View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7761_low_8 (Length: 515)

Name: NF7761_low_8
Description: NF7761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7761_low_8
NF7761_low_8
[»] chr4 (49 HSPs)
chr4 (1-498)||(37798080-37798572)
chr4 (140-282)||(37789412-37789554)
chr4 (1-57)||(28236411-28236467)
chr4 (1-58)||(40424559-40424616)
chr4 (1-55)||(2557670-2557724)
chr4 (1-58)||(21528517-21528574)
chr4 (1-58)||(25575053-25575110)
chr4 (1-58)||(30634102-30634159)
chr4 (1-58)||(35690500-35690557)
chr4 (4-57)||(39100533-39100586)
chr4 (1-50)||(48622547-48622596)
chr4 (1-58)||(50238611-50238668)
chr4 (1-58)||(50238697-50238754)
chr4 (1-58)||(55007975-55008032)
chr4 (1-57)||(436458-436514)
chr4 (10-58)||(1211388-1211436)
chr4 (10-58)||(7066495-7066543)
chr4 (10-50)||(8459058-8459098)
chr4 (1-57)||(12494892-12494948)
chr4 (10-58)||(44719357-44719405)
chr4 (10-58)||(45209201-45209249)
chr4 (10-58)||(46153946-46153994)
chr4 (10-50)||(49686931-49686971)
chr4 (10-50)||(49738554-49738594)
chr4 (1-57)||(52569512-52569568)
chr4 (5-57)||(56130403-56130455)
chr4 (10-49)||(35555655-35555694)
chr4 (1-55)||(56375519-56375573)
chr4 (1-58)||(6957827-6957884)
chr4 (1-58)||(8286668-8286725)
chr4 (14-59)||(8327143-8327188)
chr4 (1-58)||(19061931-19061988)
chr4 (1-50)||(22873603-22873652)
chr4 (1-50)||(31959818-31959867)
chr4 (1-50)||(38841608-38841657)
chr4 (1-58)||(42293261-42293318)
chr4 (13-58)||(43774098-43774143)
chr4 (1-58)||(48174089-48174146)
chr4 (26-59)||(51051450-51051483)
chr4 (1-50)||(54529647-54529696)
chr4 (1-49)||(7947166-7947214)
chr4 (1-57)||(19969410-19969466)
chr4 (10-50)||(20047672-20047712)
chr4 (10-58)||(31961262-31961310)
chr4 (22-58)||(35585855-35585891)
chr4 (10-58)||(42285699-42285747)
chr4 (1-57)||(45204837-45204893)
chr4 (1-49)||(50862860-50862908)
chr4 (2-50)||(53517735-53517783)
[»] chr8 (32 HSPs)
chr8 (9-58)||(32569706-32569755)
chr8 (1-57)||(39702183-39702239)
chr8 (10-56)||(31309591-31309637)
chr8 (1-58)||(14742078-14742135)
chr8 (1-58)||(32931189-32931246)
chr8 (10-55)||(39953263-39953308)
chr8 (10-58)||(1064958-1065006)
chr8 (1-57)||(11523720-11523776)
chr8 (10-50)||(18473976-18474016)
chr8 (1-57)||(36545378-36545434)
chr8 (1-56)||(1928585-1928640)
chr8 (6-57)||(30198263-30198314)
chr8 (10-57)||(30559936-30559983)
chr8 (1-60)||(45419464-45419523)
chr8 (17-59)||(16008390-16008432)
chr8 (1-55)||(25473402-25473456)
chr8 (11-57)||(42584597-42584643)
chr8 (1-55)||(45041315-45041369)
chr8 (1-58)||(490564-490621)
chr8 (1-58)||(40982892-40982949)
chr8 (13-58)||(41031416-41031461)
chr8 (13-58)||(41031522-41031567)
chr8 (1-58)||(42854000-42854057)
chr8 (1-58)||(44047528-44047585)
chr8 (1-50)||(44529454-44529503)
chr8 (10-50)||(5205413-5205453)
chr8 (6-58)||(5266178-5266230)
chr8 (12-48)||(18741872-18741908)
chr8 (12-48)||(18746836-18746872)
chr8 (10-58)||(21121383-21121431)
chr8 (12-56)||(35324013-35324057)
chr8 (26-58)||(39947102-39947134)
[»] chr2 (37 HSPs)
chr2 (6-50)||(16113678-16113722)
chr2 (1-51)||(45482988-45483038)
chr2 (1-58)||(227418-227475)
chr2 (1-58)||(3635319-3635376)
chr2 (1-58)||(17670697-17670754)
chr2 (10-55)||(28960210-28960255)
chr2 (1-58)||(30306261-30306318)
chr2 (1-58)||(35643177-35643234)
chr2 (1-58)||(38328366-38328423)
chr2 (1-58)||(43573126-43573183)
chr2 (1-57)||(4807824-4807880)
chr2 (10-58)||(8560802-8560850)
chr2 (1-57)||(9531597-9531653)
chr2 (1-57)||(25834907-25834963)
chr2 (10-58)||(44437717-44437765)
chr2 (10-57)||(9556366-9556413)
chr2 (10-57)||(12470894-12470941)
chr2 (10-57)||(12489799-12489846)
chr2 (1-56)||(12520060-12520115)
chr2 (13-59)||(25284951-25284997)
chr2 (1-55)||(28508907-28508961)
chr2 (11-57)||(33287660-33287706)
chr2 (12-58)||(36608678-36608724)
chr2 (1-58)||(451644-451701)
chr2 (1-58)||(3866301-3866358)
chr2 (1-50)||(12474931-12474980)
chr2 (1-58)||(12734929-12734986)
chr2 (17-50)||(13474218-13474251)
chr2 (1-58)||(24214015-24214072)
chr2 (1-50)||(41763047-41763096)
chr2 (2-43)||(43610670-43610711)
chr2 (6-38)||(6230280-6230312)
chr2 (1-57)||(7326157-7326213)
chr2 (10-58)||(15775841-15775889)
chr2 (2-50)||(19234988-19235036)
chr2 (10-50)||(35704220-35704260)
chr2 (10-50)||(38452690-38452730)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-50)||(16807-16856)
[»] chr7 (46 HSPs)
chr7 (1-58)||(32631793-32631850)
chr7 (1-55)||(1011275-1011329)
chr7 (1-55)||(21078146-21078200)
chr7 (1-58)||(12841271-12841328)
chr7 (1-62)||(27649009-27649070)
chr7 (1-58)||(28208324-28208381)
chr7 (1-58)||(29650613-29650670)
chr7 (1-58)||(31005434-31005491)
chr7 (1-58)||(31682598-31682655)
chr7 (1-58)||(39906368-39906425)
chr7 (1-50)||(40149017-40149066)
chr7 (1-58)||(43491537-43491594)
chr7 (1-57)||(2885719-2885775)
chr7 (1-57)||(5418303-5418359)
chr7 (26-66)||(6807745-6807785)
chr7 (1-57)||(11594189-11594245)
chr7 (10-58)||(14593990-14594038)
chr7 (10-58)||(16013513-16013561)
chr7 (1-57)||(24598185-24598240)
chr7 (10-58)||(38607230-38607278)
chr7 (10-58)||(44855170-44855218)
chr7 (1-56)||(17907722-17907777)
chr7 (1-56)||(37618174-37618229)
chr7 (11-50)||(38103619-38103658)
chr7 (10-60)||(21244277-21244327)
chr7 (1-55)||(31869101-31869155)
chr7 (10-56)||(41483725-41483771)
chr7 (11-57)||(48515514-48515560)
chr7 (1-50)||(6263488-6263537)
chr7 (1-50)||(6375097-6375146)
chr7 (1-50)||(28627937-28627986)
chr7 (6-59)||(30199962-30200015)
chr7 (1-58)||(38900186-38900242)
chr7 (1-58)||(40630663-40630720)
chr7 (1-50)||(40979932-40979981)
chr7 (1-58)||(42969927-42969984)
chr7 (10-58)||(4604785-4604833)
chr7 (10-58)||(12966254-12966302)
chr7 (1-57)||(28708610-28708666)
chr7 (10-50)||(34745985-34746025)
chr7 (10-58)||(36869233-36869281)
chr7 (1-57)||(42187670-42187726)
chr7 (1-57)||(43281903-43281959)
chr7 (1-57)||(45836479-45836535)
chr7 (10-58)||(45840992-45841040)
chr7 (11-55)||(47652786-47652830)
[»] chr5 (27 HSPs)
chr5 (1-58)||(14665941-14665998)
chr5 (1-55)||(18855836-18855890)
chr5 (1-58)||(4496613-4496670)
chr5 (10-58)||(12492380-12492428)
chr5 (10-58)||(28976855-28976903)
chr5 (1-57)||(29816611-29816667)
chr5 (1-56)||(408492-408547)
chr5 (10-57)||(28411914-28411961)
chr5 (2-56)||(11675760-11675814)
chr5 (6-60)||(43557827-43557881)
chr5 (10-55)||(1287578-1287623)
chr5 (1-58)||(2915492-2915549)
chr5 (1-50)||(3302073-3302122)
chr5 (10-55)||(7678715-7678760)
chr5 (1-58)||(10639531-10639588)
chr5 (1-58)||(14668000-14668057)
chr5 (1-50)||(16347384-16347433)
chr5 (1-58)||(28276467-28276524)
chr5 (1-58)||(30213804-30213861)
chr5 (1-58)||(32442122-32442178)
chr5 (10-51)||(38501421-38501462)
chr5 (1-58)||(41894302-41894359)
chr5 (10-50)||(3000977-3001017)
chr5 (10-58)||(4653490-4653538)
chr5 (10-50)||(25938207-25938247)
chr5 (25-57)||(38661415-38661447)
chr5 (1-57)||(42576239-42576295)
[»] chr3 (30 HSPs)
chr3 (1-58)||(52927844-52927901)
chr3 (1-58)||(53262370-53262427)
chr3 (8-58)||(4660163-4660213)
chr3 (1-58)||(22301-22358)
chr3 (1-58)||(5169061-5169118)
chr3 (1-58)||(12096701-12096758)
chr3 (1-58)||(31146928-31146985)
chr3 (1-58)||(45374473-45374530)
chr3 (1-58)||(48508464-48508521)
chr3 (10-58)||(311305-311353)
chr3 (10-50)||(14415264-14415304)
chr3 (10-57)||(48532196-48532243)
chr3 (10-57)||(51447714-51447761)
chr3 (1-56)||(52139029-52139084)
chr3 (1-60)||(53519809-53519868)
chr3 (10-56)||(35032764-35032810)
chr3 (1-59)||(45834595-45834653)
chr3 (1-58)||(7895876-7895933)
chr3 (1-50)||(31566165-31566214)
chr3 (1-50)||(38060943-38060992)
chr3 (10-55)||(39512781-39512826)
chr3 (1-50)||(41529990-41530039)
chr3 (1-58)||(47555328-47555385)
chr3 (17-58)||(49179621-49179662)
chr3 (10-58)||(3987572-3987620)
chr3 (1-49)||(6988131-6988179)
chr3 (11-55)||(37083291-37083335)
chr3 (1-57)||(43694768-43694824)
chr3 (10-50)||(47233600-47233640)
chr3 (1-57)||(49503565-49503621)
[»] chr1 (42 HSPs)
chr1 (1-58)||(4029351-4029408)
chr1 (1-58)||(28090690-28090747)
chr1 (1-58)||(34444585-34444642)
chr1 (17-58)||(42340099-42340140)
chr1 (1-56)||(4415578-4415633)
chr1 (1-55)||(8796438-8796492)
chr1 (1-58)||(25979227-25979284)
chr1 (1-58)||(26299297-26299354)
chr1 (1-50)||(28533696-28533745)
chr1 (1-58)||(30202126-30202183)
chr1 (1-58)||(43481794-43481851)
chr1 (1-57)||(1210974-1211030)
chr1 (1-57)||(19936689-19936745)
chr1 (10-58)||(38758016-38758064)
chr1 (1-57)||(41560458-41560514)
chr1 (1-56)||(696499-696554)
chr1 (10-57)||(4707218-4707265)
chr1 (1-56)||(29577481-29577536)
chr1 (10-57)||(38807668-38807715)
chr1 (1-56)||(44941774-44941829)
chr1 (10-48)||(49377539-49377577)
chr1 (1-58)||(3818852-3818909)
chr1 (1-58)||(4318841-4318898)
chr1 (1-50)||(4380189-4380237)
chr1 (9-58)||(7922062-7922111)
chr1 (16-57)||(11584241-11584282)
chr1 (1-58)||(15086151-15086208)
chr1 (1-50)||(37462880-37462929)
chr1 (17-58)||(41017213-41017254)
chr1 (1-58)||(41165511-41165568)
chr1 (17-58)||(49102324-49102365)
chr1 (1-50)||(49347397-49347446)
chr1 (10-55)||(51440764-51440809)
chr1 (1-58)||(51602285-51602342)
chr1 (1-50)||(52561593-52561642)
chr1 (1-50)||(52921309-52921358)
chr1 (10-58)||(2914119-2914167)
chr1 (13-57)||(3059554-3059598)
chr1 (1-49)||(6025834-6025882)
chr1 (1-57)||(22090325-22090381)
chr1 (1-57)||(37311752-37311808)
chr1 (1-57)||(44751713-44751769)
[»] scaffold0570 (1 HSPs)
scaffold0570 (1-66)||(935-1001)
[»] chr6 (15 HSPs)
chr6 (1-59)||(34500-34558)
chr6 (1-63)||(12890804-12890866)
chr6 (1-50)||(1615227-1615276)
chr6 (1-58)||(3206455-3206512)
chr6 (1-58)||(28085605-28085662)
chr6 (1-56)||(30679625-30679680)
chr6 (12-58)||(5258144-5258190)
chr6 (1-58)||(20427632-20427690)
chr6 (1-58)||(579647-579704)
chr6 (1-50)||(608390-608439)
chr6 (1-50)||(9706999-9707048)
chr6 (1-50)||(33730194-33730243)
chr6 (1-50)||(34934834-34934883)
chr6 (10-50)||(5053764-5053804)
chr6 (1-57)||(30642998-30643054)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-58)||(28885-28942)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-58)||(31697-31754)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-57)||(25529-25585)
[»] scaffold0006 (1 HSPs)
scaffold0006 (13-58)||(163190-163235)
[»] scaffold0491 (1 HSPs)
scaffold0491 (12-48)||(3677-3713)
[»] scaffold0022 (1 HSPs)
scaffold0022 (10-58)||(99282-99330)


Alignment Details
Target: chr4 (Bit Score: 429; Significance: 0; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 1 - 498
Target Start/End: Original strand, 37798080 - 37798572
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgttttgaaataatgtatgtttttattttatcttttgtaaagacag 100  Q
    |||| ||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37798080 atttgatcaatgtagccgactccatttagtgggataaggcttggttattgttgttgttttgaaataatgtatgtttttattttatcttttgtaaagacag 37798179  T
Q  101 gaatgtatctttactctcaattaaaatgctcatatactagtcacgtaatatttcaggggaagtttatttataaacctttatgccgagggtattgctttaa 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37798180 gaatgtatcttcactctcaattaaaatgctcatatactagtcacgtaatatttcaggggaagtttatttataaacctttatgccgagggtattgctttaa 37798279  T
Q  201 cctcagcaacatttatgctagctatgttcaaccttactccaggcattaccttcatcatggcaatattatttgggtactcactctatactcgttatacctt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37798280 cctcagcaacatttatgctagctatgttcaaccttactccaggcattaccttcatcatggcaatattatttgggtactcactc-atactcgttatacctt 37798378  T
Q  301 tcttgttttcaaaacaacatgtgaattcgactctaagacattattccacgactttgcatttctttctttctaaatgcttaaggttgcccaatacgctgcc 400  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    ||||||||||||||||||||||||||||||||||||||    
T  37798379 tcttgttttcaaaacaacttgtgaattcgactctaagacattattccacgacttcgca----tttctttctaaatgcttaaggttgcccaatacgctgcc 37798474  T
Q  401 tgatcctcgtccagctgcagcaacagagtaaaaatggcaattgtgatgtcataagtgctactagaagggggatagctagttgacttagttgcgctaag 498  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  37798475 tgatcctcgtccagctgcagcaacagagtaaaaatggcaattgtgatgtcataagtgctactagaagggggatatatagttcacttagttgcgctaag 37798572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 140 - 282
Target Start/End: Original strand, 37789412 - 37789554
Alignment:
Q  140 gtcacgtaatatttcaggggaagtttatttataaacctttatgccgagggtattgctttaacctcagcaacatttatgctagctatgttcaaccttactc 239  Q
    |||| ||| |||| |||||||||||||||||| ||  | | |||||| || ||  ||||||||||| ||||||||||| | |||||||||||||||||||    
T  37789412 gtcatgtattattccaggggaagtttatttatgaatatgtttgccgaaggcatgactttaacctcatcaacatttatgttcgctatgttcaaccttactc 37789511  T
Q  240 caggcattaccttcatcatggcaatattatttgggtactcact 282  Q
    |||||||||||||||||||||||||||| || |||||||||||    
T  37789512 caggcattaccttcatcatggcaatattcttcgggtactcact 37789554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28236411 - 28236467
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  28236411 atttgatctatgtagccgaccccacttagtgggataagacttggttgttgttgttgt 28236467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40424559 - 40424616
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||||||| ||||  |||||||| ||||||||||||||||||| |||||||    
T  40424559 atttaatctatgtagtcgacctcatttagtaggataagacttggttgttgttgttgtt 40424616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2557724 - 2557670
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    |||| ||| |||||||| |||||||||||||||||||| ||||||||||| ||||    
T  2557724 atttgatccatgtagccaactccatttagtgggataaggcttggttgttgttgtt 2557670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21528517 - 21528574
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  21528517 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 21528574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25575053 - 25575110
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||| ||| ||||||||||||||||| ||||||||||| |||||||    
T  25575053 atttgatccatgtagcagaccccatttagtgggataaggcttggttgttgttgttgtt 25575110  T

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Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30634159 - 30634102
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  30634159 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 30634102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35690500 - 35690557
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||||||||||| ||| |||||||    
T  35690500 atttgatccatgtagccgaccccacttagtgggataagacttggtttttgttgttgtt 35690557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 39100586 - 39100533
Alignment:
Q  4 taatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    ||||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  39100586 taatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 39100533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 48622596 - 48622547
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||||||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  48622596 atttaatccatgtagccgaccccacttagtgggataaggcttggttgttg 48622547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50238668 - 50238611
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  50238668 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 50238611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50238754 - 50238697
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  50238754 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 50238697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 55007975 - 55008032
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  55007975 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 55008032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 436458 - 436514
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  436458 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 436514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 1211436 - 1211388
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| ||| ||| ||||||||||||||||||||| |||||||    
T  1211436 atgtagccgaccccacttaatgggataagacttggttgttgttgttgtt 1211388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 7066543 - 7066495
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||| ||| ||||||||||||||||| ||||||||||| |||||||    
T  7066543 atgtagctgaccccatttagtgggataaggcttggttgttgttgttgtt 7066495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 8459098 - 8459058
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||||||| || |||||||||||||||||||||||||||||    
T  8459098 atgtagccaaccccatttagtgggataagacttggttgttg 8459058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12494892 - 12494948
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||||||| ||||||| ||| ||| ||||||||||||| ||||||||||| ||||||    
T  12494892 atttaatccatgtagcggaccccacttagtgggataaggcttggttgttgttgttgt 12494948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 44719405 - 44719357
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| | | ||||||||||||||||||||||||| |||||||    
T  44719405 atgtagccgaccctacttagtgggataagacttggttgttgttgttgtt 44719357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 45209249 - 45209201
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  45209249 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 45209201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 46153946 - 46153994
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  46153946 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 46153994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 49686931 - 49686971
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttg 50  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  49686931 atgtagccgaccccacttagtgggataagacttggttgttg 49686971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 49738594 - 49738554
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttg 50  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  49738594 atgtagccgaccccatttagtgggataaggcttggttgttg 49738554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 52569568 - 52569512
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  52569568 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 52569512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 56130403 - 56130455
Alignment:
Q  5 aatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  56130403 aatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 56130455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 35555694 - 35555655
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgtt 49  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  35555694 atgtagccgactccatttagtgggacaaggcttggttgtt 35555655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 56375519 - 56375573
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    |||| ||| |||||||||||  || ||||||||||||||||||||||||| ||||    
T  56375519 atttgatccatgtagccgacctcacttagtgggataagacttggttgttgttgtt 56375573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6957827 - 6957884
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||  ||| ||||||||||||| ||||||||||| |||||||    
T  6957827 atttgatccatgtagccgatcccacttagtgggataaggcttggttgttgttgttgtt 6957884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8286668 - 8286725
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||| | ||| ||||||||||||| ||||||||||| |||||||    
T  8286668 atttgatccatgtagccgcccccacttagtgggataaggcttggttgttgttgttgtt 8286725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 8327143 - 8327188
Alignment:
Q  14 agccgactccatttagtgggataagacttggttgttgatgttgttt 59  Q
    ||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  8327143 agccgaccccacttagtgggataaggcttggttgttgttgttgttt 8327188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19061988 - 19061931
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| |||  |||||||||||| ||||||||||| |||||||    
T  19061988 atttgatccatgtagccgaccccacctagtgggataaggcttggttgttgttgttgtt 19061931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22873652 - 22873603
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||||||| |||||||| || ||||||||||||||||| |||||| ||||    
T  22873652 atttaatccatgtagccaaccccatttagtgggataaggcttggtagttg 22873603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31959867 - 31959818
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  31959867 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 31959818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38841657 - 38841608
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||||||||| |||||| ||||||||||||||| ||||| ||||||    
T  38841657 atttgatctatgtaaccgacttcatttagtgggataaaacttgattgttg 38841608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42293318 - 42293261
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||||||||||||| | ||| ||||||| ||||| | ||||||||| |||||||    
T  42293318 atttaatctatgtagccggccccacttagtggaataaggcctggttgttgttgttgtt 42293261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 43774098 - 43774143
Alignment:
Q  13 tagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||| ||||||||||||||||| |||| |||||| |||||||    
T  43774098 tagccgaccccatttagtgggataaggcttgattgttgttgttgtt 43774143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 48174146 - 48174089
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||| ||| ||| ||||||||||||| ||||||||||| |||||||    
T  48174146 atttgatccatgtagcagaccccacttagtgggataaggcttggttgttgttgttgtt 48174089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 59
Target Start/End: Complemental strand, 51051483 - 51051450
Alignment:
Q  26 ttagtgggataagacttggttgttgatgttgttt 59  Q
    ||||||||||||||||||||||||| ||||||||    
T  51051483 ttagtgggataagacttggttgttgttgttgttt 51051450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 54529647 - 54529696
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| |||||||||   |||||||||||||||||||||||||||||    
T  54529647 atttgatccatgtagccggacccatttagtgggataagacttggttgttg 54529696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7947166 - 7947214
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgtt 49  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||    
T  7947166 atttgatccatgtagccgaccccacttagtgggataaggcttggttgtt 7947214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19969410 - 19969466
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||||||| || |||||||| ||||||    
T  19969410 atttgatccatgtagccgaccccacttagtgggataaggctcggttgttgttgttgt 19969466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 20047672 - 20047712
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttg 50  Q
    ||||||||| | ||| |||||||||||||||||||||||||    
T  20047672 atgtagccggccccacttagtgggataagacttggttgttg 20047712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 31961310 - 31961262
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||||||  || ||||||||||||| ||||||||||| |||||||    
T  31961310 atgtagccgacctcacttagtgggataaggcttggttgttgttgttgtt 31961262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 35585855 - 35585891
Alignment:
Q  22 ccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  35585855 ccatttagtgggataaggcttggttgttgttgttgtt 35585891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 42285747 - 42285699
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||| || ||| ||||| ||||||||||||||||||| |||||||    
T  42285747 atgtagccaaccccacttagttggataagacttggttgttgttgttgtt 42285699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 45204893 - 45204837
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| |||||||||||| || | | ||||||||||||| ||||||||||| ||||||    
T  45204893 atttgatctatgtagcccacccaacttagtgggataaggcttggttgttgttgttgt 45204837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50862860 - 50862908
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgtt 49  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||    
T  50862860 atttgatccatgtagccgaccccacttagtgggataaggcttggttgtt 50862908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 53517735 - 53517783
Alignment:
Q  2 tttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    ||||||| ||||||||||| | | ||||||| |||||||||||||||||    
T  53517735 tttaatccatgtagccgaccctacttagtggaataagacttggttgttg 53517783  T

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Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 32569755 - 32569706
Alignment:
Q  9 tatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  32569755 tatgtagccgaccccatttagtgggataagacttggttgttgttgttgtt 32569706  T

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Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 39702183 - 39702239
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| |||||||||||||||  ||||||||||||||| |||||||||||||| ||||    
T  39702183 atttgatctatgtagccgaccacatttagtgggataaaacttggttgttgatattgt 39702239  T

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Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 31309591 - 31309637
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttg 56  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||||    
T  31309591 atgtagccgacaccacttagtgggataagacttggttgttgttgttg 31309637  T

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Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14742135 - 14742078
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  14742135 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 14742078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32931189 - 32931246
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||| ||| |||||||||||||||||||    
T  32931189 atttgatccatgtagccgaccccacttagtgggaaaagccttggttgttgatgttgtt 32931246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 39953308 - 39953263
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    ||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  39953308 atgtagccgaccccacttagtgggataagacttggttgttgttgtt 39953263  T

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Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 1064958 - 1065006
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  1064958 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 1065006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11523776 - 11523720
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  11523776 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 11523720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 18474016 - 18473976
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttg 50  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  18474016 atgtagccgacaccacttagtgggataagacttggttgttg 18473976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 36545378 - 36545434
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  36545378 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 36545434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1928640 - 1928585
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 56  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  1928640 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttg 1928585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 30198314 - 30198263
Alignment:
Q  6 atctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||||||| |||||| ||| ||||||||||||| ||||||||||| ||||||    
T  30198314 atctatgttgccgaccccacttagtgggataaggcttggttgttgttgttgt 30198263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 30559936 - 30559983
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  30559936 atgtagccgaccccagttagtgggataaggcttggttgttgttgttgt 30559983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 45419464 - 45419523
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtttt 60  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||| |||||    
T  45419464 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtagtttt 45419523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 16008432 - 16008390
Alignment:
Q  17 cgactccatttagtgggataagacttggttgttgatgttgttt 59  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||    
T  16008432 cgaccccacttagtgggataagacttggttgttgttgttgttt 16008390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 25473456 - 25473402
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  25473456 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 25473402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 42584597 - 42584643
Alignment:
Q  11 tgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||||||||| ||| |||||||||||||||||| |||||| ||||||    
T  42584597 tgtagccgaccccacttagtgggataagacttgattgttgttgttgt 42584643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 45041369 - 45041315
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    |||| ||| ||||||| ||| ||| ||||||||||||| ||||||||||||||||    
T  45041369 atttgatccatgtagctgaccccacttagtgggataaggcttggttgttgatgtt 45041315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 490564 - 490621
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||| |||||| |||||||    
T  490564 atttgatccatgtagccgaccccacttagtgggataaggcttgtttgttgttgttgtt 490621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40982949 - 40982892
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| |||| |||||| ||||||||||||| ||| ||||||||||| |||||||    
T  40982949 atttgatccatgttgccgaccccatttagtgggaaaaggcttggttgttgttgttgtt 40982892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 41031461 - 41031416
Alignment:
Q  13 tagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  41031461 tagccgaccccacttagtgggataaggcttggttgttgttgttgtt 41031416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 41031567 - 41031522
Alignment:
Q  13 tagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  41031567 tagccgaccccacttagtgggataaggcttggttgttgttgttgtt 41031522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42854057 - 42854000
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| |||||||||||||||||  ||||| |||| |||||||    
T  42854057 atttgatccatgtagccgaccccatttagtgggataaggtttggtggttgttgttgtt 42854000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44047585 - 44047528
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||| ||| ||| ||||||||||||| ||||||||||| |||||||    
T  44047585 atttgatccatgtagctgaccccacttagtgggataaggcttggttgttgttgttgtt 44047528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44529454 - 44529503
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  44529454 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 44529503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 5205413 - 5205453
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||||| |||| ||| |||||||||||||||||||||||||    
T  5205413 atgtaggcgaccccacttagtgggataagacttggttgttg 5205453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 5266178 - 5266230
Alignment:
Q  6 atctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||||||||||| |||||||||||||||   ||| |||||| |||||||    
T  5266178 atctatgtagccgactgcatttagtgggataaactttgattgttgttgttgtt 5266230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 18741872 - 18741908
Alignment:
Q  12 gtagccgactccatttagtgggataagacttggttgt 48  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  18741872 gtagccgaccccacttagtgggataagacttggttgt 18741908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 18746836 - 18746872
Alignment:
Q  12 gtagccgactccatttagtgggataagacttggttgt 48  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  18746836 gtagccgaccccacttagtgggataagacttggttgt 18746872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 21121383 - 21121431
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| ||| ||||||||| ||| ||||||||||| |||||||    
T  21121383 atgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgtt 21121431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 35324013 - 35324057
Alignment:
Q  12 gtagccgactccatttagtgggataagacttggttgttgatgttg 56  Q
    ||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  35324013 gtagccgaccccacttagtgggataaggcttggttgttgttgttg 35324057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 39947102 - 39947134
Alignment:
Q  26 ttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||||||||||||||||| |||||||    
T  39947102 ttagtgggataagacttggttgttgttgttgtt 39947134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 16113678 - 16113722
Alignment:
Q  6 atctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  16113678 atctatgtagccgactccatttagtgggagaagacttggttgttg 16113722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 45483038 - 45482988
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttga 51  Q
    |||| ||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  45483038 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttga 45482988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 227418 - 227475
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  227418 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 227475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3635376 - 3635319
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  3635376 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 3635319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17670697 - 17670754
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  17670697 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 17670754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 28960255 - 28960210
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    |||||| |||||||||||||||||||||| ||||||||||| ||||    
T  28960255 atgtagtcgactccatttagtgggataaggcttggttgttgttgtt 28960210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30306261 - 30306318
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  30306261 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 30306318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35643177 - 35643234
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||  ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  35643177 atttaatacatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 35643234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38328423 - 38328366
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  38328423 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 38328366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43573183 - 43573126
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  43573183 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 43573126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4807824 - 4807880
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  4807824 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 4807880  T

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Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 8560850 - 8560802
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| | | ||||||||||||||||||||||||| |||||||    
T  8560850 atgtagccgacccaacttagtgggataagacttggttgttgttgttgtt 8560802  T

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Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9531653 - 9531597
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  9531653 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 9531597  T

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Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25834907 - 25834963
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  25834907 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 25834963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 44437765 - 44437717
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  44437765 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 44437717  T

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Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 9556413 - 9556366
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    ||||||||||||||| |||||||||| || ||||||||||| ||||||    
T  9556413 atgtagccgactccacttagtgggatgaggcttggttgttgttgttgt 9556366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 12470941 - 12470894
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    ||||||||||| ||||||||||||||||| |||||| |||| ||||||    
T  12470941 atgtagccgaccccatttagtgggataaggcttggtggttgttgttgt 12470894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 12489846 - 12489799
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  12489846 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 12489799  T

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Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12520115 - 12520060
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 56  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  12520115 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttg 12520060  T

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Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 25284997 - 25284951
Alignment:
Q  13 tagccgactccatttagtgggataagacttggttgttgatgttgttt 59  Q
    |||||||||||| ||| ||||||||| ||||||||||| ||||||||    
T  25284997 tagccgactccacttactgggataaggcttggttgttgttgttgttt 25284951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 28508907 - 28508961
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  28508907 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 28508961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 33287660 - 33287706
Alignment:
Q  11 tgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    ||||||| |||||| ||||||||| ||||||||||||||| ||||||    
T  33287660 tgtagccaactccacttagtgggacaagacttggttgttgttgttgt 33287706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 36608724 - 36608678
Alignment:
Q  12 gtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||||||||  |||||||||||||||||||||||| |||||||    
T  36608724 gtagtcgactccacgtagtgggataagacttggttgttgttgttgtt 36608678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 451701 - 451644
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||| ||| ||||||||||| |||||||    
T  451701 atttgatccatgtagccgaccccacttagtgggacaaggcttggttgttgttgttgtt 451644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3866301 - 3866358
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||| ||||||| ||||||||||| |||||||    
T  3866301 atttgatccatgtagccgaccccacttagtaggataaggcttggttgttgttgttgtt 3866358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 12474980 - 12474931
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  12474980 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 12474931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12734929 - 12734986
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| |||||| |||| ||| ||||||||||||| ||||||||||| |||||||    
T  12734929 atttgatccatgtagtcgaccccacttagtgggataaggcttggttgttgttgttgtt 12734986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 13474251 - 13474218
Alignment:
Q  17 cgactccatttagtgggataagacttggttgttg 50  Q
    |||||||| |||||||||||||||||||||||||    
T  13474251 cgactccacttagtgggataagacttggttgttg 13474218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 24214015 - 24214072
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||| ||||||||||| |||  | ||||||||||| |||||||||| |||||||    
T  24214015 atttaatccatgtagccgaccccaccttgtgggataagatttggttgttgttgttgtt 24214072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41763096 - 41763047
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  41763096 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 41763047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 43610711 - 43610670
Alignment:
Q  2 tttaatctatgtagccgactccatttagtgggataagacttg 43  Q
    ||||||| ||||||||||| |||||| |||||||||||||||    
T  43610711 tttaatccatgtagccgaccccatttggtgggataagacttg 43610670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 6230312 - 6230280
Alignment:
Q  6 atctatgtagccgactccatttagtgggataag 38  Q
    |||||||||||| ||||||||||||||||||||    
T  6230312 atctatgtagcctactccatttagtgggataag 6230280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7326213 - 7326157
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| |||||||| || ||| ||||||||||||| ||||||||||| ||||||    
T  7326213 atttgatccatgtagccaaccccacttagtgggataaggcttggttgttgttgttgt 7326157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 15775889 - 15775841
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| ||| ||||||| ||||| ||||||||||| |||||||    
T  15775889 atgtagccgaccccacttagtggaataaggcttggttgttgttgttgtt 15775841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 19235036 - 19234988
Alignment:
Q  2 tttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    ||||||| |||||||| |||||| ||||||||||||| ||| |||||||    
T  19235036 tttaatccatgtagccaactccacttagtgggataaggcttagttgttg 19234988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 35704260 - 35704220
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||||||||||  ||||||||||||||||||||| ||||||    
T  35704260 atgtagccgacatcatttagtgggataagacttgattgttg 35704220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 38452730 - 38452690
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttg 50  Q
    ||||||||||| ||| ||||||||||||| |||||||||||    
T  38452730 atgtagccgaccccacttagtgggataaggcttggttgttg 38452690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16807 - 16856
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||||||    
T  16807 atttgatctatgtagccgactccacttagtgggataaggcttggttgttg 16856  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32631793 - 32631850
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  32631793 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 32631850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1011275 - 1011329
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    |||| ||||||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  1011275 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 1011329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21078146 - 21078200
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    |||| ||| |||||||||||| |||||||||||||||| ||||||||||| ||||    
T  21078146 atttgatccatgtagccgacttcatttagtgggataaggcttggttgttgttgtt 21078200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12841328 - 12841271
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  12841328 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 12841271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27649009 - 27649070
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgttttga 62  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||| ||||||    
T  27649009 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtttttttga 27649070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28208381 - 28208324
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  28208381 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 28208324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29650613 - 29650670
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  29650613 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 29650670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31005434 - 31005491
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  31005434 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 31005491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 31682655 - 31682598
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  31682655 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 31682598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 39906425 - 39906368
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  39906425 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 39906368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40149066 - 40149017
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| |||||||||||||| |||| ||||||||||||| |||||||||||    
T  40149066 atttgatctatgtagccgaatccacttagtgggataaggcttggttgttg 40149017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43491537 - 43491594
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  43491537 atttcatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 43491594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2885775 - 2885719
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  2885775 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 2885719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 5418303 - 5418359
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| |||||| |||| ||||||||||||||||| ||||||||||| ||||||    
T  5418303 atttgatccatgtagtcgaccccatttagtgggataaggcttggttgttgttgttgt 5418359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 6807745 - 6807785
Alignment:
Q  26 ttagtgggataagacttggttgttgatgttgttttgaaata 66  Q
    |||||||||||||| |||||||||| |||||||||||||||    
T  6807745 ttagtgggataagatttggttgttgttgttgttttgaaata 6807785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11594189 - 11594245
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  11594189 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 11594245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 14593990 - 14594038
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  14593990 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 14594038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 16013513 - 16013561
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  16013513 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 16013561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24598240 - 24598185
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||||| ||||| ||||||||||||||||||||| ||||||    
T  24598240 atttgatccatgtagccgactc-atttaatgggataagacttggttgttgttgttgt 24598185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 38607230 - 38607278
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  38607230 atgtagccgactccacttagtgggttaaggcttggttgttgttgttgtt 38607278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 44855218 - 44855170
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  44855218 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 44855170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17907777 - 17907722
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 56  Q
    |||| ||| ||||||||||| ||||||||  ||||||||||||||||||| |||||    
T  17907777 atttgatccatgtagccgaccccatttagcaggataagacttggttgttgttgttg 17907722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37618174 - 37618229
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 56  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  37618174 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttg 37618229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 38103658 - 38103619
Alignment:
Q  11 tgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  38103658 tgtagccgaccccagttagtgggataagacttggttgttg 38103619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 21244327 - 21244277
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtttt 60  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||| ||||    
T  21244327 atgtagccgaccccacttagtgggataaggcttggttgttgttgttttttt 21244277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31869155 - 31869101
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  31869155 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 31869101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 41483725 - 41483771
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttg 56  Q
    ||||||||||| ||| |||||||||||||| |||||||||| |||||    
T  41483725 atgtagccgaccccacttagtgggataagatttggttgttgttgttg 41483771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 48515514 - 48515560
Alignment:
Q  11 tgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||||||||| ||| ||||||||||||||||||||| ||| ||||||    
T  48515514 tgtagccgaccccacttagtgggataagacttggtttttgttgttgt 48515560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6263488 - 6263537
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  6263488 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 6263537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6375097 - 6375146
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  6375097 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 6375146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28627986 - 28627937
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||||||| ||||||||||||| ||| |||||||    
T  28627986 atttgatccatgtagccgactccacttagtgggataaggcttagttgttg 28627937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 30200015 - 30199962
Alignment:
Q  6 atctatgtagccgactccatttagtgggataagacttggttgttgatgttgttt 59  Q
    ||||||||||||| | ||  ||||||||||||| ||||||||||| ||||||||    
T  30200015 atctatgtagccggccccgcttagtgggataaggcttggttgttgttgttgttt 30199962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38900186 - 38900242
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  38900186 atttgatccatgtagccgac-ccacttagtgggataaggcttggttgttgttgttgtt 38900242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40630663 - 40630720
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||| ||| ||||||||||| |||||||    
T  40630663 atttgatccatgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgtt 40630720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40979981 - 40979932
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  40979981 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 40979932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42969927 - 42969984
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||| ||| |||||||||||    
T  42969927 atttgatccatgtagccgaccccacttagtgggataaggctttgttattgatgttgtt 42969984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 4604785 - 4604833
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||| || ||| ||||||||||||||||||||| ||| |||||||    
T  4604785 atgtagccaaccccacttagtgggataagacttggttcttgttgttgtt 4604833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 12966254 - 12966302
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||  ||| ||||||||||||| ||||||||||| |||||||    
T  12966254 atgtagccgatcccacttagtgggataaggcttggttgttgttgttgtt 12966302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28708610 - 28708666
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||| || ||||||    
T  28708610 atttgatccatgtagccgaccccacttagtgggataaggcttggttgatgttgttgt 28708666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 34745985 - 34746025
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttg 50  Q
    ||||||||||| ||| ||||||||||||| |||||||||||    
T  34745985 atgtagccgaccccacttagtgggataaggcttggttgttg 34746025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 36869281 - 36869233
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| ||| ||| ||||||||| ||||||||||| |||||||    
T  36869281 atgtagccgaccccacttaatgggataaggcttggttgttgttgttgtt 36869233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42187670 - 42187726
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||| ||||||| ||||||    
T  42187670 atttgatccatgtagccgaccccacttagtgggataaggctttgttgttgttgttgt 42187726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 43281903 - 43281959
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||| ||| ||||||||||| ||||||    
T  43281903 atttgatccatgtagccgaccccacttagtgggacaaggcttggttgttgttgttgt 43281959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 45836535 - 45836479
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||||||| || |||||||| ||||||    
T  45836535 atttgatccatgtagccgaccccacttagtgggataaggctcggttgttgttgttgt 45836479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 45841040 - 45840992
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||| ||| ||| ||||||| ||||||||||||||||| |||||||    
T  45841040 atgtagctgaccccaattagtggtataagacttggttgttgttgttgtt 45840992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 47652786 - 47652830
Alignment:
Q  11 tgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    |||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  47652786 tgtagccgaccccacttagtgggataaggcttggttgttgttgtt 47652830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14665941 - 14665998
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  14665941 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 14665998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18855836 - 18855890
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    |||| ||| ||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  18855836 atttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgtt 18855890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4496613 - 4496670
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  4496613 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 4496670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 12492428 - 12492380
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  12492428 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 12492380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 28976903 - 28976855
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  28976903 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 28976855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 29816611 - 29816667
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  29816611 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 29816667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 408547 - 408492
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 56  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  408547 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttg 408492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 28411914 - 28411961
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  28411914 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 28411961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 11675760 - 11675814
Alignment:
Q  2 tttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 56  Q
    ||||||| ||||||||||| ||| ||||| ||||||| ||||||||||| |||||    
T  11675760 tttaatccatgtagccgaccccacttagttggataaggcttggttgttgttgttg 11675814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 43557881 - 43557827
Alignment:
Q  6 atctatgtagccgactccatttagtgggataagacttggttgttgatgttgtttt 60  Q
    ||||||||||||||| ||| ||||||||||||| | ||||||||| ||| |||||    
T  43557881 atctatgtagccgaccccacttagtgggataaggcctggttgttgttgtagtttt 43557827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 1287623 - 1287578
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    ||||||||||| ||| ||||||||||||| ||||||| ||||||||    
T  1287623 atgtagccgaccccacttagtgggataaggcttggttattgatgtt 1287578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2915549 - 2915492
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||| ||| |||||||    
T  2915549 atttgatccatgtagccgaccccacttagtgggataaggcttggttattgttgttgtt 2915492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3302073 - 3302122
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  3302073 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 3302122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 7678715 - 7678760
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    ||||||||||| ||| |||||||||||| |||||||||||| ||||    
T  7678715 atgtagccgaccccacttagtgggataaaacttggttgttgttgtt 7678760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10639531 - 10639588
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| || |||||||||| ||||||||||| |||||||    
T  10639531 atttgatccatgtagccgaccccactttgtgggataaggcttggttgttgttgttgtt 10639588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14668000 - 14668057
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||| ||||| ||| ||||||||||||||||||||||| | |||||||    
T  14668000 atttgatccatgtaaccgaccccacttagtgggataagacttggttgtagttgttgtt 14668057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16347433 - 16347384
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| | | |||||||||||||||||||||||||    
T  16347433 atttgatccatgtagccgaccctacttagtgggataagacttggttgttg 16347384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28276467 - 28276524
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| |||||||| |||||| |||| |||||||| ||||||||||| |||||||    
T  28276467 atttgatccatgtagccaactccacttagcgggataaggcttggttgttgttgttgtt 28276524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30213804 - 30213861
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||  |||||||    
T  30213804 atttgatccatgtagccgaccccacttagtgggataaggcttggttgtttttgttgtt 30213861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 32442178 - 32442122
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||||||| ||||||||||||| ||||||| ||| |||||||    
T  32442178 atttgatccatgtagccgactccacttagtgggataag-cttggttattgttgttgtt 32442122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 38501462 - 38501421
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttga 51  Q
    ||||||||||  ||| ||||||||||||||||||||||||||    
T  38501462 atgtagccgatcccacttagtgggataagacttggttgttga 38501421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41894302 - 41894359
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| |||||||| || ||| ||||||||||||||||| ||||||| |||||||    
T  41894302 atttgatccatgtagccaaccccacttagtgggataagactttgttgttgttgttgtt 41894359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 3000977 - 3001017
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttg 50  Q
    ||||||||||| ||| ||||||||||||| |||||||||||    
T  3000977 atgtagccgaccccacttagtgggataaggcttggttgttg 3001017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 4653490 - 4653538
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||| ||||| ||| |||||| |||||||||||||||||| |||||||    
T  4653490 atgtatccgaccccacttagtgagataagacttggttgttgttgttgtt 4653538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 25938207 - 25938247
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||||||||||||||  ||||| ||||||||||||||||||    
T  25938207 atgtagccgactccacatagtgagataagacttggttgttg 25938247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 38661415 - 38661447
Alignment:
Q  25 tttagtgggataagacttggttgttgatgttgt 57  Q
    |||||||||||||||||||||||||| ||||||    
T  38661415 tttagtgggataagacttggttgttgttgttgt 38661447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42576239 - 42576295
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| | | ||||||||||||| ||||||||||| ||||||    
T  42576239 atttgatccatgtagccgacccgacttagtgggataaggcttggttgttgttgttgt 42576295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 52927901 - 52927844
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||||||||||    
T  52927901 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgatgttgtt 52927844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 53262370 - 53262427
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  53262370 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 53262427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 4660213 - 4660163
Alignment:
Q  8 ctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||| |||||||    
T  4660213 ctatgtagccgactccaattagtggaataaggcttggttgttgttgttgtt 4660163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22301 - 22358
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||||||||||||||| ||| ||||||||||||  ||||||||||| |||||||    
T  22301 atttgatctatgtagccgaccccacttagtgggataaagcttggttgttgttgttgtt 22358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5169061 - 5169118
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  5169061 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 5169118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12096758 - 12096701
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  12096758 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 12096701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31146928 - 31146985
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||||||| ||||||||||||| || |||||||| |||||||    
T  31146928 atttgatccatgtagccgactccacttagtgggataaggctcggttgttgttgttgtt 31146985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 45374530 - 45374473
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||| ||||||| ||| ||| ||||||||||||| ||||||||||| |||||||    
T  45374530 atttaatccatgtagctgaccccacttagtgggataaggcttggttgttgttgttgtt 45374473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 48508464 - 48508521
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  48508464 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 48508521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 311353 - 311305
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  311353 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 311305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 14415304 - 14415264
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttg 50  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  14415304 atgtagccgaccccacttagtgggataagacttggttgttg 14415264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 48532196 - 48532243
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  48532196 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 48532243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 51447761 - 51447714
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    ||||||||| | ||||||||||||||||| ||||||||||| ||||||    
T  51447761 atgtagccggccccatttagtgggataaggcttggttgttgttgttgt 51447714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 52139029 - 52139084
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 56  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  52139029 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttg 52139084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 53519809 - 53519868
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtttt 60  Q
    |||| ||| ||||||||||| ||| |||||| |||||| ||||||||||| |||||||||    
T  53519809 atttgatccatgtagccgaccccacttagtgagataaggcttggttgttgttgttgtttt 53519868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 35032810 - 35032764
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttg 56  Q
    ||||||||||| ||| ||||||||||||| ||||||| |||||||||    
T  35032810 atgtagccgaccccacttagtgggataaggcttggttattgatgttg 35032764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 45834653 - 45834595
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgttt 59  Q
    |||| ||| |||||||| || ||| ||||||||||||| ||||||||||| ||||||||    
T  45834653 atttgatccatgtagccaaccccacttagtgggataaggcttggttgttgttgttgttt 45834595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7895933 - 7895876
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||| ||||||||| ||||||||||| |||||||    
T  7895933 atttgatccatgtagccgaccccacttaatgggataaggcttggttgttgttgttgtt 7895876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31566214 - 31566165
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  31566214 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 31566165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38060943 - 38060992
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| |||||||||||||| ||||||||||    
T  38060943 atttgatccatgtagccgaccccacttagtgggataagaattggttgttg 38060992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 39512781 - 39512826
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  39512781 atgtagccgaccccacttagtgggataaggcttggttgttgttgtt 39512826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41529990 - 41530039
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  41529990 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 41530039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 47555385 - 47555328
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| |||||||| || ||| ||||||||||||| ||||||||||| |||||||    
T  47555385 atttgatccatgtagccaaccccacttagtgggataaggcttggttgttgttgttgtt 47555328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 49179621 - 49179662
Alignment:
Q  17 cgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| |||||||||||||||||||||| ||||||||||    
T  49179621 cgaccccacttagtgggataagacttggttgctgatgttgtt 49179662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 3987572 - 3987620
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||| ||||| ||| || |||||||||||||||||||||| |||||||    
T  3987572 atgtacccgaccccactttgtgggataagacttggttgttgttgttgtt 3987620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6988131 - 6988179
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgtt 49  Q
    |||| ||| |||||||||||||| |||||||||||||| ||| ||||||    
T  6988131 atttgatcaatgtagccgactccttttagtgggataaggcttagttgtt 6988179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 37083335 - 37083291
Alignment:
Q  11 tgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    |||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  37083335 tgtagccgaccccacttagtgggataaggcttggttgttgttgtt 37083291  T

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Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 43694824 - 43694768
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| |||||||||| |||| ||||||||||||||||  || |||||||| ||||||    
T  43694824 atttgatctatgtagtcgaccccatttagtgggataaagctgggttgttgttgttgt 43694768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 47233640 - 47233600
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttg 50  Q
    ||||||||||| ||| ||||||||||||| |||||||||||    
T  47233640 atgtagccgaccccagttagtgggataaggcttggttgttg 47233600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 49503621 - 49503565
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| | | ||||||||||||| ||||||||||| ||||||    
T  49503621 atttgatccatgtagccgaccctacttagtgggataaggcttggttgttgttgttgt 49503565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4029351 - 4029408
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||||||||||||||| |||||||    
T  4029351 atttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgttgtt 4029408  T

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Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28090747 - 28090690
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||||||||||||||| |||||||    
T  28090747 atttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgttgtt 28090690  T

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Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34444585 - 34444642
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  34444585 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 34444642  T

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Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 42340099 - 42340140
Alignment:
Q  17 cgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  42340099 cgactccatttagtgggataagacttggttgttgttgttgtt 42340140  T

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Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4415578 - 4415633
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 56  Q
    |||| ||| ||||||||||||||||||||||| | ||||||||||||||| |||||    
T  4415578 atttgatccatgtagccgactccatttagtggaaaaagacttggttgttgttgttg 4415633  T

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Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8796438 - 8796492
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    |||||||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  8796438 atttaatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 8796492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25979284 - 25979227
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  25979284 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 25979227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26299297 - 26299354
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| |||||||||||||||||||||| || |||||||    
T  26299297 atttgatccatgtagccgaccccacttagtgggataagacttggttgctgttgttgtt 26299354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28533696 - 28533745
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| |||||||||||||||||||||||||    
T  28533696 atttgatccatgtagccgaccccacttagtgggataagacttggttgttg 28533745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30202183 - 30202126
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  30202183 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 30202126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43481851 - 43481794
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  43481851 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 43481794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1210974 - 1211030
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  1210974 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 1211030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19936689 - 19936745
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||||||  |||||||||||||||||| |||||| ||||||    
T  19936689 atttgatccatgtagccgactccgcttagtgggataagacttgattgttgttgttgt 19936745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 38758064 - 38758016
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  38758064 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 38758016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 41560458 - 41560514
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  41560458 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 41560514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 696499 - 696554
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 56  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  696499 atttgatcaatgtagccgaccccacttagtgggataaggcttggttgttgttgttg 696554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 4707265 - 4707218
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  4707265 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 4707218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29577481 - 29577536
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 56  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  29577481 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttg 29577536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 38807715 - 38807668
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  38807715 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 38807668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44941829 - 44941774
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 56  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  44941829 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttg 44941774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 49377539 - 49377577
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgt 48  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  49377539 atgtagccgactccagttagtgggataaggcttggttgt 49377577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3818909 - 3818852
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| |||||||||||| || ||||||||||||| |||||| |||| |||||||    
T  3818909 atttgatccatgtagccgactgcacttagtgggataaggcttggtcgttgttgttgtt 3818852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4318898 - 4318841
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||| ||| ||||||||||| |||||||    
T  4318898 atttgatccatgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgtt 4318841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4380189 - 4380237
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| |||||||||||||||||||||||||    
T  4380189 attttatccatgtagccgac-ccacttagtgggataagacttggttgttg 4380237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 7922062 - 7922111
Alignment:
Q  9 tatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||  ||| ||| ||||||||||||||||||||||||| |||||||    
T  7922062 tatgtagttgaccccacttagtgggataagacttggttgttgttgttgtt 7922111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 11584241 - 11584282
Alignment:
Q  16 ccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    ||||||||| |||||||||||||||||| |||||| ||||||    
T  11584241 ccgactccacttagtgggataagacttgattgttgttgttgt 11584282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15086151 - 15086208
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| |||||||| || ||| ||||||||||||| ||||||||||| |||||||    
T  15086151 atttgatccatgtagccaaccccacttagtgggataaggcttggttgttgttgttgtt 15086208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37462929 - 37462880
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  37462929 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 37462880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 41017254 - 41017213
Alignment:
Q  17 cgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||| ||||||| ||||||||||||||||| |||||||    
T  41017254 cgactccacttagtggaataagacttggttgttgttgttgtt 41017213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41165511 - 41165568
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||| ||| ||||||||||| |||||||    
T  41165511 atttgatccatgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgtt 41165568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 49102324 - 49102365
Alignment:
Q  17 cgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||||||||||||||||| | ||||||||| |||||||    
T  49102324 cgactccatttagtgggataaggcatggttgttgttgttgtt 49102365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 49347446 - 49347397
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  49347446 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 49347397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 51440809 - 51440764
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgtt 55  Q
    ||||| ||||| ||| ||||||||||||||||||||||||| ||||    
T  51440809 atgtaaccgaccccacttagtgggataagacttggttgttgttgtt 51440764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 51602285 - 51602342
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| |||||||| || ||| ||||||||||||| ||||||||||| |||||||    
T  51602285 atttgatccatgtagccaaccccacttagtgggataaggcttggttgttgttgttgtt 51602342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 52561642 - 52561593
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  52561642 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 52561593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 52921309 - 52921358
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  52921309 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 52921358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 2914167 - 2914119
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||| || ||| ||||||||||||| ||||||||||| |||||||    
T  2914167 atgtagccaaccccacttagtgggataaggcttggttgttgttgttgtt 2914119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 3059554 - 3059598
Alignment:
Q  13 tagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||||||||||| || |||||||||| ||||||||||| ||||||    
T  3059554 tagccgactccacttggtgggataaggcttggttgttgttgttgt 3059598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6025834 - 6025882
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgtt 49  Q
    |||| ||| |||||||||| |||| |||||||||||| |||||||||||    
T  6025834 atttgatccatgtagccgattccacttagtgggataatacttggttgtt 6025882  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22090325 - 22090381
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| | ||||||||||| ||||||||||| ||||||    
T  22090325 atttgatccatgtagccgaccccactaagtgggataaggcttggttgttgttgttgt 22090381  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37311808 - 37311752
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| ||||||||||| ||| ||||||||| ||| ||||||||||| ||||||    
T  37311808 atttgatccatgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgt 37311752  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 44751713 - 44751769
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||| |||||||||||  || ||||||||||||| ||||||||||| ||||||    
T  44751713 atttgatccatgtagccgacctcacttagtgggataaggcttggttgttgttgttgt 44751769  T

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Target: scaffold0570 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1001 - 935
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt-ttgaaata 66  Q
    |||| ||| ||||||| ||| ||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  1001 atttgatccatgtagctgaccccatttagtgggataaggcttggttgttgttgttgttattgaaata 935  T

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Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34558 - 34500
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgttt 59  Q
    |||| ||| ||||||| ||| ||| ||||||||||||||||||||||||| ||||||||    
T  34558 atttgatccatgtagctgaccccacttagtgggataagacttggttgttgttgttgttt 34500  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12890804 - 12890866
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgttttgaa 63  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||| |||||    
T  12890804 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtattgaa 12890866  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1615276 - 1615227
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| |||||||||||  ||||||||||||||||||||||||||||    
T  1615276 atttgatccatgtagccgacctcatttagtgggataagacttggttgttg 1615227  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3206512 - 3206455
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||||||||||| ||| |||||||    
T  3206512 atttgatccatgtagccgaccccacttagtgggataagacttggttattgttgttgtt 3206455  T

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Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28085605 - 28085662
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  28085605 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 28085662  T

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Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30679625 - 30679680
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 56  Q
    |||| ||||||||||||||  ||| ||| ||||||||||||||||||||| |||||    
T  30679625 atttgatctatgtagccgatcccacttaatgggataagacttggttgttgttgttg 30679680  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 5258190 - 5258144
Alignment:
Q  12 gtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  5258190 gtagccgaccccacttagtgggataagtcttggttgttgttgttgtt 5258144  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20427690 - 20427632
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggat-aagacttggttgttgatgttgtt 58  Q
    |||||||| ||||||||||| | | |||||||||| ||||||||||||||| |||||||    
T  20427690 atttaatcaatgtagccgacccgacttagtgggataaagacttggttgttgttgttgtt 20427632  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 579647 - 579704
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||||||||||||||  ||| ||||||||||||  ||||||||||| |||||||    
T  579647 atttgatctatgtagccgatcccacttagtgggataaagcttggttgttgttgttgtt 579704  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 608390 - 608439
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| | | |||||||||||||||||||||||||    
T  608390 atttgatccatgtagccgaccctacttagtgggataagacttggttgttg 608439  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9706999 - 9707048
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  9706999 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 9707048  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33730194 - 33730243
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  33730194 atttcatccatgtagccgaccccacttagtgggataaggcttggttgttg 33730243  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34934883 - 34934834
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 50  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  34934883 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 34934834  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 5053764 - 5053804
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttg 50  Q
    ||||||||||| ||||||||| ||||||| |||||||||||    
T  5053764 atgtagccgaccccatttagtaggataaggcttggttgttg 5053804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 30642998 - 30643054
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||| ||||||||||||||| ||| |||| ||| |||| ||||||||||| ||||||    
T  30642998 atttgatctatgtagccgaccccacttagcgggttaaggcttggttgttgttgttgt 30643054  T

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Target: scaffold0168 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28942 - 28885
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  28942 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 28885  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31697 - 31754
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  31697 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 31754  T

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Target: scaffold0157 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 25585 - 25529
Alignment:
Q  1 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 57  Q
    |||||||| ||||||| ||| ||| ||||||||||||| ||||||||||| ||||||    
T  25585 atttaatccatgtagcggaccccacttagtgggataaggcttggttgttgttgttgt 25529  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 163235 - 163190
Alignment:
Q  13 tagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    |||||||||||||||||||| |||| ||||| |||||| |||||||    
T  163235 tagccgactccatttagtggaataaaacttgattgttgttgttgtt 163190  T

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Target: scaffold0491 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 3677 - 3713
Alignment:
Q  12 gtagccgactccatttagtgggataagacttggttgt 48  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  3677 gtagccgaccccacttagtgggataagacttggttgt 3713  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 99330 - 99282
Alignment:
Q  10 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 58  Q
    ||||||||||| |||  |||||||||||| ||||||||||| |||||||    
T  99330 atgtagccgacaccacatagtgggataaggcttggttgttgttgttgtt 99282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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