatacaag 26084949  T
Q  100 gtctatatttatagt 114  Q
    |||||||||||||||    
T  26084948 gtctatatttatagt 26084934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 13057285 - 13057175
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    |||||| |||||  ||||||||| |||    
T  13057285 aagagacaaactctatacaaaccctagttttgttcttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaatgtc 13057190  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  13057189 tatatttatagtaaa 13057175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 15530345 - 15530455
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||| |    |||||| ||||||||||||||    
T  15530345 aagagacaaactctatacaaaccctagttttgttgttgccattctaagcccttgcttcagccccctctatctccc----agtttactctgatacaaggtc 15530440  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  15530441 tatatttatagtaaa 15530455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 1230470 - 1230579
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    |||||||||||  | ||||||||||    
T  1230470 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcaaccctctcta----tctcaaagtttgctatgatacaagg 1230565  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  1230566 tctatatttatagt 1230579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 3390472 - 3390343
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    |||||| |||||  ||||||||| |    
T  3390472 caaagagaaaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccgtcta----tctcaaggtttatactgatacaatg 3390377  T
Q  101 tctatatttatagtaaacatataactcataaatt 134  Q
    |||||||||||||||||  |||  ||||||||||    
T  3390376 tctatatttatagtaaaagtatctctcataaatt 3390343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19227629 - 19227741
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    |||||||||||  |||||||||||     
T  19227629 caaaaagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttgagcccccttta----tctcaaagtttgctctgatacaaga 19227724  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  19227725 tctatatttatagtaaa 19227741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 3632161 - 3632272
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    |||||| |||||  ||||||||| |||    
T  3632161 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcaactccctcta----tctcaaggtttacactgatacaatgtc 3632256  T
Q  103 tatatttatagtaaac 118  Q
    ||||||||||||||||    
T  3632257 tatatttatagtaaac 3632272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 25477365 - 25477255
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| |||||  ||||||||| |||    
T  25477365 aagagacaaactctatataaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaatgtc 25477270  T
Q  103 tatatttatagtaaa 117  Q
    |||||||| ||||||    
T  25477269 tatatttacagtaaa 25477255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 30729049 - 30729161
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||||| | ||||||||||||||||||||||    |||||| ||||| |||||||||||     
T  30729049 caaagagacaaactctatacaaacccaagttttgttgttgtctttcgatacccttgtttcagccccctcta----tctcaaggtttactctgatacaaga 30729144  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  30729145 tctatatttatagtaaa 30729161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 24338671 - 24338781
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    |||| |||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| |||||  ||||||||| |||    
T  24338671 aagacacaaactttatgcaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaatgtc 24338766  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  24338767 tatatttatagtaaa 24338781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 3630087 - 3630197
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    ||||||  ||||   |||||||| |||    
T  3630087 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaaccgatgtttcagccccctcta----tctcaagttttacattgatacaatgtc 3630182  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  3630183 tatatttatagtaaa 3630197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 32280087 - 32279982
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||     ||| |||| ||||||| | ||||||||||||    
T  32280087 aagagacaaactctatacaaaccctagatttgttgttgcctttttaaacccttgtttcagcccc-----tctatctccaagtttactatgatacaaggtc 32279993  T
Q  103 tatatttatag 113  Q
    ||||| |||||    
T  32279992 tatatatatag 32279982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 13039845 - 13039735
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||    |||||| |||||  |||||||||  ||    
T  13039845 aagagacaaactctatacaaacccaagttttgttcttgcctttctaaacccttgtttcagcctcctata----tctcaaggtttacactgatacaatatc 13039750  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  13039749 tatatttatagtaaa 13039735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3233952 - 3234063
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| || |||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||     || |||||  ||||||||||     
T  3233952 caaagagacaaactatatacaaaccttagttttgttgttgtctttctaaatccttgtttcagccccctctatctt----aaggtttacactgatacaag- 3234046  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  3234047 tctatatttatagtaaa 3234063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 12161779 - 12161841
Alignment:
Q  4 agagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccc 66  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12161779 agagacaaactctatacaaaccctagttttgttgttgcatttctaaacccttgtttcagcccc 12161841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 22490733 - 22490658
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttc-taaacccttgtttcagccccctctatctc 75  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  22490733 caaagaggcaaactatatacaaaccctagttttgttgttgcctttcaaaaacccttgtttcagccccctctatctc 22490658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 13870645 - 13870749
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| || |||| ||||||||||||||||||||||||||||||||||| ||||||||||     ||| |||||| ||||  |||||||||| | |    
T  13870645 aagagacaaactttatataaaccctagttttgttgttgcctttctaaacccttatttcagcccc-----tctatctcaaggtttgctctgatacaaagcc 13870739  T
Q  103 tatatttata 112  Q
    ||||||||||    
T  13870740 tatatttata 13870749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 240
Target Start/End: Original strand, 22858238 - 22858403
Alignment:
Q  67 ctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg-nnnn 165  Q
    |||||||||||||| |  ||  ||||||||||||| |||||||||||  || ||||||||||||||||||||||  ||| |||  ||||||||||         
T  22858238 ctctatctctctcacaaattcatctgatacaaggtttatatttatagagaa-atataactcataaatttggaacgtatatcacgttgaagatacgtttct 22858336  T
Q  166 nnnnctctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatc 240  Q
         |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||| ||||    
T  22858337 ttttttctccttcaatgaaagaatatttgcatcaaa--------attccctttcaaaatatatttgcatctaatc 22858403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 143
Target Start/End: Complemental strand, 15346441 - 15346347
Alignment:
Q  44 ttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaa 143  Q
    ||||||||||||| ||||||||||||||    |||||| |||||  ||||||||| ||||||||||||||||||  |||  |||||||| ||||||||||    
T  15346441 ttctaaacccttggttcagccccctcta----tctcaaggtttacactgatacaatgtctatatttatagtaaaagtatccctcataaa-ttggaacaaa 15346347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 10584212 - 10584155
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttc 60  Q
    ||||||||| |||||||||||| |||||||||||||||| ||| |||||| |||||||    
T  10584212 aagagacaaactctatacaaactctagttttgttgttgcttttataaacctttgtttc 10584155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 15719705 - 15719673
Alignment:
Q  43 tttctaaacccttgtttcagccccctctatctc 75  Q
    |||||||||||||||||||||||||||||||||    
T  15719705 tttctaaacccttgtttcagccccctctatctc 15719673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 19696523 - 19696422
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgttt-cagccccctctatctctctcaaagtttagtctgatacaaggtctatatttat 111  Q
    |||||||||||||||| ||| ||||||   ||||||||||||||||| |||||| | ||  ||||||||| ||||  ||  |||||||||||||||||||    
T  19696523 ctctatacaaaccctaattt-gttgtttg-tttctaaacccttgttttcagccctccct--ctctctcaaggtttcatcatatacaaggtctatatttat 19696428  T
Q  112 agtaaa 117  Q
    ||||||    
T  19696427 agtaaa 19696422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 28038012 - 28038066
Alignment:
Q  91 tgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaata 145  Q
    |||||||| ||||||||||||||||||  |||  |||||||| ||||||||||||    
T  28038012 tgatacaatgtctatatttatagtaaaagtatccctcataaaattggaacaaata 28038066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 29754979 - 29755029
Alignment:
Q  67 ctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||| ||||||||| |||||  | |||||||||||||||||||||||||||    
T  29754979 ctctctctctctcagagtttgctttgatacaaggtctatatttatagtaaa 29755029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 26066320 - 26066361
Alignment:
Q  76 tctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||  | |||||||||||||||||||||||||||    
T  26066320 tctcaaagtttgctttgatacaaggtctatatttatagtaaa 26066361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 26068591 - 26068632
Alignment:
Q  76 tctcaaagtttagtctgatacaaggtctatatttatagtaaa 117  Q
    |||||||||||  | |||||||||||||||||||||||||||    
T  26068591 tctcaaagtttgctttgatacaaggtctatatttatagtaaa 26068632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 30445404 - 30445359
Alignment:
Q  207 aatattccctttcaaaatatatttgcatcaaatcgttcttcatatg 252  Q
    |||||||| ||| ||||||||||||||||||||| | |||||||||    
T  30445404 aatattcctttttaaaatatatttgcatcaaatcttccttcatatg 30445359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 171; Significance: 7e-92; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 52078 - 51836
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||    
T  52078 caaaaagacaaactctatacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctctc--aaagtttagtatgatacaagg 51981  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||         ||||||||| ||||||||||||||||||||    
T  51980 tctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgtttttttt-tctccttcagtgaaagaatatttgcatcaa 51882  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttctt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  51881 aaatataatattccctttcaaaatatatttgcatcaaatcgttctt 51836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 183861 - 183969
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||      ||| |||||||||||| ||||||||||||    
T  183861 caaagagacaaactctatacaaactctagttttgttgttgcctttctaaacctttgtttcagccc-----ttctatctcaaagtttactctgatacaagg 183955  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  183956 tctatatttatagt 183969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 79252 - 79006
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    ||  |||| |||||| |||||    
T  79252 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctc----aagttttactctgattcaagg 79157  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnct-ctccttcaatgaaagaatatttgcatca 199  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||          | |||||||| |||||||||||||||||||    
T  79156 tctatatttatagtaaaggtataactcataaatttggaacgaataccacactgaagatacattttttttttcctccttcagtgaaagaatatttgcatca 79057  T
Q  200 aaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  79056 aaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 79006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 2107 - 1852
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatc--tctctcaaagtttagtctgatacaagg 100  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||  | ||| ||||||    
T  2107 aagagacaaactctgtacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctatatctttctctcaaagtttgctatgaaacaagg 2008  T
Q  101 tctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaa 200  Q
    |||||||||||||| ||  ||||||| ||||||||||||| ||||||||||||||||||||         ||||||||| ||||||||||||||||| ||    
T  2007 tctatatttatagtgaaagtataacttataaatttggaacgaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcataaa 1908  T
Q  201 aaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatatgatac 256  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||| |||||    
T  1907 aaatataatattccctttcaaaatatatttgcatcaaatcttccttcatacgatac 1852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 11695 - 11938
Alignment:
Q  2 aaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggt 101  Q
    |||||||||| |||||||||||||||||||||||||||| | ||||||| || |||||||||||||||||||||     | ||||| |||||| ||||||    
T  11695 aaagagacaaactctatacaaaccctagttttgttgttgtcattctaaatccctgtttcagccccctctatctcc----aggtttactctgattcaaggt 11790  T
Q  102 ctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnctctccttcaatgaaagaatatttgcatcaaa 201  Q
    ||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||         ||||||||| |||||||||||||||||||||    
T  11791 ctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgtttttttt-tctccttcagtgaaagaatatttgcatcaaa 11889  T
Q  202 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11890 aatataatattccctttcaaaatatatttgcatcaaatcgttcttcata 11938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 69512 - 69628
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||    
T  69512 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatataagg 69611  T
Q  101 tctatatttatagtaaa 117  Q
    ||||||||||| |||||    
T  69612 tctatatttattgtaaa 69628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 73244 - 73360
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||    
T  73244 caaagagacaaactctatacaaaccctagatttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttcctttgatacacgg 73343  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  73344 tctatatttatagtaaa 73360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 4063 - 3952
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  4063 caaagagacaaact-tatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttagtctgatacaagg 3969  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  3968 tctatatttatagtaaa 3952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 29236 - 29116
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc------tctcaaagtttagtctgatac 96  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||      ||||||||||||| |||||||    
T  29236 aagagacaaactctatacaaaccctagttttgttgttgcctttttaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatac 29137  T
Q  97 aaggtctatatttatagtaaa 117  Q
    |||||||||||||||||||||    
T  29136 aaggtctatatttatagtaaa 29116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 41704 - 41813
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||  ||||||||||||    
T  41704 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctct----aagtttgctctgatacaagg 41799  T
Q  101 tctatatttatagt 114  Q
    ||||||||||||||    
T  41800 tctatatttatagt 41813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 2945 - 2835
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||  ||||||||||| ||    
T  2945 aagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaagttc 2850  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  2849 tatatttatagtaaa 2835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 1053 - 1161
Alignment:
Q  2 aaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggt 101  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    |||||||||||  |||||||||||||    
T  1053 aaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccttcta----tctcaaagtttgctctgatacaaggt 1148  T
Q  102 ctatatttatagt 114  Q
    |||||||||||||    
T  1149 ctatatttatagt 1161  T

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Target: scaffold0472 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 6264 - 6154
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    |||||||||||  | ||||||||||||    
T  6264 aagagacaaactctatacaaaccctagttttattgttgcttttctaaacccttgtttcagccccctcta----tctcaaagtttgctttgatacaaggtc 6169  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  6168 tatatttatagtaaa 6154  T

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Target: scaffold0131 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15086 - 14974
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| || |||| |||||||||||||||||||||||||||||| | ||||||||||||||||||    |||||||||||  ||||||||||||    
T  15086 caaagagacaaactttataaaaaccctagttttgttgttgcctttctaaatcattgtttcagccccctcta----tctcaaagtttgctctgatacaagg 14991  T
Q  101 tctatatttatagtaaa 117  Q
    |||||||||||||||||    
T  14990 tctatatttatagtaaa 14974  T

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Target: scaffold0131; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 14603 - 14707
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||  |||||||||||||  ||| | ||||||    
T  14603 caaagagacaaactctatacaaaccctagttttgttgttgtctttctaaaccattgtttcatccccctcta--tctctcaaagtttgctctaaaacaagg 14700  T
Q  101 tctatat 107  Q
    |||||||    
T  14701 tctatat 14707  T

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Target: scaffold0267 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 106 - 30
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc 79  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  106 aagagacaaactctatacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctctc 30  T

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Target: scaffold0004 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 79926 - 79814
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaagg 100  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    |||||| |||||  |||||||||      
T  79926 caaagagacaaactctatacaaaccctagttttattgttgtctttctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaaaa 79831  T
Q  101 tctatatttatagtaaa 117  Q
     ||||||||||||||||    
T  79830 actatatttatagtaaa 79814  T

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Target: scaffold0468 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 230
Target Start/End: Original strand, 1865 - 2080
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttag-tctgatacaaggtctatatttat 111  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||    | |||||  ||||||||||||||||||||||     
T  1865 ctctatacaaaccctagttttcttgttgactt-ctaaacccttgtttcagccacctctatctct----aggtttacatctgatacaaggtctatatttag 1959  T
Q  112 agtaaacatataactcataaatttggaacaaataccacactgaagatacgnnnnnnnnct-----ctccttcaatgaaagaatatttgcatcaaaaatat 206  Q
    || ||   | |||||| |||||||||||   ||| ||| ||||||||| |         |     |||||||| ||||||||||||||||||||||||||    
T  1960 agaaa---tgtaactcgtaaatttggaatggatatcacgctgaagataggtttccttttttttttctccttcagtgaaagaatatttgcatcaaaaatat 2056  T
Q  207 aatattccctttcaaaatatattt 230  Q
    ||||||| ||||||||||||||||    
T  2057 aatattctctttcaaaatatattt 2080  T

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Target: scaffold0011 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 35706 - 35644
Alignment:
Q  1 caaagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagc 63  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35706 caaagagacaaactctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagc 35644  T

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Target: scaffold0224 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 16052 - 16178
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttata 112  Q
    ||||||||||||||||||||| |||||| ||| |||||||||| ||||| ||||||||||||     || ||||| ||||||||||  ||||||||||||    
T  16052 ctctatacaaaccctagttttcttgttgactt-ctaaacccttatttcaaccccctctatctt----aaggtttactctgatacaaaatctatatttata 16146  T
Q  113 gtaaacatataactcataaatttggaacaaat 144  Q
    |||||  |||  ||||||||||||||||||||    
T  16147 gtaaaagtatccctcataaatttggaacaaat 16178  T

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Target: scaffold0133 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 4810 - 4726
Alignment:
Q  76 tctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactcataaatttggaacaaataccacactgaagatacg 161  Q
    |||||| ||||| |||||||||||||||||||||||||  || |||||||||||||||||| ||| |||| |||||||||||||||    
T  4810 tctcaaggtttactctgatacaaggtctatatttatagagaa-atataactcataaatttgaaacgaatatcacactgaagatacg 4726  T

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Target: scaffold0045 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 85295 - 85186
Alignment:
Q  3 aagagacaatctctatacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtc 102  Q
    ||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||||    | ||||| ||| |||||| ||||| | |||||||| | |    
T  85295 aagagacaaactctatacaaaccctagttttgttgttgtctttttaaatccttgttt----ctcctct-tctatctcaaggtttactttgatacaaagcc 85201  T
Q  103 tatatttatagtaaa 117  Q
    |||||||||||||||    
T  85200 tatatttatagtaaa 85186  T

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Target: scaffold0057 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 16881 - 16980
Alignment:
Q  13 ctctatacaaaccctagttttgttgttgcctttctaaacccttgttt-cagccccctctatctctctcaaagtttagtctgatacaaggtctatatttat 111  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||||| ||||| ||||||||||    || ||||| ||||||||||||| |||||||||    
T  16881 ctctatacaaaccctagttttgt-gttgtctttc-aaacccttgttttcagcctcctctatctc----aaggtttactctgatacaaggtttatatttat 16974  T

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