View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7761_low_7 (Length: 523)
Name: NF7761_low_7
Description: NF7761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7761_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 493; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 1 - 505
Target Start/End: Complemental strand, 7544514 - 7544010
Alignment:
| Q |
1 |
agtttcgaaggtgccattttagcttatagtacttcttaaaggcgtgtatctcagaaatatgctcacatatgtatttacttgaagattttgcactttgcgc |
100 |
Q |
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||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7544514 |
agtttcgaaggtgccattttaacttaaagtacttcttaaaggcgtgtatctcagaaatatgctcacatatgtatttacttgaagattttgcactttgcgc |
7544415 |
T |
|
| Q |
101 |
aaaagaagtgttaatcttggctaatcagttgtccaagtctaaattataagaagagtaaaattctctccacaaagtcggtaaacattttgacagtttccag |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7544414 |
aaaagaagtgttaatcttggctaatcagttgtccaagtctaaattataagaagagtaaaattctctccacaaagtcggtaaacattttgacagtttccag |
7544315 |
T |
|
| Q |
201 |
caacttaatgtttcttttctgaatcctaataaagagttgcgaagaagaggcctctggtcaagccgccaaatcttctagatcatgagaaaacagatagtga |
300 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7544314 |
caacttaatgtttcttttctgaatcctaataaagagttgcgaagaagaggcctctggtcaagccgccaaatcttctagatcatgagaaaacagatagtga |
7544215 |
T |
|
| Q |
301 |
atggcgtgacaaaggcacatatgatgagtcacggtgtttggaaggtaaacaaggtgaaacctttcctcgtatcaggataattggccaataaaaattgccg |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
7544214 |
atggcgtgacaaaggcacatatgatgagtcacggtgtttggaaggtaaacaaggtgaaacctttcctcgtatcaggataattggtcaataaaaattgccg |
7544115 |
T |
|
| Q |
401 |
acataagaaataacgcaaaaggtgtcgctttgaagaatcttgaaagttaagagattcatggaaccaaacaagaccaattttccgtttgatgtttagcaca |
500 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7544114 |
acataagaaataacgcaaaaggtgtcgctttgaagaatcttgaaagttaagagattcatggaaccaaacaagaccaattttccgtttgatgtttagcaca |
7544015 |
T |
|
| Q |
501 |
taatg |
505 |
Q |
| |
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||||| |
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| T |
7544014 |
taatg |
7544010 |
T |
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