View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7761_low_4 (Length: 750)

Name: NF7761_low_4
Description: NF7761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7761_low_4
NF7761_low_4
[»] chr4 (58 HSPs)
chr4 (18-733)||(54678452-54679168)
chr4 (134-340)||(26994040-26994246)
chr4 (134-340)||(12751719-12751927)
chr4 (439-680)||(54687625-54687863)
chr4 (478-680)||(26997222-26997422)
chr4 (478-673)||(52311185-52311378)
chr4 (478-680)||(26992025-26992228)
chr4 (134-246)||(2926962-2927074)
chr4 (478-619)||(20275934-20276073)
chr4 (347-474)||(20275772-20275901)
chr4 (347-474)||(26997060-26997189)
chr4 (347-447)||(22748790-22748892)
chr4 (347-444)||(30673853-30673953)
chr4 (347-444)||(12659345-12659444)
chr4 (347-501)||(12746666-12746826)
chr4 (347-444)||(1874146-1874246)
chr4 (347-444)||(23200431-23200531)
chr4 (347-447)||(20192744-20192846)
chr4 (347-447)||(6162154-6162255)
chr4 (349-444)||(13753523-13753619)
chr4 (347-444)||(16325872-16325972)
chr4 (347-444)||(12435500-12435600)
chr4 (347-444)||(29333542-29333642)
chr4 (347-444)||(42411012-42411112)
chr4 (496-673)||(17365715-17365889)
chr4 (347-447)||(53529598-53529700)
chr4 (347-444)||(911000-911100)
chr4 (347-447)||(6407840-6407942)
chr4 (347-447)||(13999901-14000005)
chr4 (18-72)||(17246863-17246917)
chr4 (18-72)||(24628699-24628753)
chr4 (18-72)||(29120621-29120675)
chr4 (18-72)||(56033781-56033835)
chr4 (347-413)||(25691379-25691447)
chr4 (18-72)||(14905127-14905181)
chr4 (94-136)||(19570436-19570478)
chr4 (18-72)||(22676362-22676416)
chr4 (598-680)||(22746678-22746759)
chr4 (18-72)||(23749779-23749833)
chr4 (18-72)||(55379565-55379619)
chr4 (94-135)||(11514456-11514497)
chr4 (354-444)||(12429037-12429128)
chr4 (94-134)||(19611250-19611290)
chr4 (18-70)||(44397464-44397516)
chr4 (347-444)||(4393907-4394006)
chr4 (347-444)||(7739911-7740010)
chr4 (18-72)||(13576950-13577005)
chr4 (94-133)||(14836901-14836940)
chr4 (94-133)||(22190037-22190076)
chr4 (94-133)||(40859899-40859938)
chr4 (94-128)||(3500531-3500565)
chr4 (18-72)||(3792586-3792640)
chr4 (94-128)||(5872800-5872834)
chr4 (94-128)||(13026987-13027021)
chr4 (94-128)||(15134916-15134950)
chr4 (94-128)||(31267589-31267623)
chr4 (94-128)||(33377567-33377601)
chr4 (94-135)||(14115997-14116037)
[»] chr3 (79 HSPs)
chr3 (134-354)||(44125032-44125252)
chr3 (134-354)||(12989877-12990097)
chr3 (347-462)||(39875628-39875744)
chr3 (347-474)||(44122154-44122283)
chr3 (347-447)||(2168803-2168905)
chr3 (347-447)||(9724775-9724878)
chr3 (347-447)||(13980808-13980910)
chr3 (347-447)||(13990737-13990839)
chr3 (134-228)||(20459171-20459265)
chr3 (347-447)||(23344281-23344383)
chr3 (347-447)||(40800790-40800892)
chr3 (347-444)||(2978389-2978489)
chr3 (347-447)||(3110661-3110762)
chr3 (347-444)||(21883329-21883429)
chr3 (347-444)||(49486878-49486978)
chr3 (347-446)||(15636444-15636545)
chr3 (538-682)||(8832496-8832640)
chr3 (347-444)||(15752653-15752753)
chr3 (347-445)||(3170300-3170400)
chr3 (347-472)||(12990833-12990962)
chr3 (347-447)||(17033027-17033129)
chr3 (347-495)||(20458890-20459048)
chr3 (18-72)||(6089985-6090039)
chr3 (18-72)||(14968626-14968680)
chr3 (18-72)||(29952283-29952337)
chr3 (18-72)||(30001437-30001491)
chr3 (18-72)||(38178491-38178545)
chr3 (18-72)||(40799147-40799201)
chr3 (18-72)||(47206920-47206974)
chr3 (18-72)||(52283052-52283106)
chr3 (143-219)||(21880033-21880109)
chr3 (518-609)||(39875817-39875906)
chr3 (562-681)||(44126675-44126795)
chr3 (94-133)||(16076331-16076370)
chr3 (94-133)||(21639203-21639242)
chr3 (258-346)||(21880121-21880205)
chr3 (18-72)||(1241921-1241975)
chr3 (18-72)||(11222053-11222107)
chr3 (18-72)||(11222805-11222859)
chr3 (18-72)||(12727082-12727136)
chr3 (18-72)||(14954667-14954721)
chr3 (94-128)||(19250310-19250344)
chr3 (18-72)||(19885924-19885978)
chr3 (18-72)||(20628308-20628362)
chr3 (391-444)||(21477443-21477497)
chr3 (18-64)||(25399101-25399147)
chr3 (18-72)||(49554356-49554410)
chr3 (18-70)||(53057571-53057623)
chr3 (94-133)||(4433163-4433202)
chr3 (347-447)||(7870273-7870376)
chr3 (94-133)||(14954606-14954645)
chr3 (94-133)||(22150403-22150442)
chr3 (18-65)||(24776358-24776405)
chr3 (347-417)||(25468537-25468605)
chr3 (94-128)||(1241997-1242031)
chr3 (94-128)||(2025297-2025331)
chr3 (94-128)||(2560386-2560420)
chr3 (94-128)||(3237895-3237929)
chr3 (94-132)||(6174494-6174532)
chr3 (94-136)||(9994686-9994728)
chr3 (94-128)||(15663531-15663565)
chr3 (94-128)||(16031704-16031738)
chr3 (94-128)||(17910799-17910833)
chr3 (94-128)||(17960809-17960843)
chr3 (18-72)||(18122494-18122548)
chr3 (94-128)||(19888147-19888181)
chr3 (94-128)||(21735580-21735614)
chr3 (18-72)||(22804867-22804921)
chr3 (94-128)||(28165384-28165418)
chr3 (355-447)||(29225201-29225295)
chr3 (94-136)||(46797316-46797358)
chr3 (18-72)||(52919681-52919735)
chr3 (94-134)||(8875047-8875088)
chr3 (94-135)||(12727158-12727199)
chr3 (18-59)||(19250236-19250277)
chr3 (15-72)||(19889782-19889839)
chr3 (94-135)||(22770776-22770817)
chr3 (95-128)||(27849430-27849463)
chr3 (15-72)||(49643607-49643664)
[»] chr1 (51 HSPs)
chr1 (142-346)||(29531986-29532190)
chr1 (132-354)||(26025431-26025650)
chr1 (478-637)||(40279158-40279315)
chr1 (476-663)||(40274346-40274529)
chr1 (347-474)||(40274560-40274688)
chr1 (236-346)||(247518-247628)
chr1 (347-447)||(11441844-11441945)
chr1 (347-444)||(31093101-31093201)
chr1 (347-444)||(11660083-11660182)
chr1 (347-447)||(27179122-27179224)
chr1 (347-444)||(18535133-18535233)
chr1 (347-447)||(17721622-17721725)
chr1 (347-447)||(29547645-29547748)
chr1 (347-447)||(15716529-15716631)
chr1 (347-447)||(33493089-33493191)
chr1 (347-444)||(37356887-37356987)
chr1 (347-447)||(145541-145644)
chr1 (347-447)||(22576025-22576127)
chr1 (347-444)||(28519179-28519280)
chr1 (347-444)||(38991005-38991104)
chr1 (353-447)||(26028599-26028697)
chr1 (349-447)||(27417602-27417698)
chr1 (347-472)||(27317508-27317634)
chr1 (18-70)||(23037293-23037345)
chr1 (18-66)||(25449357-25449405)
chr1 (18-72)||(1899602-1899656)
chr1 (18-72)||(2266341-2266395)
chr1 (18-72)||(2833911-2833965)
chr1 (18-72)||(14294052-14294106)
chr1 (382-447)||(16168704-16168770)
chr1 (18-72)||(22428108-22428162)
chr1 (94-128)||(46181692-46181726)
chr1 (18-67)||(1577109-1577158)
chr1 (94-135)||(24218562-24218603)
chr1 (94-134)||(19171210-19171250)
chr1 (606-674)||(29530252-29530320)
chr1 (18-72)||(14264198-14264253)
chr1 (94-133)||(17017777-17017816)
chr1 (94-137)||(19037160-19037203)
chr1 (20-71)||(29215056-29215107)
chr1 (94-128)||(7308990-7309024)
chr1 (347-416)||(15552769-15552839)
chr1 (94-128)||(22153025-22153059)
chr1 (94-128)||(23975684-23975718)
chr1 (94-128)||(30892264-30892298)
chr1 (94-128)||(32786784-32786818)
chr1 (400-495)||(32808721-32808821)
chr1 (18-72)||(38281618-38281672)
chr1 (94-128)||(51657288-51657322)
chr1 (94-127)||(17025846-17025879)
chr1 (18-71)||(30892321-30892374)
[»] chr2 (60 HSPs)
chr2 (133-340)||(7388096-7388303)
chr2 (134-354)||(25227325-25227547)
chr2 (134-348)||(19086329-19086541)
chr2 (347-614)||(19912168-19912439)
chr2 (347-447)||(5836229-5836331)
chr2 (161-354)||(14189654-14189846)
chr2 (347-447)||(636187-636289)
chr2 (347-447)||(22430253-22430355)
chr2 (347-447)||(22435847-22435949)
chr2 (347-447)||(7910115-7910217)
chr2 (347-447)||(14898688-14898790)
chr2 (347-447)||(19089368-19089470)
chr2 (347-527)||(34111056-34111242)
chr2 (347-447)||(43776897-43776998)
chr2 (347-447)||(1525547-1525649)
chr2 (347-447)||(7385004-7385109)
chr2 (354-444)||(19437691-19437784)
chr2 (347-444)||(24053442-24053542)
chr2 (347-444)||(25445213-25445312)
chr2 (347-418)||(21289728-21289800)
chr2 (347-447)||(17319667-17319770)
chr2 (18-72)||(39038431-39038485)
chr2 (347-447)||(11311953-11312056)
chr2 (347-447)||(25231888-25231991)
chr2 (18-72)||(24851463-24851517)
chr2 (18-72)||(28712497-28712551)
chr2 (349-444)||(43287547-43287645)
chr2 (18-72)||(45087788-45087842)
chr2 (20-72)||(6574957-6575009)
chr2 (143-219)||(43290869-43290945)
chr2 (258-346)||(43290773-43290857)
chr2 (18-72)||(22455750-22455804)
chr2 (18-72)||(23234208-23234262)
chr2 (18-72)||(24778586-24778640)
chr2 (18-72)||(25188657-25188711)
chr2 (18-72)||(28702015-28702069)
chr2 (23-72)||(20152790-20152839)
chr2 (15-72)||(20569537-20569594)
chr2 (18-70)||(6391923-6391975)
chr2 (94-134)||(22797602-22797642)
chr2 (94-137)||(1041523-1041566)
chr2 (94-133)||(24450318-24450357)
chr2 (94-133)||(28702091-28702130)
chr2 (94-133)||(31328840-31328879)
chr2 (94-133)||(31335561-31335600)
chr2 (94-128)||(6391865-6391899)
chr2 (22-72)||(13964778-13964828)
chr2 (353-447)||(16443480-16443578)
chr2 (94-128)||(16735836-16735870)
chr2 (94-128)||(19539651-19539685)
chr2 (94-128)||(20569616-20569650)
chr2 (18-72)||(22188898-22188952)
chr2 (15-69)||(22257447-22257501)
chr2 (94-128)||(28551787-28551821)
chr2 (94-128)||(28732715-28732749)
chr2 (18-72)||(38780651-38780705)
chr2 (18-72)||(40780564-40780618)
chr2 (94-128)||(45087864-45087898)
chr2 (18-71)||(22801730-22801783)
chr2 (15-72)||(24575287-24575344)
[»] chr7 (73 HSPs)
chr7 (134-348)||(8289246-8289464)
chr7 (134-340)||(42939387-42939595)
chr7 (441-678)||(33190270-33190509)
chr7 (496-673)||(39865464-39865639)
chr7 (454-678)||(26617712-26617935)
chr7 (347-447)||(25498960-25499061)
chr7 (347-447)||(558024-558126)
chr7 (351-583)||(14719368-14719609)
chr7 (347-444)||(8248015-8248115)
chr7 (347-444)||(340447-340547)
chr7 (347-447)||(32148382-32148484)
chr7 (346-474)||(7578426-7578554)
chr7 (347-447)||(16648328-16648430)
chr7 (347-447)||(17622689-17622791)
chr7 (347-444)||(29185430-29185531)
chr7 (347-447)||(42208798-42208900)
chr7 (347-444)||(25830542-25830641)
chr7 (347-447)||(20125172-20125274)
chr7 (18-72)||(2499283-2499337)
chr7 (18-72)||(4493799-4493853)
chr7 (347-447)||(20362554-20362658)
chr7 (143-219)||(343774-343850)
chr7 (20-72)||(35954762-35954814)
chr7 (258-346)||(343678-343762)
chr7 (18-69)||(19328859-19328910)
chr7 (18-72)||(13034702-13034756)
chr7 (18-72)||(13473336-13473390)
chr7 (94-128)||(16033138-16033172)
chr7 (18-72)||(16546186-16546240)
chr7 (18-72)||(16619422-16619476)
chr7 (18-72)||(21284223-21284277)
chr7 (18-72)||(21691679-21691733)
chr7 (382-427)||(23818889-23818935)
chr7 (18-72)||(28623202-28623256)
chr7 (94-135)||(10884095-10884136)
chr7 (18-67)||(13879403-13879452)
chr7 (347-419)||(14997623-14997696)
chr7 (94-135)||(21382353-21382394)
chr7 (18-66)||(4820746-4820794)
chr7 (20-72)||(10884021-10884073)
chr7 (20-72)||(16155591-16155643)
chr7 (94-134)||(33604097-33604137)
chr7 (18-70)||(41843271-41843323)
chr7 (18-72)||(9710683-9710738)
chr7 (25-72)||(16557466-16557513)
chr7 (25-72)||(16608149-16608196)
chr7 (94-133)||(18440583-18440622)
chr7 (347-447)||(34326200-34326304)
chr7 (94-128)||(1559968-1560002)
chr7 (94-128)||(4433465-4433499)
chr7 (94-128)||(4493743-4493777)
chr7 (94-128)||(6045155-6045189)
chr7 (94-128)||(11792069-11792103)
chr7 (18-72)||(11792125-11792179)
chr7 (94-128)||(13259368-13259402)
chr7 (94-128)||(13261600-13261634)
chr7 (18-72)||(14186941-14186995)
chr7 (94-128)||(14746544-14746578)
chr7 (18-72)||(15467170-15467224)
chr7 (94-128)||(16557535-16557569)
chr7 (94-128)||(16608093-16608127)
chr7 (94-128)||(17916932-17916966)
chr7 (94-128)||(21284299-21284333)
chr7 (18-72)||(22580103-22580157)
chr7 (94-132)||(23125156-23125194)
chr7 (94-128)||(24883268-24883302)
chr7 (349-447)||(26456999-26457099)
chr7 (94-128)||(48806808-48806842)
chr7 (94-134)||(11318587-11318628)
chr7 (18-67)||(13138774-13138823)
chr7 (18-70)||(15087809-15087862)
chr7 (15-72)||(16315383-16315440)
chr7 (21-70)||(48237687-48237736)
[»] chr8 (45 HSPs)
chr8 (132-340)||(40876956-40877164)
chr8 (347-444)||(30714369-30714470)
chr8 (347-444)||(30722146-30722247)
chr8 (585-681)||(10739135-10739231)
chr8 (347-444)||(37209616-37209717)
chr8 (347-447)||(10738872-10738976)
chr8 (350-447)||(17909654-17909754)
chr8 (347-444)||(21247581-21247681)
chr8 (347-444)||(27679778-27679878)
chr8 (562-680)||(10734076-10734194)
chr8 (347-447)||(23429437-23429541)
chr8 (18-72)||(17796667-17796721)
chr8 (347-444)||(26196801-26196901)
chr8 (585-680)||(15007176-15007270)
chr8 (562-680)||(17909897-17910016)
chr8 (601-680)||(36911894-36911973)
chr8 (367-447)||(12756314-12756396)
chr8 (18-72)||(16206481-16206535)
chr8 (18-72)||(31445352-31445406)
chr8 (18-72)||(45539331-45539385)
chr8 (18-71)||(9319823-9319876)
chr8 (94-141)||(40213994-40214041)
chr8 (347-447)||(41048764-41048866)
chr8 (18-72)||(30422277-30422331)
chr8 (94-128)||(30422353-30422387)
chr8 (15-72)||(19153274-19153331)
chr8 (18-71)||(23185593-23185646)
chr8 (94-135)||(43773305-43773346)
chr8 (94-134)||(16376251-16376291)
chr8 (94-134)||(18565164-18565204)
chr8 (94-133)||(1210623-1210662)
chr8 (94-133)||(17007499-17007538)
chr8 (94-133)||(17287086-17287125)
chr8 (94-133)||(17541412-17541451)
chr8 (94-133)||(18676846-18676885)
chr8 (94-132)||(6406951-6406989)
chr8 (94-128)||(13431541-13431575)
chr8 (18-72)||(19942486-19942539)
chr8 (18-72)||(20383197-20383251)
chr8 (18-72)||(23264474-23264528)
chr8 (94-128)||(45539407-45539441)
chr8 (347-446)||(16845853-16845954)
chr8 (18-67)||(17442694-17442743)
chr8 (19-68)||(18121980-18122029)
chr8 (94-134)||(26735805-26735846)
[»] chr6 (43 HSPs)
chr6 (143-347)||(21147538-21147742)
chr6 (348-447)||(17270340-17270442)
chr6 (347-444)||(23427387-23427487)
chr6 (351-447)||(25397825-25397921)
chr6 (347-447)||(14855841-14855944)
chr6 (347-444)||(19816727-19816826)
chr6 (384-447)||(19441318-19441382)
chr6 (347-416)||(6932945-6933015)
chr6 (18-72)||(10631392-10631446)
chr6 (18-72)||(13435140-13435194)
chr6 (18-72)||(21624347-21624401)
chr6 (18-71)||(20731546-20731599)
chr6 (592-680)||(23599900-23599988)
chr6 (20-72)||(24717659-24717711)
chr6 (18-69)||(18434768-18434819)
chr6 (18-72)||(9717081-9717135)
chr6 (94-136)||(12352928-12352970)
chr6 (18-72)||(17380818-17380872)
chr6 (18-72)||(21234411-21234465)
chr6 (18-70)||(18377684-18377736)
chr6 (94-133)||(7752043-7752082)
chr6 (94-133)||(17926946-17926985)
chr6 (18-72)||(20113473-20113528)
chr6 (94-133)||(28252368-28252407)
chr6 (94-128)||(12041057-12041091)
chr6 (18-72)||(14101284-14101338)
chr6 (94-128)||(15301417-15301451)
chr6 (18-72)||(15532470-15532524)
chr6 (94-128)||(15551239-15551273)
chr6 (94-128)||(16124338-16124372)
chr6 (94-128)||(19453472-19453506)
chr6 (94-128)||(19833904-19833938)
chr6 (26-72)||(19952434-19952480)
chr6 (18-72)||(22801398-22801452)
chr6 (94-128)||(24471280-24471314)
chr6 (94-128)||(30451903-30451937)
chr6 (18-72)||(32543518-32543572)
chr6 (94-128)||(32756760-32756794)
chr6 (94-128)||(33866502-33866536)
chr6 (15-72)||(13601422-13601479)
chr6 (94-135)||(21034233-21034274)
chr6 (96-133)||(22385962-22385999)
chr6 (15-72)||(25593326-25593383)
[»] chr5 (50 HSPs)
chr5 (134-310)||(18085834-18086010)
chr5 (479-673)||(19779927-19780119)
chr5 (478-638)||(19479453-19479611)
chr5 (351-583)||(17604582-17604823)
chr5 (347-444)||(16675469-16675569)
chr5 (347-444)||(21171341-21171441)
chr5 (347-444)||(35264694-35264794)
chr5 (479-673)||(19783175-19783366)
chr5 (347-447)||(28367133-28367235)
chr5 (439-629)||(16633272-16633463)
chr5 (393-474)||(19780153-19780234)
chr5 (347-447)||(17945653-17945756)
chr5 (347-443)||(24213471-24213570)
chr5 (347-447)||(30957749-30957851)
chr5 (354-444)||(23053533-23053626)
chr5 (351-447)||(19699251-19699351)
chr5 (347-444)||(25365548-25365648)
chr5 (346-447)||(34648082-34648185)
chr5 (382-464)||(19479652-19479734)
chr5 (18-72)||(7746524-7746578)
chr5 (18-72)||(31117130-31117184)
chr5 (18-70)||(23880269-23880321)
chr5 (17-72)||(9399440-9399495)
chr5 (347-447)||(18080103-18080208)
chr5 (18-72)||(6498569-6498623)
chr5 (18-72)||(33021914-33021968)
chr5 (18-71)||(13546355-13546408)
chr5 (94-134)||(19642726-19642766)
chr5 (393-494)||(21575047-21575152)
chr5 (347-418)||(22231014-22231086)
chr5 (94-134)||(37395360-37395400)
chr5 (94-133)||(13533175-13533214)
chr5 (94-133)||(17456620-17456659)
chr5 (94-133)||(21199915-21199954)
chr5 (94-133)||(22185160-22185199)
chr5 (18-69)||(30742197-30742248)
chr5 (94-133)||(31487402-31487441)
chr5 (385-474)||(35104960-35105048)
chr5 (94-133)||(40033685-40033724)
chr5 (94-128)||(3246365-3246399)
chr5 (18-72)||(21076011-21076065)
chr5 (18-72)||(21100578-21100632)
chr5 (94-128)||(21702437-21702471)
chr5 (18-72)||(22000855-22000909)
chr5 (94-128)||(23477575-23477609)
chr5 (94-128)||(27276621-27276655)
chr5 (95-133)||(31144223-31144261)
chr5 (94-128)||(33021849-33021883)
chr5 (94-128)||(42242815-42242849)
chr5 (385-474)||(29948569-29948658)
[»] scaffold0124 (1 HSPs)
scaffold0124 (347-447)||(39348-39449)
[»] scaffold0014 (1 HSPs)
scaffold0014 (347-444)||(111780-111880)
[»] scaffold0004 (2 HSPs)
scaffold0004 (347-447)||(345823-345925)
scaffold0004 (15-72)||(378348-378405)
[»] scaffold0102 (1 HSPs)
scaffold0102 (347-444)||(13930-14030)
[»] scaffold0066 (1 HSPs)
scaffold0066 (347-447)||(11499-11602)
[»] scaffold0081 (1 HSPs)
scaffold0081 (347-418)||(7670-7742)
[»] scaffold0062 (2 HSPs)
scaffold0062 (383-447)||(19754-19818)
scaffold0062 (383-447)||(29922-29986)
[»] scaffold0359 (1 HSPs)
scaffold0359 (18-72)||(6524-6578)
[»] scaffold0023 (1 HSPs)
scaffold0023 (18-72)||(102812-102866)
[»] scaffold0859 (2 HSPs)
scaffold0859 (18-72)||(2226-2280)
scaffold0859 (94-128)||(2170-2204)
[»] scaffold0479 (1 HSPs)
scaffold0479 (18-72)||(9223-9277)
[»] scaffold0210 (1 HSPs)
scaffold0210 (18-72)||(878-932)
[»] scaffold0163 (1 HSPs)
scaffold0163 (18-72)||(25685-25739)
[»] scaffold0036 (1 HSPs)
scaffold0036 (18-72)||(111400-111454)
[»] scaffold0290 (1 HSPs)
scaffold0290 (18-67)||(19454-19503)
[»] scaffold0439 (1 HSPs)
scaffold0439 (18-66)||(7509-7557)
[»] scaffold0028 (1 HSPs)
scaffold0028 (18-66)||(24576-24624)
[»] scaffold0315 (2 HSPs)
scaffold0315 (94-133)||(7865-7904)
scaffold0315 (22-72)||(7926-7976)
[»] scaffold0311 (1 HSPs)
scaffold0311 (94-137)||(19315-19358)
[»] scaffold0161 (2 HSPs)
scaffold0161 (18-72)||(10907-10962)
scaffold0161 (18-72)||(15571-15626)
[»] scaffold0116 (1 HSPs)
scaffold0116 (94-133)||(21811-21850)
[»] scaffold0047 (1 HSPs)
scaffold0047 (94-133)||(33735-33774)
[»] scaffold0038 (1 HSPs)
scaffold0038 (94-133)||(52568-52607)
[»] scaffold0022 (2 HSPs)
scaffold0022 (94-133)||(36625-36664)
scaffold0022 (94-133)||(134685-134724)
[»] scaffold0752 (1 HSPs)
scaffold0752 (94-128)||(618-652)
[»] scaffold0622 (1 HSPs)
scaffold0622 (94-128)||(1867-1901)
[»] scaffold0471 (1 HSPs)
scaffold0471 (94-128)||(2655-2689)
[»] scaffold0391 (1 HSPs)
scaffold0391 (94-128)||(3053-3087)
[»] scaffold0364 (1 HSPs)
scaffold0364 (94-128)||(5374-5408)
[»] scaffold0275 (1 HSPs)
scaffold0275 (94-136)||(23820-23862)
[»] scaffold0267 (1 HSPs)
scaffold0267 (94-128)||(7190-7224)
[»] scaffold0205 (2 HSPs)
scaffold0205 (18-72)||(752-806)
scaffold0205 (94-128)||(828-862)
[»] scaffold0115 (1 HSPs)
scaffold0115 (18-72)||(17588-17642)
[»] scaffold0084 (1 HSPs)
scaffold0084 (94-128)||(31790-31824)
[»] scaffold0068 (1 HSPs)
scaffold0068 (94-128)||(11439-11473)
[»] scaffold0045 (1 HSPs)
scaffold0045 (94-128)||(88475-88509)
[»] scaffold0011 (1 HSPs)
scaffold0011 (94-128)||(250849-250883)
[»] scaffold0007 (1 HSPs)
scaffold0007 (94-128)||(63536-63570)
[»] scaffold0002 (2 HSPs)
scaffold0002 (94-128)||(476167-476201)
scaffold0002 (94-128)||(482687-482721)
[»] scaffold1457 (1 HSPs)
scaffold1457 (391-448)||(1115-1172)
[»] scaffold0026 (1 HSPs)
scaffold0026 (15-72)||(7136-7193)


Alignment Details
Target: chr4 (Bit Score: 509; Significance: 0; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 18 - 733
Target Start/End: Complemental strand, 54679168 - 54678452
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttaggnnnnnnnnnnnnnnnnnnnnncacaattcaacccctcttcttgtg 117  Q
    |||||||||||| |||| ||||||||||||||||||| |||||||||||||||||                     |||||||||||||| |||||||||    
T  54679168 acatcacttcagaagtagaactctatctgcttttgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtg 54679069  T
Q  118 tttttctcaccatcaaaaattagtgtttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattc 217  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  54679068 tttttctcaccatcagaaattagtgtttgatcaatgattttcttgatacgatcatatttctattatatcgattgaaacgtccaatattgtttccttattc 54678969  T
Q  218 tacgatcaaagtttggttatgattttcttctttcttattgcataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacata 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| ||||    
T  54678968 tacgatcaaagtttggttatgattttcttctttcttattgcataagacttcttgaaggcctgagttacaaggtaagcaagcacaaactcttttctccata 54678869  T
Q  318 actcttgaaaacatcttttatgaattgacgtactctttttccttcactagaattttttcccattg-gtttttctttagtaatgttttaatgaggcatatc 416  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  54678868 actcttgaaaacatcttttatgaattgacgtactatttttccttcactagaatttttttccattgagtttttctttagtaaggttttaatgaggcatatc 54678769  T
Q  417 ctcatggacattcaagggggagtgttatgaaataaagacttagtggatatccatccttcttcaccttcctataaccccaattagtaagtgaatagttggt 516  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  54678768 ctcatagacatccaagggggagtgttatgaaataaagacttagtggatgtccatccttcttcaccttcctataacccccgttattaagtgaatagttggt 54678669  T
Q  517 ggaccttaatttccttgatcacacttacttacttatcttgtgtattataaataggactcatattgtattgtaaagatacatttgtgaagagaacaataga 616  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| |    
T  54678668 ggaccttaatttcattgatcacacttacttactcatcttgtgtattataaataggactcatattatattgtaaagatacgtttgtgaagagaataataaa 54678569  T
Q  617 aagtgttttcatcttctccttcctcctgttctttgatcttgtgtttttcctttatttcttaacatacacannnnnnnaggagcaagatatttcaaaatga 716  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||    
T  54678568 aagtgttttcatcttctccttcctcttcttctttgatcttgtgtttttcctttatttcttaacatacacatttttttatgagcaagatatttcaaaatga 54678469  T
Q  717 aaatcatatgcaagtaa 733  Q
    |||||||||||||||||    
T  54678468 aaatcatatgcaagtaa 54678452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 134 - 340
Target Start/End: Original strand, 26994040 - 26994246
Alignment:
Q  134 aaattagtgtttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattctacgatcaaagtttgg 233  Q
    |||||||||||||||||| |||||| ||||||| ||||| |  ||||||||| |||||||| ||||||||||||||| |||||||| |||||||||||||    
T  26994040 aaattagtgtttgatcaaagatttttttgatacgatcatgtccctattatatggattgaaaagtgcaatattgtttcgttattctatgatcaaagtttgg 26994139  T
Q  234 ttatgattttcttctttcttattgcataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaacatct 333  Q
    |||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  26994140 ttatgattttcttctttcttattgcataagacttctagaaggtctgaattacaaggtaagtaaacacaaactcttttctacataattcttgaaaacatct 26994239  T
Q  334 tttatga 340  Q
    | |||||    
T  26994240 tatatga 26994246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 134 - 340
Target Start/End: Complemental strand, 12751927 - 12751719
Alignment:
Q  134 aaattagtgtttgatcaatgattttcttgatactatcatatttct--attatatcgattgaaacgtgcaatattgtttccttattctacgatcaaagttt 231  Q
    |||||||||||||||||| |||||||||||||| ||||| | |||  ||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  12751927 aaattagtgtttgatcaaagattttcttgatacgatcatgtctctctattatatggattgaaacgtgcaatattgtttccttattctatgatcaaagttt 12751828  T
Q  232 ggttatgattttcttctttcttattgcataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaacat 331  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||  ||||||||| ||||||| || ||||||||||||||||||||| ||||||||||||    
T  12751827 ggttataattttcttctttcttattgcatatgacttctagaaggtctgaattactaggtaagtaagcacaaactcttttctacataattcttgaaaacat 12751728  T
Q  332 cttttatga 340  Q
    ||| |||||    
T  12751727 cttatatga 12751719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 439 - 680
Target Start/End: Complemental strand, 54687863 - 54687625
Alignment:
Q  439 tgttatgaaataaagacttagtggatatccatccttcttcaccttcctataaccccaattagtaagtgaatagttggtggaccttaatttccttgatcac 538  Q
    |||||||||||||||| ||| ||||||| ||| ||||||||| |||||||||||||| |||||||||||||| || | |||||| ||||| |||||||||    
T  54687863 tgttatgaaataaagaattactggatatacattcttcttcactttcctataacccca-ttagtaagtgaataattaggggacctcaattttcttgatcac 54687765  T
Q  539 acttacttacttatcttgtgtattataaataggactcatattgtattgtaaagatacatttgtgaagagaacaatagaaagtgttttcatcttctccttc 638  Q
      ||||||||| ||||||| || ||||||||||  |||||||||||| |||||||||| |||||||||||| |||| |||||| ||||||||||||||||    
T  54687764 --ttacttactcatcttgtatactataaatagggttcatattgtattataaagatacacttgtgaagagaataatacaaagtgatttcatcttctccttc 54687667  T
Q  639 ctcctgttctttgatcttgtgtttttcctttatttcttaaca 680  Q
    ||| | ||||||||| ||||| |||| |||||||||||||||    
T  54687666 ctcttcttctttgattttgtgcttttactttatttcttaaca 54687625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 478 - 680
Target Start/End: Original strand, 26997222 - 26997422
Alignment:
Q  478 caccttcctataaccccaattagtaagtgaatagttggtggaccttaatttccttgatcacacttacttacttatcttgtgtattataaataggactcat 577  Q
    |||||||||||||| |  |||||||||||||||||  ||| ||||||||  | ||||  ||||| ||||||| |||||||||| ||||||||||||||||    
T  26997222 caccttcctataactctcattagtaagtgaatagtcagtgaaccttaatagctttga--acactaacttactcatcttgtgtactataaataggactcat 26997319  T
Q  578 attgtattgtaaagatacatttgtgaagagaacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgtttttcctttatttctta 677  Q
    ||| ||||| ||||| | | |||||||||||| |||| |||||| ||||||||||||||| ||| | |||||||||||||||  ||| ||||||||||||    
T  26997320 attatattgcaaagacatacttgtgaagagaataatacaaagtgctttcatcttctcctttctcttcttctttgatcttgtgcatttactttatttctta 26997419  T
Q  678 aca 680  Q
    |||    
T  26997420 aca 26997422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 478 - 673
Target Start/End: Complemental strand, 52311378 - 52311185
Alignment:
Q  478 caccttcctataaccccaattagtaagtgaatagttggtggaccttaatttccttgatcacacttacttacttatcttgtgtattataaataggactcat 577  Q
    ||||||||||||||||| ||| || ||||||||||| ||||||||||||||| |||||||| |  ||||| | |||||||||  ||||||||||| ||||    
T  52311378 caccttcctataacccctattggtgagtgaatagttagtggaccttaatttctttgatcactc--acttagtcatcttgtgtcctataaataggattcat 52311281  T
Q  578 attgtattgtaaagatacatttgtgaagagaacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgtttttcctttattt 673  Q
    |||| | |||||||| |||||||||||||||| |||| ||| |||||||||| ||| |||| ||   ||||||||||||||||||||  |||||||    
T  52311280 attgcagtgtaaagacacatttgtgaagagaataatacaaaatgttttcatcatcttcttcttctacttctttgatcttgtgtttttagtttattt 52311185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 478 - 680
Target Start/End: Original strand, 26992025 - 26992228
Alignment:
Q  478 caccttcctataaccccaattagtaagtgaatagttggtggaccttaatttccttgatcacacttacttacttatcttgtgtattataaataggactcat 577  Q
    |||||||||||||  |  |||||||||||||||||| ||||||||||||| |||||||  |||| ||||| | |||  ||||| |||||||||| |||||    
T  26992025 caccttcctataaatctcattagtaagtgaatagttagtggaccttaattgccttgat--cactaacttattcatcccgtgtactataaatagggctcat 26992122  T
Q  578 attgtattgtaaagatacatttgtgaagag---aacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgtttttcctttatttc 674  Q
    ||| ||||| ||||||| | ||||||||||   || |||| |||||  |||||||||||| |||||| | |||||||||||||||  ||| |||||||||    
T  26992123 attatattgcaaagatatacttgtgaagagaataataatacaaagtactttcatcttctctttcctcttcttctttgatcttgtgcatttactttatttc 26992222  T
Q  675 ttaaca 680  Q
    ||||||    
T  26992223 ttaaca 26992228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 134 - 246
Target Start/End: Complemental strand, 2927074 - 2926962
Alignment:
Q  134 aaattagtgtttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattctacgatcaaagtttgg 233  Q
    |||||||||||| ||||| |||||| ||||||  ||||| | |||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||    
T  2927074 aaattagtgtttaatcaaagatttttttgatatgatcatgtctctattatatggattgaaacgtgcaatattgtttccttattctatgattaaagtttgg 2926975  T
Q  234 ttatgattttctt 246  Q
    |||| ||||||||    
T  2926974 ttataattttctt 2926962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 478 - 619
Target Start/End: Original strand, 20275934 - 20276073
Alignment:
Q  478 caccttcctataaccccaattagtaagtgaatagttggtggaccttaatttccttgatcacacttacttacttatcttgtgtattataaataggactcat 577  Q
    ||||||||||||||  | |||||||||||||||||| ||||||||||| | |||||||||| |  ||||||| ||||| |||| ||||||||||||||||    
T  20275934 caccttcctataacttccattagtaagtgaatagttagtggaccttaactgccttgatcactc--acttactcatcttatgtactataaataggactcat 20276031  T
Q  578 attgtattgtaaagatacatttgtgaagagaacaatagaaag 619  Q
    ||||||||||||||| |||  |||||| |||| |||| ||||    
T  20276032 attgtattgtaaagacacacatgtgaacagaataatacaaag 20276073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 347 - 474
Target Start/End: Original strand, 20275772 - 20275901
Alignment:
Q  347 gtactctttttccttcactagaattttttcc-cattgg-tttttctttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttat 444  Q
    ||||||||||| |||||||||||||||||   |||||| ||||||| |||||| ||||||| ||| |||||| | |||||||| ||||||||||||||||    
T  20275772 gtactcttttttcttcactagaatttttttttcattggatttttctctagtaaggttttaacgagacatatcatgatggacatccaagggggagtgttat 20275871  T
Q  445 gaaataaagacttagtggatatccatcctt 474  Q
    ||||||| |||||||||||| |||||||||    
T  20275872 gaaataatgacttagtggatgtccatcctt 20275901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 347 - 474
Target Start/End: Original strand, 26997060 - 26997189
Alignment:
Q  347 gtactctttttccttcactagaattttttc-ccattgg-tttttctttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttat 444  Q
    |||||||||||||||| ||||||||||||  ||||||| ||||||| | |||| ||||||| ||| |||||||| |||||||| ||||||||||||||||    
T  26997060 gtactctttttccttcgctagaattttttttccattggatttttctcttgtaaggttttaacgagacatatcctgatggacatccaagggggagtgttat 26997159  T
Q  445 gaaataaagacttagtggatatccatcctt 474  Q
    ||||||| |||||||||||| | |||||||    
T  26997160 gaaataatgacttagtggatgttcatcctt 26997189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 22748790 - 22748892
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattg-gtttttctttagtaatgttttaatgaggcata-tcctcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||||||||| || | |||||||||||||||| ||||||||    
T  22748790 gtactctttttccttcactagaatttttttccattgagtttttctctagtaaggttttaatgaggcatattcttgatggacattcaaggggaagtgttat 22748889  T
Q  445 gaa 447  Q
    |||    
T  22748890 gaa 22748892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 30673953 - 30673853
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  30673953 gtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcctcaatggacatccaagggggagtgtta 30673854  T
Q  444 t 444  Q
    |    
T  30673853 t 30673853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 12659444 - 12659345
Alignment:
Q  347 gtactctttttccttcactagaattttttcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||| |||||| |||||||||||||||||| || |||||||| ||||||||||||||||    
T  12659444 gtactctttttccttcactagaattttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 12659345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 347 - 501
Target Start/End: Complemental strand, 12746826 - 12746666
Alignment:
Q  347 gtactctttttccttcactagaattttttc-ccattggtttttctt-tagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttat 444  Q
    |||||||||||| ||||||| ||||||||  ||||||| |||| || |||||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  12746826 gtactctttttcattcactataattttttttccattgggtttttttatagtaaggttttaatgaggcgtatcctgatggacattcaagggggagtgttat 12746727  T
Q  445 gaaataaagacttagtggatatccatcct---tctt-caccttcctataaccccaattagt 501  Q
    |||  | |  |||||||||| ||||||||   |||| ||||||||||||||| | ||||||    
T  12746726 gaataataagcttagtggatgtccatcctcaatcttccaccttcctataaccactattagt 12746666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 1874246 - 1874146
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||| |||||| ||||||| ||||||||||||| |||||||| |||||||||||||||    
T  1874246 gtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaacgaggcatatcctcaatggacatccaagggggagtgtta 1874147  T
Q  444 t 444  Q
    |    
T  1874146 t 1874146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 23200431 - 23200531
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||| |||||| ||||||||||||||||||||| ||||||||  ||||||||||||||    
T  23200431 gtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcctcaatggacatctaagggggagtgtta 23200530  T
Q  444 t 444  Q
    |    
T  23200531 t 23200531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 20192846 - 20192744
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattgg-tttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    |||||||||||||||||||  |||||||||||| ||| ||||||| |||||| |||||||||||||||||||   |||||||| ||||||||||||||||    
T  20192846 gtactctttttccttcactgaaattttttcccactgggtttttctctagtaaggttttaatgaggcatatccgatatggacatccaagggggagtgttat 20192747  T
Q  445 gaa 447  Q
    |||    
T  20192746 gaa 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 6162154 - 6162255
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttatg 445  Q
    ||||||||||||||||||| |||||||||||  | ||||||||| |||||| || ||||||||||||||||   |||||||| |||||||||||||||||    
T  6162154 gtactctttttccttcactggaattttttccactgggtttttctctagtaaggtgttaatgaggcatatccgagatggacatccaagggggagtgttatg 6162253  T
Q  446 aa 447  Q
    ||    
T  6162254 aa 6162255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 349 - 444
Target Start/End: Complemental strand, 13753619 - 13753523
Alignment:
Q  349 actctttttccttcactagaattttttcccattggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||||||||||| ||||| | || | ||||||||||||||| |||||||||||| | |||||||| ||| ||||||||||||    
T  13753619 actctttttccttcactagaatttttttccattaggttatttttagtaatgttttattgaggcatatccttgatggacatccaaaggggagtgttat 13753523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 16325972 - 16325872
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||| ||||||||||||||||| ||| ||| ||||||||| |||||| |||||||||||||||||| || |||||||| |||||||||||||||    
T  16325972 gtactcttttaccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgtta 16325873  T
Q  444 t 444  Q
    |    
T  16325872 t 16325872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 12435600 - 12435500
Alignment:
Q  347 gtactctttttccttcactagaatttttt-cccattggtttttcttt-agtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||| |||||| ||||  || |||| ||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  12435600 gtactctttttccttcactagattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgtta 12435501  T
Q  444 t 444  Q
    |    
T  12435500 t 12435500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 29333542 - 29333642
Alignment:
Q  347 gtactctttttccttcactagaatttttt-cccattggtttttcttt-agtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||| |||||| ||||  || |||| ||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  29333542 gtactctttttccttcactagattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgtta 29333641  T
Q  444 t 444  Q
    |    
T  29333642 t 29333642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 42411012 - 42411112
Alignment:
Q  347 gtactctttttccttcactagaatttttt-cccattggtttttcttt-agtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||| |||||| ||||  || |||| ||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  42411012 gtactctttttccttcactagattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgtta 42411111  T
Q  444 t 444  Q
    |    
T  42411112 t 42411112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 496 - 673
Target Start/End: Original strand, 17365715 - 17365889
Alignment:
Q  496 attagtaagtgaatagttggtggaccttaatttccttgatcacacttacttacttatcttgtgtattataaataggactcatattgtattgtaaagatac 595  Q
    |||||| ||||||||||| ||||||||||||||| |||||  |||| ||||||| |||||||||  |||||||| | ||| |||| || |||||||| ||    
T  17365715 attagtgagtgaatagttagtggaccttaatttctttgat--cactcacttactcatcttgtgtcctataaataaggctc-tattatagtgtaaagaaac 17365811  T
Q  596 atttgtgaagagaacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgtttttcctttattt 673  Q
     |||||||| | || |||| ||| |||||||| | ||| |||||||   ||||||||| ||||| ||||  |||||||    
T  17365812 ctttgtgaacaaaataatacaaaatgttttcaccatcttcttcctctgcttctttgatattgtgcttttagtttattt 17365889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 53529598 - 53529700
Alignment:
Q  347 gtactctttttccttcactagaattttttcccatt-ggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    |||||||||||| |||  | ||||||||||| ||| ||||||||| |||||| ||||||| ||||||||||| | |||||||||||| ||||||||||||    
T  53529598 gtactctttttcattcgattgaattttttcctattaggtttttctctagtaaggttttaacgaggcatatccttgatggacattcaatggggagtgttat 53529697  T
Q  445 gaa 447  Q
    |||    
T  53529698 gaa 53529700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 911100 - 911000
Alignment:
Q  347 gtactctttttccttcactagaatttttt-cccattggtttttcttt-agtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||| |||||| ||||  || |||| ||| ||||| ||||||||||||||||||||| |||||||| |||| || |||||||    
T  911100 gtactctttttccttcactagattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaagaggaagtgtta 911001  T
Q  444 t 444  Q
    |    
T  911000 t 911000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 6407840 - 6407942
Alignment:
Q  347 gtactctttttccttcact-agaattttttcccattggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||| ||||||||||||||  |||  ||||||  |||||||||| | |||||||| ||||||||  |||||||||| ||||    
T  6407840 gtactctttttccttcactaagatttttttcccattgggcttttcttagtatggttttaatgatgtatatcctcgatggacatctaagggggagttttat 6407939  T
Q  445 gaa 447  Q
    |||    
T  6407940 gaa 6407942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 13999901 - 14000005
Alignment:
Q  347 gtactctttttccttcactagaattttttc----ccattggtttttctttagtaatg-ttttaatgaggcatatcct-catggacattcaagggggagtg 440  Q
    |||||||||||||||||||||||||||||     |||  ||||||||| || ||| | ||||||||||||||||||| ||| ||||| ||||||||||||    
T  13999901 gtactctttttccttcactagaattttttttcgacca--ggtttttctctactaaaggttttaatgaggcatatccttcatagacatccaagggggagtg 13999998  T
Q  441 ttatgaa 447  Q
    |||||||    
T  13999999 ttatgaa 14000005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 17246917 - 17246863
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  17246917 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 17246863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 24628699 - 24628753
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  24628699 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 24628753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 29120675 - 29120621
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  29120675 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 29120621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 56033835 - 56033781
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  56033835 acatcacttcagaagtagaactctatctgcttctgataagtgttttcagcttagg 56033781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 347 - 413
Target Start/End: Complemental strand, 25691447 - 25691379
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcat 413  Q
    |||| ||||||||||||||||||||||| ||| ||| ||||||||| |||||| |||||||||||||||    
T  25691447 gtacgctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcat 25691379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 14905127 - 14905181
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| | |||||||||||||||    
T  14905127 acatcacttcagaagtagaactctatctgcttctgatcaatgttttcagcttagg 14905181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 19570478 - 19570436
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaaa 136  Q
    |||||||||||||| |||||||||||||||||||| |||||||    
T  19570478 cacaattcaaccccccttcttgtgtttttctcaccttcaaaaa 19570436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 22676362 - 22676416
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||  |||| |||||||||||||| |||| |||||||||||||||||    
T  22676362 acatcacttcaaaagtagaactctatctgcttctgatcagtgttttcagcttagg 22676416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 680
Target Start/End: Original strand, 22746678 - 22746759
Alignment:
Q  598 ttgtgaagagaacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgtttttcctttatttcttaaca 680  Q
    |||||||||||| |||| |||||  ||||||||||| | ||||| | |||||||||||| |||||||  ||||||||||||||    
T  22746678 ttgtgaagagaataatacaaagtactttcatcttcttcctcctcgtcttctttgatcttatgttttt-gtttatttcttaaca 22746759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 23749833 - 23749779
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||| ||| |||| |||||||||||||||||    
T  23749833 acatcacttcagaagtagaactctatctacttctgatcagtgttttcagcttagg 23749779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 55379619 - 55379565
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||| ||||||||| |||| |||||||||||||||||    
T  55379619 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttagg 55379565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 11514497 - 11514456
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaa 135  Q
    |||||||||||||| |||||||||||||||||||| ||||||    
T  11514497 cacaattcaaccccccttcttgtgtttttctcaccttcaaaa 11514456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 12429128 - 12429037
Alignment:
Q  354 ttttccttcactagaattttttcccattggtttttcttt-agtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    ||||||||||||||  ||||||||  | ||||||| ||| ||||| || |||||||||||||||||| |||||||| ||||| ||||||||||    
T  12429128 ttttccttcactagt-ttttttccactgggtttttattttagtaaagtcttaatgaggcatatcctcaatggacatccaaggaggagtgttat 12429037  T

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Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 19611250 - 19611290
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaa 134  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  19611250 cacaattcaaccccccttcttgtgtttttctcaccttcaaa 19611290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 44397516 - 44397464
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagctta 70  Q
    |||||||||||| || | |||||||||||||| |||| |||||||||||||||    
T  44397516 acatcacttcagaagcagaactctatctgcttctgatcagtgttttcagctta 44397464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 4394006 - 4393907
Alignment:
Q  347 gtactctttttccttcactaga-attttttcccattggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    ||||| |||||||||||||||| |||||||||  |  | |||||| |||||| |||||| ||||| |||||||| |||||||| ||| || |||||||||    
T  4394006 gtactatttttccttcactagatattttttccactgagattttctctagtaaggttttattgaggtatatcctcgatggacatccaatggagagtgttat 4393907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 7740010 - 7739911
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    ||||| ||||||||||||||||||||||| | | | |||||||| ||||||| ||||||||||  ||||| ||| ||| | |||||| || |||||||||    
T  7740010 gtactttttttccttcactagaatttttttcaagtgggtttttcattagtaaagttttaatgaaccatattctcgatgaatattcaatggagagtgttat 7739911  T

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Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 13576950 - 13577005
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtg-ttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||| |||||||||||||    
T  13576950 acatcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttagg 13577005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 14836901 - 14836940
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  14836901 cacaattcaaccccccttcttgtgtttttctcaccttcaa 14836940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 22190076 - 22190037
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  22190076 cacaattcaacccctcttcttatgtttttctcaccttcaa 22190037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 40859938 - 40859899
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  40859938 cacaattcaaccccccttcttgtgtttttctcaccttcaa 40859899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 3500531 - 3500565
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  3500531 cacaattcaaccccccttcttgtgtttttctcacc 3500565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 3792640 - 3792586
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| | |  |||||||||||||||||    
T  3792640 acatcacttcagaagtagaactctatctgcttctaagcagtgttttcagcttagg 3792586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 5872834 - 5872800
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  5872834 cacaattcaaccccccttcttgtgtttttctcacc 5872800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 13027021 - 13026987
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  13027021 cacaattcaaccccccttcttgtgtttttctcacc 13026987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 15134950 - 15134916
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  15134950 cacaattcaaccccccttcttgtgtttttctcacc 15134916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 31267589 - 31267623
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  31267589 cacaattcaaccccccttcttgtgtttttctcacc 31267623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 33377601 - 33377567
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  33377601 cacaattcaaccccccttcttgtgtttttctcacc 33377567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 14116037 - 14115997
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaa 135  Q
    |||||||||||||| |||||||||||||||||||| ||||||    
T  14116037 cacaattcaacccc-cttcttgtgtttttctcaccttcaaaa 14115997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 177; Significance: 5e-95; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 134 - 354
Target Start/End: Complemental strand, 44125252 - 44125032
Alignment:
Q  134 aaattagtgtttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattctacgatcaaagtttgg 233  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  44125252 aaattagtgtttgatcaatgattttcttgatacgatcatatttctattatatggattgaaacgtgcaatattgtttccttattctactatcaaagtttgg 44125153  T
Q  234 ttatgattttcttctttcttattgcataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaacatct 333  Q
    ||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  44125152 ttatggttttcttctttcttattgcataagacttctagaaggcctgaattacaaggtaagcaatcacaaactcttttctacataactcttaaaaacatct 44125053  T
Q  334 tttatgaattgacgtactctt 354  Q
    |  |||||||||||| |||||    
T  44125052 tcaatgaattgacgttctctt 44125032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 134 - 354
Target Start/End: Original strand, 12989877 - 12990097
Alignment:
Q  134 aaattagtgtttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattctacgatcaaagtttgg 233  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||||||||||    
T  12989877 aaattagtgtttgatcaaagattttcttgatacgatcatatttctattatataaattgaaacgtgcaattttgtttccttattctatgatcaaagtttgg 12989976  T
Q  234 ttatgattttcttctttcttattgcataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaacatct 333  Q
    ||||||||||||| ||||||||| ||  |||||||| ||||  |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  12989977 ttatgattttcttgtttcttatttcacgagacttctcgaaggtctgaattacaaggtaagcaagcacaaactcttttctacataattcttgaaaacatct 12990076  T
Q  334 tttatgaattgacgtactctt 354  Q
    | ||||| ||||||| |||||    
T  12990077 tctatgagttgacgttctctt 12990097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 347 - 462
Target Start/End: Original strand, 39875628 - 39875744
Alignment:
Q  347 gtactctttttccttcactagaattttttcccatt-ggtttttctttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttatg 445  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| | |||||| ||||||||||| |||||||| |||||||| ||||| |||||||||||    
T  39875628 gtactctttttccttcactagaatttttttccattaggtttttttctagtaaggttttaatgagacatatcctgatggacatccaaggaggagtgttatg 39875727  T
Q  446 aaataaagacttagtgg 462  Q
    |||||| ||||||||||    
T  39875728 aaataatgacttagtgg 39875744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 347 - 474
Target Start/End: Complemental strand, 44122283 - 44122154
Alignment:
Q  347 gtactctttttccttcactagaatttttt-cccattgg-tttttctttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttat 444  Q
    |||||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  44122283 gtactctttttccttcactagattttttttcccattggatttttctatagtaaggttttaatgaggcatatcctgatggacatccaagggggagtgttat 44122184  T
Q  445 gaaataaagacttagtggatatccatcctt 474  Q
    |||  | |  |||||||||| |||||||||    
T  44122183 gaataataagcttagtggatgtccatcctt 44122154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 2168905 - 2168803
Alignment:
Q  347 gtactctttttccttcactagaattttttcccatt-ggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| |||||| |||||||||||||||||||   |||||||| ||||||||||||||||    
T  2168905 gtactctttttccttcactggaattttttcccattgggtttttctctagtaaggttttaatgaggcatatccgatatggacatccaagggggagtgttat 2168806  T
Q  445 gaa 447  Q
    |||    
T  2168805 gaa 2168803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 9724878 - 9724775
Alignment:
Q  347 gtactctttttccttcactagaattttttcccatt--ggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgtta 443  Q
    ||||||||||||||||||||||||||||||||| |  ||||||||| |||||| |||||||||||||||||||   |||||||| |||||||||||||||    
T  9724878 gtactctttttccttcactagaattttttcccactggggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgtta 9724779  T
Q  444 tgaa 447  Q
    ||||    
T  9724778 tgaa 9724775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 13980910 - 13980808
Alignment:
Q  347 gtactctttttccttcactagaattttttcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    ||||||||||||||||| | ||||||||||||| | |||||||||||||||| ||||||||||||||||||||| |||||||| |||||  |||||||||    
T  13980910 gtactctttttccttcaatggaattttttcccactaggtttttctttagtaaggttttaatgaggcatatcctcgatggacatccaaggaagagtgttat 13980811  T
Q  445 gaa 447  Q
    |||    
T  13980810 gaa 13980808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 13990737 - 13990839
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| |||||| |||||||||||||||||||   |||||||| ||||||||||||||||    
T  13990737 gtactctttttccttcactggaattttttcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 13990836  T
Q  445 gaa 447  Q
    |||    
T  13990837 gaa 13990839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 20459265 - 20459171
Alignment:
Q  134 aaattagtgtttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattctacgatcaaag 228  Q
    |||||||||||||| ||| |||||||||||||| ||||| | ||| |||||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  20459265 aaattagtgtttgaccaaagattttcttgatacgatcatgtctcttttatatggattgaaacatgcaatattgtttccttattctatgatcaaag 20459171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 23344281 - 23344383
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| |||||| |||||||||||||||||||   |||||||| ||||||||||||||||    
T  23344281 gtactctttttccttcactggaattttttcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 23344380  T
Q  445 gaa 447  Q
    |||    
T  23344381 gaa 23344383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 40800892 - 40800790
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| |||||| |||||||||||||||||||   |||||||| ||||||||||||||||    
T  40800892 gtactctttttccttcactggaattttttcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 40800793  T
Q  445 gaa 447  Q
    |||    
T  40800792 gaa 40800790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 2978489 - 2978389
Alignment:
Q  347 gtactctttttccttcactagaatttttt--cccattggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||||  ||||| ||||||  |||| ||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  2978489 gtactctttttccttcactagaattttttttcccatgggttttattttaataaggttttaatgaggcatatcctcgatggacatccaagggggagtgtta 2978390  T
Q  444 t 444  Q
    |    
T  2978389 t 2978389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 3110762 - 3110661
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattggtttttctttagtaatgttttaatgaggcatatc-ctcatggacattcaagggggagtgttatg 445  Q
    ||||||||||||||||||| ||||||||||||||||| ||||  ||||||| ||||||||||||||||||    |||||||| |||||||||||||||||    
T  3110762 gtactctttttccttcactggaattttttcccattgggtttttcttagtaaggttttaatgaggcatatctgagatggacatccaagggggagtgttatg 3110663  T
Q  446 aa 447  Q
    ||    
T  3110662 aa 3110661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 21883329 - 21883429
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||| || ||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  21883329 gtactctttttccttcactagaatttttctcctattaggtttttctctaataaggttttaatgaggcatatcctcaatggacatccaagggggagtgtta 21883428  T
Q  444 t 444  Q
    |    
T  21883429 t 21883429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 49486978 - 49486878
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| | | ||| ||||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  49486978 gtactctttttccttcactagaatttttcttctattaggtttttctctagtaaggttttaatgaggcatatcctcaatggacatccaagggggagtgtta 49486879  T
Q  444 t 444  Q
    |    
T  49486878 t 49486878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 347 - 446
Target Start/End: Complemental strand, 15636545 - 15636444
Alignment:
Q  347 gtactctttttccttcactagaattttttcccatt-ggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    |||||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||||||| ||||||| | | | |||| ||||||||||||||||    
T  15636545 gtactctttttccttcactagaatttttccccattgggtttttctctagtaaggttttaatgagacatatccttgacgaacatccaagggggagtgttat 15636446  T
Q  445 ga 446  Q
    ||    
T  15636445 ga 15636444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 538 - 682
Target Start/End: Complemental strand, 8832640 - 8832496
Alignment:
Q  538 cacttacttacttatcttgtgtattataaataggactcatattgtattgtaaagatacatttgtgaagagaacaatagaaagtgttttcatcttctcctt 637  Q
    |||| ||||||| |||||||||| ||||||||||  ||||||||||||| ||||| ||| |  ||||||||| |||| |||||| ||||||| |||||||    
T  8832640 cactcacttactcatcttgtgtactataaatagggttcatattgtattgcaaagacacagtcttgaagagaataatacaaagtgatttcatcctctcctt 8832541  T
Q  638 cctcctgttctttgatcttgtgtttttcctttatttcttaacata 682  Q
    |||| | | ||||||||  ||| |||| ||||||||  |||||||    
T  8832540 cctcttctcctttgatcccgtgcttttactttattttataacata 8832496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 15752753 - 15752653
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||| |||||| |||||||||||||||||| || |||||||| ||||||||| |||||    
T  15752753 gtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggaatgtta 15752654  T
Q  444 t 444  Q
    |    
T  15752653 t 15752653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 347 - 445
Target Start/End: Complemental strand, 3170400 - 3170300
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattg-gtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    ||||||||||||||| ||||||||||||| |||| | |||||||| |||||| |||||||||||| |||||||| |||||||| ||| ||| ||||||||    
T  3170400 gtactctttttcctttactagaatttttttccatcgagtttttctctagtaaggttttaatgaggtatatcctcgatggacatccaaagggaagtgttat 3170301  T
Q  445 g 445  Q
    |    
T  3170300 g 3170300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 347 - 472
Target Start/End: Original strand, 12990833 - 12990962
Alignment:
Q  347 gtactctttttccttcactaga--attttttcccattg-gtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgtt 442  Q
    ||||||||||||||||||||||   |||||| |||||| |||||||| |||||| |||||||||| |||||||| | |||||||| ||||||| ||||||    
T  12990833 gtactctttttccttcactagattttttttttccattgagtttttctctagtaaggttttaatgaagcatatccttgatggacatccaaggggaagtgtt 12990932  T
Q  443 atgaaataaagacttagtggatatccatcc 472  Q
    |||||   |||  ||||||||| |||||||    
T  12990933 atgaatataagtgttagtggatgtccatcc 12990962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 17033027 - 17033129
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||||||||||||| |||   ||||||| | |||||| ||||||||||||||||||| | | |||||| ||||| ||||||||||    
T  17033027 gtactctttttccttcactagaatttttttccagcgggtttttttctagtaaggttttaatgaggcatatccttgaaggacatccaaggaggagtgttat 17033126  T
Q  445 gaa 447  Q
    |||    
T  17033127 gaa 17033129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 347 - 495
Target Start/End: Complemental strand, 20459048 - 20458890
Alignment:
Q  347 gtactctttttccttcactagaa---ttttttcccatt-ggtttttctttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgtt 442  Q
    ||||| ||||||||||| ||| |   |||||| ||||| ||||||||| |||||| ||||||||||| |||||||| |||| ||| ||||||||||||||    
T  20459048 gtactatttttccttcattaggattttttttttccattgggtttttctctagtaaggttttaatgagacatatcctgatgggcatccaagggggagtgtt 20458949  T
Q  443 atga--aataaagacttagtggatatccatcct---tctt-caccttcctataacccca 495  Q
    ||||  ||| |  | ||||||||| ||||||||   |||| ||||||||||||||||||    
T  20458948 atgaataattataagttagtggatgtccatccttaatcttccaccttcctataacccca 20458890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 6090039 - 6089985
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  6090039 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 6089985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 14968680 - 14968626
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  14968680 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 14968626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 29952283 - 29952337
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  29952283 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 29952337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 30001437 - 30001491
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  30001437 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 30001491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 38178491 - 38178545
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| || | |||||||||||||| ||||||||||||||||||||||    
T  38178491 acatcacttcagaagaagaactctatctgcttctgattagtgttttcagcttagg 38178545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 40799201 - 40799147
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  40799201 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 40799147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 47206974 - 47206920
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  47206974 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 47206920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 52283106 - 52283052
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  52283106 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 52283052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 21880033 - 21880109
Alignment:
Q  143 tttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattcta 219  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||  |||||| | ||||| |||||||  ||||||||    
T  21880033 tttgatcaaagattttcttgatacgatcatatttctgttatatgtattgaatcttgcaagattgtttatttattcta 21880109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 609
Target Start/End: Original strand, 39875817 - 39875906
Alignment:
Q  518 gaccttaatttccttgatcacacttacttacttatcttgtgtattataaataggactcatattgtattgtaaagatacatttgtgaagagaa 609  Q
    |||||||||| |||||||||| |  ||||||| |||||||||| ||||||||   ||| |||||||||| ||||| ||| ||||||||||||    
T  39875817 gaccttaattgccttgatcactc--acttactcatcttgtgtactataaataaagctcctattgtattgcaaagacacacttgtgaagagaa 39875906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 681
Target Start/End: Complemental strand, 44126795 - 44126675
Alignment:
Q  562 tataaataggactcatattgtattgtaaa-gatacatttgtgaagagaacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgt 660  Q
    ||||||||||||  |||||||| ||| || || ||| |||||||||||| |||| |||||  ||||||||||| ||| ||| | || ||||||||| ||     
T  44126795 tataaataggacctatattgtaatgtgaatgacacacttgtgaagagaataatacaaagtactttcatcttcttctttctcttcttatttgatcttatgc 44126696  T
Q  661 ttttcctttatttcttaacat 681  Q
    ||||  |||||||||||||||    
T  44126695 ttttaatttatttcttaacat 44126675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 16076370 - 16076331
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  16076370 cacaattcaaccccccttcttgtgtttttctcaccatcaa 16076331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 21639203 - 21639242
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  21639203 cacaattcaaccccccttcttgtgtttttctcaccatcaa 21639242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 21880121 - 21880205
Alignment:
Q  258 cataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaacatcttttatgaattgac 346  Q
    |||||||||||| ||||   ||||||||||||||||||    |||| |||| ||||||||| ||||||||| ||||| |||||||||||    
T  21880121 cataagacttctagaaggattgaattacaaggtaagca----caaattcttctctacataattcttgaaaatatcttctatgaattgac 21880205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 1241921 - 1241975
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| || ||||||||||| |||| |||||||||||||||||    
T  1241921 acatcacttcagaagtagaaatctatctgcttctgatcagtgttttcagcttagg 1241975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 11222107 - 11222053
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    ||||||||| || |||| |||||||||||||| |||| |||||||||||||||||    
T  11222107 acatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttagg 11222053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 11222859 - 11222805
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    ||||||||| || |||| |||||||||||||| |||| |||||||||||||||||    
T  11222859 acatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttagg 11222805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 12727082 - 12727136
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| || ||||||||||| |||| |||||||||||||||||    
T  12727082 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttagg 12727136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 14954721 - 14954667
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||| ||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  14954721 acattacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 14954667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 19250310 - 19250344
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||||||||||||||||||||||||    
T  19250310 cacaattcaacccctcttcttgtgtttttctcacc 19250344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 19885924 - 19885978
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||| ||||| |||| |||||||||||||||||    
T  19885924 acatcacttcagaagtagaactctatttgcttctgataagtgttttcagcttagg 19885978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 20628308 - 20628362
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| | |||||||||||||||    
T  20628308 acatcacttcagaagtagaactctatctgcttctgatcactgttttcagcttagg 20628362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 444
Target Start/End: Original strand, 21477443 - 21477497
Alignment:
Q  391 ttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    ||||||| || |||||||||||||||||| |||||||| ||||||||||||||||    
T  21477443 ttagtaaggtgttaatgaggcatatcctcaatggacatccaagggggagtgttat 21477497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 25399101 - 25399147
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttc 64  Q
    |||||||||||| |||| |||||||||||||| ||||||||||||||    
T  25399101 acatcacttcagaagtagaactctatctgcttctgattagtgttttc 25399147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 49554356 - 49554410
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| | |||||||||||||||    
T  49554356 acatcacttcagaagtagaactctatctgcttctgatcaatgttttcagcttagg 49554410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 53057571 - 53057623
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagctta 70  Q
    |||||||||||| |||| |||||||||| ||| ||||||| ||||||||||||    
T  53057571 acatcacttcagaagtagaactctatctacttctgattagagttttcagctta 53057623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 4433202 - 4433163
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  4433202 cacaattcaaccccccttcttgtgtttttctcaccttcaa 4433163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 7870376 - 7870273
Alignment:
Q  347 gtactctttttccttcactagaa-ttttttcccatt-ggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgtta 443  Q
    |||||||||||| ||||||| || ||||||  |||| ||||||||| |||||| |||||| |||||| ||||| | || ||||| ||||||||||| |||    
T  7870376 gtactctttttctttcactataatttttttttcattgggtttttctctagtaaggttttagtgaggcgtatccttgatagacatccaagggggagtatta 7870277  T
Q  444 tgaa 447  Q
    ||||    
T  7870276 tgaa 7870273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 14954645 - 14954606
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  14954645 cacaattcaaccccccttcttgtgtttttctcaccttcaa 14954606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 22150442 - 22150403
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  22150442 cacaattcaaccccccttcttgtgtttttctcaccttcaa 22150403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 24776358 - 24776405
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttca 65  Q
    |||||||||||| |||| |||||||||||||| |||| ||||||||||    
T  24776358 acatcacttcagaagtagaactctatctgcttctgatcagtgttttca 24776405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 417
Target Start/End: Original strand, 25468537 - 25468605
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattggtttttctttagtaatgttttaatgaggcatatcc 417  Q
    |||||||||||||||||| | |||||||| ||| || ||||  |||||||| ||||||||||| |||||||    
T  25468537 gtactctttttccttcaccataattttttaccactgatttt--tttagtaaggttttaatgagacatatcc 25468605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 1241997 - 1242031
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  1241997 cacaattcaaccccacttcttgtgtttttctcacc 1242031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 2025331 - 2025297
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  2025331 cacaattcaaccccccttcttgtgtttttctcacc 2025297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 2560420 - 2560386
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  2560420 cacaattcaaccccccttcttgtgtttttctcacc 2560386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 3237929 - 3237895
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  3237929 cacaattcaaccccccttcttgtgtttttctcacc 3237895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 6174532 - 6174494
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatca 132  Q
    ||||| |||||||| ||||||||||||||||||||||||    
T  6174532 cacaactcaaccccccttcttgtgtttttctcaccatca 6174494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 9994686 - 9994728
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaaa 136  Q
    |||||||||||||| |||||| ||||||||||||| |||||||    
T  9994686 cacaattcaaccccccttcttatgtttttctcaccttcaaaaa 9994728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 15663531 - 15663565
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  15663531 cacaattcaaccccccttcttgtgtttttctcacc 15663565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 16031738 - 16031704
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||| ||||||||||||||||||||||    
T  16031738 cacaattcaacctctcttcttgtgtttttctcacc 16031704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 17910799 - 17910833
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  17910799 cacaattcaaccccccttcttgtgtttttctcacc 17910833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 17960843 - 17960809
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  17960843 cacaattcaaccccccttcttgtgtttttctcacc 17960809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 18122494 - 18122548
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||  |||| |||||||||||| ||||    
T  18122494 acatcacttcagaagtagaactctatctgctcctgatcagtgttttcagcgtagg 18122548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 19888147 - 19888181
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  19888147 cacaattcaaccccccttcttgtgtttttctcacc 19888181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 21735614 - 21735580
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  21735614 cacaattcaaccccccttcttgtgtttttctcacc 21735580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 22804867 - 22804921
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||  |||| |||||||||||||| |||| |||||||||| ||||||    
T  22804867 acatcacttcaaaagtagaactctatctgcttctgatcagtgttttcaacttagg 22804921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 28165418 - 28165384
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  28165418 cacaattcaaccccccttcttgtgtttttctcacc 28165384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 355 - 447
Target Start/End: Original strand, 29225201 - 29225295
Alignment:
Q  355 tttccttcactagaattttttcccattg-gtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttatgaa 447  Q
    |||| ||||||||||| ||||  ||||| |||||||| || ||| |||||||||||||||||| || |||||||| |||| | |||| |||||||    
T  29225201 tttctttcactagaatattttttcattgagtttttctctaataaggttttaatgaggcatatcttcgatggacatccaagagagagtattatgaa 29225295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 46797316 - 46797358
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaaa 136  Q
    |||| ||||||||| |||||||||||||||||||| |||||||    
T  46797316 cacagttcaaccccccttcttgtgtttttctcaccttcaaaaa 46797358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 52919735 - 52919681
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||  | || |||||||||||||| |||| |||||||||||||||||    
T  52919735 acatcacttcaaaaatagaactctatctgcttgtgatcagtgttttcagcttagg 52919681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 8875047 - 8875088
Alignment:
Q  94 cacaattcaacccctc-ttcttgtgtttttctcaccatcaaa 134  Q
    |||||||||||||||| ||||||||||||||||||| |||||    
T  8875047 cacaattcaacccctccttcttgtgtttttctcaccttcaaa 8875088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 12727158 - 12727199
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaa 135  Q
    |||||||||||||  |||||||||||||||||||| ||||||    
T  12727158 cacaattcaaccctccttcttgtgtttttctcaccttcaaaa 12727199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 19250236 - 19250277
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtg 59  Q
    |||||||||||| |||  ||||||||||||||||||||||||    
T  19250236 acatcacttcagaagtggaactctatctgcttttgattagtg 19250277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 19889782 - 19889839
Alignment:
Q  15 tggacatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    ||||||||||||||| || | |||||||| ||||| | || |||||||||||||||||    
T  19889782 tggacatcacttcagaagcagaactctatttgcttctaatcagtgttttcagcttagg 19889839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 22770776 - 22770817
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaa 135  Q
    |||| ||||||||| |||||||||||||||||||| ||||||    
T  22770776 cacacttcaaccccccttcttgtgtttttctcaccttcaaaa 22770817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 128
Target Start/End: Complemental strand, 27849463 - 27849430
Alignment:
Q  95 acaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| |||||||||||||||||||    
T  27849463 acaattcaacccctattcttgtgtttttctcacc 27849430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 49643607 - 49643664
Alignment:
Q  15 tggacatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||| |||||||||  || | |||||||| |||||||||| |||||||||||||||||    
T  49643607 tggaaatcacttcataagcagaactctatttgcttttgatcagtgttttcagcttagg 49643664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 169; Significance: 3e-90; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 142 - 346
Target Start/End: Original strand, 29531986 - 29532190
Alignment:
Q  142 gtttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattctacgatcaaagtttggttatgatt 241  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29531986 gtttgatcaatgattttcttggtacgatcatatttctattatatggattgaaacgtgcaatattgtttccttattctacgatcaaagtttgattatgatt 29532085  T
Q  242 ttcttctttcttattgcataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaacatcttttatgaa 341  Q
    |||||||||||||||||||||||||||| |||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  29532086 ttcttctttcttattgcataagacttctggaaggcctgaattacaaagtaagcaagcacaaactcttttctacataactcttgaaaacatcttctatgaa 29532185  T
Q  342 ttgac 346  Q
    |||||    
T  29532186 ttgac 29532190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 132 - 354
Target Start/End: Original strand, 26025431 - 26025650
Alignment:
Q  132 aaaaattagtgtttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattctacgatcaaagttt 231  Q
    |||||||||||||||||||| ||||| |||||||| |||||||||||| ||||| ||||||||| ||||||||||||||||||||||| |||||||||||    
T  26025431 aaaaattagtgtttgatcaaagatttgcttgatacgatcatatttctagtatatggattgaaacatgcaatattgtttccttattctatgatcaaagttt 26025530  T
Q  232 ggttatgattttcttctttcttattgcataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaacat 331  Q
    ||||||||||   |||||||||||| |||||||||| | |||| ||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||    
T  26025531 ggttatgatt---ttctttcttatttcataagacttttagaaggcctgaattacaaggtaagcaagcacaaactcttttgtacataattcttgaaaacat 26025627  T
Q  332 cttttatgaattgacgtactctt 354  Q
    ||| ||||||||||||| |||||    
T  26025628 cttctatgaattgacgttctctt 26025650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 478 - 637
Target Start/End: Complemental strand, 40279315 - 40279158
Alignment:
Q  478 caccttcctataaccccaattagtaagtgaatagttggtggaccttaatttccttgatcacacttacttacttatcttgtgtattataaataggactcat 577  Q
    |||||||||||||| || |||||||||||||||||| ||||||||||||| |||||||||| |  ||||||| |||||||||| ||||||||||  ||||    
T  40279315 caccttcctataactcccattagtaagtgaatagttagtggaccttaattgccttgatcactc--acttactcatcttgtgtactataaatagggttcat 40279218  T
Q  578 attgtattgtaaagatacatttgtgaagagaacaatagaaagtgttttcatcttctcctt 637  Q
    ||||||||| ||||| |||||||||||||||| |||| ||||||||||||||||||||||    
T  40279217 attgtattgcaaagacacatttgtgaagagaataatataaagtgttttcatcttctcctt 40279158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 476 - 663
Target Start/End: Complemental strand, 40274529 - 40274346
Alignment:
Q  476 ttcaccttcctataaccccaattagtaagtgaa-tagttggtggaccttaatttccttgatcacacttacttacttatcttgtgtattataaataggact 574  Q
    ||||||||| |||||| || ||||||||||||| ||||| |||||| |||||| |||||||||| |  ||||||| ||||||||||||||||||||| ||    
T  40274529 ttcaccttcttataactcccattagtaagtgaaatagttagtggactttaattgccttgatcactc--acttactcatcttgtgtattataaatagggct 40274432  T
Q  575 catattgtattgtaaagatacatttgtgaagagaacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgtttt 663  Q
     ||||||||||| ||||| ||| |||||||||||| |||| |||||| |||||||||||||||||||   |||||||||||| ||||||    
T  40274431 aatattgtattgcaaagacacacttgtgaagagaataatacaaagtgctttcatcttctccttcctc---ttctttgatcttttgtttt 40274346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 347 - 474
Target Start/End: Complemental strand, 40274688 - 40274560
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattg-gtttttctttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttatg 445  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| || ||| |||||||||| ||||||||| |||||||| |||||||||||||||||    
T  40274688 gtactctttttccttcactagaatttttttccattgagtttttctctaataaggttttaatgaagcatatcctgatggacatccaagggggagtgttatg 40274589  T
Q  446 aaataaagacttagtggatatccatcctt 474  Q
    |||||| |||||||||||| |||||||||    
T  40274588 aaataatgacttagtggatgtccatcctt 40274560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 236 - 346
Target Start/End: Complemental strand, 247628 - 247518
Alignment:
Q  236 atgattttcttctttcttattgcataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaacatcttt 335  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||| |     
T  247628 atgattttcttctttcttattgcataagacttctagaaggcctgaattacaaggtaagcaagcacaaactcttctctacacaactcttgaaaacatcgtc 247529  T
Q  336 tatgaattgac 346  Q
    |||||||||||    
T  247528 tatgaattgac 247518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 11441945 - 11441844
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattg-gtttttctttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttatg 445  Q
    ||||||||||||||||| ||||||||||| |||||| |||||||| |||||| |||||||||||||||||| | |||||||| |||||| ||||||||||    
T  11441945 gtactctttttccttcattagaatttttttccattgagtttttctatagtaaggttttaatgaggcatatcttgatggacatccaagggagagtgttatg 11441846  T
Q  446 aa 447  Q
    ||    
T  11441845 aa 11441844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 31093201 - 31093101
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  31093201 gtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcctcaatggacatccaagggggagtgtta 31093102  T
Q  444 t 444  Q
    |    
T  31093101 t 31093101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 11660083 - 11660182
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccattggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    |||||||||||||||||||||||||||| ||| ||| | |||||| |||||| ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  11660083 gtactctttttccttcactagaatttttctcctattaggttttctctagtaaggttttaatgaggcatatcctcaatggacatccaagggggagtgttat 11660182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 27179224 - 27179122
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| |||||| |||||||||||||||||||   |||||||| ||||||||||||||||    
T  27179224 gtactctttttccttcactggaattttttcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 27179125  T
Q  445 gaa 447  Q
    |||    
T  27179124 gaa 27179122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 18535233 - 18535133
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| ||| ||| |||||||||  ||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  18535233 gtactctttttccttcactagaatttttctcctattaggtttttctccagtaaggttttaatgaggcatatcctcaatggacatccaagggggagtgtta 18535134  T
Q  444 t 444  Q
    |    
T  18535133 t 18535133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 17721622 - 17721725
Alignment:
Q  347 gtactctttttccttcactagaattt-tttcccattggtt-tttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||| ||| || |||||| ||||| |||||| ||||||||||||| |||| || ||||||||||||||||||||||||    
T  17721622 gtactctttttccttcactagaatttattttcctttggttatttctatagtaaggttttaatgaggcgtatcatcgatggacattcaagggggagtgtta 17721721  T
Q  444 tgaa 447  Q
    ||||    
T  17721722 tgaa 17721725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 29547645 - 29547748
Alignment:
Q  347 gtactctttttccttcactagaa-ttttttcccattgg-tttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    ||||||||||||||||||||||| |||||| |||| || ||||||  |||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  29547645 gtactctttttccttcactagaaatttttttccatcgggtttttccatagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgtta 29547744  T
Q  444 tgaa 447  Q
    ||||    
T  29547745 tgaa 29547748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 15716529 - 15716631
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattg-gtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| || |||||||| |||||| |||||||||||||||||||   ||| |||| ||||||||||||||||    
T  15716529 gtactctttttccttcactggaattttttcccactgagtttttctctagtaaggttttaatgaggcatatccgagatgaacatccaagggggagtgttat 15716628  T
Q  445 gaa 447  Q
    |||    
T  15716629 gaa 15716631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 33493191 - 33493089
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattgg-tttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||| ||| ||| ||||||| |||||| |||||||||||||||||||   |||||||| ||||||||||||||||    
T  33493191 gtactctttttccttcactggaatttttttccactgggtttttctctagtaaggttttaatgaggcatatccaagatggacatccaagggggagtgttat 33493092  T
Q  445 gaa 447  Q
    |||    
T  33493091 gaa 33493089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 37356987 - 37356887
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||| ||||||| ||| ||| ||||||||| |||||| |||||||||||||||||| || |||||||| |||||||||||||||    
T  37356987 gtactctttttccttcactaaaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgtta 37356888  T
Q  444 t 444  Q
    |    
T  37356887 t 37356887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 145644 - 145541
Alignment:
Q  347 gtactctttttccttcactagaatt-ttttcccattgg-tttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgtta 443  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||| | |||| |||| ||| |||||||||| | |||||||| |||||||||||||||    
T  145644 gtactctttttccttcactagaatttttttcccattggatttttctctggtaaggtttcaataaggcatatcctttatggacatccaagggggagtgtta 145545  T
Q  444 tgaa 447  Q
    ||||    
T  145544 tgaa 145541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 22576127 - 22576025
Alignment:
Q  347 gtactctttttccttcactagaattttttcccatt-ggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| ||||||  |||||||||||||||||| | ||||| || ||||||| ||| ||||    
T  22576127 gtactctttttccttcactagaattttttctcattgggtttttctctagtaagattttaatgaggcatatccttgatggaaatccaaggggaagtattat 22576028  T
Q  445 gaa 447  Q
    |||    
T  22576027 gaa 22576025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 28519179 - 28519280
Alignment:
Q  347 gtactctttttccttcactagaatttttt--cccattggtttttcttt-agtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtt 442  Q
    |||||||||||||||||||||| ||||||  ||||  || |||| ||| ||||| ||||||||||||||||||||| |||||||| ||||||||||||||    
T  28519179 gtactctttttccttcactagatttttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgtt 28519278  T
Q  443 at 444  Q
    ||    
T  28519279 at 28519280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 38991005 - 38991104
Alignment:
Q  347 gtactctttttccttcactaga-attttttccca-ttggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    ||||||||||||||||||||||  ||||||||||   ||||||  |||||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  38991005 gtactctttttccttcactagattttttttcccacggggttttattttagtaa-gttttaatgaggcatatcctcgatggacatccaagggggagtgtta 38991103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 447
Target Start/End: Original strand, 26028599 - 26028697
Alignment:
Q  353 tttttccttcactagaa--ttttttcccattgg-tttttctttagtaatgttttaatgaggcatatcct-catggacattcaagggggagtgttatgaa 447  Q
    ||||||||| |||||||  |||||||||||||| ||||||| || ||| |||||||||||||| ||||| ||||||||| ||||||||||| |||||||    
T  26028599 tttttcctttactagaaatttttttcccattggatttttctctaataaggttttaatgaggcacatccttcatggacatccaagggggagtattatgaa 26028697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 349 - 447
Target Start/End: Complemental strand, 27417698 - 27417602
Alignment:
Q  349 actctttttccttcactagaattttttcccattggtttttct-ttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttatgaa 447  Q
    ||||||||||||||||   |||||||| ||||||| |||| | ||||||| ||||||||||| |||||||| |||||||| |||| ||||||||| ||||    
T  27417698 actctttttccttcac---aatttttttccattggattttttcttagtaaggttttaatgagacatatcctgatggacatccaagagggagtgttgtgaa 27417602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 347 - 472
Target Start/End: Original strand, 27317508 - 27317634
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattg-gtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    |||||||||||||||||||| |  ||||||| |||| ||||||  ||| ||| ||||||||||||||||| ||| ||| |||||||| ||||||||||||    
T  27317508 gtactctttttccttcacta-agatttttcctattgcgttttttcttaataaggttttaatgaggcatattctcgatgtacattcaacggggagtgttat 27317606  T
Q  445 gaaataaagacttagtggatatccatcc 472  Q
    |||   || | ||||||||| |||||||    
T  27317607 gaatataacaattagtggatgtccatcc 27317634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 23037293 - 23037345
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagctta 70  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||    
T  23037293 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagctta 23037345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 25449357 - 25449405
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcag 66  Q
    |||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  25449357 acatcacttcagaagtataactctatctgcttctgatcagtgttttcag 25449405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 1899656 - 1899602
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    ||||||||| || |||| |||||||||||||| |||| |||||||||||||||||    
T  1899656 acatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttagg 1899602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 2266395 - 2266341
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| ||||||||||| || |||| |||||||||||||||||    
T  2266395 acatcacttcagaagtagaactctatctgattctgatcagtgttttcagcttagg 2266341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 2833965 - 2833911
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| | |||||||||||| |||| |||||||||||||||||    
T  2833965 acatcacttcagaagtagagctctatctgcttctgatcagtgttttcagcttagg 2833911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 14294052 - 14294106
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    ||||||||| || ||||||||||||||| ||| |||| |||||||||||||||||    
T  14294052 acatcactttagaagtataactctatctccttctgatcagtgttttcagcttagg 14294106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 382 - 447
Target Start/End: Original strand, 16168704 - 16168770
Alignment:
Q  382 ggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttatgaa 447  Q
    ||||||| |||||||| ||||||||||||||||||| | ||| |||| ||||| |||||||||||||    
T  16168704 ggtttttttttagtaaagttttaatgaggcatatccttgatgaacatccaaggaggagtgttatgaa 16168770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 22428108 - 22428162
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||| ||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  22428108 acatcatttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 22428162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 46181692 - 46181726
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||||||||||||||||||||||||    
T  46181692 cacaattcaacccctcttcttgtgtttttctcacc 46181726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 1577158 - 1577109
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagc 67  Q
    |||||||||||| |||| |||||||||||||| |||| ||||||||||||    
T  1577158 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagc 1577109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 24218603 - 24218562
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaa 135  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  24218603 cacaattcaacaccccttcttgtgtttttctcaccatcaaaa 24218562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 19171210 - 19171250
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaa 134  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  19171210 cacaattcaaccccccttcttgtgtttttctcaccttcaaa 19171250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 606 - 674
Target Start/End: Original strand, 29530252 - 29530320
Alignment:
Q  606 agaacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgtttttcctttatttc 674  Q
    |||| |||| ||||||||||||||| || ||||||| | ||||||||||||||| ||||  ||||||||    
T  29530252 agaataatacaaagtgttttcatctccttcttcctcttcttctttgatcttgtgcttttagtttatttc 29530320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 14264198 - 14264253
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtg-ttttcagcttagg 72  Q
    |||||||||||| |||| || |||||||||||||||| |||| |||||||||||||    
T  14264198 acatcacttcagaagtagaattctatctgcttttgatcagtgtttttcagcttagg 14264253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 17017816 - 17017777
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  17017816 cacaattcaaccccccttcttgtgtttttctcaccttcaa 17017777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 19037203 - 19037160
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaaat 137  Q
    |||||||||||||| |||||||||||||||||||| ||| ||||    
T  19037203 cacaattcaaccccccttcttgtgtttttctcaccttcataaat 19037160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 29215107 - 29215056
Alignment:
Q  20 atcacttcaggagtataactctatctgcttttgattagtgttttcagcttag 71  Q
    |||||||||| |||  |||||||||||||| |||| ||||||||||||||||    
T  29215107 atcacttcagaagtggaactctatctgcttctgatcagtgttttcagcttag 29215056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 7309024 - 7308990
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  7309024 cacaattcaaccccccttcttgtgtttttctcacc 7308990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 15552769 - 15552839
Alignment:
Q  347 gtactctttttccttcactagaattttttcccatt-ggtttttctttagtaatgttttaatgaggcatatc 416  Q
    |||||||||||||||||||   |||||||| |||| |||||||  ||||||| ||||||||||| ||||||    
T  15552769 gtactctttttccttcactgagattttttcacatttggttttttcttagtaaggttttaatgagacatatc 15552839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 22153059 - 22153025
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  22153059 cacaattcaaccccccttcttgtgtttttctcacc 22153025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 23975684 - 23975718
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  23975684 cacaattcaaccccccttcttgtgtttttctcacc 23975718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 30892298 - 30892264
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  30892298 cacaattcaaccccccttcttgtgtttttctcacc 30892264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 32786784 - 32786818
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  32786784 cacaattcaaccccccttcttgtgtttttctcacc 32786818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 400 - 495
Target Start/End: Original strand, 32808721 - 32808821
Alignment:
Q  400 ttttaatgaggcatatcc-tcatggacattcaagggggagtgttatgaaataaagacttagtggatatccatcct---tctt-caccttcctataacccc 494  Q
    |||||||||||||| ||| | |||||||||||||||||||| |||||||  | | ||||  ||||| ||||||||   |||| |||||||||||||||||    
T  32808721 ttttaatgaggcatgtccattatggacattcaagggggagtattatgaataataaacttcatggatttccatccttaatcttccaccttcctataacccc 32808820  T
Q  495 a 495  Q
    |    
T  32808821 a 32808821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 38281672 - 38281618
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||| |||||| || |||| |||||||||||||||||    
T  38281672 acatcacttcagaagtagaactatatctgtttctgatcagtgttttcagcttagg 38281618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 51657288 - 51657322
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  51657288 cacaattcaaccccccttcttgtgtttttctcacc 51657322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 17025846 - 17025879
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcac 127  Q
    |||||||||||||| |||||||||||||||||||    
T  17025846 cacaattcaaccccccttcttgtgtttttctcac 17025879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 30892374 - 30892321
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttag 71  Q
    ||||||||| || |||| |||||||| ||||| |||| ||||||||||||||||    
T  30892374 acatcactttagaagtagaactctatttgcttctgatcagtgttttcagcttag 30892321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 1e-89; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 133 - 340
Target Start/End: Complemental strand, 7388303 - 7388096
Alignment:
Q  133 aaaattagtgtttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattctacgatcaaagtttg 232  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  7388303 aaaattagtgtttgatcaatgattttcttgatacgatcatatttctattatatggattgaaacgtgcaatattgttttcttattctacgatcaaagtttg 7388204  T
Q  233 gttatgattttcttctttcttattgcataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaacatc 332  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  7388203 gttatggttttcttctttcttattgcataagacttctagaagacctgaattacaaggtaagtaagcacaaactcttttctacataattcttgaaaacatc 7388104  T
Q  333 ttttatga 340  Q
    || |||||    
T  7388103 ttatatga 7388096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 134 - 354
Target Start/End: Original strand, 25227325 - 25227547
Alignment:
Q  134 aaattagtgtttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattctacgatcaaagtttgg 233  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  25227325 aaattagtgtttgatcaatgattttcttgatacggtcatatttctattatatggattgaaacgtgcaatattgtttccttattctacgatctaagtttgg 25227424  T
Q  234 ttatgattttcttctttcttattgcataagacttcttgaagtcctgaat---tacaaggtaagcaaacacaaactcttttctacataactcttgaaaaca 330  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||||   |||| ||||||||| ||||||||||||||||||||||||||| |||||    
T  25227425 ttatgattttcttctttcttattgcaaaagacttctagaaggcctgaattactacagggtaagcaagcacaaactcttttctacataactcttg-aaaca 25227523  T
Q  331 tcttttatgaattgacgtactctt 354  Q
    |||| ||||||||||||| |||||    
T  25227524 tcttctatgaattgacgttctctt 25227547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 134 - 348
Target Start/End: Original strand, 19086329 - 19086541
Alignment:
Q  134 aaattagtgtttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattctacgatcaaagtttgg 233  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| | |||| |||| ||||| ||||||||||||||||| ||||||| |||||    
T  19086329 aaattagtgtttgatcaaagattttcttgatacaatcatatttctattatttggatttaaacctgcaaaattgtttccttattctatgatcaaaatttgg 19086428  T
Q  234 ttatgattttcttctttcttattgcataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaacatct 333  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||| ||| |||||||||||||||||  || |||| ||||||  |    
T  19086429 ttatgattttcttctttcttattgcataagacttctagaaggcctaaattacaaggtaatcaagcacaaactcttttctactgaattcttaaaaaca--t 19086526  T
Q  334 tttatgaattgacgt 348  Q
    | |||||||||||||    
T  19086527 tatatgaattgacgt 19086541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 347 - 614
Target Start/End: Original strand, 19912168 - 19912439
Alignment:
Q  347 gtactctttttccttcactagaattttttc-ccattgg-tttttctttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttat 444  Q
    ||||||||||||| |||||||||||||||  ||||||| ||||||| ||| || |||||||||||||||||||| |||||||| ||||||||||||||||    
T  19912168 gtactctttttccatcactagaattttttttccattgggtttttctataggaaggttttaatgaggcatatcctaatggacatccaagggggagtgttat 19912267  T
Q  445 gaaataaagacttagtggatatccatcct---tctt-caccttcctataaccccaattagtaagtgaatagttggtggaccttaatttccttgatcacac 540  Q
    |||  | ||||||||||||| |||| |||   |||| ||||||||||||||||| |||| | | || || ||| || | |||||||| | |||||  |||    
T  19912268 gaataatagacttagtggatgtccacccttaatcttccaccttcctataacccctattattgaatgtatggttagtagtccttaattgctttgat--cac 19912365  T
Q  541 ttacttacttatcttgtgtattataaataggactcatattgtattgt-aaagatacatttgtgaagagaacaata 614  Q
    | |||| || || ||||||  ||||||||||||  ||||| || ||| ||| ||||| |||||||||||| ||||    
T  19912366 tcacttgctcat-ttgtgtcctataaataggacctatattataatgtaaaatatacacttgtgaagagaataata 19912439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 5836331 - 5836229
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattg-gtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    |||||||||||||||||||| |||||||||| |||| |||||||| |||||| ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  5836331 gtactctttttccttcactaaaattttttcctattgagtttttctctagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgttat 5836232  T
Q  445 gaa 447  Q
    |||    
T  5836231 gaa 5836229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 161 - 354
Target Start/End: Original strand, 14189654 - 14189846
Alignment:
Q  161 tgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattctacgatca---aagtttggttatgattttcttctttcttattg 257  Q
    |||||| |||||||||||||||||| |||| || | ||||| ||||||||||||||||  ||| |   ||||||||| ||||||||||||||| ||||||    
T  14189654 tgatacgatcatatttctattatatggattaaatcatgcaagattgtttccttattcttagataattaaagtttggtaatgattttcttcttttttattg 14189753  T
Q  258 cataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaacatcttttatgaattgacgtactctt 354  Q
    ||||||| |||| |||  | ||||| ||| | ||||    ||||||||||| ||||||||| | ||||||| ||||| |||||||||| || |||||    
T  14189754 cataagagttctagaatgcttgaatcacaggctaag----cacaaactcttctctacataatttttgaaaatatcttctatgaattgatgttctctt 14189846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 636187 - 636289
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| |||||| |||||||||||||||||||   |||||||| ||||||||||||||||    
T  636187 gtactctttttccttcactggaattttttcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 636286  T
Q  445 gaa 447  Q
    |||    
T  636287 gaa 636289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 22430253 - 22430355
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| |||||| |||||||||||||||||||   |||||||| ||||||||||||||||    
T  22430253 gtactctttttccttcactggaattttttcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 22430352  T
Q  445 gaa 447  Q
    |||    
T  22430353 gaa 22430355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 22435847 - 22435949
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| |||||| |||||||||||||||||||   |||||||| ||||||||||||||||    
T  22435847 gtactctttttccttcactggaattttttcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 22435946  T
Q  445 gaa 447  Q
    |||    
T  22435947 gaa 22435949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 7910217 - 7910115
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| |||||| ||||||||||| |||||||   |||||||| ||||||||||||||||    
T  7910217 gtactctttttccttcactggaattttttcccactgggtttttctctagtaaggttttaatgagacatatccgagatggacatccaagggggagtgttat 7910118  T
Q  445 gaa 447  Q
    |||    
T  7910117 gaa 7910115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 14898688 - 14898790
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcata-tcctcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| |||||| |||||||||||||||| ||   |||||||| ||||||||||||||||    
T  14898688 gtactctttttccttcactggaattttttcccactgggtttttctctagtaaggttttaatgaggcatattcgagatggacatccaagggggagtgttat 14898787  T
Q  445 gaa 447  Q
    |||    
T  14898788 gaa 14898790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 19089368 - 19089470
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattgg-tttttctttagtaatgttttaatgaggcatatc-ctcatggacattcaagggggagtgttat 444  Q
    ||||||||||| ||||||||||||||||| |||| || ||||||| |||||| ||||||||||||||||||  |||||||||| |||| |||||||||||    
T  19089368 gtactcttttttcttcactagaatttttttccatcgggtttttctctagtaaggttttaatgaggcatatctttcatggacatccaagagggagtgttat 19089467  T
Q  445 gaa 447  Q
    |||    
T  19089468 gaa 19089470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 347 - 527
Target Start/End: Complemental strand, 34111242 - 34111056
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattg-gtttttctttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttatg 445  Q
    |||||||||||| ||||||| ||||||||  || |  |||||| | |||||| |||||||||||||||||||| ||||||||  || |||||||||||||    
T  34111242 gtactctttttcattcactataattttttttcaataagtttttttctagtaaagttttaatgaggcatatcctgatggacatcgaaaggggagtgttatg 34111143  T
Q  446 aaataaaga-cttagtggatatccatcctt----cttcaccttcctataaccccaattagtaagtgaatagttggtggaccttaatt 527  Q
    ||  || ||  ||||||||| |||||||||     | |||||||||||||| |  |||||| ||||||||||| |||||||||||||    
T  34111142 aataaatgattttagtggatgtccatccttaatcatccaccttcctataactcgcattagtgagtgaatagttagtggaccttaatt 34111056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 43776897 - 43776998
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttatg 445  Q
    ||||||||||||||||||| |||||||| ||  | ||||||||| |||||| |||||||||||||||||||   |||||||| |||||||||||||||||    
T  43776897 gtactctttttccttcactggaatttttcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttatg 43776996  T
Q  446 aa 447  Q
    ||    
T  43776997 aa 43776998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 1525547 - 1525649
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| | |||||||||  |||||  ||||||||||||||||||   |||||||| ||||||||||||||||    
T  1525547 gtactctttttccttcactggaattttttcccactaggtttttctccagtaagattttaatgaggcatatccgagatggacatccaagggggagtgttat 1525646  T
Q  445 gaa 447  Q
    |||    
T  1525647 gaa 1525649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 7385109 - 7385004
Alignment:
Q  347 gtactctttttccttcactagaatt-ttttcccattg-gtttttctttagtaatgttttaatgagg--catatcc-tcatggacattcaagggggagtgt 441  Q
    ||||||||||||||||||||||||| ||||| ||||| |||||| | |||||||||||||||||||  || |||| |||||||||| |||||||||||||    
T  7385109 gtactctttttccttcactagaatttttttctcattgagtttttttctagtaatgttttaatgaggcacacatccttcatggacatccaagggggagtgt 7385010  T
Q  442 tatgaa 447  Q
    ||||||    
T  7385009 tatgaa 7385004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 19437784 - 19437691
Alignment:
Q  354 ttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||||| ||| ||| ||||||||| |||||| |||||||||||||||||| || |||||||| ||||||||||||||||    
T  19437784 ttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 19437691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 24053542 - 24053442
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| ||  ||| ||||||||| |||||| |||||||||||||||||| || ||||||||  ||||||||||||||    
T  24053542 gtactctttttccttcactagaatttttctcttattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatctaagggggagtgtta 24053443  T
Q  444 t 444  Q
    |    
T  24053442 t 24053442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 25445312 - 25445213
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||| |||||| ||||||||||||||||||||| ||||||| || | |||||||||||    
T  25445312 gtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcctcaatggaca-tctaaggggagtgtta 25445214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 347 - 418
Target Start/End: Complemental strand, 21289800 - 21289728
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattgg-tttttctttagtaatgttttaatgaggcatatcct 418  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| | |||| |||||||||||| |||||||    
T  21289800 gtactctttttccttcactggaattttttcccattggatttttctatggtaaggttttaatgaggtatatcct 21289728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 17319770 - 17319667
Alignment:
Q  347 gtactctttttccttcactagaatt-ttttcccattg-gtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgtta 443  Q
    ||||| ||||||||||||||||||| ||||||||  | |||||||| ||| || |||||||| |||||||||| | |||||||| |||||||||||||||    
T  17319770 gtactatttttccttcactagaatttttttcccaccgagtttttctctagcaaggttttaattaggcatatccttgatggacatccaagggggagtgtta 17319671  T
Q  444 tgaa 447  Q
    ||||    
T  17319670 tgaa 17319667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 39038431 - 39038485
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  39038431 acatcacttcagaagtataactctatctgcttctgatcagtgttttcagcttagg 39038485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 11311953 - 11312056
Alignment:
Q  347 gtactctttttccttcactagaa-ttttttcccattgg-tttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgtta 443  Q
    ||||| ||||||||||||||||| |||||||| ||||| ||||||| |||||| |||||||||||||| |||| || ||||||| |||| | || |||||    
T  11311953 gtactttttttccttcactagaatttttttcctattggatttttctctagtaaggttttaatgaggcacatccttcgtggacatccaagagagaatgtta 11312052  T
Q  444 tgaa 447  Q
    ||||    
T  11312053 tgaa 11312056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 25231888 - 25231991
Alignment:
Q  347 gtactctttttccttcactagaattttttcc-cattgg-tttttctttagtaatgttttaatgaggcatatc-ctcatggacattcaagggggagtgtta 443  Q
    |||||| |||||||||||||||||||||| | ||| || ||||||| |||||| ||||||||||||||||||  | ||||| || ||||||||| |||||    
T  25231888 gtactcattttccttcactagaatttttttctcatcgggtttttctctagtaaggttttaatgaggcatatctttgatggatatccaagggggaatgtta 25231987  T
Q  444 tgaa 447  Q
    ||||    
T  25231988 tgaa 25231991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 24851463 - 24851517
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  24851463 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 24851517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 28712497 - 28712551
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| ||||||||||||||||||| |||| | |||||||||||||||    
T  28712497 acatcacttcagaagtataactctatctgcttctgatcaatgttttcagcttagg 28712551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 349 - 444
Target Start/End: Complemental strand, 43287645 - 43287547
Alignment:
Q  349 actctttttccttcactagaattttt-tcccattgg-tttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    ||||||||| |||||||||||||||| ||| ||| | ||||||| || ||| ||||||||||||||||||||| ||| |||| ||||||| ||||||||    
T  43287645 actcttttttcttcactagaatttttctcctattagatttttctctattaaggttttaatgaggcatatcctcaatgaacatccaaggggaagtgttat 43287547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 45087788 - 45087842
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| ||||||| ||||||||||| |||| |||||||||||||||||    
T  45087788 acatcacttcagaagtataaatctatctgcttctgatcagtgttttcagcttagg 45087842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 6574957 - 6575009
Alignment:
Q  20 atcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  6574957 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 6575009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 43290945 - 43290869
Alignment:
Q  143 tttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattcta 219  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||  |||||| | ||||| |||||||  ||||||||    
T  43290945 tttgatcaaagattttcttgatacgatcatatttctgttatatgtattgaatcttgcaagattgtttatttattcta 43290869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 43290857 - 43290773
Alignment:
Q  258 cataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaacatcttttatgaattgac 346  Q
    |||||||||||| ||||   ||||||||||||||||||    |||| |||| ||||||||| ||||||||| ||||| |||||||||||    
T  43290857 cataagacttctagaaggattgaattacaaggtaagca----caaattcttctctacataattcttgaaaatatcttatatgaattgac 43290773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 22455750 - 22455804
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||| ||||||||    
T  22455750 acatcacttcagaagtagaactctatctgcttctgatcagtgttttgagcttagg 22455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 23234262 - 23234208
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||| ||||    
T  23234262 acatcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcatagg 23234208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 24778640 - 24778586
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| || |||||||||| ||||| |||| |||||||||||||||||    
T  24778640 acatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttagg 24778586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 25188711 - 25188657
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||  |||||||||||||| |||| |||||||||||||||||    
T  25188711 acatcacttcagaagtggaactctatctgcttctgatcagtgttttcagcttagg 25188657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 28702015 - 28702069
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||| ||||| |||| |||||||||||||||||    
T  28702015 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttagg 28702069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 20152790 - 20152839
Alignment:
Q  23 acttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    ||||||| |||| |||||||||||||| ||||||||||||||| ||||||    
T  20152790 acttcagaagtagaactctatctgcttctgattagtgttttcaacttagg 20152839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 20569537 - 20569594
Alignment:
Q  15 tggacatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||| |||||||||| || |||||||||| ||||| |||| |||||||||||||||||    
T  20569537 tggaaatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttagg 20569594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 6391975 - 6391923
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagctta 70  Q
    |||||||||||| |||| |||||||| ||||| |||| |||||||||||||||    
T  6391975 acatcacttcagaagtagaactctatatgcttctgatcagtgttttcagctta 6391923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 22797642 - 22797602
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaa 134  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  22797642 cacaattcaaccccccttcttgtgtttttctcaccttcaaa 22797602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 1041566 - 1041523
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaaat 137  Q
    |||||||||||||| |||||||||||||||||||| ||| ||||    
T  1041566 cacaattcaaccccccttcttgtgtttttctcaccttcataaat 1041523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 24450318 - 24450357
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  24450318 cacaattcaaccccccttcttgtgtttttctcaccttcaa 24450357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 28702091 - 28702130
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  28702091 cacaattcaaccccccttcttgtgtttttctcaccttcaa 28702130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 31328840 - 31328879
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  31328840 cacaattcaaccccccttcttgtgtttttctcaccttcaa 31328879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 31335561 - 31335600
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  31335561 cacaattcaaccccccttcttgtgtttttctcaccttcaa 31335600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 6391899 - 6391865
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  6391899 cacaattcaaccccccttcttgtgtttttctcacc 6391865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 13964778 - 13964828
Alignment:
Q  22 cacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||| |||| |||| ||||||||| |||| |||||||||||||||||    
T  13964778 cacttcagaagtagaactttatctgcttctgatcagtgttttcagcttagg 13964828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 353 - 447
Target Start/End: Complemental strand, 16443578 - 16443480
Alignment:
Q  353 tttttccttcactagaatttttt-cccattgg-tttttctttagtaatg-ttttaatgaggcatatcct-catggacattcaagggggagtgttatgaa 447  Q
    |||||||||||||| | |||||| ||||  || ||||||| |||||| | |||||||||| |||||| | ||||||||| |||||||||||||||||||    
T  16443578 tttttccttcactaaattttttttcccaccggatttttctctagtaaaggttttaatgagacatatctttcatggacatccaagggggagtgttatgaa 16443480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 16735836 - 16735870
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||| ||||||||||||||||||||||    
T  16735836 cacaattcaacctctcttcttgtgtttttctcacc 16735870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 19539685 - 19539651
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  19539685 cacaattcaaccccccttcttgtgtttttctcacc 19539651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 20569616 - 20569650
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  20569616 cacaattcaaccccccttcttgtgtttttctcacc 20569650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 22188898 - 22188952
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||| ||||||||| |||| |||||||||||| ||||    
T  22188898 acatcacttcagaagtagaactatatctgcttctgatcagtgttttcagcatagg 22188952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 22257501 - 22257447
Alignment:
Q  15 tggacatcacttcaggagtataactctatctgcttttgattagtgttttcagctt 69  Q
    |||| |||||||||| || |||||||||| ||||| |||| ||||||||||||||    
T  22257501 tggaaatcacttcagaagcataactctatttgcttctgataagtgttttcagctt 22257447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 28551787 - 28551821
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  28551787 cacaattcaaccccccttcttgtgtttttctcacc 28551821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 28732715 - 28732749
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  28732715 cacaattcaaccccccttcttgtgtttttctcacc 28732749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 38780705 - 38780651
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    ||||||||||||  ||| || ||||||||||| |||||||||||||| |||||||    
T  38780705 acatcacttcagatgtagaattctatctgcttatgattagtgttttcggcttagg 38780651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 40780618 - 40780564
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| || | |||||||| ||||| |||| |||||||||||||||||    
T  40780618 acatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttagg 40780564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 45087864 - 45087898
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  45087864 cacaattcaaccccccttcttgtgtttttctcacc 45087898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 22801783 - 22801730
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttag 71  Q
    ||||||||| || |||| |||||||||||||| | || ||||||||||||||||    
T  22801783 acatcactttagaagtagaactctatctgcttataatcagtgttttcagcttag 22801730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 24575344 - 24575287
Alignment:
Q  15 tggacatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||| |||||||||| || | |||||||| ||||| |||| |||||||||||||||||    
T  24575344 tggaaatcacttcagaagcaaaactctatttgcttctgatcagtgttttcagcttagg 24575287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 1e-83; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 134 - 348
Target Start/End: Complemental strand, 8289464 - 8289246
Alignment:
Q  134 aaattagtgtttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatatt----gtttccttattctacgatcaaagt 229  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||    ||||||||||||||| ||||||||    
T  8289464 aaattagtgtttgatcaatgattttcttgatacgatcatatttctattatatggattgaaacatgcaatattaattgtttccttattctacaatcaaagt 8289365  T
Q  230 ttggttatgattttcttctttcttattgcataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaac 329  Q
    ||||||||||||||||||||||||||||| |||||||||| |||| ||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  8289364 ttggttatgattttcttctttcttattgcgtaagacttctagaaggcctaaattacaaggtaatcaagcacaaactcttttctacataactcttgaaaac 8289265  T
Q  330 atcttttatgaattgacgt 348  Q
    ||||| |||||||||||||    
T  8289264 atcttctatgaattgacgt 8289246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 134 - 340
Target Start/End: Original strand, 42939387 - 42939595
Alignment:
Q  134 aaattagtgtttgatcaatgattttcttgatactatcatatttct--attatatcgattgaaacgtgcaatattgtttccttattctacgatcaaagttt 231  Q
    |||||||||||||||||| |||||||||||||| ||||| | |||  ||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  42939387 aaattagtgtttgatcaaagattttcttgatacgatcatgtctctctattatatggattgaaacgtgcaatattgtttccttattctatgatcaaagttt 42939486  T
Q  232 ggttatgattttcttctttcttattgcataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaacat 331  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||  |||||||| |||||||| || ||||| |||||||||||| || ||||| ||||||    
T  42939487 ggttataattttcttctttcttattgcatatgacttctagaaggtctgaattataaggtaagtaagcacaagctcttttctacagaattcttgtaaacat 42939586  T
Q  332 cttttatga 340  Q
    ||| |||||    
T  42939587 cttatatga 42939595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 441 - 678
Target Start/End: Complemental strand, 33190509 - 33190270
Alignment:
Q  441 ttatgaaataaagacttagtggatatccatccttc-----ttcaccttcctataaccccaattagtaagtgaatagttggtggaccttaatttccttgat 535  Q
    ||||||||||| |||||||||||| | |||||||      |||||||||||||||   | ||| ||||||||||||||  ||||||||| || |||||||    
T  33190509 ttatgaaataatgacttagtggatgtacatccttaagtctttcaccttcctataatttccattggtaagtgaatagttactggaccttagttgccttgat 33190410  T
Q  536 cacacttacttacttatcttgtgtattataaataggactcatattgtattgtaaagatacatttgtgaagagaacaatagaaagtgttttcatcttctcc 635  Q
    ||| |  ||||||| |||||||||||||||| |||| |||||||||||||| ||||| ||| |||||||||||| |||| |||||| |||||||||||||    
T  33190409 cactc--acttactcatcttgtgtattataa-taggtctcatattgtattgcaaagacacacttgtgaagagaataatacaaagtgctttcatcttctcc 33190313  T
Q  636 ttcctcctgttctttgatcttgtgtttttcctttatttcttaa 678  Q
    |||||| | ||||||||||||||| |||| |||||||||||||    
T  33190312 ttcctcttcttctttgatcttgtgcttttactttatttcttaa 33190270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 496 - 673
Target Start/End: Original strand, 39865464 - 39865639
Alignment:
Q  496 attagtaagtgaatagttggtggaccttaatttccttgatcacacttacttacttatcttgtgtattataaataggactcatattgtattgtaaagatac 595  Q
    |||||||||||||||||| |||||||||||||  ||||||||| |  ||||||| |||||||||| |||||||||| ||||||| |||||| ||||| ||    
T  39865464 attagtaagtgaatagttagtggaccttaattgtcttgatcactc--acttactcatcttgtgtactataaatagggctcatatcgtattgcaaagacac 39865561  T
Q  596 atttgtgaagagaacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgtttttcctttattt 673  Q
    | |  ||||||||| |||| |||||| ||||||||||||||||||| | ||||||||||||||| |||| ||||||||    
T  39865562 actcttgaagagaataatacaaagtgctttcatcttctccttcctcttcttctttgatcttgtgcttttactttattt 39865639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 454 - 678
Target Start/End: Complemental strand, 26617935 - 26617712
Alignment:
Q  454 acttagtggatatccatccttc----ttcaccttcctataaccccaattagtaagtgaatagttggtggaccttaatttccttgatcacacttacttact 549  Q
    ||||||||||| |||||||||     ||||| ||||||||||||| |||| | ||||||||||| |||||||||||||  ||||||||| |  ||||| |    
T  26617935 acttagtggatttccatccttagtctttcactttcctataacccccattaatgagtgaatagttagtggaccttaattatcttgatcactc--acttatt 26617838  T
Q  550 tatcttgtgtattataaataggactcatattgtattgtaaagatacatttgtgaagagaacaatagaaagtgttttcatcttctccttcctcctgttctt 649  Q
     ||||||  |  |||||||||| ||||||||| |||||||||| ||| |||||||||||| |||| |||||||||||||||||| |||||||   |||||    
T  26617837 catcttgaatcctataaatagggctcatattgaattgtaaagacacacttgtgaagagaataatacaaagtgttttcatcttcttcttcctc---ttctt 26617741  T
Q  650 tgatcttgtgtttttcctttatttcttaa 678  Q
    |||||||||| ||||  ||||||||||||    
T  26617740 tgatcttgtgcttttagtttatttcttaa 26617712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 25498960 - 25499061
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttatg 445  Q
    |||||||||||||||||||||||||||||||  | ||||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  25498960 gtactctttttccttcactagaattttttccattgggtttttctctagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgttatg 25499059  T
Q  446 aa 447  Q
    ||    
T  25499060 aa 25499061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 558126 - 558024
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattgg-tttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||| |||||| ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  558126 gtactctttttccttcactggaattttttcccactgggtttttctctagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgttat 558027  T
Q  445 gaa 447  Q
    |||    
T  558026 gaa 558024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 351 - 583
Target Start/End: Complemental strand, 14719609 - 14719368
Alignment:
Q  351 tctttttccttcactagaattttttcccattg-gtttttctt-tagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttatgaaa 448  Q
    ||||||||||||||||||||||||| |||||| |||||| || |||||| |||||||||||||||||| |  ||||||| ||| |||||||||||||||     
T  14719609 tctttttccttcactagaatttttttccattgagttttttttctagtaaagttttaatgaggcatatcatgttggacatgcaaaggggagtgttatgaat 14719510  T
Q  449 taaagac-ttagtggatatccatcct---tctt-caccttcctataaccccaattagtaagtga----atagttggtggaccttaatttccttgatcaca 539  Q
     || ||| ||||||||| ||| ||||   |||| ||||||||||||||||| |||||| |||||    |||||| |||||||||||||   |||||  ||    
T  14719509 aaatgactttagtggatgtccgtccttagtcttccaccttcctataacccccattagtgagtgaatatatagttagtggaccttaattattttgat--ca 14719412  T
Q  540 cttacttacttatcttgtgtattataaataggactcatattgta 583  Q
    || |  || | || |||| | |||||||||||||||||||||||    
T  14719411 ctcagctattcattttgtatcttataaataggactcatattgta 14719368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 8248015 - 8248115
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  8248015 gtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcctcaatggacatccaagggggagtgtta 8248114  T
Q  444 t 444  Q
    |    
T  8248115 t 8248115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 340547 - 340447
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||| || ||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  340547 gtactctttttccttcactagaatttttctcctattaggtttttctctaataaggttttaatgaggcatatcctcaatggacatccaagggggagtgtta 340448  T
Q  444 t 444  Q
    |    
T  340447 t 340447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 32148382 - 32148484
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattgg-tttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||| | ||||||||||||| ||| ||||||| |||||| |||||||||||||||||||   |||||||| ||||||||||||||||    
T  32148382 gtactctttttccttcattggaattttttcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 32148481  T
Q  445 gaa 447  Q
    |||    
T  32148482 gaa 32148484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 346 - 474
Target Start/End: Original strand, 7578426 - 7578554
Alignment:
Q  346 cgtactctttttccttcactagaattttttcccattgg-tttttctttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttat 444  Q
    ||||||||||||| |||||| || |||||| ||||||| ||||||| ||||||  ||||||| ||||||||||| |||||||| ||||||||||||||||    
T  7578426 cgtactctttttcattcact-gattttttttccattgggtttttctctagtaagattttaataaggcatatcct-atggacatccaagggggagtgttat 7578523  T
Q  445 gaaataaagac-ttagtggatatccatcctt 474  Q
    |||  || ||| ||||||||| |||||||||    
T  7578524 gaataaatgactttagtggatgtccatcctt 7578554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 16648328 - 16648430
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| |||||| ||||||||||| |||||||   |||||||| ||||||||| ||||||    
T  16648328 gtactctttttccttcactggaattttttcccactgggtttttctctagtaaggttttaatgagacatatccgaaatggacatccaagggggaatgttat 16648427  T
Q  445 gaa 447  Q
    |||    
T  16648428 gaa 16648430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 17622689 - 17622791
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| |||||| ||||||||||| |||||||   |||||||| ||||||||| ||||||    
T  17622689 gtactctttttccttcactggaattttttcccactgggtttttctctagtaaggttttaatgagacatatccgaaatggacatccaagggggaatgttat 17622788  T
Q  445 gaa 447  Q
    |||    
T  17622789 gaa 17622791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 29185430 - 29185531
Alignment:
Q  347 gtactctttttccttcactagaa--ttttttccca-ttggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtt 442  Q
    |||||||||||||||||||||||  ||||||||||   ||||||  |||||||| ||||||||||||||||||||| |||||||| ||||||||||||||    
T  29185430 gtactctttttccttcactagaattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgtt 29185529  T
Q  443 at 444  Q
    ||    
T  29185530 at 29185531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 42208798 - 42208900
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattgg-tttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    |||||||||||||||||||  |||||||||||| ||| ||||||| |||||| ||||||||||||||| |||    ||||||| ||||||||||||||||    
T  42208798 gtactctttttccttcactgaaattttttcccactggatttttctctagtaaggttttaatgaggcatgtccgaggtggacatccaagggggagtgttat 42208897  T
Q  445 gaa 447  Q
    |||    
T  42208898 gaa 42208900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 25830641 - 25830542
Alignment:
Q  347 gtactctttttccttcactagaatt-ttttcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    ||||||||||||||||||||||||| ||||  |||| ||||||  |||||||| ||||||| ||||||||||||| |||||||||||| |||||||||||    
T  25830641 gtactctttttccttcactagaatttttttttcattgggttttattttagtaaggttttaacgaggcatatcctcgatggacattcaa-ggggagtgtta 25830543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 20125172 - 20125274
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattggtttttct-ttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    |||||||||||| ||||||   ||||||||||||||| |||| | ||||||| ||||||| |||||||||| |  |||||||| ||||||||||||||||    
T  20125172 gtactctttttctttcactgagattttttcccattggattttttcttagtaaggttttaacgaggcatatctttgatggacatccaagggggagtgttat 20125271  T
Q  445 gaa 447  Q
    |||    
T  20125272 gaa 20125274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 2499337 - 2499283
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||| ||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  2499337 acatcatttcagaagtagaactctatctgcttctgattagtgttttcagcttagg 2499283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 4493853 - 4493799
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  4493853 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 4493799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 20362554 - 20362658
Alignment:
Q  347 gtactctttttccttcactagaattttttc--ccattgg-tttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgtt 442  Q
    ||||||||||| ||||||||  |||||||   ||||||| |||||| ||||||| ||||||||||||||||||| | |||||||| |||  |||||||||    
T  20362554 gtactcttttttcttcactaagatttttttttccattgggtttttccttagtaaggttttaatgaggcatatccatgatggacatccaaaagggagtgtt 20362653  T
Q  443 atgaa 447  Q
    |||||    
T  20362654 atgaa 20362658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 343850 - 343774
Alignment:
Q  143 tttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattcta 219  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||  |||||| | ||||| |||||||  ||||||||    
T  343850 tttgatcaaagattttcttgatacgatcatatttctgttatatgtattgaatcttgcaagattgtttatttattcta 343774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 35954762 - 35954814
Alignment:
Q  20 atcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  35954762 atcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcttagg 35954814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 343762 - 343678
Alignment:
Q  258 cataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaacatcttttatgaattgac 346  Q
    |||||||||||| ||||   ||||||||||||||||||    |||| |||| ||||||||| ||||||||| ||||| |||||||||||    
T  343762 cataagacttctagaaggattgaattacaaggtaagca----caaattcttctctacataattcttgaaaatatcttctatgaattgac 343678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 19328859 - 19328910
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagctt 69  Q
    |||||||||||| |||| |||||||||||||| |||| ||||||||||||||    
T  19328859 acatcacttcagaagtagaactctatctgcttgtgatcagtgttttcagctt 19328910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 13034702 - 13034756
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||| ||||||||| |||| |||||||||||||||||    
T  13034702 acatcacttcagaagtagaactgtatctgcttctgatcagtgttttcagcttagg 13034756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 13473336 - 13473390
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||| ||||||||| |||| |||||||||||||||||    
T  13473336 acatcacttcagaagtagaactatatctgcttctgatcagtgttttcagcttagg 13473390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 16033172 - 16033138
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||||||||||||||||||||||||    
T  16033172 cacaattcaacccctcttcttgtgtttttctcacc 16033138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 16546186 - 16546240
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||| ||||||||| |||| |||||||||||||||||    
T  16546186 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttagg 16546240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 16619476 - 16619422
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||| ||||||||| |||| |||||||||||||||||    
T  16619476 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttagg 16619422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21284223 - 21284277
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| | || |||||||||||||| |||| |||||||||||||||||    
T  21284223 acatcacttcagaaatagaactctatctgcttctgatcagtgttttcagcttagg 21284277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 21691733 - 21691679
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||| ||||||||| |||| |||||||||||||||||    
T  21691733 acatcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttagg 21691679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 382 - 427
Target Start/End: Complemental strand, 23818935 - 23818889
Alignment:
Q  382 ggtttttctttagtaatgttttaatgaggcatatcctc-atggacat 427  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  23818935 ggtttttctctagtaatgttttaatgaggcatatcctcgatggacat 23818889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 28623202 - 28623256
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| ||||| |||||||||||    
T  28623202 acatcacttcagaagtagaactctatctgcttctgatcagtgtgttcagcttagg 28623256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 10884095 - 10884136
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaa 135  Q
    |||||||||||||| |||||||||||||||||||| ||||||    
T  10884095 cacaattcaaccccccttcttgtgtttttctcaccttcaaaa 10884136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 13879452 - 13879403
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagc 67  Q
    |||||||||||| |||| |||||||||||||| |||| ||||||||||||    
T  13879452 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagc 13879403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 347 - 419
Target Start/End: Complemental strand, 14997696 - 14997623
Alignment:
Q  347 gtactctttttccttcactagaattttttcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc 419  Q
    ||||||||||||| |||||   ||||||||||||| |||||||  ||||||| |||||||||||| ||||||||    
T  14997696 gtactctttttccctcactgagattttttcccattaggttttttcttagtaaagttttaatgaggtatatcctc 14997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 21382353 - 21382394
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaa 135  Q
    |||||||||||||| |||||||||||||||||||| ||||||    
T  21382353 cacaattcaaccccccttcttgtgtttttctcaccttcaaaa 21382394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 4820794 - 4820746
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcag 66  Q
    |||||||||||  |||| |||||||||||||| ||||||||||||||||    
T  4820794 acatcacttcaaaagtagaactctatctgcttctgattagtgttttcag 4820746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 10884021 - 10884073
Alignment:
Q  20 atcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||| || |||||||||| ||||| |||| |||||||||||||||||    
T  10884021 atcacttcagaagcataactctatttgcttctgatcagtgttttcagcttagg 10884073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 16155591 - 16155643
Alignment:
Q  20 atcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||| |||| || ||||||||||| ||||||||||||||| ||||||    
T  16155591 atcacttcagaagtagaattctatctgcttctgattagtgttttcaacttagg 16155643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 33604137 - 33604097
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaa 134  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  33604137 cacaattcaaccccccttcttgtgtttttctcaccttcaaa 33604097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 41843271 - 41843323
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagctta 70  Q
    |||||||||||| |||| |||||| ||||||| |||| |||||||||||||||    
T  41843271 acatcacttcagaagtagaactctttctgcttctgatcagtgttttcagctta 41843323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 9710683 - 9710738
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtg-ttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||| |||||||||||||    
T  9710683 acatcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttagg 9710738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 16557466 - 16557513
Alignment:
Q  25 ttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    ||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  16557466 ttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 16557513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 16608196 - 16608149
Alignment:
Q  25 ttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    ||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  16608196 ttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 16608149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 18440622 - 18440583
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  18440622 cacaattcaaccccccttcttgtgtttttctcaccttcaa 18440583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 34326200 - 34326304
Alignment:
Q  347 gtactctttttccttcactagaatttttt---cccattggttttt-ctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgt 441  Q
    ||||||||||||||||||| |||||||||   ||| |||| |||| || |||||| ||||||||||||||||||| | ||||| || ||| | |||||||    
T  34326200 gtactctttttccttcact-gaatttttttttcccgttgggttttactctagtaaggttttaatgaggcatatccttaatggatatccaatgaggagtgt 34326298  T
Q  442 tatgaa 447  Q
    ||||||    
T  34326299 tatgaa 34326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 1559968 - 1560002
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  1559968 cacaattcaaccccccttcttgtgtttttctcacc 1560002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 4433465 - 4433499
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  4433465 cacaattcaaccccccttcttgtgtttttctcacc 4433499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 4493777 - 4493743
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  4493777 cacaattcaaccccccttcttgtgtttttctcacc 4493743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 6045155 - 6045189
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  6045155 cacaattcaaccccccttcttgtgtttttctcacc 6045189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 11792103 - 11792069
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  11792103 cacaattcaaccccccttcttgtgtttttctcacc 11792069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 11792179 - 11792125
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| ||| |||||||||| |||| |||||||||| ||||||    
T  11792179 acatcacttcagaagtagaacactatctgcttctgatcagtgttttcaacttagg 11792125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 13259368 - 13259402
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  13259368 cacaattcaaccccccttcttgtgtttttctcacc 13259402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 13261600 - 13261634
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  13261600 cacaattcaaccccccttcttgtgtttttctcacc 13261634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 14186995 - 14186941
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| || ||||||||||| |||| |||||||||||| ||||    
T  14186995 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcctagg 14186941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 14746544 - 14746578
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  14746544 cacaattcaaccccccttcttgtgtttttctcacc 14746578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 15467224 - 15467170
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    ||||||||| || |||  |||||||||||||| |||| |||||||||||||||||    
T  15467224 acatcacttaagaagtggaactctatctgcttctgatcagtgttttcagcttagg 15467170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 16557535 - 16557569
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  16557535 cacaattcaaccccccttcttgtgtttttctcacc 16557569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 16608127 - 16608093
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  16608127 cacaattcaaccccccttcttgtgtttttctcacc 16608093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 17916966 - 17916932
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    ||||||||||||| |||||||||||||||||||||    
T  17916966 cacaattcaacccatcttcttgtgtttttctcacc 17916932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 21284299 - 21284333
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  21284299 cacaattcaaccccccttcttgtgtttttctcacc 21284333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 22580103 - 22580157
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||| ||||| |||| |||| |||||||||||||| |||||||||||| ||||    
T  22580103 acatcagttcagaagtagaactttatctgcttttgatcagtgttttcagcatagg 22580157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 23125194 - 23125156
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatca 132  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  23125194 cacaattcaaccctccttcttgtgtttttctcaccatca 23125156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 24883268 - 24883302
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  24883268 cacaattcaaccccccttcttgtgtttttctcacc 24883302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 349 - 447
Target Start/End: Complemental strand, 26457099 - 26456999
Alignment:
Q  349 actctttttccttcactagaattttttcccatt--ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttatg 445  Q
    |||||||||| |||||||||||||||| |||||  | ||||||| || ||| ||||||||||  ||||||||| |||||||| |||||  || |||||||    
T  26457099 actctttttc-ttcactagaattttttaccattgagttttttctctaataaggttttaatgaatcatatcctcgatggacatccaaggaagaatgttatg 26457001  T
Q  446 aa 447  Q
    ||    
T  26457000 aa 26456999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 48806808 - 48806842
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  48806808 cacaattcaaccccccttcttgtgtttttctcacc 48806842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 11318628 - 11318587
Alignment:
Q  94 cacaattcaacccctc-ttcttgtgtttttctcaccatcaaa 134  Q
    |||||||||||||||| ||||||||||||||||||| |||||    
T  11318628 cacaattcaacccctccttcttgtgtttttctcaccttcaaa 11318587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 13138774 - 13138823
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagc 67  Q
    |||||||||||| |||| |||||||||||||| |||| | ||||||||||    
T  13138774 acatcacttcagaagtagaactctatctgcttctgatcaatgttttcagc 13138823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 15087862 - 15087809
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgat-tagtgttttcagctta 70  Q
    |||||||||||| |||| |||||||||||||| ||||  |||||||||||||||    
T  15087862 acatcacttcagaagtagaactctatctgcttctgatcaagtgttttcagctta 15087809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 16315383 - 16315440
Alignment:
Q  15 tggacatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||| |||||||||| || | |||||||| ||||| |||| |||||||||||||||||    
T  16315383 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttagg 16315440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 48237687 - 48237736
Alignment:
Q  21 tcacttcaggagtataactctatctgcttttgattagtgttttcagctta 70  Q
    ||||||||| |||| |||||||||| ||| |||| |||||||||||||||    
T  48237687 tcacttcagaagtagaactctatctacttctgatcagtgttttcagctta 48237736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 6e-76; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 132 - 340
Target Start/End: Complemental strand, 40877164 - 40876956
Alignment:
Q  132 aaaaattagtgtttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattctacgatcaaagttt 231  Q
    |||||||||||||||||||| |||||||||||||| ||||| | |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  40877164 aaaaattagtgtttgatcaaagattttcttgatacgatcatgtctctattatatggattgaaacgtgcaatattgtttccttattctatgatcaaagttt 40877065  T
Q  232 ggttatgattttcttctttcttattgcataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaacat 331  Q
    |||||| ||||||||||||| ||||||||| ||||||| ||||  ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||    
T  40877064 ggttataattttcttctttcctattgcatatgacttctagaaggtctgaattacaaggtaagtaagcacaaactcttttctacataattcttgaaaacat 40876965  T
Q  332 cttttatga 340  Q
    ||| |||||    
T  40876964 cttatatga 40876956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 30714470 - 30714369
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttt-tctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtt 442  Q
    |||||||||||||||||||||||||||| ||| ||| |||||| ||| |||||| ||||||||||||||||||||| |||||||| ||||||||||||||    
T  30714470 gtactctttttccttcactagaatttttctcctattaggttttctctatagtaaggttttaatgaggcatatcctcaatggacatccaagggggagtgtt 30714371  T
Q  443 at 444  Q
    ||    
T  30714370 at 30714369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 30722247 - 30722146
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttt-tctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtt 442  Q
    |||||||||||||||||||||||||||| ||| ||| |||||| ||| |||||| ||||||||||||||||||||| |||||||| ||||||||||||||    
T  30722247 gtactctttttccttcactagaatttttctcctattaggttttctctatagtaaggttttaatgaggcatatcctcaatggacatccaagggggagtgtt 30722148  T
Q  443 at 444  Q
    ||    
T  30722147 at 30722146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 585 - 681
Target Start/End: Original strand, 10739135 - 10739231
Alignment:
Q  585 tgtaaagatacatttgtgaagagaacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgtttttcctttatttcttaacat 681  Q
    |||||||||| | |||||||||||| |||| |||||| ||||||||||||| | ||| | ||||||||||||||| |||| ||||||||||||||||    
T  10739135 tgtaaagatatacttgtgaagagaataatacaaagtgctttcatcttctccattctcttcttctttgatcttgtgcttttactttatttcttaacat 10739231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 37209616 - 37209717
Alignment:
Q  347 gtactctttttccttcactagaa--ttttttccca-ttggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtt 442  Q
    |||||||||||||||||||||||  ||||||||||   ||||||  |||||||| ||||||||||||||||||||| |||||||| ||||||||||||||    
T  37209616 gtactctttttccttcactagaattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgtt 37209715  T
Q  443 at 444  Q
    ||    
T  37209716 at 37209717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 10738872 - 10738976
Alignment:
Q  347 gtactctttttccttcactagaa--ttttttcccattgg-tttttctttagtaatgttttaatgaggcatatcct-catggacattcaagggggagtgtt 442  Q
    |||||||||||||||||||| |   |||||| ||||||| ||||||| || ||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  10738872 gtactctttttccttcactatatattttttttccattgggtttttctctaataaggttttaatgaggcacatccttcatggacattcaagggggagtgtt 10738971  T
Q  443 atgaa 447  Q
    |||||    
T  10738972 atgaa 10738976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 350 - 447
Target Start/End: Original strand, 17909654 - 17909754
Alignment:
Q  350 ctctttttccttcactagaa-ttttttcccatt-ggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttatga 446  Q
    |||||||||||||||||||| ||||||  |||| ||||||||| |||||| |||||||||||||| |||| |||||||||| ||||| ||||||||||||    
T  17909654 ctctttttccttcactagaatttttttttcattgggtttttctctagtaaggttttaatgaggcacatccttcatggacatccaaggaggagtgttatga 17909753  T
Q  447 a 447  Q
    |    
T  17909754 a 17909754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 21247581 - 21247681
Alignment:
Q  347 gtactctttttccttcactagaatttttt-cccattggtttttcttt-agtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||| |||||| ||||  || |||| ||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  21247581 gtactctttttccttcactagattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgtta 21247680  T
Q  444 t 444  Q
    |    
T  21247681 t 21247681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 27679878 - 27679778
Alignment:
Q  347 gtactctttttccttcactagaatttttt-cccattggtttttcttt-agtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||| |||||| ||||  || |||| ||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  27679878 gtactctttttccttcactagattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgtta 27679779  T
Q  444 t 444  Q
    |    
T  27679778 t 27679778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 680
Target Start/End: Original strand, 10734076 - 10734194
Alignment:
Q  562 tataaataggactcatattgtattgtaaagatacatttgtgaagagaacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgtt 661  Q
    ||||||||||||  | |||||  |||||||||| | |||||||||||| |||| |||||||||||||||||| | | ||| | || ||||||||||||      
T  10734076 tataaataggacctacattgtcatgtaaagatatacttgtgaagagaataatacaaagtgttttcatcttcttcattctctttttgtttgatcttgtgca 10734175  T
Q  662 tttcctttatttcttaaca 680  Q
    ||| |||||||||||||||    
T  10734176 tttactttatttcttaaca 10734194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 23429437 - 23429541
Alignment:
Q  347 gtactctttttccttcactagaatttttt--cccattggttttt-ctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtt 442  Q
    |||||||||||||||||||  ||||||||  |||||||| |||| || |||||| |||||||||||| |||||||  |||||||| ||||||||||||||    
T  23429437 gtactctttttccttcactgtaattttttttcccattgggttttactctagtaaggttttaatgagggatatccttgatggacatccaagggggagtgtt 23429536  T
Q  443 atgaa 447  Q
    |||||    
T  23429537 atgaa 23429541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 17796721 - 17796667
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  17796721 acatcacttcagaagtataactctatctgcttctgatcagtgttttcagcttagg 17796667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 26196801 - 26196901
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccattggttttt-ctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||  |||||  |||| ||||||||  |||||||| || |||||||| ||||||||| ||||||||||||||||| ||||||    
T  26196801 gtactctttttccttcactagtttttttcccccactggtttttattttagtaaggtcttaatgagacatatcctcaatggacattcaagggggggtgtta 26196900  T
Q  444 t 444  Q
    |    
T  26196901 t 26196901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 585 - 680
Target Start/End: Original strand, 15007176 - 15007270
Alignment:
Q  585 tgtaaagatacatttgtgaagagaacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgtttttcctttatttcttaaca 680  Q
    |||||||| ||| | |||||||||  |||| |||||| ||||||||||||||||||| | |||||||||| |||| |||| ||||||||| |||||    
T  15007176 tgtaaagacacactggtgaagagat-aatacaaagtgctttcatcttctccttcctcatcttctttgatcctgtgcttttactttatttcataaca 15007270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 562 - 680
Target Start/End: Original strand, 17909897 - 17910016
Alignment:
Q  562 tataaataggactcatattgtattgtaaagat-acatttgtgaagagaacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgt 660  Q
    ||||||||||||| ||||   | ||||||||  ||| ||| |||||||| |||| |||||  ||||||||||||||||||| | || ||||||||||||     
T  17909897 tataaataggacttatatctcaatgtaaagaacacacttgagaagagaataatacaaagtactttcatcttctccttcctcatcttttttgatcttgtgc 17909996  T
Q  661 ttttcctttatttcttaaca 680  Q
    |||| |||||||| ||||||    
T  17909997 ttttactttattttttaaca 17910016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 601 - 680
Target Start/End: Complemental strand, 36911973 - 36911894
Alignment:
Q  601 tgaagagaacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgtttttcctttatttcttaaca 680  Q
    ||||||||| |||| |||||||||||| ||||| ||||||| | ||||||||||||||| ||||  |||||||| |||||    
T  36911973 tgaagagaataataaaaagtgttttcaccttcttcttcctcttcttctttgatcttgtgcttttagtttatttcataaca 36911894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 367 - 447
Target Start/End: Complemental strand, 12756396 - 12756314
Alignment:
Q  367 gaattttttcccattgg-tttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttatgaa 447  Q
    ||||||||||||| ||| ||||||| |||||| ||||||||||| |||||||   |||||||| |||||||||||||||||||    
T  12756396 gaattttttcccactgggtttttctctagtaaggttttaatgagacatatccgagatggacatccaagggggagtgttatgaa 12756314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 16206535 - 16206481
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  16206535 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 16206481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 31445406 - 31445352
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  31445406 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 31445352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 45539331 - 45539385
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  45539331 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 45539385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 9319876 - 9319823
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttag 71  Q
    |||||||||||| |||| |||||||||||||| |||| ||||||||||||||||    
T  9319876 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttag 9319823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 40213994 - 40214041
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaaattagt 141  Q
    |||||||||||||| |||||||||||||||||||| ||| ||||||||    
T  40213994 cacaattcaaccccccttcttgtgtttttctcaccttcacaaattagt 40214041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 41048764 - 41048866
Alignment:
Q  347 gtactctttttccttcactagaa-ttttttccca-ttggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgtta 443  Q
    ||||||||||||||||||| ||| |||||||||| | ||||||||| |||||| |||||||| ||||||||||   |||| ||| ||||||| |||||||    
T  41048764 gtactctttttccttcactggaatttttttcccactgggtttttctctagtaaggttttaat-aggcatatccgagatgggcatccaaggggaagtgtta 41048862  T
Q  444 tgaa 447  Q
    ||||    
T  41048863 tgaa 41048866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 30422277 - 30422331
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||| ||||| |||| |||||||||||||||||    
T  30422277 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttagg 30422331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 30422353 - 30422387
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||||||||||||||||||||||||    
T  30422353 cacaattcaacccctcttcttgtgtttttctcacc 30422387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 19153331 - 19153274
Alignment:
Q  15 tggacatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||| |||||||||| || |||||||||| ||||| |||| |||||||||||||||||    
T  19153331 tggaaatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttagg 19153274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 23185593 - 23185646
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttag 71  Q
    ||||| |||||| |||| |||||||||||||| |||| ||||||||||||||||    
T  23185593 acatcgcttcagaagtagaactctatctgcttctgatcagtgttttcagcttag 23185646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 43773346 - 43773305
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaa 135  Q
    |||||||||||||| |||||||||||||||||||| ||||||    
T  43773346 cacaattcaaccccccttcttgtgtttttctcaccttcaaaa 43773305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 16376251 - 16376291
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaa 134  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  16376251 cacaattcaaccccccttcttgtgtttttctcaccttcaaa 16376291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 18565204 - 18565164
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaa 134  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  18565204 cacaattcaaccccccttcttgtgtttttctcaccttcaaa 18565164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 1210623 - 1210662
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  1210623 cacaattcaaccccccttcttgtgtttttctcaccttcaa 1210662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 17007538 - 17007499
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  17007538 cacaattcaaccccccttcttgtgtttttctcaccttcaa 17007499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 17287086 - 17287125
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  17287086 cacaattcaaccccccttcttgtgtttttctcaccttcaa 17287125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 17541412 - 17541451
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  17541412 cacaattcaaccccccttcttgtgtttttctcaccttcaa 17541451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 18676885 - 18676846
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  18676885 cacaattcaaccccccttcttgtgtttttctcaccttcaa 18676846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 6406989 - 6406951
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatca 132  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  6406989 cacaattcaacccccattcttgtgtttttctcaccatca 6406951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 13431541 - 13431575
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  13431541 cacaattcaaccccccttcttgtgtttttctcacc 13431575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 19942539 - 19942486
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||| ||||||  ||||||||||||||||    
T  19942539 acatcacttcagaagtagaactctatctgc-tttgatcggtgttttcagcttagg 19942486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 20383197 - 20383251
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| || |||||| ||| ||||| ||||||||||||||| ||||||    
T  20383197 acatcacttcagaagcataactttatttgcttctgattagtgttttcaacttagg 20383251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 23264474 - 23264528
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| || ||||||| ||| |||| |||||||||||||||||    
T  23264474 acatcacttcagaagtagaattctatctacttctgatcagtgttttcagcttagg 23264528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 45539407 - 45539441
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  45539407 cacaattcaaccccccttcttgtgtttttctcacc 45539441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 446
Target Start/End: Complemental strand, 16845954 - 16845853
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattg-gtttttctttagtaatgttttaatgaggcatatc-ctcatggacattcaagggggagtgttat 444  Q
    ||||||||||| |||||||| |||| ||| ||||||  ||||||| ||| || ||||||||||| ||||||  | |||||||| |||||  |||||||||    
T  16845954 gtactcttttttcttcactataattattttccattgaatttttctctagaaaggttttaatgagacatatctttgatggacatccaaggaagagtgttat 16845855  T
Q  445 ga 446  Q
    ||    
T  16845854 ga 16845853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 17442694 - 17442743
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagc 67  Q
    |||||||||||| |||| |||||||| ||||| |||| ||||||||||||    
T  17442694 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagc 17442743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 18121980 - 18122029
Alignment:
Q  19 catcacttcaggagtataactctatctgcttttgattagtgttttcagct 68  Q
    ||||||||||| |||| |||||||||||||| |||| | |||||||||||    
T  18121980 catcacttcagaagtagaactctatctgcttctgatcaatgttttcagct 18122029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 26735805 - 26735846
Alignment:
Q  94 cacaattcaacccc-tcttcttgtgtttttctcaccatcaaa 134  Q
    |||||||||||||| ||||||||||||||||||||| |||||    
T  26735805 cacaattcaaccccctcttcttgtgtttttctcaccttcaaa 26735846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 2e-73; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 143 - 347
Target Start/End: Original strand, 21147538 - 21147742
Alignment:
Q  143 tttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattctacgatcaaagtttggttatgattt 242  Q
    ||||||||| |||| | ||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||    
T  21147538 tttgatcaaagattatattgatacgatcatatttctattatatggattgaaacatgcaatattgtttccttattctacaatcaaagtttggttatgaatt 21147637  T
Q  243 tcttctttcttattgcataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactcttttctacataactcttgaaaacatcttttatgaat 342  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||  ||||||    
T  21147638 tcttctttcttaatgcataagacttctagaaggcctgaataacaaagtaagcaagcacaaactcttttctacataactcttgaaaacatcttcaatgaat 21147737  T
Q  343 tgacg 347  Q
    |||||    
T  21147738 tgacg 21147742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 348 - 447
Target Start/End: Complemental strand, 17270442 - 17270340
Alignment:
Q  348 tactctttttccttcactagaatttttt-cccattg-gtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    |||||||||||||||| |||| |||||| ||||| | |||||||| |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  17270442 tactctttttccttcattagattttttttcccatcgcgtttttctctagtaaggttttaatgaggcatatccttcatggacatccaagggggagtgttat 17270343  T
Q  445 gaa 447  Q
    |||    
T  17270342 gaa 17270340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 23427387 - 23427487
Alignment:
Q  347 gtactctttttccttcactagaatttttt-cccattggtttttcttt-agtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||| |||||| ||||  || |||| ||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  23427387 gtactctttttccttcactagattttttttcccacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgtta 23427486  T
Q  444 t 444  Q
    |    
T  23427487 t 23427487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 351 - 447
Target Start/End: Original strand, 25397825 - 25397921
Alignment:
Q  351 tctttttccttcactagaattttttcccattgg-tttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttatgaa 447  Q
    |||||||||||||||||| |||||| ||||||| ||||||  |||||| ||||||||||||||||||| | ||||||||||  ||||||||||||||||    
T  25397825 tctttttccttcactagattttttttccattggatttttcactagtaaggttttaatgaggcatatccttgatggacattc--gggggagtgttatgaa 25397921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 14855841 - 14855944
Alignment:
Q  347 gtactctttttccttcactagaatttttt-cccattgg-tttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgtta 443  Q
    ||||||||||||||||| |  |||||||| |||| ||| ||||||| |||||| |||||||||||||||||||   |||||||| |||||||||||||||    
T  14855841 gtactctttttccttcattgaaatttttttcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgtta 14855940  T
Q  444 tgaa 447  Q
    ||||    
T  14855941 tgaa 14855944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 19816826 - 19816727
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattgg-tttttctttagtaatgttttaatgaggcatatcctca-tggacattcaagggggagtgttat 444  Q
    ||||||||||||||| |||||||||||||  || ||| ||||| |||||||| |||||||| ||||||||||||| ||||||| ||| ||| ||||||||    
T  19816826 gtactctttttccttaactagaattttttttcactggctttttttttagtaaggttttaataaggcatatcctcagtggacatccaaagggtagtgttat 19816727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 384 - 447
Target Start/End: Complemental strand, 19441382 - 19441318
Alignment:
Q  384 tttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttatgaa 447  Q
    ||||||| |||||| |||||||||||||||||| || |||||||| |||||||||||||||||||    
T  19441382 tttttctctagtaaggttttaatgaggcatatcatcaatggacatccaagggggagtgttatgaa 19441318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 6932945 - 6933015
Alignment:
Q  347 gtactctttttccttcactagaattttttcccatt-ggtttttctttagtaatgttttaatgaggcatatc 416  Q
    |||||||||||| ||||||| ||||||||| |||| ||||||| | |||||| ||||||||||||||||||    
T  6932945 gtactctttttcattcactataattttttctcattgggtttttatctagtaaggttttaatgaggcatatc 6933015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 10631446 - 10631392
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  10631446 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 10631392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 13435194 - 13435140
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  13435194 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 13435140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 21624401 - 21624347
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  21624401 acatcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcttagg 21624347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 20731546 - 20731599
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttag 71  Q
    |||||||||||| |||| |||||||||||||| |||| ||||||||||||||||    
T  20731546 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttag 20731599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 592 - 680
Target Start/End: Complemental strand, 23599988 - 23599900
Alignment:
Q  592 atacatttgtgaagagaacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgtttttcctttatttcttaaca 680  Q
    ||||| || ||||||||| |||| ||| || ||||||||||| |||| || | ||||||||||||||| ||||  ||||||||||||||    
T  23599988 atacacttatgaagagaataatacaaaatgctttcatcttcttcttcatcttcttctttgatcttgtgcttttagtttatttcttaaca 23599900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 24717659 - 24717711
Alignment:
Q  20 atcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  24717659 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 24717711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 18434819 - 18434768
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagctt 69  Q
    |||||||||||| |||| |||||||||||||| |||||||||||| ||||||    
T  18434819 acatcacttcagaagtagaactctatctgcttctgattagtgtttccagctt 18434768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 9717135 - 9717081
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||  ||||||||||||||||||| |||||||||| ||||||    
T  9717135 acatcacttcagaagtggaactctatctgcttttgatcagtgttttcaacttagg 9717081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 12352970 - 12352928
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaaa 136  Q
    |||||||||||||| |||||||||||||||||||| |||||||    
T  12352970 cacaattcaaccccccttcttgtgtttttctcaccttcaaaaa 12352928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 17380872 - 17380818
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||| ||||| |||| |||||||||||||||||    
T  17380872 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttagg 17380818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 21234465 - 21234411
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| || ||||||||||| |||| |||||||||||||||||    
T  21234465 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttagg 21234411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 18377736 - 18377684
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagctta 70  Q
    |||||||||||| |||| ||||||||||| ||||||| ||| |||||||||||    
T  18377736 acatcacttcagaagtagaactctatctgtttttgatcagtattttcagctta 18377684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 7752043 - 7752082
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  7752043 cacaattcaaccccccttcttgtgtttttctcaccttcaa 7752082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 17926985 - 17926946
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||| |||||||||||||||||||||||||||||| ||||    
T  17926985 cacagttcaacccctcttcttgtgtttttctcaccttcaa 17926946  T

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Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 20113473 - 20113528
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgat-tagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| ||||  |||||||||||||||||    
T  20113473 acatcacttcagaagtagaactctatctgcttctgatcaagtgttttcagcttagg 20113528  T

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Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 28252368 - 28252407
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  28252368 cacaattcaaccccccttcttgtgtttttctcaccttcaa 28252407  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 12041091 - 12041057
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||| ||||||||||||||||||||||    
T  12041091 cacaattcaaccactcttcttgtgtttttctcacc 12041057  T

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Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 14101284 - 14101338
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||  |||| |||||||||||||| |||| ||| |||||||||||||    
T  14101284 acatcacttcataagtagaactctatctgcttctgatcagtattttcagcttagg 14101338  T

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Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 15301451 - 15301417
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  15301451 cacaattcaaccccccttcttgtgtttttctcacc 15301417  T

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Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 15532470 - 15532524
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||| ||||  |||| |||||||||||||||||    
T  15532470 acatcacttcagaagtagaactctatttgctcctgatcagtgttttcagcttagg 15532524  T

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Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 15551273 - 15551239
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  15551273 cacaattcaaccccccttcttgtgtttttctcacc 15551239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 16124338 - 16124372
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  16124338 cacaattcaaccccccttcttgtgtttttctcacc 16124372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 19453472 - 19453506
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  19453472 cacaattcaaccccccttcttgtgtttttctcacc 19453506  T

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Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 19833904 - 19833938
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  19833904 cacaattcaaccccccttcttgtgtttttctcacc 19833938  T

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Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 19952434 - 19952480
Alignment:
Q  26 tcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||| |||| |||||||||||||| |||||||| |||||||||||||    
T  19952434 tcagaagtagaactctatctgcttctgattagtattttcagcttagg 19952480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 22801452 - 22801398
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||| | ||||||||    
T  22801452 acatcacttcagaagtagaactctatctgcttctgatcagtgttattagcttagg 22801398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 24471280 - 24471314
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||| ||||||||||||||||||||||    
T  24471280 cacaattcaaccactcttcttgtgtttttctcacc 24471314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 30451903 - 30451937
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  30451903 cacaattcaaccccccttcttgtgtttttctcacc 30451937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 32543572 - 32543518
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||  |||||||||||||| |||| ||||||||||| |||||    
T  32543572 acatcacttcagaagtggaactctatctgcttctgatcagtgttttcaggttagg 32543518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 32756794 - 32756760
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  32756794 cacaattcaaccccccttcttgtgtttttctcacc 32756760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 33866536 - 33866502
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  33866536 cacaattcaaccccccttcttgtgtttttctcacc 33866502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 13601479 - 13601422
Alignment:
Q  15 tggacatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||| |||||||||| || | |||||||| ||||| |||| |||||||||||||||||    
T  13601479 tggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttagg 13601422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 21034274 - 21034233
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaa 135  Q
    ||||||||||||||  ||||||||||||||||||| ||||||    
T  21034274 cacaattcaacccccgttcttgtgtttttctcaccttcaaaa 21034233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 22385999 - 22385962
Alignment:
Q  96 caattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  22385999 caattcaaccccccttcttgtgtttttctcaccttcaa 22385962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 25593383 - 25593326
Alignment:
Q  15 tggacatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||| |||||||||  || |||||||||| ||||| |||| |||||||||||||||||    
T  25593383 tggaaatcacttcataagcataactctatttgcttctgatcagtgttttcagcttagg 25593326  T

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Target: chr5 (Bit Score: 113; Significance: 8e-57; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 134 - 310
Target Start/End: Complemental strand, 18086010 - 18085834
Alignment:
Q  134 aaattagtgtttgatcaatgattttcttgatactatcatatttctattatatcgattgaaacgtgcaatattgtttccttattctacgatcaaagtttgg 233  Q
    |||||| ||||||||||| ||||||||||| || ||||| | |||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  18086010 aaattattgtttgatcaaagattttcttgacacgatcatgtctctattatatggattgaaacgtgcaatattatttccttattctatgatcaaagtttgg 18085911  T
Q  234 ttatgattttcttctttcttattgcataagacttcttgaagtcctgaattacaaggtaagcaaacacaaactctttt 310  Q
    |||| |||||||||||| |||||||||| ||||||||||||  ||||||||||||||||| || |||||||||||||    
T  18085910 ttataattttcttcttttttattgcatatgacttcttgaaggtctgaattacaaggtaagtaagcacaaactctttt 18085834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 479 - 673
Target Start/End: Complemental strand, 19780119 - 19779927
Alignment:
Q  479 accttcctataaccccaattagtaagtgaatagttggtggaccttaatttccttgatcacacttacttacttatcttgtgtattataaataggactcata 578  Q
    ||||||||||||| |  |||||||||||||||||| ||||||||||||| |||||||||| |  |||||||  ||||||||| |||||||||| ||||||    
T  19780119 accttcctataactctcattagtaagtgaatagttagtggaccttaattaccttgatcactc--acttactcgtcttgtgtactataaatagggctcata 19780022  T
Q  579 ttgtattgtaaagatacatttgtgaagagaacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgtttttcctttattt 673  Q
    |||||||  ||||| ||| |  ||||||||| |||| |||||| ||| |||||||| |||||| | ||||||||||||||| |||| ||||||||    
T  19780021 ttgtattacaaagacacactcttgaagagaataatacaaagtgcttttatcttctcattcctcttcttctttgatcttgtgcttttactttattt 19779927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 478 - 638
Target Start/End: Complemental strand, 19479611 - 19479453
Alignment:
Q  478 caccttcctataaccccaattagtaagtgaatagttggtggaccttaatttccttgatcacacttacttacttatcttgtgtattataaataggactcat 577  Q
    |||||||||||||| |  |||||||||||||||||| ||||||||||||| |||||||||| |   |||||| |||||||||| |||||||||| || ||    
T  19479611 caccttcctataactctcattagtaagtgaatagttagtggaccttaattgccttgatcactcg--cttactcatcttgtgtactataaatagggcttat 19479514  T
Q  578 attgtattgtaaagatacatttgtgaagagaacaatagaaagtgttttcatcttctccttc 638  Q
    ||||||||||||||| ||| || | ||||||| |||| |||||  ||||||||||| ||||    
T  19479513 attgtattgtaaagacacacttataaagagaataatacaaagttctttcatcttcttcttc 19479453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 351 - 583
Target Start/End: Original strand, 17604582 - 17604823
Alignment:
Q  351 tctttttccttcactagaattttttcccatt--ggtttttctttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttatgaaa 448  Q
    ||||||||||||||||||||||||| |||||  | ||||| | |||||| |||||||||||||||||| |  ||||||| ||| |||||||||||||||     
T  17604582 tctttttccttcactagaatttttttccattcagttttttttctagtaaagttttaatgaggcatatcatgttggacatgcaaaggggagtgttatgaat 17604681  T
Q  449 taaagac-ttagtggatatccatcct---tctt-caccttcctataaccccaattagtaagtga----atagttggtggaccttaatttccttgatcaca 539  Q
     || ||| ||||||||| ||||||||   |||| ||||||||||||||||| |||||| |||||    |||||| |||||||||||||   |||||  ||    
T  17604682 aaatgactttagtggatgtccatccttagtcttccaccttcctataacccccattagtgagtgaatatatagttagtggaccttaattattttgat--ca 17604779  T
Q  540 cttacttacttatcttgtgtattataaataggactcatattgta 583  Q
    || |  || | || |||| | |||||||||||||||||||||||    
T  17604780 ctcagctattcattttgtatcttataaataggactcatattgta 17604823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 16675469 - 16675569
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  16675469 gtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcctcaatggacatccaagggggagtgtta 16675568  T
Q  444 t 444  Q
    |    
T  16675569 t 16675569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 21171441 - 21171341
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  21171441 gtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcctcaatggacatccaagggggagtgtta 21171342  T
Q  444 t 444  Q
    |    
T  21171341 t 21171341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 35264794 - 35264694
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| | ||||| ||||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  35264794 gtactctttttccttcactagaatttttcttccattaggtttttctctagtaaggttttaatgaggcatatcctcaatggacatccaagggggagtgtta 35264695  T
Q  444 t 444  Q
    |    
T  35264694 t 35264694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 479 - 673
Target Start/End: Complemental strand, 19783366 - 19783175
Alignment:
Q  479 accttcctataaccccaattagtaagtgaatagttggtggaccttaatttccttgatcacacttacttacttatcttgtgtattataaataggactcata 578  Q
    ||||||||||||| |  |||||||||||||||||| ||||| ||||||| | || ||||| |  ||||||| |||||||||| |||||||||  ||||||    
T  19783366 accttcctataactctcattagtaagtgaatagttagtggaacttaattgctttcatcactc--acttactcatcttgtgtactataaatagtgctcata 19783269  T
Q  579 ttgtattgtaaagatacatttgtgaagagaacaatagaaagtgttttcatcttctccttcctcctgttctttgatcttgtgtttttcctttattt 673  Q
    |||||| | ||||| ||| |  ||||||||| |||| |||||| ||| ||||||||||| ||| | || ||||||||| || |||| ||||||||    
T  19783268 ttgtat-gcaaagacacactcttgaagagaataatacaaagtgcttttatcttctcctttctcttcttttttgatcttatgcttttactttattt 19783175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 28367235 - 28367133
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| |||||| |||||||||||||||||||   |||||||| ||||||||||||||||    
T  28367235 gtactctttttccttcactggaattttttcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 28367136  T
Q  445 gaa 447  Q
    |||    
T  28367135 gaa 28367133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 439 - 629
Target Start/End: Complemental strand, 16633463 - 16633272
Alignment:
Q  439 tgttatgaaataaagacttagtggatatccatcctt---cttc-accttcctataaccccaattagtaagtgaatagttggtggaccttaatttccttga 534  Q
    |||||||||  || |||||||||||| |||||||||   |||| ||||||||||||||||| ||||  ||||||||||| ||||||||||||| | ||||    
T  16633463 tgttatgaataaatgacttagtggatgtccatccttagtcttccaccttcctataacccca-ttagcgagtgaatagttagtggaccttaattactttga 16633365  T
Q  535 tcacacttacttacttatcttgtgtattataaataggactcatattgtattgtaaagatacatttgtgaagagaacaatagaaagtgttttcatc 629  Q
    |||  |  ||||||| | |||||||  |||||||||| |||||||||||||| ||||| ||  |||||||||||| |||| |||  |||||||||    
T  16633364 tcattc--acttactcaacttgtgtcctataaatagggctcatattgtattgcaaagacacgcttgtgaagagaataatataaaaggttttcatc 16633272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 19780234 - 19780153
Alignment:
Q  393 agtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttatgaaataaagacttagtggatatccatcctt 474  Q
    ||||| |||||||||||||||||||  |||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||    
T  19780234 agtaaagttttaatgaggcatatcccgatggacatccaagggggagtgttatgaaataatgacttagttgatgtccatcctt 19780153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 17945653 - 17945756
Alignment:
Q  347 gtactctttttccttcactaga-attttttcccattg-gtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgtta 443  Q
    ||||||||||||||||||||||  |||||| |||||| |||||||| |||||| |||||||||||||| |||| |||||||||| ||||| |||||||||    
T  17945653 gtactctttttccttcactagatttttttttccattgagtttttctctagtaaggttttaatgaggcacatccttcatggacatccaaggaggagtgtta 17945752  T
Q  444 tgaa 447  Q
    ||||    
T  17945753 tgaa 17945756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 347 - 443
Target Start/End: Complemental strand, 24213570 - 24213471
Alignment:
Q  347 gtactctttttccttcactagaatt-ttttcccat-tggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    ||||||||||||||||||||||||| |||||||||  || |||||| |||||| ||||||||||||||||||||| || ||||| |||||||||||||||    
T  24213570 gtactctttttccttcactagaatttttttcccatcgggattttctctagtaaggttttaatgaggcatatcctcgatagacatccaagggggagtgtta 24213471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 30957851 - 30957749
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| | |||| || ||||||||||||||||   |||||||| ||||||||||||||||    
T  30957851 gtactctttttccttcactggaattttttcccactgggtttttctctcgtaaggtattaatgaggcatatccgagatggacatccaagggggagtgttat 30957752  T
Q  445 gaa 447  Q
    |||    
T  30957751 gaa 30957749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 23053626 - 23053533
Alignment:
Q  354 ttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||||| ||| ||| ||||||||| |||||| |||||||||||||||||| || |||||||| ||||||||||||||||    
T  23053626 ttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcttcaatggacatccaagggggagtgttat 23053533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 351 - 447
Target Start/End: Original strand, 19699251 - 19699351
Alignment:
Q  351 tctttttccttcactagaattttttc--ccattgg-tttttctttagtaatgttttaatgaggcatatcct-catggacattcaagggggagtgttatga 446  Q
    |||||||||||  ||||||||||||   ||||||| ||||||| |||||| |||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  19699251 tctttttcctttgctagaatttttttttccattgggtttttctctagtaaggttttaatgaggcacatccttcatggacattcaagggggactgttatga 19699350  T
Q  447 a 447  Q
    |    
T  19699351 a 19699351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 347 - 444
Target Start/End: Complemental strand, 25365648 - 25365548
Alignment:
Q  347 gtactctttttccttcactagaattttttcc-cattggtttttcttt-agtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||| |||||| | ||  || |||| ||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  25365648 gtactctttttccttcactagattttttttcgcacggggttttattttagtaaggttttaatgaggcatatcctcgatggacatccaagggggagtgtta 25365549  T
Q  444 t 444  Q
    |    
T  25365548 t 25365548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 346 - 447
Target Start/End: Complemental strand, 34648185 - 34648082
Alignment:
Q  346 cgtactctttttccttcactagaattttttcccattgg-tttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgtta 443  Q
    ||||| |||||||||||| || | |||||| ||||||| ||||||| ||| || ||||||||||||||||||| | |||||||| |||||||||| ||||    
T  34648185 cgtaccctttttccttcaataaattttttttccattgggtttttctctagaaaggttttaatgaggcatatccttgatggacatccaagggggagagtta 34648086  T
Q  444 tgaa 447  Q
    ||||    
T  34648085 tgaa 34648082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 382 - 464
Target Start/End: Complemental strand, 19479734 - 19479652
Alignment:
Q  382 ggtttttctttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttatgaaataaagacttagtggat 464  Q
    ||||||| | |||||| |||||| ||||||||||||| |||||||| ||||| | ||||||||||||||| ||||| ||||||    
T  19479734 ggtttttttctagtaaggttttagtgaggcatatcctgatggacatccaaggagaagtgttatgaaataatgactttgtggat 19479652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 7746524 - 7746578
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  7746524 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagg 7746578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 31117184 - 31117130
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| ||||||||||| ||||||| |||||||||||||||||    
T  31117184 acatcacttcagaagtagaactctatctggttttgatcagtgttttcagcttagg 31117130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 23880321 - 23880269
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagctta 70  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||    
T  23880321 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcagctta 23880269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 9399440 - 9399495
Alignment:
Q  17 gacatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    ||||||||||||| | || || ||||||||||| ||||||||||||||||||||||    
T  9399440 gacatcacttcagaaatagaattctatctgcttctgattagtgttttcagcttagg 9399495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 18080208 - 18080103
Alignment:
Q  347 gtactctttttccttcactagaatttttt---cccattggttttt-ctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgt 441  Q
    ||||||||||||||||| | |||||||||   ||| |||| |||| || |||||| ||||||||||||||||||| | |||||||| |||||| || |||    
T  18080208 gtactctttttccttcattggaatttttttttcccgttgggttttactctagtaaggttttaatgaggcatatccttgatggacatccaagggagaatgt 18080109  T
Q  442 tatgaa 447  Q
    ||||||    
T  18080108 tatgaa 18080103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 6498623 - 6498569
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| | || |||||||||||||||||    
T  6498623 acatcacttcagaagtagaactctatctgcttctaatcagtgttttcagcttagg 6498569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 33021968 - 33021914
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||| | |||| |||||||||||||| |||| |||||||||||||||||    
T  33021968 acatcacttcggaagtagaactctatctgcttctgatcagtgttttcagcttagg 33021914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 13546355 - 13546408
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttag 71  Q
    |||||||||||| |||| |||||||||||||| |||| | ||||||||||||||    
T  13546355 acatcacttcagaagtagaactctatctgcttctgatcattgttttcagcttag 13546408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 19642726 - 19642766
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaa 134  Q
    ||||||||| ||||||||||||||||||||||||| |||||    
T  19642726 cacaattcatcccctcttcttgtgtttttctcaccttcaaa 19642766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 494
Target Start/End: Complemental strand, 21575152 - 21575047
Alignment:
Q  393 agtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttatgaaataaaga-cttagtggatatccatcct---tctt-caccttccta 487  Q
    ||||| ||||||| || ||||||| | |||||||| ||| |||||||||||| ||||||| | |||||||||| ||||||||   |||| ||||||||||    
T  21575152 agtaaggttttaacgaagcatatcgtgatggacatccaatggggagtgttat-aaataaataacttagtggatgtccatccttagtcttccaccttccta 21575054  T
Q  488 taacccc 494  Q
    |||||||    
T  21575053 taacccc 21575047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 347 - 418
Target Start/End: Complemental strand, 22231086 - 22231014
Alignment:
Q  347 gtactctttttccttcactagaattttttcccatt-ggtttttctttagtaatgttttaatgaggcatatcct 418  Q
    ||||||||||||||||||||  ||||| ||||||| |||||||  ||||||| | ||||| ||||||||||||    
T  22231086 gtactctttttccttcactaatattttctcccattgggttttttcttagtaagggtttaacgaggcatatcct 22231014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 37395400 - 37395360
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaa 134  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  37395400 cacaattcaaccccccttcttgtgtttttctcaccttcaaa 37395360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 13533214 - 13533175
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  13533214 cacaattcaaccccccttcttgtgtttttctcaccttcaa 13533175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 17456659 - 17456620
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  17456659 cacaattcaaccccccttcttgtgtttttctcaccttcaa 17456620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 21199915 - 21199954
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  21199915 cacaattcaaccccccttcttgtgtttttctcaccttcaa 21199954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 22185199 - 22185160
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  22185199 cacaattcaacccctcttcttttgtttttctcaccttcaa 22185160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 30742248 - 30742197
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagctt 69  Q
    |||||||||||| |||| |||| ||||||||| |||| ||||||||||||||    
T  30742248 acatcacttcagaagtagaactatatctgcttctgatcagtgttttcagctt 30742197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 31487441 - 31487402
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  31487441 cacaattcaaccccccttcttgtgtttttctcaccttcaa 31487402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 474
Target Start/End: Original strand, 35104960 - 35105048
Alignment:
Q  385 ttttctttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttatga-aataaagacttagtggatatccatcctt 474  Q
    |||| |||||||| ||||||| |||||||||||| ||| |||| || || |||||||||||| ||| |  ||||||||||| |||||||||    
T  35104960 ttttttttagtaaggttttaacgaggcatatccttatgcacatccatggaggagtgttatgataatta--acttagtggatgtccatcctt 35105048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 40033685 - 40033724
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  40033685 cacaattcaaccccccttcttgtgtttttctcaccttcaa 40033724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 3246365 - 3246399
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  3246365 cacaattcaaccccccttcttgtgtttttctcacc 3246399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21076011 - 21076065
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| ||||| |||||||| |||| |||||| ||||||||||    
T  21076011 acatcacttcagaagtagaactcaatctgcttctgatcagtgttatcagcttagg 21076065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21100578 - 21100632
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||  |||  |||||||||||||| |||| |||||||||||||||||    
T  21100578 acatcacttcaaaagtggaactctatctgcttctgatcagtgttttcagcttagg 21100632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 21702471 - 21702437
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  21702471 cacaattcaaccccccttcttgtgtttttctcacc 21702437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 22000855 - 22000909
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||| ||||| || |||||||||| ||||| |||| |||||||||||||||||    
T  22000855 acatcatttcagaagcataactctatttgcttctgatcagtgttttcagcttagg 22000909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 23477609 - 23477575
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  23477609 cacaattcaaccccccttcttgtgtttttctcacc 23477575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 27276621 - 27276655
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  27276621 cacaattcaaccccccttcttgtgtttttctcacc 27276655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 133
Target Start/End: Original strand, 31144223 - 31144261
Alignment:
Q  95 acaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  31144223 acaattcaaccccccttcttgtgtttttctcaccttcaa 31144261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 33021883 - 33021849
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  33021883 cacaattcaaccccccttcttgtgtttttctcacc 33021849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 42242849 - 42242815
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  42242849 cacaattcaaccccccttcttgtgtttttctcacc 42242815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 29948658 - 29948569
Alignment:
Q  385 ttttctttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttatgaaataaagacttagtggatatccatcctt 474  Q
    |||| |||||| | ||||||| || ||||||| | || ||||| |||||||||||||||||||  |   ||||||||||| |||||||||    
T  29948658 ttttgtttagtgaggttttaacgatgcatatcatgatagacatccaagggggagtgttatgaataattaacttagtggatgtccatcctt 29948569  T

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Target: scaffold0124 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 39348 - 39449
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| |||||| ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  39348 gtactctttttccttcactggaattttttcccactgggtttttctctagtaaggttttaatgaggcatatcctcgatggaca-tcaagggggagtgttat 39446  T
Q  445 gaa 447  Q
    |||    
T  39447 gaa 39449  T

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Target: scaffold0014 (Bit Score: 61; Significance: 8e-26; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 111780 - 111880
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccatt-ggtttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  111780 gtactctttttccttcactagaatttttctcctattaggtttttctctagtaaggttttaatgaggcatatcctcaatggacatccaagggggagtgtta 111879  T
Q  444 t 444  Q
    |    
T  111880 t 111880  T

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Target: scaffold0004 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 347 - 447
Target Start/End: Complemental strand, 345925 - 345823
Alignment:
Q  347 gtactctttttccttcactagaattttttccca-ttggtttttctttagtaatgttttaatgaggcatatcc-tcatggacattcaagggggagtgttat 444  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| |||||| |||||||||||||||||||   |||||||| ||||||||||||||||    
T  345925 gtactctttttccttcactggaattttttcccactgggtttttctctagtaaggttttaatgaggcatatccgagatggacatccaagggggagtgttat 345826  T
Q  445 gaa 447  Q
    |||    
T  345825 gaa 345823  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 378348 - 378405
Alignment:
Q  15 tggacatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||| |||||||||| || | |||||||| ||||| |||||||||||||||| |||||    
T  378348 tggaaatcacttcagaagcagaactctatttgcttctgattagtgttttcagattagg 378405  T

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Target: scaffold0102 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 13930 - 14030
Alignment:
Q  347 gtactctttttccttcactagaattttt-tcccattgg-tttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    |||||||||||||||||||||||||||| ||| ||| | ||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  13930 gtactctttttccttcactagaatttttctcctattagatttttctctagtaaggttttaatgaggcatatcctcaatggacatccaagggggagtgtta 14029  T
Q  444 t 444  Q
    |    
T  14030 t 14030  T

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Target: scaffold0066 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 11499 - 11602
Alignment:
Q  347 gtactctttttccttcactagaa-ttttttcccattgg-tttttctttagtaatgttttaatgaggcatatcctc-atggacattcaagggggagtgtta 443  Q
    ||||||||||||||||||||||| |||||| |||| || ||||||| |||||  ||||||||||||||||||||| |||||||| |||| ||||||||||    
T  11499 gtactctttttccttcactagaattttttttccatcggatttttctctagtatggttttaatgaggcatatcctcgatggacatccaagagggagtgtta 11598  T
Q  444 tgaa 447  Q
    ||||    
T  11599 tgaa 11602  T

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Target: scaffold0081 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 347 - 418
Target Start/End: Original strand, 7670 - 7742
Alignment:
Q  347 gtactctttttccttcactagaattttttcccattg-gtttttctttagtaatgttttaatgaggcatatcct 418  Q
    ||||||||||||||||||||  ||||||| |||||| ||||||  ||||||| ||||||||||||||||||||    
T  7670 gtactctttttccttcactaagatttttttccattgagttttttcttagtaaggttttaatgaggcatatcct 7742  T

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Target: scaffold0062 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 383 - 447
Target Start/End: Original strand, 19754 - 19818
Alignment:
Q  383 gtttttctttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttatgaa 447  Q
    |||||||| |||||| |||||||||||||||||||  |||||||| ||||||| |||||||||||    
T  19754 gtttttctatagtaaggttttaatgaggcatatccagatggacatccaaggggaagtgttatgaa 19818  T

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Target: scaffold0062; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 383 - 447
Target Start/End: Original strand, 29922 - 29986
Alignment:
Q  383 gtttttctttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttatgaa 447  Q
    |||||||| |||||| |||||||||||||||||||  |||||||| ||||||| |||||||||||    
T  29922 gtttttctatagtaaggttttaatgaggcatatccagatggacatccaaggggaagtgttatgaa 29986  T

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Target: scaffold0359 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 6524 - 6578
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| ||||||||||||||||||| ||||||||| |||||||    
T  6524 acatcacttcagaagtagaactctatctgcttttgataagtgttttcggcttagg 6578  T

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Target: scaffold0023 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 102866 - 102812
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  102866 acatcacttcagaagtagaactctatctgcttatgatcagtgttttcagcttagg 102812  T

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Target: scaffold0859 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 2280 - 2226
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||||||||| |||| ||||| |||||||||||    
T  2280 acatcacttcagaagtagaactctatctgcttctgatcagtgtattcagcttagg 2226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 2204 - 2170
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  2204 cacaattcaaccccacttcttgtgtttttctcacc 2170  T

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Target: scaffold0479 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 9277 - 9223
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| || ||||||||||| |||| |||||||||||||||||    
T  9277 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttagg 9223  T

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Target: scaffold0210 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 932 - 878
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| || ||||||||||| |||| |||||||||||||||||    
T  932 acatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttagg 878  T

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Target: scaffold0163 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 25739 - 25685
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| |||||||| ||||| |||| |||||||||||||||||    
T  25739 acatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttagg 25685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 111400 - 111454
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||  |||| |||||||||||||| |||| |||||||||||||||||    
T  111400 acatcacttcaaaagtagaactctatctgcttctgatcagtgttttcagcttagg 111454  T

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Target: scaffold0290 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 19454 - 19503
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagc 67  Q
    ||||||| |||| |||| |||||||||||||| |||||||||||||||||    
T  19454 acatcacgtcagaagtagaactctatctgcttctgattagtgttttcagc 19503  T

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Target: scaffold0439 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 7509 - 7557
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcag 66  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||||    
T  7509 acatcacttcagaagtagaactctatctgcttctgatcagtgttttcag 7557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 24576 - 24624
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcag 66  Q
    |||||||||||| |||| | |||||||||||| ||||||||||||||||    
T  24576 acatcacttcagaagtagagctctatctgcttctgattagtgttttcag 24624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 7904 - 7865
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  7904 cacaattcaacccctcttcttatgtttttctcaccttcaa 7865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 7976 - 7926
Alignment:
Q  22 cacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||| |||  |||||||||||||| |||| |||||||||||||||||    
T  7976 cacttcagaagtggaactctatctgcttctgatcagtgttttcagcttagg 7926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 19358 - 19315
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaaat 137  Q
    |||||||||||||| |||||||||||||||||| | ||||||||    
T  19358 cacaattcaaccccccttcttgtgtttttctcaacttcaaaaat 19315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 10907 - 10962
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttt-tgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| ||||||||||||||| |||| ||| |||||||||||||    
T  10907 acatcacttcagaagtagaactctatctgctttctgatcagtattttcagcttagg 10962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 15571 - 15626
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttt-tgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| ||||||||||||||| |||| ||| |||||||||||||    
T  15571 acatcacttcagaagtagaactctatctgctttctgatcagtattttcagcttagg 15626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 21811 - 21850
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  21811 cacaattcaaccccccttcttgtgtttttctcaccttcaa 21850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 33735 - 33774
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  33735 cacaattcaaccccccttcttgtgtttttctcaccttcaa 33774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 52568 - 52607
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  52568 cacaattcaaccccccttcttgtgtttttctcaccttcaa 52607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 36664 - 36625
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  36664 cacaattcaaccccccttcttgtgtttttctcaccttcaa 36625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 134724 - 134685
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaa 133  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  134724 cacaattcaaccccccttcttgtgtttttctcaccttcaa 134685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 652 - 618
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  652 cacaattcaaccccccttcttgtgtttttctcacc 618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 1901 - 1867
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  1901 cacaattcaaccccccttcttgtgtttttctcacc 1867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 2689 - 2655
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  2689 cacaattcaaccccccttcttgtgtttttctcacc 2655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 3053 - 3087
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  3053 cacaattcaaccccccttcttgtgtttttctcacc 3087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 5408 - 5374
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  5408 cacaattcaaccccccttcttgtgtttttctcacc 5374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 23862 - 23820
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcaccatcaaaaa 136  Q
    |||||||||||||  |||||||||||||||||||| |||||||    
T  23862 cacaattcaaccctccttcttgtgtttttctcaccttcaaaaa 23820  T

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Target: scaffold0267 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 7190 - 7224
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  7190 cacaattcaaccccccttcttgtgtttttctcacc 7224  T

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Target: scaffold0205 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 752 - 806
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| || || |||||||| |||| |||||||||||||||||    
T  752 acatcacttcagaagtagaattccatctgcttctgatcagtgttttcagcttagg 806  T

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Target: scaffold0205; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 828 - 862
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  828 cacaattcaaccccccttcttgtgtttttctcacc 862  T

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Target: scaffold0115 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 17642 - 17588
Alignment:
Q  18 acatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||||||||||| |||| || ||||| ||||| |||| |||||||||||||||||    
T  17642 acatcacttcagaagtagaaatctatttgcttctgatcagtgttttcagcttagg 17588  T

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Target: scaffold0084 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 31824 - 31790
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  31824 cacaattcaaccccccttcttgtgtttttctcacc 31790  T

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Target: scaffold0068 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 11439 - 11473
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  11439 cacaattcaaccccccttcttgtgtttttctcacc 11473  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 88475 - 88509
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  88475 cacaattcaaccccccttcttgtgtttttctcacc 88509  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 250883 - 250849
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||| ||||||||||||||||||||||    
T  250883 cacaattcaacctctcttcttgtgtttttctcacc 250849  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 63570 - 63536
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  63570 cacaattcaaccccccttcttgtgtttttctcacc 63536  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 476167 - 476201
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  476167 cacaattcaaccccccttcttgtgtttttctcacc 476201  T

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Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 482687 - 482721
Alignment:
Q  94 cacaattcaacccctcttcttgtgtttttctcacc 128  Q
    |||||||||||||| ||||||||||||||||||||    
T  482687 cacaattcaaccccccttcttgtgtttttctcacc 482721  T

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Target: scaffold1457 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1457
Description:

Target: scaffold1457; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 448
Target Start/End: Complemental strand, 1172 - 1115
Alignment:
Q  391 ttagtaatgttttaatgaggcatatcctcatggacattcaagggggagtgttatgaaa 448  Q
    ||||||| || ||||||||||||||| | ||  |||| ||||||||||||||||||||    
T  1172 ttagtaaagtattaatgaggcatatcatgatcaacatccaagggggagtgttatgaaa 1115  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 7193 - 7136
Alignment:
Q  15 tggacatcacttcaggagtataactctatctgcttttgattagtgttttcagcttagg 72  Q
    |||| ||||||| || || |||||||||| ||||| |||| |||||||||||||||||    
T  7193 tggaaatcacttaagaagcataactctatttgcttctgatcagtgttttcagcttagg 7136  T

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