View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7762_high_3 (Length: 306)

Name: NF7762_high_3
Description: NF7762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7762_high_3
NF7762_high_3
[»] chr3 (63 HSPs)
chr3 (12-306)||(7820403-7820692)
chr3 (28-306)||(29536727-29536999)
chr3 (28-172)||(47854629-47854773)
chr3 (29-172)||(52293352-52293496)
chr3 (40-178)||(32973276-32973415)
chr3 (28-154)||(39287610-39287737)
chr3 (35-306)||(53048872-53049140)
chr3 (28-306)||(48825825-48826101)
chr3 (35-172)||(48034151-48034281)
chr3 (203-306)||(11220658-11220761)
chr3 (200-306)||(54653963-54654069)
chr3 (78-302)||(29537013-29537241)
chr3 (201-306)||(39287483-39287588)
chr3 (201-306)||(42633884-42633989)
chr3 (201-306)||(51825619-51825724)
chr3 (202-306)||(47855337-47855441)
chr3 (202-305)||(10987652-10987755)
chr3 (201-306)||(32979101-32979206)
chr3 (201-306)||(42632719-42632824)
chr3 (202-306)||(41386143-41386247)
chr3 (201-270)||(36626780-36626849)
chr3 (201-306)||(53808331-53808436)
chr3 (81-168)||(382101-382191)
chr3 (202-302)||(13077950-13078050)
chr3 (201-305)||(43103294-43103398)
chr3 (202-306)||(47808105-47808209)
chr3 (202-306)||(48035323-48035427)
chr3 (202-306)||(53047910-53048014)
chr3 (203-306)||(43101907-43102010)
chr3 (236-306)||(8372649-8372719)
chr3 (201-306)||(11219443-11219548)
chr3 (201-302)||(26798904-26799005)
chr3 (201-306)||(41387431-41387536)
chr3 (246-306)||(1301045-1301105)
chr3 (201-305)||(8371234-8371338)
chr3 (258-306)||(40502270-40502318)
chr3 (251-303)||(48034025-48034077)
chr3 (246-306)||(55443593-55443653)
chr3 (13-84)||(33149727-33149798)
chr3 (203-306)||(51400228-51400331)
chr3 (223-306)||(51401371-51401454)
chr3 (81-168)||(9777002-9777091)
chr3 (276-306)||(30838543-30838573)
chr3 (201-303)||(47806834-47806935)
chr3 (45-122)||(49334189-49334260)
chr3 (277-306)||(383046-383075)
chr3 (81-169)||(12060784-12060873)
chr3 (273-306)||(12105555-12105588)
chr3 (273-306)||(13041960-13041993)
chr3 (273-306)||(13050037-13050070)
chr3 (273-306)||(13997454-13997487)
chr3 (201-306)||(32973152-32973257)
chr3 (273-306)||(46988357-46988390)
chr3 (81-122)||(48866335-48866376)
chr3 (273-306)||(51213647-51213680)
chr3 (201-306)||(52293521-52293626)
chr3 (246-306)||(7822029-7822089)
chr3 (202-306)||(25583127-25583231)
chr3 (246-306)||(32974266-32974326)
chr3 (206-302)||(39288442-39288538)
chr3 (140-172)||(47855278-47855310)
chr3 (238-306)||(48252946-48253014)
chr3 (238-306)||(51214201-51214269)
[»] chr4 (51 HSPs)
chr4 (12-306)||(15446479-15446773)
chr4 (29-174)||(526548-526694)
chr4 (37-168)||(29834270-29834402)
chr4 (29-168)||(29833518-29833660)
chr4 (29-172)||(936360-936504)
chr4 (12-171)||(53150546-53150705)
chr4 (29-172)||(30671904-30672038)
chr4 (201-306)||(33377362-33377467)
chr4 (201-306)||(44302733-44302838)
chr4 (12-109)||(53400391-53400488)
chr4 (201-300)||(35787815-35787914)
chr4 (201-306)||(1273431-1273535)
chr4 (222-306)||(26393146-26393230)
chr4 (203-306)||(31711105-31711208)
chr4 (201-304)||(53400200-53400303)
chr4 (201-306)||(38370295-38370400)
chr4 (202-306)||(37560298-37560402)
chr4 (201-270)||(5688635-5688704)
chr4 (13-86)||(23153062-23153135)
chr4 (201-305)||(3217607-3217711)
chr4 (201-269)||(38417603-38417671)
chr4 (201-305)||(55953850-55953954)
chr4 (203-306)||(28103486-28103589)
chr4 (236-306)||(53177051-53177121)
chr4 (209-303)||(55952841-55952935)
chr4 (251-305)||(56000301-56000355)
chr4 (201-306)||(11094539-11094644)
chr4 (201-306)||(11114978-11115083)
chr4 (206-303)||(15787505-15787602)
chr4 (201-306)||(29833385-29833490)
chr4 (201-306)||(30683025-30683130)
chr4 (201-306)||(44128332-44128437)
chr4 (201-306)||(46796024-46796129)
chr4 (246-306)||(19049915-19049975)
chr4 (202-270)||(33376267-33376335)
chr4 (81-172)||(40146514-40146606)
chr4 (238-306)||(40146658-40146726)
chr4 (202-269)||(5687225-5687292)
chr4 (15-58)||(47606411-47606454)
chr4 (246-304)||(3533651-3533709)
chr4 (236-306)||(27408776-27408846)
chr4 (273-306)||(56297749-56297782)
chr4 (246-306)||(2310825-2310885)
chr4 (246-306)||(12396917-12396977)
chr4 (246-306)||(15445449-15445509)
chr4 (201-269)||(17319092-17319160)
chr4 (238-306)||(26202421-26202489)
chr4 (202-306)||(29686269-29686373)
chr4 (201-269)||(34438456-34438524)
chr4 (201-306)||(44126609-44126716)
chr4 (246-306)||(47667192-47667251)
[»] chr7 (60 HSPs)
chr7 (28-306)||(43935969-43936243)
chr7 (28-306)||(36673664-36673939)
chr7 (29-174)||(41126380-41126526)
chr7 (29-168)||(30222792-30222932)
chr7 (29-168)||(30223806-30223946)
chr7 (29-173)||(41618328-41618473)
chr7 (28-305)||(47163167-47163436)
chr7 (28-172)||(2903875-2904020)
chr7 (12-109)||(48754201-48754298)
chr7 (56-178)||(43935329-43935451)
chr7 (12-109)||(7347032-7347129)
chr7 (201-306)||(7148056-7148161)
chr7 (201-306)||(19279610-19279715)
chr7 (202-306)||(22744759-22744863)
chr7 (236-306)||(18801228-18801298)
chr7 (201-299)||(43007647-43007745)
chr7 (246-306)||(38001517-38001577)
chr7 (202-306)||(40926518-40926622)
chr7 (222-306)||(43935198-43935282)
chr7 (202-305)||(46674933-46675036)
chr7 (201-300)||(48754015-48754114)
chr7 (200-306)||(19278366-19278472)
chr7 (251-306)||(13446392-13446447)
chr7 (236-306)||(19848867-19848937)
chr7 (201-306)||(7347218-7347323)
chr7 (233-306)||(18802419-18802492)
chr7 (201-270)||(22746318-22746387)
chr7 (201-305)||(14206687-14206791)
chr7 (201-305)||(14215377-14215481)
chr7 (238-306)||(33459578-33459646)
chr7 (202-306)||(41126252-41126356)
chr7 (202-306)||(43930332-43930436)
chr7 (251-306)||(35088010-35088065)
chr7 (203-306)||(46458713-46458816)
chr7 (251-306)||(48755596-48755651)
chr7 (276-306)||(1884253-1884283)
chr7 (236-306)||(25153671-25153741)
chr7 (29-67)||(34557788-34557826)
chr7 (256-306)||(38778990-38779040)
chr7 (201-270)||(7146829-7146897)
chr7 (273-306)||(10338200-10338233)
chr7 (201-302)||(22060480-22060581)
chr7 (273-306)||(32610697-32610730)
chr7 (273-306)||(33229420-33229453)
chr7 (246-303)||(34557413-34557470)
chr7 (234-299)||(35087428-35087493)
chr7 (273-306)||(37374649-37374682)
chr7 (201-306)||(43006398-43006503)
chr7 (273-306)||(43705479-43705512)
chr7 (273-306)||(43705612-43705645)
chr7 (201-270)||(46673539-46673607)
chr7 (273-306)||(47810026-47810059)
chr7 (201-305)||(4857215-4857319)
chr7 (222-306)||(4858363-4858447)
chr7 (201-301)||(14107850-14107950)
chr7 (201-301)||(14417807-14417907)
chr7 (238-306)||(17288255-17288323)
chr7 (202-306)||(38406031-38406135)
chr7 (246-306)||(38408317-38408377)
chr7 (246-306)||(41616637-41616697)
[»] chr2 (45 HSPs)
chr2 (34-172)||(41312643-41312782)
chr2 (29-172)||(33836912-33837056)
chr2 (37-305)||(2305554-2305818)
chr2 (34-172)||(3665367-3665506)
chr2 (104-301)||(6208970-6209162)
chr2 (202-303)||(1624975-1625075)
chr2 (201-306)||(12852899-12853004)
chr2 (201-306)||(6706939-6707044)
chr2 (201-306)||(42027206-42027311)
chr2 (201-306)||(42028956-42029061)
chr2 (201-300)||(2581822-2581921)
chr2 (201-306)||(23177686-23177792)
chr2 (201-306)||(23588943-23589049)
chr2 (240-306)||(41795989-41796055)
chr2 (233-302)||(12958433-12958502)
chr2 (81-168)||(15268527-15268617)
chr2 (201-305)||(15650455-15650559)
chr2 (202-269)||(14509259-14509326)
chr2 (223-306)||(37867769-37867852)
chr2 (81-123)||(14510410-14510452)
chr2 (256-306)||(41313320-41313370)
chr2 (233-306)||(10368415-10368488)
chr2 (201-306)||(29424610-29424715)
chr2 (246-306)||(3255921-3255981)
chr2 (246-306)||(3665237-3665297)
chr2 (238-306)||(7038367-7038435)
chr2 (201-281)||(21012078-21012158)
chr2 (203-306)||(37869040-37869143)
chr2 (276-306)||(10477584-10477614)
chr2 (236-306)||(12854137-12854207)
chr2 (273-306)||(17858654-17858687)
chr2 (201-306)||(23178880-23178985)
chr2 (201-306)||(23590137-23590242)
chr2 (201-306)||(41312513-41312618)
chr2 (201-306)||(42246604-42246709)
chr2 (238-303)||(42368343-42368408)
chr2 (258-306)||(4628895-4628943)
chr2 (201-269)||(4829515-4829583)
chr2 (246-306)||(5564072-5564132)
chr2 (246-306)||(5565188-5565248)
chr2 (203-303)||(12959705-12959805)
chr2 (97-168)||(15268989-15269062)
chr2 (246-306)||(17179073-17179133)
chr2 (201-305)||(35799526-35799630)
chr2 (238-306)||(43015552-43015620)
[»] chr1 (64 HSPs)
chr1 (12-154)||(14391167-14391310)
chr1 (29-168)||(25889322-25889462)
chr1 (34-172)||(34531806-34531945)
chr1 (35-172)||(35684038-35684176)
chr1 (47-172)||(48973341-48973467)
chr1 (34-172)||(48934944-48935083)
chr1 (35-306)||(2237814-2238081)
chr1 (12-109)||(20953496-20953593)
chr1 (12-109)||(42248119-42248216)
chr1 (201-306)||(26056145-26056250)
chr1 (201-303)||(16217456-16217558)
chr1 (202-306)||(3978057-3978161)
chr1 (201-306)||(14390271-14390376)
chr1 (201-306)||(47410997-47411102)
chr1 (203-306)||(13930675-13930778)
chr1 (200-306)||(3979310-3979416)
chr1 (201-306)||(25785981-25786086)
chr1 (201-306)||(25787162-25787267)
chr1 (212-300)||(26054916-26055004)
chr1 (202-305)||(13641271-13641374)
chr1 (203-306)||(14071203-14071306)
chr1 (201-299)||(42248303-42248401)
chr1 (12-153)||(6709830-6709977)
chr1 (201-306)||(20953301-20953406)
chr1 (201-306)||(52742974-52743079)
chr1 (81-172)||(2971842-2971934)
chr1 (201-269)||(36511329-36511397)
chr1 (202-306)||(52181304-52181408)
chr1 (243-306)||(9123439-9123502)
chr1 (201-270)||(16218476-16218545)
chr1 (201-270)||(47136685-47136754)
chr1 (201-270)||(47411446-47411515)
chr1 (202-306)||(2236826-2236930)
chr1 (246-306)||(9119815-9119875)
chr1 (246-306)||(14312788-14312848)
chr1 (201-269)||(19466203-19466271)
chr1 (238-306)||(32823471-32823539)
chr1 (246-306)||(33941330-33941390)
chr1 (246-306)||(34532745-34532805)
chr1 (202-306)||(35683068-35683172)
chr1 (201-269)||(36509861-36509929)
chr1 (246-306)||(43190541-43190601)
chr1 (246-306)||(50678379-50678439)
chr1 (238-301)||(32823576-32823639)
chr1 (251-306)||(42244517-42244572)
chr1 (246-305)||(43189572-43189631)
chr1 (251-306)||(52741501-52741556)
chr1 (251-305)||(1873902-1873956)
chr1 (204-306)||(34531676-34531778)
chr1 (201-279)||(51726842-51726920)
chr1 (201-306)||(21277007-21277112)
chr1 (273-306)||(25432509-25432542)
chr1 (201-306)||(35684201-35684305)
chr1 (273-306)||(47511380-47511413)
chr1 (273-306)||(47511971-47512004)
chr1 (201-306)||(48935108-48935213)
chr1 (222-270)||(9592287-9592335)
chr1 (246-306)||(13568488-13568548)
chr1 (201-269)||(14765092-14765160)
chr1 (238-306)||(20171197-20171265)
chr1 (81-172)||(40812493-40812584)
chr1 (202-306)||(47560152-47560256)
chr1 (201-269)||(49141494-49141562)
chr1 (238-306)||(50679856-50679924)
[»] chr5 (40 HSPs)
chr5 (28-172)||(20988833-20988978)
chr5 (35-172)||(15510100-15510236)
chr5 (28-188)||(42980547-42980700)
chr5 (28-305)||(42979462-42979726)
chr5 (35-172)||(4567094-4567230)
chr5 (84-306)||(15614843-15615063)
chr5 (208-305)||(7345395-7345492)
chr5 (202-305)||(15613519-15613622)
chr5 (201-306)||(18693711-18693816)
chr5 (203-306)||(12947925-12948028)
chr5 (212-306)||(18677989-18678083)
chr5 (201-306)||(10085843-10085948)
chr5 (201-306)||(21387650-21387755)
chr5 (201-269)||(15857616-15857684)
chr5 (28-172)||(15613647-15613774)
chr5 (202-305)||(26404209-26404312)
chr5 (201-303)||(5384344-5384446)
chr5 (202-306)||(1663200-1663304)
chr5 (202-306)||(8762399-8762503)
chr5 (202-306)||(26403320-26403424)
chr5 (201-306)||(5382955-5383060)
chr5 (201-306)||(15510261-15510366)
chr5 (201-302)||(40058035-40058136)
chr5 (246-306)||(15509208-15509268)
chr5 (201-269)||(42510164-42510232)
chr5 (251-306)||(12933764-12933819)
chr5 (203-306)||(12936102-12936205)
chr5 (203-306)||(19525288-19525391)
chr5 (251-306)||(20988703-20988758)
chr5 (276-306)||(1982725-1982755)
chr5 (251-305)||(32521700-32521754)
chr5 (201-306)||(4566964-4567069)
chr5 (273-306)||(12937802-12937835)
chr5 (213-270)||(27894033-27894090)
chr5 (246-306)||(4568017-4568077)
chr5 (246-306)||(5062229-5062289)
chr5 (273-305)||(12951967-12951999)
chr5 (246-306)||(15153890-15153950)
chr5 (238-306)||(37371070-37371138)
chr5 (254-306)||(40059379-40059431)
[»] scaffold0177 (1 HSPs)
scaffold0177 (35-306)||(1768-2035)
[»] chr6 (29 HSPs)
chr6 (28-306)||(19368346-19368621)
chr6 (202-306)||(27438803-27438907)
chr6 (202-306)||(27440174-27440278)
chr6 (201-306)||(31738376-31738481)
chr6 (202-305)||(22299902-22300005)
chr6 (201-270)||(8412314-8412383)
chr6 (210-306)||(5311292-5311388)
chr6 (202-306)||(26581966-26582069)
chr6 (202-305)||(33807703-33807806)
chr6 (203-269)||(31740272-31740338)
chr6 (201-306)||(2138635-2138740)
chr6 (202-303)||(8411102-8411203)
chr6 (201-306)||(33802015-33802120)
chr6 (203-279)||(293640-293716)
chr6 (202-306)||(9927619-9927722)
chr6 (238-306)||(12203306-12203374)
chr6 (246-306)||(13173050-13173110)
chr6 (246-306)||(19367730-19367790)
chr6 (246-306)||(26584080-26584140)
chr6 (246-306)||(28225437-28225497)
chr6 (238-305)||(21749249-21749316)
chr6 (88-169)||(14326279-14326361)
chr6 (88-169)||(14419289-14419371)
chr6 (81-169)||(16269499-16269588)
chr6 (201-306)||(18139485-18139590)
chr6 (273-306)||(33328388-33328421)
chr6 (246-306)||(8447234-8447294)
chr6 (246-306)||(8456038-8456098)
chr6 (13-77)||(17359050-17359114)
[»] scaffold0002 (1 HSPs)
scaffold0002 (29-172)||(458298-458434)
[»] chr8 (41 HSPs)
chr8 (29-119)||(6843923-6844013)
chr8 (12-109)||(45385608-45385705)
chr8 (47-171)||(38665709-38665832)
chr8 (201-306)||(19913505-19913610)
chr8 (202-306)||(31623919-31624023)
chr8 (201-301)||(37274905-37275005)
chr8 (206-306)||(38591010-38591110)
chr8 (201-306)||(41866907-41867012)
chr8 (201-306)||(45385792-45385897)
chr8 (223-306)||(14820206-14820289)
chr8 (225-303)||(7770919-7770997)
chr8 (246-303)||(7816131-7816188)
chr8 (201-306)||(36756077-36756182)
chr8 (201-305)||(117062-117166)
chr8 (202-306)||(36940032-36940136)
chr8 (210-306)||(37472416-37472512)
chr8 (204-306)||(24069447-24069549)
chr8 (246-303)||(7796850-7796907)
chr8 (202-303)||(31625383-31625484)
chr8 (202-306)||(4807379-4807483)
chr8 (201-301)||(7486095-7486195)
chr8 (201-269)||(13367048-13367116)
chr8 (222-306)||(38589834-38589917)
chr8 (201-306)||(16363810-16363915)
chr8 (201-306)||(24068343-24068448)
chr8 (201-306)||(37276241-37276346)
chr8 (201-270)||(41867914-41867983)
chr8 (212-305)||(43277930-43278023)
chr8 (238-306)||(3612618-3612686)
chr8 (202-306)||(10053743-10053847)
chr8 (201-305)||(36070192-36070296)
chr8 (246-305)||(6843769-6843828)
chr8 (203-302)||(29739643-29739742)
chr8 (201-306)||(1570204-1570309)
chr8 (201-306)||(3237431-3237535)
chr8 (273-306)||(3271911-3271944)
chr8 (238-303)||(4675768-4675833)
chr8 (136-169)||(4807511-4807544)
chr8 (273-306)||(30864525-30864558)
chr8 (201-301)||(27750619-27750719)
chr8 (246-306)||(39515212-39515272)
[»] scaffold0003 (2 HSPs)
scaffold0003 (202-306)||(48455-48559)
scaffold0003 (202-306)||(47083-47187)
[»] scaffold0051 (1 HSPs)
scaffold0051 (202-305)||(22142-22244)
[»] scaffold2127 (1 HSPs)
scaffold2127 (201-270)||(513-582)
[»] scaffold0178 (1 HSPs)
scaffold0178 (201-306)||(2263-2368)
[»] scaffold0155 (1 HSPs)
scaffold0155 (246-306)||(5182-5242)
[»] scaffold0038 (1 HSPs)
scaffold0038 (246-306)||(25935-25995)
[»] scaffold0012 (1 HSPs)
scaffold0012 (12-152)||(242606-242752)
[»] scaffold1974 (1 HSPs)
scaffold1974 (201-270)||(626-695)
[»] scaffold1878 (1 HSPs)
scaffold1878 (201-270)||(579-648)
[»] scaffold0839 (1 HSPs)
scaffold0839 (273-306)||(38-71)
[»] scaffold0290 (2 HSPs)
scaffold0290 (201-306)||(8392-8497)
scaffold0290 (201-270)||(9476-9545)
[»] scaffold0045 (1 HSPs)
scaffold0045 (202-270)||(77180-77248)


Alignment Details
Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 12 - 306
Target Start/End: Complemental strand, 7820692 - 7820403
Alignment:
Q  12 gagatgaagagggaagaagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccatt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||    ||    
T  7820692 gagatgaagagggaagaagataaagattgatggtgattttaaatttttatttttaagaaaatcaagaaaaatagaaatgatcatatgtgttgag---ctt 7820596  T
Q  112 gtatacttgtgtattttcaaattaaacccttgatcaccaatctcaaatgacatgtggacaatgattagttgtttttgnnnnnnnnnnncctaacggagag 211  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||            |||||||||||    
T  7820595 gtatacttgtgtattttcaaattaaacccttgatcaccaatcttaaatgacatgtggacaaggattagttgtttttgaaaaaaaaaa--ctaacggagag 7820498  T
Q  212 gaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||| ||||||||||||||||||||||||    
T  7820497 gaccaaaacagtaaacgacataaaatttatgggtccaaattgaaacactttatagttagaggaccaaaatgaaattcaaaaataagttaagggac 7820403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 306
Target Start/End: Complemental strand, 29536999 - 29536727
Alignment:
Q  28 aagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-tt 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| |||||||||||| ||| ||    
T  29536999 aagatgaagattgatggtgattttaaatttttatttttaggaaaat-aaaaaaaattgaaatgatcatatgttgtgagtctattgtatacttgcgtactt 29536901  T
Q  127 ttcaaattaaacccttgatcaccaatctcaaatgacatgtggacaatgattagttgtttttgnnnnnnnnnnncctaacggagaggaccaaaagtgtaaa 226  Q
    |||||||  ||||||||||||| ||||| ||||||||||||||| ||| | |   |||||||            |||||||||||||||||||  |||||    
T  29536900 ttcaaatctaacccttgatcacaaatcttaaatgacatgtggaccatggtaaacagtttttgaaaaag------ctaacggagaggaccaaaatagtaaa 29536807  T
Q  227 cgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||| | || ||||||||| |||| |||| |||||||||||||||| ||||||||| |||| ||||||||||| |||||||    
T  29536806 cgaaagaagatttatgggaccaaattgagacactttatagttagaggatcaaaatgaaatccaaaaataagtcaagggac 29536727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 47854773 - 47854629
Alignment:
Q  28 aagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-tt 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  47854773 aagatgaagattgatggtgattttaaatttttatttttaggaaaat-aaaagaaatagaaatgatcatatgttgtgagtccattgtatacttgcgtactt 47854675  T
Q  127 ttcaaattaaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
    |||||||  || |||||||||| ||||| |||||||||||||||||    
T  47854674 ttcaaatctaatccttgatcacaaatcttaaatgacatgtggacaa 47854629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 52293352 - 52293496
Alignment:
Q  29 agataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttt 127  Q
    |||| |||||||||||||||||||||||| || |||||||||||||||||| |||||||||||| |||||||||||| | |||||||||||||||| |||    
T  52293352 agatgaagattgatggtgattttaaatttataattttaggaaaatcaagaagaatagaaatgattatatgttgtgagcctattgtatacttgtgtacttt 52293451  T
Q  128 tcaaattaaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
    ||||||  | ||||||||||||||||| |||||||||||||||||    
T  52293452 tcaaatatagcccttgatcaccaatcttaaatgacatgtggacaa 52293496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 40 - 178
Target Start/End: Complemental strand, 32973415 - 32973276
Alignment:
Q  40 gatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaattaaac 138  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||| |||||||||  | |    
T  32973415 gatggtgattttaaatttatatttttaggaaaatcaagaaaaatagaaatgattatatgttatgagcccattgtatacttgtgtatttttcaaatctagc 32973316  T
Q  139 ccttgatcaccaatctcaaatgacatgtggacaatgatta 178  Q
    |||||||| |||| || |||||||||||||||||||||||    
T  32973315 ccttgatctccaaccttaaatgacatgtggacaatgatta 32973276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 28 - 154
Target Start/End: Complemental strand, 39287737 - 39287610
Alignment:
Q  28 aagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-tt 126  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||| ||    
T  39287737 aagatgaagattgatggtgattttaaatttatatttttaggaaaatcaagaaaaatagaaatgattatatgttgtgagcccattgtatatttgtgtactt 39287638  T
Q  127 ttcaaattaaacccttgatcaccaatct 154  Q
    |||||||  | |||||||||||||||||    
T  39287637 ttcaaatctagcccttgatcaccaatct 39287610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 35 - 306
Target Start/End: Original strand, 53048872 - 53049140
Alignment:
Q  35 agattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaat 133  Q
    ||||||||||||||||||||||| || |||||||||||| || ||||||||||||||| ||||  |||||| |||||||||||||||||| |||||||||    
T  53048872 agattgatggtgattttaaatttataattttaggaaaataaaaaaaaatagaaatgattatattctgtgagcccattgtatacttgtgtatttttcaaat 53048971  T
Q  134 taaacccttgatcaccaatctcaaatgacatgtggacaatgattagttgtttttgnnnnnnnnnnncctaacggagaggaccaaaagtgtaaacgacata 233  Q
      | ||||||||| |||| || ||||||||||||||||| |||||  | ||||||            |||||||||||||||||||| |  ||||||| |    
T  53048972 ctagcccttgatctccaaccttaaatgacatgtggacaaggattaactatttttgaaaacaaa----ctaacggagaggaccaaaagaggtaacgacaga 53049067  T
Q  234 aaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    | |  || ||| |||| |||| |||||||||||||||  || ||||||||||| | |||||||||||||||||    
T  53049068 agacataagggaccaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaagggac 53049140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 28 - 306
Target Start/End: Complemental strand, 48826101 - 48825825
Alignment:
Q  28 aagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaa-tagaaatgatcatatgttgtgagtccattgtatacttgtgta-t 125  Q
    ||||| ||||||||| ||||||| |||||| ||||||||||||||| || ||||| |||||||||| |||||||||||| |||||||||||||||||| |    
T  48826101 aagatgaagattgatagtgatttcaaatttatatttttaggaaaataaaaaaaaaatagaaatgattatatgttgtgagcccattgtatacttgtgtact 48826002  T
Q  126 tttcaaattaaacccttgatcaccaatctcaaatgacatgtggacaatgattagttgtttttgnnnnnnnnnnncctaacggagaggaccaaaagtgtaa 225  Q
    |||||||   ||||||||||||||||||| ||||||||||||||||| | |||  | ||||||            ||||| ||||| |||||| | |  |    
T  48826001 tttcaaacctaacccttgatcaccaatcttaaatgacatgtggacaagggttaactatttttgaaaacaaa----ctaactgagagtaccaaatgaggta 48825906  T
Q  226 acgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||||| || |  || ||| |||| |||| |||||||||||||||   ||||||||||||||| |||||||||||||||||    
T  48825905 acgacagaagacataagggaccaaattgagacactttatagttagggaatcaaaataaaattcgaaaataagttaagggac 48825825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 172
Target Start/End: Complemental strand, 48034281 - 48034151
Alignment:
Q  35 agattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgtattttcaaatt 134  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||  ||||||||||       |||| ||||     
T  48034281 agattgatggtgattttaaatttatatttttaggaaaatcaagaaaaatagaaatgattgtatgttgtgagctcattgtatac-------tttttaaatc 48034189  T
Q  135 aaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
     ||||||| ||| ||||||| |||||||||||||||||    
T  48034188 taacccttaatctccaatcttaaatgacatgtggacaa 48034151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 11220658 - 11220761
Alignment:
Q  203 aacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaag 302  Q
    ||||||| |||||||||  |||||||||| || |||||| || |||| |||| |||||||||||||||  || |||||| ||||||||||||||||||||    
T  11220658 aacggaggggaccaaaatagtaaacgacagaagatttataggaccaaattgagacactttatagttaggggaccaaaatgaaattcaaaaataagttaag 11220757  T
Q  303 ggac 306  Q
    ||||    
T  11220758 ggac 11220761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 306
Target Start/End: Original strand, 54653963 - 54654069
Alignment:
Q  200 cctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtt 299  Q
    ||||||||||||||||||||  |||||||||| || | ||||||| |||| |||| ||||||||||||||   || |||||| |||| ||||||||||||    
T  54653963 cctaacggagaggaccaaaatagtaaacgacagaagaattatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagtt 54654062  T
Q  300 aagggac 306  Q
    |||||||    
T  54654063 aagggac 54654069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 302
Target Start/End: Original strand, 29537013 - 29537241
Alignment:
Q  78 aaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaattaaacccttgatcaccaatctcaaatgacatgtggacaatgat 176  Q
    ||||| ||||||||||||||||| ||||  |||||| ||||||| || |||||||||  ||| ||||||||||||||| ||||||||||||||||| | |    
T  29537013 aaaaaaagaaatgatcatatgttatgagcacattgtgtacttgtatacttttcaaatctaactcttgatcaccaatcttaaatgacatgtggacaagggt 29537112  T
Q  177 tagttgtttttg---nnnnnnnnnnncctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatg 273  Q
    ||  ||||||||               ||||||||||||||||||| |||||||| || || ||||||||| | || || ||||| |||||| ||||  |    
T  29537113 taactgtttttgaaaaaaaaaaaaaaactaacggagaggaccaaaattgtaaacggcagaagatttatgggacgaaattaaaacattttataattagtag 29537212  T
Q  274 atcaaaataaaattcaaaaataagttaag 302  Q
    || || || |||| |||||||||||||||    
T  29537213 ataaagatgaaatccaaaaataagttaag 29537241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 39287588 - 39287483
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||| |  ||||||| ||||  || ||| |||| |||| |||||||||||||||| || |||||| |||| | |||||||||||    
T  39287588 ctaacggagaggaccaaaagaggtaacgacagaaaacataagggaccaaattgagacactttatagttagaggaccaaaatgaaatccgaaaataagtta 39287489  T
Q  301 agggac 306  Q
    ||||||    
T  39287488 agggac 39287483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 42633884 - 42633989
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||| |||||||||||||   |||||||||||| ||||||||| |||| |||| ||||| |||||||||  || |||| | ||| ||||||||||||||    
T  42633884 ctaacagagaggaccaaaataataaacgacataagatttatgggaccaaattgagacactctatagttaggggaccaaattgaaaatcaaaaataagtta 42633983  T
Q  301 agggac 306  Q
    ||||||    
T  42633984 agggac 42633989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 51825619 - 51825724
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||| | ||||||||  |||||||||| || ||||||||| |||| |||||||||||||||||||   || |||| | |||| |||||||||||||    
T  51825619 ctaacggatatgaccaaaatagtaaacgacagaagatttatgggaccaaattgaaacactttatagttaagggaccaaagtgaaatccaaaaataagtta 51825718  T
Q  301 agggac 306  Q
    ||||||    
T  51825719 agggac 51825724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 47855337 - 47855441
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||  ||||||| || || |||||| || |||| |||| ||||||||||||||   || |||||| |||| ||||||||||||||    
T  47855337 taacggagaggaccaaaatagtaaacggcagaagatttataggaccaaattgagacactttatagttaacggaccaaaatgaaatccaaaaataagttaa 47855436  T
Q  302 gggac 306  Q
    |||||    
T  47855437 gggac 47855441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 10987652 - 10987755
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    |||| |||||||||||||    ||||| ||||||||||||||| |||| |||| |||||||||||||||  || |||||| |||  ||||||||||||||    
T  10987652 taacagagaggaccaaaataaaaaacggcataaaatttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaa 10987751  T
Q  302 ggga 305  Q
    ||||    
T  10987752 ggga 10987755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 32979206 - 32979101
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||| |  ||   || ||||||||||||  ||| |||| |||||||||||||||| || |||||| ||||| |||||| |||||    
T  32979206 ctaacggagaggaccaaaagaggtaattgcagaaaatttatgggatcaaattgagacactttatagttagaggaccaaaatgaaatttaaaaattagtta 32979107  T
Q  301 agggac 306  Q
    ||||||    
T  32979106 agggac 32979101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 42632824 - 42632719
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||| ||||  ||||||||||||| |||||||||  ||| |||| |||||||||||||||  || |||| | |||  ||||| |||||||    
T  42632824 ctaacggagaggactaaaatagtaaacgacataagatttatgggatcaaattgagacactttatagttaggggaccaaattgaaaaccaaaagtaagtta 42632725  T
Q  301 agggac 306  Q
    ||||||    
T  42632724 agggac 42632719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 41386247 - 41386143
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||  ||||||| | ||| ||||||||  |||| |||| |||||||||||||||  || |||| | |||  ||||||||||||||    
T  41386247 taacggagaggaccaaaatagtaaacgtcgtaagatttatggaaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaa 41386148  T
Q  302 gggac 306  Q
    |||||    
T  41386147 gggac 41386143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 36626849 - 36626780
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    |||||| ||||||||||||  ||||||||||||| ||||| ||| |||| ||||||||||| ||||||||    
T  36626849 ctaacgaagaggaccaaaacagtaaacgacataagatttaagggaccaaattgaaacacttcatagttag 36626780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 53808436 - 53808331
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||| ||||| ||||||||  ||||||||||||| ||||||||| |||  |||| |||||||||||||||  || |||| | |||  | |||||||||||    
T  53808436 ctaatggagatgaccaaaatagtaaacgacataagatttatgggaccagattgagacactttatagttaggagaccaaattcaaaaccgaaaataagtta 53808337  T
Q  301 agggac 306  Q
    ||||||    
T  53808336 agggac 53808331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 382191 - 382101
Alignment:
Q  81 aatagaaatgatcatatgttgtgagtccattgtatacttgtgtat---tttcaaattaaacccttgatcaccaatctcaaatgacatgtgg 168  Q
    |||| |||| ||||||||||| ||||| ||||||| ||||||| |   ||| ||||| | |||||||||||||||| ||||||||||||||    
T  382191 aataaaaattatcatatgttgcgagtctattgtatccttgtgtgtgcttttaaaattcagcccttgatcaccaatcacaaatgacatgtgg 382101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 13077950 - 13078050
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||| ||||| ||||||  ||||||||||||| ||||||||| |||| || | ||| |||||| ||||| || |||| | ||| |||||||||||||||    
T  13077950 taacgaagaggtccaaaatagtaaacgacataagatttatgggaccaaattaagacattttatacttagaggaccaaattgaaaatcaaaaataagttaa 13078049  T
Q  302 g 302  Q
    |    
T  13078050 g 13078050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 43103294 - 43103398
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||| ||||||||||  ||||||| || ||||||||||   |||| |||| | | ||| |||||||  ||||||||||||| | ||||||||||||    
T  43103294 ctaacggaaaggaccaaaatagtaaacggcagaaaatttatgaaaccaaattgagatattttgtagttaggggatcaaaataaaaataaaaaataagtta 43103393  T
Q  301 aggga 305  Q
    |||||    
T  43103394 aggga 43103398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 47808105 - 47808209
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||  | |||||||| || ||||||| | |||| |||| ||||||||||||||    | |||| | |||| ||||||||||||||    
T  47808105 taacggagaggaccaaaatagcaaacgacagaagatttatgagaccaaattgagacactttatagttaaggaaccaaagtgaaatccaaaaataagttaa 47808204  T
Q  302 gggac 306  Q
    |||||    
T  47808205 gggac 47808209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 48035323 - 48035427
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||| |  |||| ||||| |  || ||| |||| |||| |||||||||||||||  || |||||| |||| | ||||||||||||    
T  48035323 taacggagaggaccaaaagaggtaacggcataagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaa 48035422  T
Q  302 gggac 306  Q
    |||||    
T  48035423 gggac 48035427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 53048014 - 53047910
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||| |  ||||||| || |  || ||| |||| |||| |||||||||||||||  || |||||| |||| | ||||||||||||    
T  53048014 taacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaa 53047915  T
Q  302 gggac 306  Q
    |||||    
T  53047914 gggac 53047910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 43102010 - 43101907
Alignment:
Q  203 aacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaag 302  Q
    |||||||| || |||||  |||| ||||| || | ||||||| |||| |||| |||||||||| ||||| || |||||| |||  |||||||||||||||    
T  43102010 aacggagatgatcaaaatagtaagcgacagaagaattatgggaccaaattgagacactttataattagaggaccaaaatgaaaaccaaaaataagttaag 43101911  T
Q  303 ggac 306  Q
    ||||    
T  43101910 ggac 43101907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 8372649 - 8372719
Alignment:
Q  236 atttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| |||| |||| |||||||||||||||  || |||||| |||  |||||||||||||||||||    
T  8372649 atttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaagggac 8372719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 11219548 - 11219443
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| ||||||||  ||||||| || || | | ||| | |||| |||| |||||||||||||||  || |||||| |||| |||||||||||||    
T  11219548 ctaacggagatgaccaaaatagtaaacggcagaagactcatgagaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaataagtta 11219449  T
Q  301 agggac 306  Q
    | ||||    
T  11219448 acggac 11219443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 302
Target Start/End: Original strand, 26798904 - 26799005
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  |||||||    || | ||||||| |||| |||| ||| |||||||||||  || ||||||||||  |||||||||||||    
T  26798904 ctaacggagaggaccaaaatggtaaacggaggaagaattatgggaccaaattgagacattttatagttaggggaccaaaataaaaaccaaaaataagtta 26799003  T
Q  301 ag 302  Q
    ||    
T  26799004 ag 26799005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 41387431 - 41387536
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  |||||||   |||  |||||||| |||| |||| ||| |||||||||||  || |||| | |||  |||||||||||||    
T  41387431 ctaacggagaggaccaaaatagtaaacggtgtaaggtttatgggaccaaattgagacattttatagttaggggaccaaattgaaaaccaaaaataagtta 41387530  T
Q  301 agggac 306  Q
    ||||||    
T  41387531 agggac 41387536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 1301105 - 1301045
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| ||||||||||||||   || ||||||||||||| |||||||||||||||||    
T  1301105 ccaaattgagacactttatagttatgggaccaaaataaaattcgaaaataagttaagggac 1301045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 8371338 - 8371234
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  ||||||  || || ||||||||  |||| |||| ||| |||||||||||  || |||||| |||   ||||||||||||    
T  8371338 ctaacggagaggaccaaaatagtaaactgcagaagatttatggaaccaaattgagacattttatagttaggggaccaaaatgaaaacaaaaaataagtta 8371239  T
Q  301 aggga 305  Q
    |||||    
T  8371238 aggga 8371234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 40502270 - 40502318
Alignment:
Q  258 actttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||||||||||||  || ||||||||||| |||||||||||||||||||    
T  40502270 actttatagttaggggaccaaaataaaatccaaaaataagttaagggac 40502318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 48034077 - 48034025
Alignment:
Q  251 ttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagg 303  Q
    |||| |||||||||||||||| || ||||||||||| | ||||||||||||||    
T  48034077 ttgagacactttatagttagaggaccaaaataaaatccgaaaataagttaagg 48034025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 55443593 - 55443653
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||  || |||||| |||||| |||||||||||||||||    
T  55443593 ccaaattgagacactttatagttaggggaccaaaatgaaattcgaaaataagttaagggac 55443653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 33149798 - 33149727
Alignment:
Q  13 agatgaagagggaagaagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaata 84  Q
    |||||||||||||||||||| ||||||  |||| ||||| ||||| || |||||||||| | |||| |||||    
T  33149798 agatgaagagggaagaagatgaagattattggtaatttttaatttgtagttttaggaaatttaagacaaata 33149727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 51400331 - 51400228
Alignment:
Q  203 aacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaag 302  Q
    |||||| ||||||||||  ||| ||| |  |||||||||||| | || |||| |||||||||||||||   |||||| | |||  |||||||||||||||    
T  51400331 aacggaaaggaccaaaatggtatacggctgaaaatttatgggactaaattgagacactttatagttagggaatcaaagtgaaaaccaaaaataagttaag 51400232  T
Q  303 ggac 306  Q
    ||||    
T  51400231 ggac 51400228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 51401371 - 51401454
Alignment:
Q  223 taaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||||| || || ||||||||| |||| |||| |||||||||||||||  || |||| | |||  |||||||||||||||||||    
T  51401371 taaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaagggac 51401454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 9777091 - 9777002
Alignment:
Q  81 aatagaaatgatcatatgttgtgagtccattgtatacttgtgtat--tttcaaattaaacccttgatcaccaatctcaaatgacatgtgg 168  Q
    |||| |||| |||||||||||||| ||||||||| | |||||| |  ||||||||  |||| ||||||| |||||  |||||||||||||    
T  9777091 aatataaattatcatatgttgtgaatccattgtaaatttgtgtgtgctttcaaatccaacctttgatcaacaatcctaaatgacatgtgg 9777002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 306
Target Start/End: Original strand, 30838543 - 30838573
Alignment:
Q  276 caaaataaaattcaaaaataagttaagggac 306  Q
    |||||||||||||||||||||||||||||||    
T  30838543 caaaataaaattcaaaaataagttaagggac 30838573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 303
Target Start/End: Complemental strand, 47806935 - 47806834
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||||||||||||||||| |||||||  || || |||||| ||  ||| |||| |||||||||| |||   || |||||| |||| |||||||||||||    
T  47806935 ctaacggagaggaccaaaa-tgtaaacagcagaagatttataggatcaaattgagacactttataattaagggaccaaaatgaaatccaaaaataagtta 47806837  T
Q  301 agg 303  Q
    |||    
T  47806836 agg 47806834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 49334189 - 49334260
Alignment:
Q  45 tgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtg 122  Q
    ||||||| |||||| |||||||||||| ||||      ||||||| |||||||||||||||| ||||||||| |||||    
T  49334189 tgatttttaattttaatttttaggaaattcaa------tagaaataatcatatgttgtgagttcattgtatatttgtg 49334260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 306
Target Start/End: Original strand, 383046 - 383075
Alignment:
Q  277 aaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||||||||||||||||||||||||    
T  383046 aaaataaaattcaaaaataagttaagggac 383075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 12060873 - 12060784
Alignment:
Q  81 aatagaaatgatcatatgttgtgagtccattgtatacttgtgtattttc-aaattaaacccttgatcaccaatctcaaatgacatgtgga 169  Q
    ||||||||||||||| ||||| ||||  |||||||| ||| ||  |||| ||||| | || |||||||||||||| || |||||||||||    
T  12060873 aatagaaatgatcatctgttgcgagtttattgtatatttgcgtgctttctaaattcagccattgatcaccaatcttaagtgacatgtgga 12060784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Original strand, 12105555 - 12105588
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  12105555 gatcaaaatgaaattcaaaaataagttaagggac 12105588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 13041993 - 13041960
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  13041993 gatcaaaatgaaattcaaaaataagttaagggac 13041960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 13050070 - 13050037
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  13050070 gatcaaaatgaaattcaaaaataagttaagggac 13050037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Original strand, 13997454 - 13997487
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||||||||||||||||||||| ||||||    
T  13997454 gatcaaaataaaattcaaaaataagttgagggac 13997487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 32973257 - 32973152
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||| ||||| |  |||| || || |  || ||| |||| |||| |||||||||||||||  || |||||| |||| | |||||||||||    
T  32973257 ctaacggagaggacaaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagtta 32973158  T
Q  301 agggac 306  Q
    ||||||    
T  32973157 agggac 32973152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 46988390 - 46988357
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  46988390 gatcaaaatgaaattcaaaaataagttaagggac 46988357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 48866376 - 48866335
Alignment:
Q  81 aatagaaatgatcatatgttgtgagtccattgtatacttgtg 122  Q
    ||||||||| || ||||||||||||||||||||||| |||||    
T  48866376 aatagaaataattatatgttgtgagtccattgtatatttgtg 48866335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Original strand, 51213647 - 51213680
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  51213647 gatcaaaatgaaattcaaaaataagttaagggac 51213680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 52293521 - 52293626
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||| |  ||||| | || |  ||  || |||| |||| |||||||||||||||  || |||||| |||| | |||||||||||    
T  52293521 ctaacggagaggaccaaaagaggtaacgatagaagacataaaggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagtta 52293620  T
Q  301 agggac 306  Q
    ||||||    
T  52293621 agggac 52293626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 7822029 - 7822089
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||| ||||  || ||||||||||| ||||| |||||||||||||    
T  7822029 ccaaattgagacactttataattaggagaccaaaataaaatccaaaattaagttaagggac 7822089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 25583231 - 25583127
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    |||| |||||||||||||  ||||||| || || | ||||||| |||| |||| ||  || ||||||||  || |||| | ||| |||||||||||||||    
T  25583231 taacagagaggaccaaaatagtaaacggcagaagacttatgggaccaaattgagacgtttaatagttaggggaccaaagtgaaaatcaaaaataagttaa 25583132  T
Q  302 gggac 306  Q
    |||||    
T  25583131 gggac 25583127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 32974266 - 32974326
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||  || |||||| |||| | |||||||||||||||||    
T  32974266 ccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 32974326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 302
Target Start/End: Original strand, 39288442 - 39288538
Alignment:
Q  206 ggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaag 302  Q
    |||||| |||||||| |  |||||||||| |  || ||| |||| |||| |||||||||||||||  || |||||| |||| | |||||||||||||    
T  39288442 ggagagaaccaaaagagataacgacataagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaag 39288538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 47855278 - 47855310
Alignment:
Q  140 cttgatcaccaatctcaaatgacatgtggacaa 172  Q
    ||||||||||||||| |||||||||||||||||    
T  47855278 cttgatcaccaatcttaaatgacatgtggacaa 47855310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 48253014 - 48252946
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| |||| |||| |||||||||||||||  || ||||||||||   || |||||||||||||||    
T  48253014 ttatgggaccaaattgagacactttatagttaggggaccaaaataaaaacaaagaataagttaagggac 48252946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 51214201 - 51214269
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| |||| |||| ||| |||| |||||   || |||||| ||||||||||||||||||||||||    
T  51214201 ttatgggaccaaattgagacagtttaaagttaagggaccaaaatgaaattcaaaaataagttaagggac 51214269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 7e-80; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 12 - 306
Target Start/End: Original strand, 15446479 - 15446773
Alignment:
Q  12 gagatgaagagggaagaagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccatt 111  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  15446479 gagatgaagagggaagaagatgaagattgaaggtgactttaaatttttatttttaagaaaatcaagaaaaatagaaatgatcatatgttgtgagcccatt 15446578  T
Q  112 gtatacttgtgta-ttttcaaattaaacccttgatcaccaatctcaaatgacatgtggacaatgattagttgtttttgnnnnnnnnnnncctaacggaga 210  Q
    ||||  ||||||| |||| |||| |||||||||||||||||||| ||||||||||||||||| | |||| ||||||||            ||||||||||    
T  15446579 gtatggttgtgtacttttaaaatcaaacccttgatcaccaatcttaaatgacatgtggacaagggttagctgtttttgaaaaagaaaaa-ctaacggaga 15446677  T
Q  211 ggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||||||||  |||||||  | |||||||||||| |||| ||||||||||||||| |||||||| |||||| |||| |||||||||||||||||||    
T  15446678 ggaccaaaatagtaaacggtagaaaatttatgggaccaaattgaaacactttataattagatgaccaaaatgaaatccaaaaataagttaagggac 15446773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 29 - 174
Target Start/End: Original strand, 526548 - 526694
Alignment:
Q  29 agataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttt 127  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||    
T  526548 agatgaagattgatggtgattttaaatttatatttttaggaaaatcaagaaaaatagaaatgattatatgttgtgagcccattgtatacttgtgtacttt 526647  T
Q  128 tcaaattaaacccttgatcaccaatctcaaatgacatgtggacaatg 174  Q
    ||||||| | ||||||||||||||||| ||||||| |||||||||||    
T  526648 tcaaatttagcccttgatcaccaatcttaaatgacgtgtggacaatg 526694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 37 - 168
Target Start/End: Original strand, 29834270 - 29834402
Alignment:
Q  37 attgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaatta 135  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||      
T  29834270 attgatggtgattttaaatttatatttttaggaaaatcaagaaaaataaaaatgattatatgttgtgagtccattgtatacttgtgtacttttcaaatat 29834369  T
Q  136 aacccttgatcaccaatctcaaatgacatgtgg 168  Q
    | ||||||||||||||||| |||||||||||||    
T  29834370 agcccttgatcaccaatcttaaatgacatgtgg 29834402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 29 - 168
Target Start/End: Complemental strand, 29833660 - 29833518
Alignment:
Q  29 agataaagattgatggtgattttaaatttttat--ttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-t 125  Q
    |||| |||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  29833660 agatgaagattgatggtgattttaaatttatatatttttaggaaaatcaagaaaaatagaaatgattatatgttgtgagtccattgtatacttgtgtact 29833561  T
Q  126 tttcaaattaaacccttgatcaccaatctcaaatgacatgtgg 168  Q
    ||||||||  | ||||||||||||||||| || ||||||||||    
T  29833560 tttcaaatctagcccttgatcaccaatcttaattgacatgtgg 29833518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 936504 - 936360
Alignment:
Q  29 agataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttt 127  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||| || |||||||||||| |||||||||||| | |||||||||||||||| |||    
T  936504 agatgaagattgatggtgattttaaatttatatttttaggaaaatcaataagaatagaaatgattatatgttgtgagcctattgtatacttgtgtacttt 936405  T
Q  128 tcaaattaaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
    ||||||  |    |||||||||||||| |||||||||||||||||    
T  936404 tcaaatctagttgttgatcaccaatcttaaatgacatgtggacaa 936360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 53150705 - 53150546
Alignment:
Q  12 gagatgaagagggaagaagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccatt 111  Q
    |||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||      
T  53150705 gagatgaagaggaaagaagataaagattgatggtgatttattatttttatttttaggaaaatcaagaaaaatataaattatcatatgttgtgagtcca-c 53150607  T
Q  112 gtatacttgtgt-attttcaaattaaacccttgatcaccaatctcaaatgacatgtggaca 171  Q
    |||| || ||||  |||||||||  ||||||||||| | ||||| |||||||| |||||||    
T  53150606 gtatcctggtgtgtttttcaaatccaacccttgatcgctaatcttaaatgacacgtggaca 53150546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 30671904 - 30672038
Alignment:
Q  29 agataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttt 127  Q
    |||| |||||||||||||||||||||||| |||||||||          |||||||||||| || |||||||||||| |||||||||| ||||||| |||    
T  30671904 agatgaagattgatggtgattttaaatttatatttttag----------aaaaatagaaattattatatgttgtgagcccattgtatatttgtgtacttt 30671993  T
Q  128 tcaaattaaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
    ||||||  | ||||||||||||||||| |||| ||||||||||||    
T  30671994 tcaaatctagcccttgatcaccaatcttaaataacatgtggacaa 30672038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 33377362 - 33377467
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  ||||||| || || ||||||||| |||| |||| |||||||||||||||  || |||| | ||| ||||||||||||||    
T  33377362 ctaacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatcaaaaataagtta 33377461  T
Q  301 agggac 306  Q
    ||||||    
T  33377462 agggac 33377467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 44302838 - 44302733
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||| |  || | || ||||||||||||  ||| |||| ||||||||||||||||||| ||| || |||||||||||| |||||    
T  44302838 ctaacggagaggaccaaaagaggtaatggcagaaaatttatgggatcaaattgagacactttatagttagatgaccaatatgaaattcaaaaattagtta 44302739  T
Q  301 agggac 306  Q
    ||||||    
T  44302738 agggac 44302733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 53400488 - 53400391
Alignment:
Q  12 gagatgaagagggaagaagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtcca 109  Q
    |||||||||||| |||||||| ||||||||| |||||| | || ||||||||| ||| |||| | ||||||||||||| |||| ||||||||||||||    
T  53400488 gagatgaagaggaaagaagatgaagattgatagtgattgttaacttttattttgagggaaattaggaaaaatagaaattatcacatgttgtgagtcca 53400391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 300
Target Start/End: Complemental strand, 35787914 - 35787815
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  |||||||||| || ||||||||| |||| |||||||| |||||||||||| || |||| | |||  |||||||||||||    
T  35787914 ctaacggagaggaccaaaacggtaaacgacagaagatttatgggaccaaattgaaacattttatagttagaggaccaaagtgaaaaccaaaaataagtta 35787815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 1273431 - 1273535
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  | ||||||||||| | ||||||| |||| |||| |||||||||||||||  || |||| |||||  |||||||||||||    
T  1273431 ctaacggagaggaccaaaatagcaaacgacataagacttatgggaccaaattgagacactttatagttaggggaccaaattaaaa-ccaaaaataagtta 1273529  T
Q  301 agggac 306  Q
    ||||||    
T  1273530 agggac 1273535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 26393146 - 26393230
Alignment:
Q  222 gtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||||||||| || | ||||||| |||| |||| |||||||||||||| | ||||||||||||| | ||||||||||||||||||    
T  26393146 gtaaacgacagaagagttatgggaccaaattgagacactttatagttaaaggatcaaaataaaaataaaaaataagttaagggac 26393230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 31711208 - 31711105
Alignment:
Q  203 aacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaag 302  Q
    |||||| |||| |||||  ||||||||||||| | ||||| | |||| |||| |||||||||||||| | || |||||| |||| |||||||||||||||    
T  31711208 aacggaaaggatcaaaatggtaaacgacataagacttatgagaccaaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataagttaag 31711109  T
Q  303 ggac 306  Q
    ||||    
T  31711108 ggac 31711105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 53400303 - 53400200
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||| ||||  ||||||||||||| |||||| || |||| |||| ||||||||||||||   || |||||| ||||  ||||||||||||    
T  53400303 ctaacggagaggactaaaatggtaaacgacataagatttataggaccaaattgagacactttatagttatgggaccaaaatgaaatctaaaaataagtta 53400204  T
Q  301 aggg 304  Q
    ||||    
T  53400203 aggg 53400200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 38370400 - 38370295
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| ||||||||  |||||||||| || | ||||| | |||| |||| ||||||||| ||||||||| |||| | ||| | ||||||||||||    
T  38370400 ctaacggagatgaccaaaatggtaaacgacagaagagttatgagaccaaattgatacactttatcgttagatgaccaaattgaaaatgaaaaataagtta 38370301  T
Q  301 agggac 306  Q
    ||||||    
T  38370300 agggac 38370295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 37560298 - 37560402
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    |||||||||||||||| |  ||||||| | ||| ||||||||| |||| |||| |||||||||||||||  || |||| | |||  ||||||||||||||    
T  37560298 taacggagaggaccaagatagtaaacgtcgtaagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagttaa 37560397  T
Q  302 gggac 306  Q
    |||||    
T  37560398 gggac 37560402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 5688635 - 5688704
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    |||||||||| ||||||||  ||||||||||||| ||||||||  |||| |||| |||||||||||||||    
T  5688635 ctaacggagatgaccaaaatagtaaacgacataagatttatggaaccaaattgagacactttatagttag 5688704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 23153062 - 23153135
Alignment:
Q  13 agatgaagagggaagaagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaataga 86  Q
    ||||||||||| | |||||| ||||||| |  ||||||| ||||||||||||||||||| |||||| |||||||    
T  23153062 agatgaagaggaaggaagatgaagattgttactgatttttaatttttatttttaggaaattcaagagaaataga 23153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 3217607 - 3217711
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||| ||||||||||  |||||| ||| || ||||||| |  ||| || |||||||||| ||||| | || |||| | ||||||||||||||||||    
T  3217607 ctaacggataggaccaaaatagtaaacaacagaagatttatgagatcaaattaaaacactttaaagttaaaggaccaaagtgaaattcaaaaataagtta 3217706  T
Q  301 aggga 305  Q
    |||||    
T  3217707 aggga 3217711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 38417671 - 38417603
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta 269  Q
    ||||||||||||||| |||  ||||||||||||| ||||||||| |||| |||| |||||| |||||||    
T  38417671 ctaacggagaggaccgaaatagtaaacgacataagatttatgggaccaaattgacacacttaatagtta 38417603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 55953850 - 55953954
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||||| |||||||||||  ||||||| ||||| ||||| ||| |||| |||| ||| ||||||||||   || |||| | ||| ||||||||||||||    
T  55953850 ctaacggggaggaccaaaatagtaaacggcataagatttacgggaccaaattgagacattttatagttatgggaccaaattgaaaatcaaaaataagtta 55953949  T
Q  301 aggga 305  Q
    |||||    
T  55953950 aggga 55953954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 28103486 - 28103589
Alignment:
Q  203 aacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaag 302  Q
    |||||| ||||||||||  ||||||| || ||   ||||||| |||| |||| ||||||||||||||   || |||||| |||| |||||||||||||||    
T  28103486 aacggaaaggaccaaaatggtaaacggcagaagtcttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaag 28103585  T
Q  303 ggac 306  Q
    ||||    
T  28103586 ggac 28103589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 53177051 - 53177121
Alignment:
Q  236 atttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||| ||| |||| |||| ||| |||| |||||| |||||||| | ||||||||||||||||||||||||    
T  53177051 atttaggggaccaaattgagacagtttaaagttaggtgatcaaattgaaattcaaaaataagttaagggac 53177121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 303
Target Start/End: Complemental strand, 55952935 - 55952841
Alignment:
Q  209 gaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagg 303  Q
    |||||||||||   |||||||||||| | ||||| | |||| ||||||||||||||||||||  ||  ||| ||||| |||||||||| ||||||    
T  55952935 gaggaccaaaataataaacgacataagagttatgagaccaaattgaaacactttatagttaggggactaaattaaaaatcaaaaataaattaagg 55952841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 56000355 - 56000301
Alignment:
Q  251 ttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaaggga 305  Q
    |||| |||||||||||||||  ||||||||| ||| |||||||||||||||||||    
T  56000355 ttgagacactttatagttaggggatcaaaatgaaaatcaaaaataagttaaggga 56000301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 11094644 - 11094539
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||| ||||||||||||  ||||||| || ||||||||| || |||| || | |||||||||||||||  || |||| |||||  ||||||||| |||    
T  11094644 ctaacgaagaggaccaaaacagtaaacggcagaaaatttataggaccaaattaagacactttatagttaggagaccaaagtaaaaaccaaaaataaatta 11094545  T
Q  301 agggac 306  Q
    | ||||    
T  11094544 aaggac 11094539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 11114978 - 11115083
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||| ||||||  |||||||||| || | ||||||| |||| |||| | |||||||||||||  || |||||| |||    |||||||||||    
T  11114978 ctaacggagaggtccaaaatggtaaacgacagaagagttatgggaccaaattgagatactttatagttaggggaccaaaatgaaaactgaaaataagtta 11115077  T
Q  301 agggac 306  Q
    ||||||    
T  11115078 agggac 11115083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 303
Target Start/End: Original strand, 15787505 - 15787602
Alignment:
Q  206 ggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagg 303  Q
    ||||||||||||||  ||||||| || |||| ||||||| |||| |||| |||||||||||||||  || |||||| |||   |||||||| ||||||    
T  15787505 ggagaggaccaaaatggtaaacggcaaaaaagttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaacaaaaaataaattaagg 15787602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 29833490 - 29833385
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||| |  ||||||| || || || ||| |||| |||| ||| |||||| ||||  || |||||| |||| | |||||||||||    
T  29833490 ctaacggagaggaccaaaagaggtaacgacaaaagatataagggaccaaattgagacattttataattaggggaccaaaatgaaatccgaaaataagtta 29833391  T
Q  301 agggac 306  Q
    ||||||    
T  29833390 agggac 29833385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 30683025 - 30683130
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| |||||||||  | |||| |  || ||||||||| |||| |||| ||||||||||||||   || |||||| ||| |||||||||| |||    
T  30683025 ctaacggagaagaccaaaagaattaacggccgaagatttatgggaccaaattgagacactttatagttaagggaccaaaatgaaaatcaaaaataaatta 30683124  T
Q  301 agggac 306  Q
    ||||||    
T  30683125 agggac 30683130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 44128332 - 44128437
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  ||||||| ||||| |||||  || | || |||| |||||||||||||||  || |||| | ||| | ||||||||||||    
T  44128332 ctaacggagaggaccaaaatagtaaacggcataagatttaaaggactaaattgagacactttatagttaggggaccaaattgaaaatgaaaaataagtta 44128431  T
Q  301 agggac 306  Q
    | ||||    
T  44128432 aaggac 44128437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 46796024 - 46796129
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||| ||  |||||||    || | ||||||| |||| |||| |||||||||||||||  || |||||| |||  |||||||||||||    
T  46796024 ctaacggagaggaccacaatagtaaacggaggaagacttatgggaccaaattgagacactttatagttaggggaccaaaattaaaaccaaaaataagtta 46796123  T
Q  301 agggac 306  Q
    ||||||    
T  46796124 agggac 46796129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 19049915 - 19049975
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||| ||||  ||||||||| |||| |||||||||||||||||||    
T  19049915 ccaaattgagacactttataattaggggatcaaaatgaaatccaaaaataagttaagggac 19049975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 33376335 - 33376267
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    ||||||||||||| ||||  |||||||||| || ||||||||| |||| |||| |||||||||| ||||    
T  33376335 taacggagaggactaaaatagtaaacgacagaagatttatgggaccaaattgagacactttataattag 33376267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 172
Target Start/End: Original strand, 40146514 - 40146606
Alignment:
Q  81 aatagaaatgatcatatgttgtgagtccattgtatacttgtgtattttc-aaattaaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
    ||||||||| ||||||||||||| |||||||||||| |||||   || | ||||  | ||||||||||| || || |||||||||||||||||    
T  40146514 aatagaaataatcatatgttgtgcgtccattgtatatttgtgcgcttgctaaatccagcccttgatcactaaacttaaatgacatgtggacaa 40146606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 40146658 - 40146726
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| |||| |||| |||||||||||||| | || ||||||||||  |||||||| ||||||||||    
T  40146658 ttatgggaccaaattgagacactttatagttaaaggaccaaaataaaaaccaaaaatacgttaagggac 40146726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 5687292 - 5687225
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta 269  Q
    ||||||||| ||||||||  ||||||| || || ||||||||| |||| |||| ||||||||||||||    
T  5687292 taacggagatgaccaaaatagtaaacggcaaaagatttatgggaccaaattgagacactttatagtta 5687225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 47606411 - 47606454
Alignment:
Q  15 atgaagagggaagaagataaagattgatggtgattttaaatttt 58  Q
    |||||||||||||||||| ||||||| |||||||||| ||||||    
T  47606411 atgaagagggaagaagatgaagattgttggtgatttttaatttt 47606454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 304
Target Start/End: Original strand, 3533651 - 3533709
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaaggg 304  Q
    |||| |||| ||||||||||||||| ||||| |||| ||| | ||||||||||||||||    
T  3533651 ccaaattgagacactttatagttaggtgatcgaaatgaaaattaaaaataagttaaggg 3533709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 27408846 - 27408776
Alignment:
Q  236 atttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| |||| |||| ||||||||||||||||||| |||| | |||    |||||||||||||||||    
T  27408846 atttatgggaccaaattgagacactttatagttagatgaccaaattgaaaactgaaaataagttaagggac 27408776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Original strand, 56297749 - 56297782
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  56297749 gatcaaaatgaaattcaaaaataagttaagggac 56297782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 2310825 - 2310885
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| ||| |||||||||||  || |||||| |||||| |||||||||||||||||    
T  2310825 ccaaattgagacattttatagttaggggaccaaaatgaaattcgaaaataagttaagggac 2310885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 12396917 - 12396977
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||  || |||||| |||| | |||||||||||||||||    
T  12396917 ccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 12396977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 15445509 - 15445449
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||| ||||  || |||||| |||| |||||||||||||||||||    
T  15445509 ccaaattgagacactttataattaggggaccaaaatgaaatccaaaaataagttaagggac 15445449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 17319160 - 17319092
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta 269  Q
    ||||||| || ||||||||  ||||||| || || ||||||||  |||| |||||||||||||||||||    
T  17319160 ctaacggtgaagaccaaaatagtaaacgccagaagatttatggaaccaaattgaaacactttatagtta 17319092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 26202421 - 26202489
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| |||| |||| ||| |||| |||||   || |||||| ||||||||||||||||||||||||    
T  26202421 ttatgggaccaaattgagacagtttaaagttaagggaccaaaatgaaattcaaaaataagttaagggac 26202489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 29686373 - 29686269
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||| |  |||||||||| |  || ||| |||| |||| ||| ||||||||||   || |||| | |||  ||||||||||||||    
T  29686373 taacggagaggaccaaaagaggtaacgacataagacataagggaccaatttgagacaatttatagttaagggaccaaagtgaaaaccaaaaataagttaa 29686274  T
Q  302 gggac 306  Q
    |||||    
T  29686273 gggac 29686269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 34438524 - 34438456
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta 269  Q
    ||||| ||||| |||||||  ||||||| || || ||||||||| |||| |||| ||||||||||||||    
T  34438524 ctaacagagagaaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagtta 34438456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 44126716 - 44126609
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttg--aaacactttatagttagatgatcaaaataaaattcaaaaataagt 298  Q
    ||||| |||| ||||||||  ||||||| ||||| ||||| ||| |||| |||  | || ||||||||||||| || |||| | ||| | ||||||||||    
T  44126716 ctaacagagaagaccaaaatagtaaacggcataagatttaagggaccaaattgtgagactctttatagttagaagaccaaattgaaaatgaaaaataagt 44126617  T
Q  299 taagggac 306  Q
    ||||||||    
T  44126616 taagggac 44126609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 47667251 - 47667192
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||| || ||||||||||  |||||||||||||| ||||    
T  47667251 ccaaattgagacactttatagttaga-gaccaaaataaaaaccaaaaataagttaaaggac 47667192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 1e-56; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 28 - 306
Target Start/End: Original strand, 43935969 - 43936243
Alignment:
Q  28 aagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-tt 126  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||    
T  43935969 aagatgaagattgatggtgattttaaatttatatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagctcattgtatacttgtgtactt 43936068  T
Q  127 ttcaaattaaacccttgatcaccaatctcaaatgacatgtggacaa-tgattagttgtttttgnnnnnnnnnnncctaacggagaggaccaaaagtgtaa 225  Q
    |||||||  |||| ||||||| |||| | ||||||||||||||||| || |||  ||||||||            |||||||||||||||||||  ||||    
T  43936069 ttcaaatctaaccattgatcatcaattttaaatgacatgtggacaattggttaactgtttttgaaaaaa------ctaacggagaggaccaaaatagtaa 43936162  T
Q  226 acgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||||| || | ||||| | |||| || | | |||||||||||||| || |||||| |||| |||||||||||||||||||    
T  43936163 acgacagaagaattatgagaccaaattaagaaactttatagttagaggaccaaaatgaaatccaaaaataagttaagggac 43936243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 28 - 306
Target Start/End: Original strand, 36673664 - 36673939
Alignment:
Q  28 aagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-tt 126  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| ||    
T  36673664 aagatgaagattgatggtgattttaaatttatatttttaggaaaatcaagaaaaatataaatgattatatgttgtgagcccattgtatacttgtgtactt 36673763  T
Q  127 ttcaaattaaacccttgatcaccaatctcaaatgacatgtggacaatgattagttgtttttgnnnnnnnnnnncctaacggagaggaccaaaagtgtaaa 226  Q
    ||||||   | ||||||||||||||||| ||||||||||||||||| |||||  | ||||||            ||||| |||||||||||||| |  ||    
T  36673764 ttcaaacctagcccttgatcaccaatcttaaatgacatgtggacaaggattaactatttttgaaaacaaa----ctaactgagaggaccaaaagaggtaa 36673859  T
Q  227 cgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||| || |  || ||| |||| |||| ||| |||||||||||  || ||||||||||| | |||||||||||||||||    
T  36673860 cgacagaagacataagggaccaaattgagacattttatagttaggggaccaaaataaaatccgaaaataagttaagggac 36673939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 29 - 174
Target Start/End: Complemental strand, 41126526 - 41126380
Alignment:
Q  29 agataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttt 127  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||| |||    
T  41126526 agatgaagattgatggtgattttaaatttatatttttaggaaaatcaagaaaaatagaaatgattatatgttgtgagcctattgtatacttgtgtacttt 41126427  T
Q  128 tcaaattaaacccttgatcaccaatctcaaatgacatgtggacaatg 174  Q
    ||||||  | ||||||||||||||||| |||||||||||||||||||    
T  41126426 tcaaatctagcccttgatcaccaatcttaaatgacatgtggacaatg 41126380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 29 - 168
Target Start/End: Complemental strand, 30222932 - 30222792
Alignment:
Q  29 agataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttt 127  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  30222932 agatgaagattgatggtgattttaaatttatatttttaggaaaatcaagaaaaatagaaatgattatatgttgtgagtccattgtatacttgtgtacttt 30222833  T
Q  128 tcaaattaaacccttgatcaccaatctcaaatgacatgtgg 168  Q
    ||||||  |  |||||||||||||||| |||||||||||||    
T  30222832 tcaaatctagtccttgatcaccaatcttaaatgacatgtgg 30222792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 29 - 168
Target Start/End: Original strand, 30223806 - 30223946
Alignment:
Q  29 agataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttt 127  Q
    |||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  30223806 agatgaagattgatgatgattttaaatttatatttttaggaaaatcaagaaaaatagaaatgattatatgttgtgagtccattgtatacttgtgtacttt 30223905  T
Q  128 tcaaattaaacccttgatcaccaatctcaaatgacatgtgg 168  Q
    ||||||  | ||||||||||||||||| |||||||||||||    
T  30223906 tcaaatctagcccttgatcaccaatcttaaatgacatgtgg 30223946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 41618328 - 41618473
Alignment:
Q  29 agataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttt 127  Q
    |||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||    
T  41618328 agatgaagattgatggtgattttaaatttatatttttaagaaaatcaagaaaaatagaaatgattatatgttgtgagcccattgtatacttgtgtacttt 41618427  T
Q  128 tcaaattaaacccttgatcaccaatctcaaatgacatgtggacaat 173  Q
    ||||||  ||||||||||||||||||| |||||  |||||||||||    
T  41618428 tcaaatctaacccttgatcaccaatcttaaatgcaatgtggacaat 41618473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 28 - 305
Target Start/End: Complemental strand, 47163436 - 47163167
Alignment:
Q  28 aagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-tt 126  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  47163436 aagataaagattgatggtg--tttaaatttttatttttaggaaaattaa-aaaaatagaaatgatcatatgttgtgagtccattgtatacttgcgtactt 47163340  T
Q  127 ttcaaattaaacccttgatcaccaatctcaaatgacatgtggacaatgattagttgtttttgnnnnnnnnnnncctaacggagaggaccaaaagtgtaaa 226  Q
    |||||||  || | |||||||| ||||| ||||||||||||||||| | |||    ||||||            |||||||||||||||||||  |||||    
T  47163339 ttcaaatctaatctttgatcacaaatcttaaatgacatgtggacaagggttaacaatttttgaaaaaa------ctaacggagaggaccaaaatagtaaa 47163246  T
Q  227 cgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaaggga 305  Q
    ||  | || ||||||||| |||| || |  ||||||||||||||| || ||||||||||| ||||||||| ||||||||    
T  47163245 cggaaaaagatttatgggaccaaattaaggcactttatagttagaggaccaaaataaaatccaaaaataaattaaggga 47163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 28 - 172
Target Start/End: Original strand, 2903875 - 2904020
Alignment:
Q  28 aagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgt-att 126  Q
    ||||| ||||||||||||||| |||||||| ||||||||| |||||||||||||||| ||||||| |||||||||||| ||||||||||||||||| |||    
T  2903875 aagatgaagattgatggtgatgttaaatttatatttttagaaaaatcaagaaaaatataaatgattatatgttgtgagcccattgtatacttgtgtaatt 2903974  T
Q  127 ttcaaattaaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
    |||||||| |  | |||||||||||||| |||||||||| ||||||    
T  2903975 ttcaaatttagtcattgatcaccaatcttaaatgacatgcggacaa 2904020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 48754298 - 48754201
Alignment:
Q  12 gagatgaagagggaagaagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtcca 109  Q
    |||||||||||| |||||||| || |||||| |||||||| |||||||||||| |||||||| ||||||||||||||| |||||||||||| ||||||    
T  48754298 gagatgaagaggaaagaagatgaatattgatagtgatttttaatttttattttcaggaaaattaagaaaaatagaaattatcatatgttgtcagtcca 48754201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 43935451 - 43935329
Alignment:
Q  56 ttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaattaaacccttgatcaccaatct 154  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| |||| ||||  ||||||||||||| |||||    
T  43935451 tttttttttcaggaaaatcaagaaaaatagaaatgatcatatgtt-tgagttcattgtatccttgtgtactttttaaatctaacccttgatcacaaatct 43935353  T
Q  155 caaatgacatgtggacaatgatta 178  Q
       |||||||||||| || |||||    
T  43935352 ttgatgacatgtggataaagatta 43935329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 7347032 - 7347129
Alignment:
Q  12 gagatgaagagggaagaagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtcca 109  Q
    |||||||||||| |||||||| ||||||||| |||||  | || ||||||||| |||||||| | ||||||||||||| |||||||||||||||||||    
T  7347032 gagatgaagaggaaagaagatgaagattgatagtgatggttaacttttattttcaggaaaattaggaaaaatagaaattatcatatgttgtgagtcca 7347129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 7148056 - 7148161
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||||||||| |||||||  ||||||||||||| ||||| ||| |||| |||||||||||||||||||||||| |||| | |||    |||||||||||    
T  7148056 ctaacggagagaaccaaaacagtaaacgacataagatttaagggaccaaattgaaacactttatagttagatgaccaaattgaaaacagaaaataagtta 7148155  T
Q  301 agggac 306  Q
    ||||||    
T  7148156 agggac 7148161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 19279610 - 19279715
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||| ||||||||||  |||||||||| |||||||||||| |||| |||| |||||||||||||||  || |||| | |||  |||||||||||||    
T  19279610 ctaacggaaaggaccaaaatagtaaacgacaaaaaatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagtta 19279709  T
Q  301 agggac 306  Q
    ||||||    
T  19279710 agggac 19279715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 22744863 - 22744759
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||| ||||||||  ||||||| ||||| |||||| || |||| ||||||||||||||||||||  ||  ||| | ||| |||||||||||||||    
T  22744863 taacggagaagaccaaaatagtaaacggcataagatttataggaccaaattgaaacactttatagttaggggactaaattgaaaatcaaaaataagttaa 22744764  T
Q  302 gggac 306  Q
    |||||    
T  22744763 gggac 22744759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 18801298 - 18801228
Alignment:
Q  236 atttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| |||| |||| |||||||||||||||  || |||||| ||||||||||||||||||||||||    
T  18801298 atttatgggaccaaattgagacactttatagttaggggaccaaaatgaaattcaaaaataagttaagggac 18801228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 43007647 - 43007745
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtt 299  Q
    ||||||||||| || ||||  ||||||||||||| | ||||||| |||| |||| |||||||||||||||| || |||| | ||| |||||||||||||    
T  43007647 ctaacggagagaactaaaatagtaaacgacataagacttatgggaccaaattgagacactttatagttagaggaccaaattgaaaatcaaaaataagtt 43007745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 38001577 - 38001517
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| ||||||||||||||||||||| || |||||| |||||| |||||||||||||||||    
T  38001577 ccaaattgaaacactttatagttagaggaccaaaatgaaattcgaaaataagttaagggac 38001517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 40926518 - 40926622
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||  |||||||  | ||||||||| || |||| |||| |||||||||||||||  || |||| | |||  ||||||||||||||    
T  40926518 taacggagaggaccaaaacggtaaacggtagaaaatttataggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaa 40926617  T
Q  302 gggac 306  Q
    |||||    
T  40926618 gggac 40926622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 43935282 - 43935198
Alignment:
Q  222 gtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| || || ||||||| | |||| |||| |||||||||||||||| || |||||| |||| |||||||||||||||||||    
T  43935282 gtaaacggcagaagatttatgagaccaaattgagacactttatagttagaggaccaaaatgaaatccaaaaataagttaagggac 43935198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 46674933 - 46675036
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||  ||||||| || || ||||||||| |||| | || ||||||||||||||   ||||||| | |||  ||||||||||||||    
T  46674933 taacggagaggaccaaaatagtaaacggcaaaagatttatgggaccaaatcgagacactttatagttaagggatcaaattgaaaaccaaaaataagttaa 46675032  T
Q  302 ggga 305  Q
    ||||    
T  46675033 ggga 46675036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 300
Target Start/End: Complemental strand, 48754114 - 48754015
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||| ||||  ||||||||||||| |||||| || | || ||||||||||||||| |||   || |||||||||||  ||||||||||||    
T  48754114 ctaacggagaggactaaaatggtaaacgacataagatttataggactaaattgaaacactttataattatgggaccaaaataaaatctaaaaataagtta 48754015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 306
Target Start/End: Complemental strand, 19278472 - 19278366
Alignment:
Q  200 cctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtt 299  Q
    ||||||| ||||||||||||  ||||||| || || | ||||||| |||| |||| |||||||||| |||   || |||||| |||| ||||||||||||    
T  19278472 cctaacgaagaggaccaaaatagtaaacggcagaagaattatgggaccaaattgagacactttataattaagggaccaaaatgaaatccaaaaataagtt 19278373  T
Q  300 aagggac 306  Q
    |||||||    
T  19278372 aagggac 19278366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 13446447 - 13446392
Alignment:
Q  251 ttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| ||||||||||||||||  | |||||||||||||||||||||||||| ||||    
T  13446447 ttgagacactttatagttagagaaccaaaataaaattcaaaaataagttaaaggac 13446392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 19848867 - 19848937
Alignment:
Q  236 atttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| |||| |||| ||||||||||||||   || |||||| |||| |||||||||||||||||||    
T  19848867 atttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggac 19848937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 7347218 - 7347323
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||  ||||  ||||||||||||| |||||| || |||| |||| |||||||||| |||    | |||||||||||  |||| |||||||    
T  7347218 ctaacggagaggattaaaatggtaaacgacataagatttataggaccaaattgagacactttataattatggaaccaaaataaaatctaaaattaagtta 7347317  T
Q  301 agggac 306  Q
    ||||||    
T  7347318 agggac 7347323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 306
Target Start/End: Original strand, 18802419 - 18802492
Alignment:
Q  233 aaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||||||||||| | || |||| |||||||||||||||  ||||||||| |||   ||||||||||||||||||    
T  18802419 aaaatttatgggactaaattgagacactttatagttaggggatcaaaatgaaaacaaaaaataagttaagggac 18802492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 22746318 - 22746387
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    ||||||||||||| |||||  ||||||| || || ||||||||| |||| |||| |||||||||||||||    
T  22746318 ctaacggagaggatcaaaatagtaaacggcacaagatttatgggaccaaattgagacactttatagttag 22746387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 14206791 - 14206687
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| || |||||  |||||||||| || |||||| || |||| |||||||| |||||||||||  || |||| | |||  ||||||||| |||    
T  14206791 ctaacggagatgagcaaaatagtaaacgacagaagatttataggaccaaattgaaacattttatagttaggcgaccaaagtgaaaaccaaaaataaatta 14206692  T
Q  301 aggga 305  Q
    |||||    
T  14206691 aggga 14206687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 14215481 - 14215377
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| || |||||  |||||||||| || |||||| || |||| |||||||| |||||||||||  || |||| | |||  ||||||||| |||    
T  14215481 ctaacggagatgagcaaaatagtaaacgacagaagatttataggaccaaattgaaacattttatagttaggcgaccaaagtgaaaaccaaaaataaatta 14215382  T
Q  301 aggga 305  Q
    |||||    
T  14215381 aggga 14215377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 33459578 - 33459646
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| |||| |||| |||||||||||||||| || |||||| |||  ||||||||||||| |||||    
T  33459578 ttatgggaccaaattgagacactttatagttagaggaccaaaatgaaaaccaaaaataagttatgggac 33459646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 41126356 - 41126252
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||| |  ||||||| || |  || ||| |||| |||| |||||||||||||||  || |||||| ||||   ||||||||||||    
T  41126356 taacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatctgaaaataagttaa 41126257  T
Q  302 gggac 306  Q
    |||||    
T  41126256 gggac 41126252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 43930436 - 43930332
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    |||| |||||||||||||  |||||||||| || |||||| || |||| |||| ||  || ||||||||  || |||| | ||| |||||||||||||||    
T  43930436 taacagagaggaccaaaatagtaaacgacagaagatttataggaccaaattgagacgtttaatagttaggggaccaaagtgaaaatcaaaaataagttaa 43930337  T
Q  302 gggac 306  Q
    |||||    
T  43930336 gggac 43930332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 35088010 - 35088065
Alignment:
Q  251 ttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| ||| |||| ||||| | || |||||||||||||||||||||||||||||||    
T  35088010 ttgagacagtttaaagttaaaagaccaaaataaaattcaaaaataagttaagggac 35088065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 46458713 - 46458816
Alignment:
Q  203 aacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaag 302  Q
    |||||||||||||||||  |||||||  | || ||||||||| |||| |||| ||||||||||||||   || |||| | ||| |||||||| | |||||    
T  46458713 aacggagaggaccaaaatggtaaacggaagaagatttatgggaccaaattgagacactttatagttaagggaccaaattgaaaatcaaaaattacttaag 46458812  T
Q  303 ggac 306  Q
    ||||    
T  46458813 ggac 46458816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 48755596 - 48755651
Alignment:
Q  251 ttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| ||| |||||||||| | || |||||| ||||||||||||||||||||||||    
T  48755596 ttgagacattttatagttataggaccaaaatgaaattcaaaaataagttaagggac 48755651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 306
Target Start/End: Complemental strand, 1884283 - 1884253
Alignment:
Q  276 caaaataaaattcaaaaataagttaagggac 306  Q
    |||||||||||||||||||||||||||||||    
T  1884283 caaaataaaattcaaaaataagttaagggac 1884253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 25153741 - 25153671
Alignment:
Q  236 atttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| |||| |||| |||||||||||||||  || |||| | ||| || |||||||||||||||||    
T  25153741 atttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatcgaaaataagttaagggac 25153671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 34557826 - 34557788
Alignment:
Q  29 agataaagattgatggtgattttaaatttttatttttag 67  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  34557826 agatgaagattgatggtgattttaaatttatatttttag 34557788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 38779040 - 38778990
Alignment:
Q  256 acactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||||||||||||||  || |||||| ||||||||||||| ||||||||||    
T  38779040 acactttatagttaggggaccaaaatgaaattcaaaaatatgttaagggac 38778990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 7146897 - 7146829
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    |||| ||||||||||||||  ||||| ||||||| ||||| ||  |||| ||||||||||||||||||||    
T  7146897 ctaatggagaggaccaaaacagtaaatgacataagatttaagga-ccaaattgaaacactttatagttag 7146829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 10338233 - 10338200
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  10338233 gatcaaaatgaaattcaaaaataagttaagggac 10338200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 302
Target Start/End: Complemental strand, 22060581 - 22060480
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| ||||||||  ||||||| ||||| | || |||  |||| |||| |||||||||||||||| || |||| |||||    |||||||||||    
T  22060581 ctaacggagatgaccaaaatagtaaacggcataagacttgtggaaccaaattgagacactttatagttagaggaccaaattaaaaacacaaaataagtta 22060482  T
Q  301 ag 302  Q
    ||    
T  22060481 ag 22060480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 32610730 - 32610697
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  32610730 gatcaaaatgaaattcaaaaataagttaagggac 32610697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 33229453 - 33229420
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||||||||||||||||||||| ||||||    
T  33229453 gatcaaaataaaattcaaaaataagttgagggac 33229420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 34557470 - 34557413
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagg 303  Q
    |||| |||| |||||||||||||||  || ||||||||||| | ||||||||||||||    
T  34557470 ccaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaagg 34557413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 35087428 - 35087493
Alignment:
Q  234 aaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtt 299  Q
    ||||||||||| |||| |||| ||  |||| ||||| | ||||||||| |||||||||||||||||    
T  35087428 aaatttatgggaccaaattgagacggtttaaagttaaaggatcaaaatgaaattcaaaaataagtt 35087493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 37374682 - 37374649
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||||||||||||||||||||| ||||||    
T  37374682 gatcaaaataaaattcaaaaataagttgagggac 37374649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 43006503 - 43006398
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| ||||||||  | ||||| ||||| | ||| ||| |||| |||| |||||| ||||||||  || |||| | |||  |||||||||||||    
T  43006503 ctaacggagatgaccaaaatagcaaacggcataagacttaggggaccaaattgagacacttaatagttaggggaccaaattgaaaaccaaaaataagtta 43006404  T
Q  301 agggac 306  Q
    ||||||    
T  43006403 agggac 43006398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 43705512 - 43705479
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  43705512 gatcaaaatgaaattcaaaaataagttaagggac 43705479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Original strand, 43705612 - 43705645
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  43705612 gatcaaaatgaaattcaaaaataagttaagggac 43705645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 46673607 - 46673539
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    |||| |||||||||||| |  ||||||| ||||| ||||||||| |||| |||||||||||||| |||||    
T  46673607 ctaatggagaggaccaacatagtaaacg-cataagatttatgggaccaaattgaaacactttattgttag 46673539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 47810059 - 47810026
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||||||||||||||||||||| ||||||    
T  47810059 gatcaaaataaaattcaaaaataagttgagggac 47810026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 4857319 - 4857215
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||| ||||  ||||||| || || |||| |||| |||| | || ||| |||||||||||  || |||| | |||  |||||||||||||    
T  4857319 ctaacggagaggactaaaacagtaaacggcagaagatttgtgggaccaaatcgagacattttatagttaggggaccaaagtgaaaaccaaaaataagtta 4857220  T
Q  301 aggga 305  Q
    |||||    
T  4857219 aggga 4857215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 4858363 - 4858447
Alignment:
Q  222 gtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||||| ||| || ||||||||| |||| |||| ||| |||||||||||  ||||||| | |||   ||||||||||||||||||    
T  4858363 gtaaacaacagaagatttatgggaccaaattgagacattttatagttaggggatcaaagtgaaaactaaaaataagttaagggac 4858447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 301
Target Start/End: Complemental strand, 14107950 - 14107850
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  || ||||||| || || || ||| |||  |||| ||||||||||||||   || |||||| |||  |||||||||||||    
T  14107950 ctaacggagaggaccaaaacggtgaacgacagaagatataagggaccactttgagacactttatagttaagggaccaaaatgaaaaccaaaaataagtta 14107851  T
Q  301 a 301  Q
    |    
T  14107850 a 14107850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 301
Target Start/End: Complemental strand, 14417907 - 14417807
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  || ||||||| || || || ||| |||  |||| ||||||||||||||   || |||||| |||  |||||||||||||    
T  14417907 ctaacggagaggaccaaaacggtgaacgacagaagatataagggaccactttgagacactttatagttaagggaccaaaatgaaaaccaaaaataagtta 14417808  T
Q  301 a 301  Q
    |    
T  14417807 a 14417807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 17288255 - 17288323
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| |||| |||| |||||||||||||||  || |||||| |||   ||||||||||||||||||    
T  17288255 ttatgggaccaaattgagacactttatagttaggggaccaaaattaaaacaaaaaataagttaagggac 17288323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 38406135 - 38406031
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||| ||||||||||  ||||||| || || ||||||||  |||  |||| |||||||||||||||  || |||||| |||  ||||||||| ||||    
T  38406135 taacggaaaggaccaaaacagtaaacgtcagaagatttatggaaccagtttgagacactttatagttaggggaccaaaatgaaaaccaaaaataaattaa 38406036  T
Q  302 gggac 306  Q
     ||||    
T  38406035 aggac 38406031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 38408317 - 38408377
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||| || |||| | ||| |||||||||| |||||||||    
T  38408317 ccaatttgagacactttatagttagaggaccaaagtgaaaatcaaaaataaattaagggac 38408377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 41616697 - 41616637
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||  || |||||| |||| | |||||||||||||||||    
T  41616697 ccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 41616637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 3e-54; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 34 - 172
Target Start/End: Complemental strand, 41312782 - 41312643
Alignment:
Q  34 aagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaa 132  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||    
T  41312782 aagattgatggtgattttaaatttatatttttaggaaaatcaagaaaaatagaaatgattatatgttgtgagtccattgtatacctgtgtacttttcaaa 41312683  T
Q  133 ttaaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
    |  ||||||||||||||||||| |||||||||||||||||    
T  41312682 tctaacccttgatcaccaatcttaaatgacatgtggacaa 41312643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 33837056 - 33836912
Alignment:
Q  29 agataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttt 127  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||| |||    
T  33837056 agatgaagattgatggtgattttaaatttatatttttaggaaaatcaagaagaatagaaatgattatatgttgtgagcccattgtatacttgtgtacttt 33836957  T
Q  128 tcaaattaaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
    ||||||  | ||||||||||||||||| |||||||||||||||||    
T  33836956 tcaaatctagcccttgatcaccaatcttaaatgacatgtggacaa 33836912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 37 - 305
Target Start/End: Complemental strand, 2305818 - 2305554
Alignment:
Q  37 attgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaatta 135  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||      
T  2305818 attgatggtgattttaaatttatatttttaggaaa-tcaagaaaaatagaaatgattatatgttgtgagcccattgtatacttgtgtacttttcaaatct 2305720  T
Q  136 aacccttgatcaccaatctcaaatgacatgtggacaatgattagttgtttttgnnnnnnnnnnncctaacggagaggaccaaaagtgtaaacgacataaa 235  Q
    | ||||||||| ||||||| ||||||||||||||||| | |||  | ||||||            |||||||||||||||||||| |  |||| || ||     
T  2305719 agcccttgatctccaatcttaaatgacatgtggacaagggttaactatttttgaaaacaaa----ctaacggagaggaccaaaagaggtaacggcagaag 2305624  T
Q  236 atttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaaggga 305  Q
    |  || ||| |||| |||| |||||||||||||||  ||||||||| |||| ||||||||||||||||||    
T  2305623 acataagggaccaaattgagacactttatagttaggggatcaaaatgaaatccaaaaataagttaaggga 2305554  T

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Target: chr2; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 34 - 172
Target Start/End: Complemental strand, 3665506 - 3665367
Alignment:
Q  34 aagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaa 132  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||| ||||||||    
T  3665506 aagattgatggtgattttaaatttatatttttaggaaaatcaagaaaaatagaaatgattatatgttgtgagcctattgtatacttgtgtacttttcaaa 3665407  T
Q  133 ttaaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
    |  |  |||||||||||||||| |||||||||||||||||    
T  3665406 tctagtccttgatcaccaatcttaaatgacatgtggacaa 3665367  T

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Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 301
Target Start/End: Original strand, 6208970 - 6209162
Alignment:
Q  104 agtccattgtatacttgtgta-ttttcaaattaaacccttgatcaccaatctcaaatgacatgtggacaa-tgattagttgtttttgnnnnnnnnnnncc 201  Q
    ||||||||||||||||||||| |||| ||||  ||||||||||||||||||| ||||||||||||||||| || ||| || ||||||            |    
T  6208970 agtccattgtatacttgtgtactttttaaatctaacccttgatcaccaatcttaaatgacatgtggacaattggttaattatttttgaaaaaa------c 6209063  T
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||| ||| ||||||||  |||||||||| || | ||||||| |||| || | ||||||||||||||||||| |||||| |||| ||||||||||||||    
T  6209064 taacgaagaagaccaaaatagtaaacgaca-aagaattatgggaccaaattaagacactttatagttagatgaccaaaatgaaatccaaaaataagttaa 6209162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 1624975 - 1625075
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||| ||||||||  ||||| | ||||| |||||| || |||| |||| |||||||||||||||| ||||||||| |||| ||||||||||||||    
T  1624975 taacggagaagaccaaaatagtaaatggcataagatttataggaccaaattgagacactttatagttaga-gatcaaaatgaaatccaaaaataagttaa 1625073  T
Q  302 gg 303  Q
    ||    
T  1625074 gg 1625075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 12853004 - 12852899
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| ||||||||  |||||||| | || ||||||||| |||| |||| |||||||||||||||  || |||||| |||| ||||| |||||||    
T  12853004 ctaacggagatgaccaaaatagtaaacgatagaagatttatgggaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaagtaagtta 12852905  T
Q  301 agggac 306  Q
    ||||||    
T  12852904 agggac 12852899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 6707044 - 6706939
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||||||| |||||||||  |||||||  | || ||||||||  |||| |||| |||||||||||||||  || |||||| |||| |||||||||||||    
T  6707044 ctaacggaggggaccaaaatagtaaacggaagaagatttatggaaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaataagtta 6706945  T
Q  301 agggac 306  Q
    ||||||    
T  6706944 agggac 6706939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 42027311 - 42027206
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||| |||||||||   ||||||  || |||||||||||| |||| |||| ||| ||| |||||||| || |||||| ||| ||||||||||||||    
T  42027311 ctaacggaaaggaccaaagtagtaaacagcagaaaatttatgggaccaaattgagacattttgtagttagaggaccaaaatgaaaatcaaaaataagtta 42027212  T
Q  301 agggac 306  Q
    ||||||    
T  42027211 agggac 42027206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 42028956 - 42029061
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| ||||||||  |||| ||||| || | ||||||| |||| | || ||||||||||||||||||| |||||| |||  |||||||| ||||    
T  42028956 ctaacggagaagaccaaaatagtaagcgacagaagaattatgggaccaaatcgagacactttatagttagatgaccaaaatgaaaaccaaaaatacgtta 42029055  T
Q  301 agggac 306  Q
    ||||||    
T  42029056 agggac 42029061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 300
Target Start/End: Complemental strand, 2581921 - 2581822
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||||||||||||||| |  ||||||| | ||| ||||||||| |||| |||| |||||||||||||||  ||||||| | |||  |||||||||||||    
T  2581921 ctaacggagaggaccaagatagtaaacggcgtaagatttatgggaccaaattgagacactttatagttaggggatcaaattgaaaaccaaaaataagtta 2581822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 23177792 - 23177686
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta-gatgatcaaaataaaattcaaaaataagtt 299  Q
    |||||||||||||||||||  ||||||| || || ||||||||| |||| |||| |||||||||||||| |  || |||||| |||  ||||||||| ||    
T  23177792 ctaacggagaggaccaaaatggtaaacggcagaagatttatgggaccaaattgagacactttatagttagggggaccaaaatgaaaaccaaaaataaatt 23177693  T
Q  300 aagggac 306  Q
    |||||||    
T  23177692 aagggac 23177686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 23589049 - 23588943
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta-gatgatcaaaataaaattcaaaaataagtt 299  Q
    |||||||||||||||||||  ||||||| || || ||||||||| |||| |||| |||||||||||||| |  || |||||| |||  ||||||||| ||    
T  23589049 ctaacggagaggaccaaaatggtaaacggcagaagatttatgggaccaaattgagacactttatagttagggggaccaaaatgaaaaccaaaaataaatt 23588950  T
Q  300 aagggac 306  Q
    |||||||    
T  23588949 aagggac 23588943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 41795989 - 41796055
Alignment:
Q  240 atgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||| |||| |||| |||||||||||||||  ||||||||| ||| ||||||||||||||||||||    
T  41795989 atgggaccaaattgagacactttatagttaggggatcaaaatgaaaatcaaaaataagttaagggac 41796055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 12958502 - 12958433
Alignment:
Q  233 aaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaag 302  Q
    |||||||||||| |||| |||| |||||||||||||||  ||||||| |||||  |||||||||||||||    
T  12958502 aaaatttatgggaccaaattgagacactttatagttaggggatcaaattaaaaaccaaaaataagttaag 12958433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 15268617 - 15268527
Alignment:
Q  81 aatagaaatgatcatatgttgtgagtccattgtatacttgtgt---attttcaaattaaacccttgatcaccaatctcaaatgacatgtgg 168  Q
    |||| |||| ||||||||||||||||| ||||||| |||||||    |||| ||||| | |||||||||||||||| ||||||||| ||||    
T  15268617 aataaaaattatcatatgttgtgagtctattgtatccttgtgtgtgtttttaaaattcagcccttgatcaccaatcacaaatgacacgtgg 15268527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 15650559 - 15650455
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| ||||||||  ||||||||||||| ||||| |   |||| |||| |||||||||||||||  || |||| ||| | | ||||||||||||    
T  15650559 ctaacggagatgaccaaaatagtaaacgacataagatttaagataccaaattgagacactttatagttaggggaccaaattaacaatgaaaaataagtta 15650460  T
Q  301 aggga 305  Q
    |||||    
T  15650459 aggga 15650455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 14509326 - 14509259
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta 269  Q
    ||||||||||||||||||  |||||||||| || ||||||||| || | || ||||||||||||||||    
T  14509326 taacggagaggaccaaaatagtaaacgacagaagatttatgggaccgaattaaaacactttatagtta 14509259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 37867852 - 37867769
Alignment:
Q  223 taaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| | ||||||| |||| |||| |||| |||||||||||||||  ||||||| | |||  |||||||||||||||||||    
T  37867852 taaacgaaagaaaatttgtgggaccaaattgagacactttatagttaggggatcaaattgaaaaccaaaaataagttaagggac 37867769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 14510410 - 14510452
Alignment:
Q  81 aatagaaatgatcatatgttgtgagtccattgtatacttgtgt 123  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  14510410 aatagaaatgatcatatgttgtgagtgcattgtatatttgtgt 14510452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 41313320 - 41313370
Alignment:
Q  256 acactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||||||||||||||  || ||||||||||||| |||||||||||||||||    
T  41313320 acactttatagttaggggaccaaaataaaattcgaaaataagttaagggac 41313370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 306
Target Start/End: Original strand, 10368415 - 10368488
Alignment:
Q  233 aaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||||||  ||| |||| |||||||||||||||  ||||||| | ||| |||||||||| |||||||||    
T  10368415 aaaatttatgggatcaaattgagacactttatagttaggggatcaaattgaaaatcaaaaataaattaagggac 10368488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 29424610 - 29424715
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||| |||||||||||||   |||||| || || ||| | ||| |||| ||||||||||||||||||||  || |||  |||||  |||||||||||||    
T  29424610 ctaacagagaggaccaaaacaataaacggcagaatattcaagggaccaaattgaaacactttatagttaggggaccaatgtaaaaaccaaaaataagtta 29424709  T
Q  301 agggac 306  Q
    ||||||    
T  29424710 agggac 29424715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 3255921 - 3255981
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| ||||||||||||||||||||  || |||||| |||| | |||||||||||||||||    
T  3255921 ccaaattgaaacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 3255981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 3665297 - 3665237
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||||||| |||||||||||| || |||||| |||| | |||||||||||||||||    
T  3665297 ccaaattgaaacattttatagttagaggaccaaaatgaaatccgaaaataagttaagggac 3665237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 7038367 - 7038435
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| |||| |||| ||||||||||||||   || |||||| |||| |||||||||||||||||||    
T  7038367 ttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagttaagggac 7038435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 21012078 - 21012158
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaat 281  Q
    |||||||||| ||||||||  |||||||||  || ||||  ||| |||| ||||||||||||||||||||  |||||||||    
T  21012078 ctaacggagatgaccaaaatagtaaacgacggaagatttgagggaccaaattgaaacactttatagttaggggatcaaaat 21012158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 37869040 - 37869143
Alignment:
Q  203 aacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaag 302  Q
    |||||||| ||||||||  |||||||||| || | ||||| | | || |||| ||||||||||||||   || |||| | ||| ||||||||||||||||    
T  37869040 aacggagaagaccaaaaaggtaaacgacagaagacttatgagactaaattgagacactttatagttaagggaccaaattgaaaatcaaaaataagttaag 37869139  T
Q  303 ggac 306  Q
    ||||    
T  37869140 ggac 37869143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 306
Target Start/End: Original strand, 10477584 - 10477614
Alignment:
Q  276 caaaataaaattcaaaaataagttaagggac 306  Q
    |||||||||||||||||||||||||||||||    
T  10477584 caaaataaaattcaaaaataagttaagggac 10477614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 12854137 - 12854207
Alignment:
Q  236 atttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| |||| |||| ||||||||||||||   || |||||| ||||  ||||||||||||||||||    
T  12854137 atttatgggaccaaattgagacactttatagttaagggaccaaaatgaaatctaaaaataagttaagggac 12854207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Original strand, 17858654 - 17858687
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  17858654 gatcaaaatgaaattcaaaaataagttaagggac 17858687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 23178880 - 23178985
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| ||||||||   ||||||||  || ||||||||| |||| || ||||| |||||||||||  || |||| | |||   ||||||||||||    
T  23178880 ctaacggagatgaccaaaataataaacgactgaagatttatgggaccaatttaaaacagtttatagttaggggaccaaagtgaaaactaaaaataagtta 23178979  T
Q  301 agggac 306  Q
    ||||||    
T  23178980 agggac 23178985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 23590137 - 23590242
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| ||||||||   ||||||||  || ||||||||| |||| || ||||| |||||||||||  || |||| | |||   ||||||||||||    
T  23590137 ctaacggagatgaccaaaataataaacgactgaagatttatgggaccaatttaaaacagtttatagttaggggaccaaagtgaaaactaaaaataagtta 23590236  T
Q  301 agggac 306  Q
    ||||||    
T  23590237 agggac 23590242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 41312618 - 41312513
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||| |  |||| ||||| |  || | | |||| |||| | |||||||||||||| || |||||| |||| | |||||||||||    
T  41312618 ctaacggagaggaccaaaagaggtaacggcataagacataagagaccaaattgagatactttatagttagaggaacaaaatgaaatccgaaaataagtta 41312519  T
Q  301 agggac 306  Q
    | ||||    
T  41312518 atggac 41312513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 42246709 - 42246604
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||| | ||||||||||  |||||||  | || | |||||||  ||| ||||||||||||||| ||||  ||||||||| |||  |||||| ||||||    
T  42246709 ctaacgaaaaggaccaaaatagtaaacggtaaaagagttatgggatcaaattgaaacactttataattaggggatcaaaatgaaaaccaaaaacaagtta 42246610  T
Q  301 agggac 306  Q
    ||||||    
T  42246609 agggac 42246604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 303
Target Start/End: Original strand, 42368343 - 42368408
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagg 303  Q
    ||||||| |||| | || |||||||||||||||  || |||||| |||| ||||||||||||||||    
T  42368343 ttatgggaccaaatcgagacactttatagttaggggaccaaaatgaaatccaaaaataagttaagg 42368408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 4628943 - 4628895
Alignment:
Q  258 actttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||  |||| || ||||||||||| |||||||||||||||||||    
T  4628943 actttatatatagaggaccaaaataaaatccaaaaataagttaagggac 4628895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 4829583 - 4829515
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta 269  Q
    ||||| |||||||||||||  ||||||||||||| ||||||| |  ||| |||| ||| ||||||||||    
T  4829583 ctaacagagaggaccaaaatagtaaacgacataagatttatgagatcaaattgagacattttatagtta 4829515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 5564132 - 5564072
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||| |||   || |||||| ||||||||||||||||||||||||    
T  5564132 ccaaattgagacactttataattaagggaccaaaatgaaattcaaaaataagttaagggac 5564072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 5565188 - 5565248
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||| |||   || |||||| ||||||||||||||||||||||||    
T  5565188 ccaaattgagacactttataattaagggaccaaaatgaaattcaaaaataagttaagggac 5565248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 303
Target Start/End: Original strand, 12959705 - 12959805
Alignment:
Q  203 aacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaag 302  Q
    ||||||||||| |||||  ||||||| || || |||||| || | || |||| ||||||||| ||||   || |||| ||||| ||||||||||||||||    
T  12959705 aacggagaggatcaaaaaggtaaacggcagaagatttatcggactaaattgagacactttattgttaagggaccaaattaaaaatcaaaaataagttaag 12959804  T
Q  303 g 303  Q
    |    
T  12959805 g 12959805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 15268989 - 15269062
Alignment:
Q  97 tgttgtgagtccattgtatacttgtgtat---tttcaaattaaacccttgatcaccaatctcaaatgacatgtgg 168  Q
    |||| |||||||||||||| ||||||| |   ||||||||  ||||||||||||||||||  |||||||||||||    
T  15268989 tgttttgagtccattgtat-cttgtgtgtgcttttcaaatctaacccttgatcaccaatcataaatgacatgtgg 15269062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 17179133 - 17179073
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| ||| |||| ||||||  || |||| ||||||||||||||||||||||||||    
T  17179133 ccaaattgagacagtttaaagttaggggaccaaattaaaattcaaaaataagttaagggac 17179073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 35799630 - 35799526
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||||||||||||||||   |||||||  | |||| ||||| | |||| |||| |||||||||||||||  ||  ||| | |||  |||||||||||||    
T  35799630 ctaacggagaggaccaaagaggtaaacggaagaaaagttatgagaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataagtta 35799531  T
Q  301 aggga 305  Q
    |||||    
T  35799530 aggga 35799526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 43015620 - 43015552
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| |||| |||| ||| |||| |||||   || |||||| ||||||||||||||||||||||||    
T  43015620 ttatgggaccaaattgagacagtttaaagttaagggaccaaaatgaaattcaaaaataagttaagggac 43015552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 3e-54; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 14391310 - 14391167
Alignment:
Q  12 gagatgaagagggaagaagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccatt 111  Q
    ||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14391310 gagattaagagggaagaagatgaagattgatggtgaatttcaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagcccatt 14391211  T
Q  112 gtatacttgtgta-ttttcaaattaaacccttgatcaccaatct 154  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||    
T  14391210 gtatacttgtgtacttttcaaatcaaacccttgatcatcaatct 14391167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 168
Target Start/End: Original strand, 25889322 - 25889462
Alignment:
Q  29 agataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttt 127  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  25889322 agatgaagatcgatggtggttttaaatttatatttttaggaaaatcaagaaaaatagaaatgattatatgttgtgagtccattgtatacttgtgtatttt 25889421  T
Q  128 tcaaattaaacccttgatcaccaatctcaaatgacatgtgg 168  Q
    ||||||  | ||||||||||||||||| |||||||||||||    
T  25889422 tcaaatctagcccttgatcaccaatcttaaatgacatgtgg 25889462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 34 - 172
Target Start/End: Complemental strand, 34531945 - 34531806
Alignment:
Q  34 aagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaa 132  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||| ||||||||    
T  34531945 aagattgatggtgattttaaatttatatttttaggaaaatcaagaaaaatagaaatgattatatgttgtgagcccattgtatatttgtgtacttttcaaa 34531846  T
Q  133 ttaaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
    |  | ||||||||||||||||| ||||||||| |||||||    
T  34531845 tctagcccttgatcaccaatcttaaatgacatttggacaa 34531806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 35 - 172
Target Start/End: Original strand, 35684038 - 35684176
Alignment:
Q  35 agattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaat 133  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| |||| ||||    
T  35684038 agattgatggtgattttaaatttatatttttaggaaaatcaagaaaaatagaaatgattatatgttgtgagctcattgtatacttgtgtactttttaaat 35684137  T
Q  134 taaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
      | ||||||||| ||||||| |||||||||||||||||    
T  35684138 ctagcccttgatctccaatcttaaatgacatgtggacaa 35684176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 47 - 172
Target Start/End: Complemental strand, 48973467 - 48973341
Alignment:
Q  47 attttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaattaaacccttgat 145  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||  | ||||||||    
T  48973467 attttaaatttatatttttaggaaaatcaagaaaaatagaaatgattatatgttgtgagcccattgtatacttgtgtacttttcaaatctagcccttgat 48973368  T
Q  146 caccaatctcaaatgacatgtggacaa 172  Q
    ||||||||| |||||||||||||||||    
T  48973367 caccaatcttaaatgacatgtggacaa 48973341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 34 - 172
Target Start/End: Original strand, 48934944 - 48935083
Alignment:
Q  34 aagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaa 132  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| ||||||||    
T  48934944 aagattgatggtgattttaaatttatatttttgggaaaatcaagaaaaataaaaatgattatatgttgtgagcccattgtatacttgtgtacttttcaaa 48935043  T
Q  133 ttaaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
    |  | |||||||||| |||||| |||||| ||||||||||    
T  48935044 tctagcccttgatcatcaatcttaaatgatatgtggacaa 48935083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 306
Target Start/End: Original strand, 2237814 - 2238081
Alignment:
Q  35 agattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaat 133  Q
    ||||||||||||||||||||||| || ||||||||| |  || ||||||||||||||| ||||  |||||| |||||||||||||||||| |||||||||    
T  2237814 agattgatggtgattttaaatttataattttaggaagaaaaa-aaaaatagaaatgattatattctgtgagcccattgtatacttgtgtatttttcaaat 2237912  T
Q  134 taaacccttgatcaccaatctcaaatgacatgtggacaatgattagttgtttttgnnnnnnnnnnncctaacggagaggaccaaaagtgtaaacgacata 233  Q
      | ||||||||| |||| || ||||||||||||||||| |||||  | ||||||            |||||||||||||||||||| |  ||||||| |    
T  2237913 ctagcccttgatctccaaccttaaatgacatgtggacaaggattaactatttttgaaaacaaa----ctaacggagaggaccaaaagaggtaacgacaga 2238008  T
Q  234 aaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    | |  || ||| |||| |||| ||||||||||||||   || |||||| |||| | |||||||||||||||||    
T  2238009 agacataagggaccaaattgagacactttatagttatgggaccaaaatgaaatccgaaaataagttaagggac 2238081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 20953593 - 20953496
Alignment:
Q  12 gagatgaagagggaagaagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtcca 109  Q
    |||||||||||| |||||||| |||||| || |||||||| ||||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||    
T  20953593 gagatgaagaggaaagaagatgaagatttatagtgatttttaatttttatttttaggaaaattaagaaaaatataaattatcatatgttgtcagtcca 20953496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 42248119 - 42248216
Alignment:
Q  12 gagatgaagagggaagaagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtcca 109  Q
    |||||||||||| ||||||||||| || ||| |||||||| |||||||||||| |||||||| ||||||||||||||| |||||||||||| ||||||    
T  42248119 gagatgaagaggaaagaagataaatatagatagtgatttttaatttttattttcaggaaaattaagaaaaatagaaattatcatatgttgtcagtcca 42248216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 26056145 - 26056250
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  |||||||||| || ||||||||| |||| |||| |||||||||||||||  || |||||| |||| |||||||||||||    
T  26056145 ctaacggagaggaccaaaatagtaaacgacaaaagatttatgggaccaaattgagacactttatagttaggggaccaaaatgaaatccaaaaataagtta 26056244  T
Q  301 agggac 306  Q
    ||||||    
T  26056245 agggac 26056250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 303
Target Start/End: Complemental strand, 16217558 - 16217456
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| ||||||||  ||||| ||||||| |||||| || |||| |||| |||||||||||||||||||||||| |||||  |||||||||||||    
T  16217558 ctaacggagatgaccaaaatagtaaatgacataagatttataggaccaaattgagacactttatagttagatgatcaaattaaaaaccaaaaataagtta 16217459  T
Q  301 agg 303  Q
    |||    
T  16217458 agg 16217456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 3978161 - 3978057
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||  |||||||||| || | |||||||  ||| |||| |||||||||||||| | || |||||| |||||||||||||||||||    
T  3978161 taacggagaggaccaaaatagtaaacgacagaagaattatgggatcaaattgagacactttatagttaaaggaccaaaatgaaattcaaaaataagttaa 3978062  T
Q  302 gggac 306  Q
    |||||    
T  3978061 gggac 3978057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 14390376 - 14390271
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  |||||||| | || ||||||||  |||| |||| ||| |||||||||||| || |||||| ||||| ||||||||||||    
T  14390376 ctaacggagaggaccaaaatggtaaacgaaagaagatttatggaaccaaattgagacattttatagttagaggaccaaaatgaaattaaaaaataagtta 14390277  T
Q  301 agggac 306  Q
    ||||||    
T  14390276 agggac 14390271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 47411102 - 47410997
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| ||||||||  ||||||||||||| ||||||| | |||| |||| |||||||||||||||  ||||||| | ||| |||||||||| |||    
T  47411102 ctaacggagatgaccaaaatagtaaacgacataagatttatgagaccaaattgagacactttatagttaggggatcaaattgaaaatcaaaaataattta 47411003  T
Q  301 agggac 306  Q
    ||||||    
T  47411002 agggac 47410997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 13930675 - 13930778
Alignment:
Q  203 aacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaag 302  Q
    |||||| ||||||||||  ||||||||||||| | ||||||| |||| |||| |||||||||||||||| || |||| | |||  |||||||||||||||    
T  13930675 aacggaaaggaccaaaatggtaaacgacataagacttatgggaccaaattgagacactttatagttagaggaccaaattgaaaaccaaaaataagttaag 13930774  T
Q  303 ggac 306  Q
    ||||    
T  13930775 ggac 13930778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 200 - 306
Target Start/End: Original strand, 3979310 - 3979416
Alignment:
Q  200 cctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtt 299  Q
    ||||||||||||||||||||  ||||||| || || | ||||||| |||| |||| ||||||||||||||   || |||||| |||| ||||||||||||    
T  3979310 cctaacggagaggaccaaaatagtaaacggcagaagaattatgggaccaaattgagacactttatagttaagggaccaaaatgaaatccaaaaataagtt 3979409  T
Q  300 aagggac 306  Q
    |||||||    
T  3979410 aagggac 3979416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 25786086 - 25785981
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||| |||||||||||||   |||||||||||| ||||||||| |||| |||| |||||||||||||||  || |||| | |||  |||||||||||||    
T  25786086 ctaacagagaggaccaaaataataaacgacataagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagtta 25785987  T
Q  301 agggac 306  Q
    ||||||    
T  25785986 agggac 25785981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 25787162 - 25787267
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  ||||| | ||||| ||||||| | |||| |||| |||||||||||||||  || |||| | |||  |||||||||||||    
T  25787162 ctaacggagaggaccaaaatagtaaatggcataagatttatgagaccaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataagtta 25787261  T
Q  301 agggac 306  Q
    ||||||    
T  25787262 agggac 25787267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 26055004 - 26054916
Alignment:
Q  212 gaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||||||  |||||||||| || ||||||||  |||| ||||||||||||||||||||  || |||||| |||| |||||||||||||    
T  26055004 gaccaaaatagtaaacgacagaagatttatggaaccaaattgaaacactttatagttaggggaccaaaatgaaatccaaaaataagtta 26054916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 13641374 - 13641271
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||| ||||||||  ||||||| || || ||||||||| |||| |||| |||||||||||||||  || |||| | |||  ||||||||||||||    
T  13641374 taacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaa 13641275  T
Q  302 ggga 305  Q
    ||||    
T  13641274 ggga 13641271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 14071203 - 14071306
Alignment:
Q  203 aacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaag 302  Q
    |||||| ||||||||||  |||||||||| || | ||||||| |||| |||| |||||||||||||||| || |||| | |||  ||||||||| |||||    
T  14071203 aacggaaaggaccaaaatggtaaacgacagaagacttatgggaccaaattgagacactttatagttagaggaccaaattgaaaaccaaaaataaattaag 14071302  T
Q  303 ggac 306  Q
    ||||    
T  14071303 ggac 14071306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 42248303 - 42248401
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtt 299  Q
    |||||| ||||||| ||||  ||||||||||||| |||||| || |||| |||| ||||||||||||||   || |||||| |||| ||||||||||||    
T  42248303 ctaacgaagaggactaaaatggtaaacgacataagatttataggaccaaattgagacactttatagttatgggaccaaaatgaaatccaaaaataagtt 42248401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 6709977 - 6709830
Alignment:
Q  12 gagatgaagagggaagaagataaagattgatggtgattttaaatttt---tatttttaggaaaatcaagaaa-aatagaaatgatcatatgttgtgagtc 107  Q
    ||||||||||||||||||||| ||||||| |||||||||| ||||||    | ||  ||  ||||   |||| | || ||||||||||||||||||||||    
T  6709977 gagatgaagagggaagaagatgaagattgttggtgatttttaattttagaaaattcaagacaaatagggaaagattataaatgatcatatgttgtgagtc 6709878  T
Q  108 cattgtata-cttgtgt-attttcaaattaaacccttgatcaccaatc 153  Q
    ||||||| |  ||||||  ||||||||| |||||||||||||||||||    
T  6709877 cattgtaaattttgtgtgtttttcaaatcaaacccttgatcaccaatc 6709830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 20953406 - 20953301
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||| ||||  ||||| ||| ||| |||||| || |||| |||| |||||||||||||| |  |  ||||| |||| |||||||||||||    
T  20953406 ctaacggagaggactaaaatggtaaatgacttaagatttataggaccaaattgagacactttatagttatagaactaaaatgaaatccaaaaataagtta 20953307  T
Q  301 agggac 306  Q
    ||||||    
T  20953306 agggac 20953301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 52742974 - 52743079
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||| ||  |||||||||||||||  || ||| |||| |||| |||||||||||||||  || |||| | ||| | ||||||||| ||    
T  52742974 ctaacggagaggaccataacagtaaacgacataaaacctaagggaccaatttgagacactttatagttaggggaccaaagtgaaaatgaaaaataagcta 52743073  T
Q  301 agggac 306  Q
    ||||||    
T  52743074 agggac 52743079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 172
Target Start/End: Complemental strand, 2971934 - 2971842
Alignment:
Q  81 aatagaaatgatcatatgttgtgagtccattgtatacttgtgtattttc-aaattaaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
    ||||||||| |||||||||||||||| |||| |||| ||||||  |||| ||||  | ||||||||| ||||||| |||||||| ||||||||    
T  2971934 aatagaaataatcatatgttgtgagttcattttatatttgtgtgctttctaaatccagcccttgatcgccaatcttaaatgacacgtggacaa 2971842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 36511329 - 36511397
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta 269  Q
    |||||||||| ||||||||  |||||||||| || ||||||||| |||| |||| ||||||||||||||    
T  36511329 ctaacggagatgaccaaaatagtaaacgacagaagatttatgggaccaaattgagacactttatagtta 36511397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 52181304 - 52181408
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||| ||||||||  |||||| |||||| ||||||| | | || |||| |||||||||||||||| || |||| | ||| | |||||||||||||    
T  52181304 taacggagatgaccaaaatagtaaacaacataagatttatgagactaaattgagacactttatagttagaggaccaaattgaaaataaaaaataagttaa 52181403  T
Q  302 gggac 306  Q
     ||||    
T  52181404 aggac 52181408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 306
Target Start/End: Original strand, 9123439 - 9123502
Alignment:
Q  243 ggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| |||||||||||||||||||   || ||||||||||| | |||||||||||||||||    
T  9123439 ggtccaaattgaaacactttatagttaagggaccaaaataaaatccgaaaataagttaagggac 9123502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 16218476 - 16218545
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    |||||||||| ||||||||   |||||||||||| ||||||||| |||| |||| | |||||||||||||    
T  16218476 ctaacggagatgaccaaaatattaaacgacataagatttatgggaccaaattgagatactttatagttag 16218545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 47136685 - 47136754
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    |||||||||||||||||||  ||||||| ||||| |||||||   |||| |||| |||||||||||||||    
T  47136685 ctaacggagaggaccaaaatagtaaacggcataagatttatgacaccaaattgagacactttatagttag 47136754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 47411446 - 47411515
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    ||||||||||| | |||||  ||||||| ||||| ||||||||| |||| |||| |||||||||||||||    
T  47411446 ctaacggagagaatcaaaatagtaaacggcataagatttatgggaccaaattgagacactttatagttag 47411515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 2236930 - 2236826
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    |||||||||||| |||||| |  ||||||| || |  || ||| |||| |||| |||||||||||||||  || |||||| |||| | ||||||||||||    
T  2236930 taacggagaggatcaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaa 2236831  T
Q  302 gggac 306  Q
    |||||    
T  2236830 gggac 2236826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 9119875 - 9119815
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||| || |||| |||||| | |||||||||||||||||    
T  9119875 ccaaattgagacactttatagttagaggaccaaattaaaatccgaaaataagttaagggac 9119815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 14312848 - 14312788
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| ||||||||||| |||  || ||||||||||| |||||||||||||||||||    
T  14312848 ccaaattgagacactttatagctaggagaccaaaataaaatccaaaaataagttaagggac 14312788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 19466203 - 19466271
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta 269  Q
    ||||||||||| |||| ||  |||||||||| || ||||||||| |||| |||| ||||||||||||||    
T  19466203 ctaacggagagaaccacaatagtaaacgacagaagatttatgggaccaaattgagacactttatagtta 19466271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 32823539 - 32823471
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| |||| |||| ||| |||| |||||   || |||||||||||||||||||||||||||||||    
T  32823539 ttatgggaccaaattgagacagtttaaagttaagggaccaaaataaaattcaaaaataagttaagggac 32823471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 33941390 - 33941330
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| ||| |||||| ||| | || |||||||||||||||||||||||||||||||    
T  33941390 ccaaattgagacattttataattaaaggaccaaaataaaattcaaaaataagttaagggac 33941330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 34532745 - 34532805
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||  || ||||||||||||| |||||||||||| ||||    
T  34532745 ccaaattgagacactttatagttaggggaccaaaataaaattcgaaaataagttaaaggac 34532805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 35683172 - 35683068
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||| |  |||| || || |  || ||| |||| |||| |||||||||||||||  || |||||| |||| | ||||||||||||    
T  35683172 taacggagaggaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaa 35683073  T
Q  302 gggac 306  Q
    |||||    
T  35683072 gggac 35683068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 36509929 - 36509861
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta 269  Q
    ||||||||||| |||||||  ||||||| || || ||||||||  |||| |||||||||||||||||||    
T  36509929 ctaacggagagaaccaaaatagtaaacggcagaagatttatggaaccaaattgaaacactttatagtta 36509861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 43190541 - 43190601
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||||||| |||| ||||||  || |||| ||||||||||||||||||||||||||    
T  43190541 ccaaattgaaacagtttaaagttaggggaccaaattaaaattcaaaaataagttaagggac 43190601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 50678439 - 50678379
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| ||| ||||||||||   ||||||||| ||||||||||||||||||||||||    
T  50678439 ccaaattgagacattttatagttaagggatcaaaatgaaattcaaaaataagttaagggac 50678379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 32823576 - 32823639
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||| |||| |||| ||| |||| ||||||  || ||||||||||||||||||||||||||    
T  32823576 ttatgggaccaaattgagacagtttaaagttaggggaccaaaataaaattcaaaaataagttaa 32823639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 42244572 - 42244517
Alignment:
Q  251 ttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| ||| |||||||||| |||| |||||| |||| |||||||||||||||||||    
T  42244572 ttgagacattttatagttatatgaccaaaatgaaatccaaaaataagttaagggac 42244517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 305
Target Start/End: Complemental strand, 43189631 - 43189572
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaaggga 305  Q
    |||| |||||||| |||| ||||||  ||||||| |||||||||||||||| ||||||||    
T  43189631 ccaaattgaaacagtttaaagttaggggatcaaattaaaattcaaaaataaattaaggga 43189572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 52741556 - 52741501
Alignment:
Q  251 ttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||||||||||||||| || ||||||||||   ||||||||||||||||||    
T  52741556 ttgagacactttatagttagaggaccaaaataaaaacgaaaaataagttaagggac 52741501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 1873902 - 1873956
Alignment:
Q  251 ttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaaggga 305  Q
    |||| |||||||||||||||  || ||||||||||||  ||||||||||||||||    
T  1873902 ttgagacactttatagttaggggaccaaaataaaatttgaaaataagttaaggga 1873956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 34531778 - 34531676
Alignment:
Q  204 acggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagg 303  Q
    ||||||||||||||||| |  ||||||| || |  || | | |||| |||| ||| |||||||||||| || |||||| |||| | ||||||||||||||    
T  34531778 acggagaggaccaaaagagataacgacagaagacataagagaccaaattgagacattttatagttagaggaccaaaatgaaatccgaaaataagttaagg 34531679  T
Q  304 gac 306  Q
    |||    
T  34531678 gac 34531676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 51726842 - 51726920
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaa 279  Q
    ||||||| |||||| ||||  |||||||||| || ||||||||  |||| |||| |||||||||||||| |||| ||||    
T  51726842 ctaacggtgaggactaaaatagtaaacgacagaagatttatggaaccaaattgagacactttatagttaaatgaccaaa 51726920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 21277112 - 21277007
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||| |||||||| |||||  ||||||| || || ||||||||| |||| |||| | |||||||||||||   | |||| | |||  |||||||||||||    
T  21277112 ctaatggagaggatcaaaatagtaaacggcagaagatttatgggaccaaattgagatactttatagttaggcaaccaaattgaaaaccaaaaataagtta 21277013  T
Q  301 agggac 306  Q
    ||||||    
T  21277012 agggac 21277007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 25432542 - 25432509
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  25432542 gatcaaaatgaaattcaaaaataagttaagggac 25432509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 35684201 - 35684305
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||| |  ||||||| || |  || ||| |||| |||| ||| |||||||||||  || ||||||||||| | |||||||||||    
T  35684201 ctaacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagaca-tttatagttaggggaccaaaataaaatccgaaaataagtta 35684299  T
Q  301 agggac 306  Q
    | ||||    
T  35684300 atggac 35684305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 47511413 - 47511380
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  47511413 gatcaaaatgaaattcaaaaataagttaagggac 47511380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 47512004 - 47511971
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||||||||||||||||||||| ||||||    
T  47512004 gatcaaaataaaattcaaaaataagttgagggac 47511971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 48935108 - 48935213
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| ||||||||| |  |||| || || |  || ||| |||| |||| |||||||||||||||  || |||||| |||| | |||||||||||    
T  48935108 ctaacggagatgaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagtta 48935207  T
Q  301 agggac 306  Q
    ||||||    
T  48935208 agggac 48935213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 9592335 - 9592287
Alignment:
Q  222 gtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    |||||||||| || |||||||||  ||| ||||||||||||||||||||    
T  9592335 gtaaacgacaaaagatttatgggatcaaattgaaacactttatagttag 9592287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 13568488 - 13568548
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||||||||||||||  |||   |||||||||||||  ||||||||||||||||||    
T  13568488 ccaaattgaaacactttataaatagggaatcaaaataaaatctaaaaataagttaagggac 13568548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 14765092 - 14765160
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta 269  Q
    ||||||||||||||| |||  ||||||  || |||||||||||| |||| |||| |||||| |||||||    
T  14765092 ctaacggagaggaccgaaatagtaaactgcaaaaaatttatgggaccaaattgacacacttaatagtta 14765160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 20171197 - 20171265
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| |||| |||| ||| |||| |||||   || |||||||||||||||||||||||||| ||||    
T  20171197 ttatgggaccaaattgagacagtttaaagttaagggaccaaaataaaattcaaaaataagttaaaggac 20171265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 172
Target Start/End: Original strand, 40812493 - 40812584
Alignment:
Q  81 aatagaaatgatcatatgttgtgagtccattgtatacttgtgtattttc-aaattaaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
    ||||||||||||  |||||||||||| ||||||||| ||||||  |||| ||||  |||  ||||||||| |||| || ||||||||||||||    
T  40812493 aatagaaatgattctatgttgtgagttcattgtatatttgtgtgctttctaaatccaacaattgatcacc-atcttaactgacatgtggacaa 40812584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 47560256 - 47560152
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||| ||||||||  ||||||| || || |||||  ||  ||| ||||||||||||||||||||  || |||| | ||| || |||||||| |||    
T  47560256 taacggagatgaccaaaacagtaaacggcagaatatttaaaggatcaaattgaaacactttatagttaggggaccaaagtgaaaatcgaaaataaggtaa 47560157  T
Q  302 gggac 306  Q
    |||||    
T  47560156 gggac 47560152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 49141494 - 49141562
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta 269  Q
    |||||||||| ||| ||||  ||||||| || |||| ||||||| |||| ||||||||||| |||||||    
T  49141494 ctaacggagatgactaaaatggtaaacggcagaaaaattatgggaccaatttgaaacacttaatagtta 49141562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 50679856 - 50679924
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| |||| |||| ||||||||||||||   || ||||||||||   ||||||||||||||||||    
T  50679856 ttatgggaccaaattgagacactttatagttaagggaccaaaataaaaactaaaaataagttaagggac 50679924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 7e-46; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 20988978 - 20988833
Alignment:
Q  28 aagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-tt 126  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||    
T  20988978 aagattaagattgatggtgattttaaatttatatttttaggaaaatcaagaaaaatagaaatgattatatgttgtgagcccattgtatacttgtgtactt 20988879  T
Q  127 ttcaaattaaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
    |||||||  | || |||||||||||||| |||||| |||| |||||    
T  20988878 ttcaaatctagcctttgatcaccaatcttaaatgatatgttgacaa 20988833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 172
Target Start/End: Original strand, 15510100 - 15510236
Alignment:
Q  35 agattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaat 133  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  15510100 agattgatggtgattttaaatttatatttttaggaaaatcaag-aaaatagaaatgattatatgttgtgagtccattgtatacttgtgtacttttcaaat 15510198  T
Q  134 taaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
      | ||||||||   |||||| |||||||||||||||||    
T  15510199 ctagcccttgat-ttcaatcttaaatgacatgtggacaa 15510236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 188
Target Start/End: Original strand, 42980547 - 42980700
Alignment:
Q  28 aagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgtattt 127  Q
    ||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||       |||    
T  42980547 aagatgaagatttatggtgattttagatttttatttttaggaaaatcaagaaaaatataaatgatcatatgttgtgggtccattgtatac-------ttt 42980639  T
Q  128 tcaaattaaacccttgatcaccaatctcaaatgacatgtggacaatgattagttgtttttg 188  Q
    ||||||  ||||||||||||| ||||| |||||||||||||| || |||||  ||||||||    
T  42980640 tcaaatctaacccttgatcacaaatctgaaatgacatgtggataaggattaactgtttttg 42980700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 28 - 305
Target Start/End: Complemental strand, 42979726 - 42979462
Alignment:
Q  28 aagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgtattt 127  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||| |||       |||    
T  42979726 aagatgaagattgatggtgattttaaatttttatttttagggaaatcaagaaaaatacaaatgatcatatgttgtgagcccattgtgtac-------ttt 42979634  T
Q  128 tcaaattaaacccttgatcaccaatctcaaatgacatgtggacaa-tgattagttgtttttgnnnnnnnnnnncctaacggagaggaccaaaagtgtaaa 226  Q
    ||||||  |||||||||| | |||||| ||||||||||||||||| || |||  |||| |||              |||||||||||||||||  |||||    
T  42979633 tcaaatctaacccttgattatcaatcttaaatgacatgtggacaattggttaactgttattgaaaaatc-------aacggagaggaccaaaatagtaaa 42979541  T
Q  227 cgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaaggga 305  Q
    || || || | |||| || |||| ||||||||||||||||||||| || |||||| |||| |||||||||  |||||||    
T  42979540 cggcagaagaattattggaccaaattgaaacactttatagttagaggaccaaaatgaaatccaaaaataaactaaggga 42979462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 35 - 172
Target Start/End: Complemental strand, 4567230 - 4567094
Alignment:
Q  35 agattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaat 133  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||| |||| ||||    
T  4567230 agattgatggtgattttaaatttatatttttaggaaaatcaag-aaaatagaaatgattatatgttgtgagtccattgtatacttatgtactttttaaat 4567132  T
Q  134 taaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
      ||||||||||   |||||| |||||||||||||||||    
T  4567131 ctaacccttgat-ttcaatcttaaatgacatgtggacaa 4567094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 306
Target Start/End: Original strand, 15614843 - 15615063
Alignment:
Q  84 agaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaat-taaacccttgatcaccaatctcaaatgacatgtggacaatgattagtt 181  Q
    |||||| ||||||||||||||| ||||||| |||||||||| ||||||||| ||| || |||||||||||||| ||||||| ||||||||| | |||  |    
T  15614843 agaaataatcatatgttgtgagcccattgtgtacttgtgtacttttcaaatataatcctttgatcaccaatcttaaatgacttgtggacaagggttaact 15614942  T
Q  182 gtttttgnnnnnnnnnnncctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaat 281  Q
     ||||||            ||||| |||||||||||||  ||||||| || |||||||||||  |||| |||| |||||||||||||||  || ||||||    
T  15614943 atttttgaaaataaa----ctaacagagaggaccaaaatagtaaacggcagaaaatttatggaaccaaattgagacactttatagttagcggaccaaaat 15615038  T
Q  282 aaaattcaaaaataagttaagggac 306  Q
     |||| |||||||||| ||||||||    
T  15615039 gaaatccaaaaataagataagggac 15615063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 7345395 - 7345492
Alignment:
Q  208 agaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaaggga 305  Q
    ||||||||||||| |  ||||||| || ||||||||| |||| |||| |||||||||||||||| || |||||| |||||||||||||||||||||||    
T  7345395 agaggaccaaaagagataacgacaaaatatttatgggaccaaattgagacactttatagttagaggaccaaaatgaaattcaaaaataagttaaggga 7345492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 15613622 - 15613519
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||  |||||||  | || ||||||||| |||| |||| |||||||||||||||| || |||||| |||| ||||||||||||||    
T  15613622 taacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacactttatagttagaagaccaaaatgaaatccaaaaataagttaa 15613523  T
Q  302 ggga 305  Q
    ||||    
T  15613522 ggga 15613519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 18693816 - 18693711
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||| |||||||||||||| |  ||||||| || ||||||||| |||  |||| ||| ||||||||||   || |||||||||||||||||||||||||    
T  18693816 ctaacagagaggaccaaaagaggtaacgacagaagatttatgggaccagattgagacattttatagttaagggaccaaaataaaattcaaaaataagtta 18693717  T
Q  301 agggac 306  Q
    ||||||    
T  18693716 agggac 18693711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 12948028 - 12947925
Alignment:
Q  203 aacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaag 302  Q
    |||||| |||||| |||  ||||||||||||| | ||||| |  ||| |||| |||||||||||||||  ||||||||| ||| ||||||||||||||||    
T  12948028 aacggaaaggaccgaaatggtaaacgacataagacttatgagatcaaattgagacactttatagttaggggatcaaaatgaaaatcaaaaataagttaag 12947929  T
Q  303 ggac 306  Q
    ||||    
T  12947928 ggac 12947925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 18678083 - 18677989
Alignment:
Q  212 gaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||  |||||||||| || ||||||||| |||| |||| |||||||||||||||  ||||||| | |||  |||||||||||||||||||    
T  18678083 gaccaaaacggtaaacgacagaagatttatgggaccaaattgagacactttatagttaggggatcaaagtgaaaaccaaaaataagttaagggac 18677989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 10085843 - 10085948
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  |||||   || || ||||||||| |||| ||||||||||||| |||||   || |||| | ||||||||||||||||||    
T  10085843 ctaacggagaggaccaaaatagtaaatagcagaagatttatgggaccaaattgaaacactttaaagttaagagaccaaagtgaaattcaaaaataagtta 10085942  T
Q  301 agggac 306  Q
    ||||||    
T  10085943 agggac 10085948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 21387755 - 21387650
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||| || ||||||||||| |  |||| || || ||||||||| |||| |||| ||| |||||||||||  || |||||| ||||||||||||||||||    
T  21387755 ctaacagacaggaccaaaagaggtaacggcagaagatttatgggaccaaattgagacattttatagttaggggaccaaaatgaaattcaaaaataagtta 21387656  T
Q  301 agggac 306  Q
    ||||||    
T  21387655 agggac 21387650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 15857616 - 15857684
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta 269  Q
    |||||||||| ||||||||  ||||||||||||| |||||||||  ||| |||||||||||||||||||    
T  15857616 ctaacggagatgaccaaaatggtaaacgacataagatttatgggaacaaattgaaacactttatagtta 15857684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 15613774 - 15613647
Alignment:
Q  28 aagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgtattt 127  Q
    ||||| ||||||||||||||||||||| ||||||||| |||          ||||||||||||||||||||||||||||||||||| ||        |||    
T  15613774 aagatgaagattgatggtgattttaaagttttattttcagg----------aaaatagaaatgatcatatgttgtgagtccattgtgta-------tttt 15613692  T
Q  128 tcaaattaaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
    ||||||  | || |||||||| ||||| |||||||||||||||||    
T  15613691 tcaaatctagccattgatcacaaatcttaaatgacatgtggacaa 15613647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 26404209 - 26404312
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    |||||| |||||||||||  ||||| ||||||| |||||||||  ||| |||| |||||||||||||| | || |||| ||||| ||| |||||| ||||    
T  26404209 taacggtgaggaccaaaatagtaaatgacataagatttatgggatcaaattgagacactttatagttaaaggaccaaattaaaaatcataaataaattaa 26404308  T
Q  302 ggga 305  Q
    ||||    
T  26404309 ggga 26404312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 303
Target Start/End: Original strand, 5384344 - 5384446
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  |||||||    || ||||||||| |||| |||| |||||||||||||||  ||||||| | ||| |||||||||| |||    
T  5384344 ctaacggagaggaccaaaatagtaaacggacgaagatttatgggaccaaattgagacactttatagttaggggatcaaattgaaaatcaaaaataaatta 5384443  T
Q  301 agg 303  Q
    |||    
T  5384444 agg 5384446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 1663304 - 1663200
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||| ||||||||  ||||||| || || |||||| || |||| || | ||||||||||||||   ||||||| | |||| ||||||||||||||    
T  1663304 taacggagaagaccaaaatagtaaacggcagaagatttataggaccaaattaagacactttatagttaatggatcaaagtgaaatccaaaaataagttaa 1663205  T
Q  302 gggac 306  Q
    |||||    
T  1663204 gggac 1663200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 8762399 - 8762503
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||| ||||  ||||||||||||||||||||| | |||| |||| ||| |||||||| |   || |||| | ||| | |||||||||||||    
T  8762399 taacggagaggactaaaatagtaaacgacataaaatttatgtgaccaaattgagacattttatagtcatgggaccaaattgaaaattaaaaataagttaa 8762498  T
Q  302 gggac 306  Q
    |||||    
T  8762499 gggac 8762503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 26403424 - 26403320
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    |||| |||| ||||||||  ||||||||||||||||||||| |  ||| |||| ||||||||||||||   || |||| | ||| |||||||||||||||    
T  26403424 taacagagaagaccaaaatagtaaacgacataaaatttatgagatcaaattgagacactttatagttaagggaccaaattgaaaatcaaaaataagttaa 26403325  T
Q  302 gggac 306  Q
     ||||    
T  26403324 aggac 26403320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 5383060 - 5382955
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||||||||||| |||||  |||||||||  || ||||||||| |||| |||| |||||||||| ||||  || ||||   |||  |||||||||||||    
T  5383060 ctaacggagaggatcaaaatagtaaacgaccaaagatttatgggaccaaattgagacactttataattaggagaccaaatagaaaaccaaaaataagtta 5382961  T
Q  301 agggac 306  Q
    ||||||    
T  5382960 agggac 5382955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 15510261 - 15510366
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||| |||||||||||||| |  |||| || || |  || ||| |||| |||| |||||||||||||||  ||||||||| |||| | |||||||||||    
T  15510261 ctaacagagaggaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagttaggggatcaaaatgaaatccgaaaataagtta 15510360  T
Q  301 agggac 306  Q
    ||||||    
T  15510361 agggac 15510366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 302
Target Start/End: Complemental strand, 40058136 - 40058035
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| ||||||||  ||||||| || || | ||||| | |||| ||||||||||| |||||||   ||||||||| |||  |||||||||||||    
T  40058136 ctaacggagatgaccaaaatggtaaacggcagaagagttatgagaccaatttgaaacacttaatagttaagggatcaaaatgaaaaccaaaaataagtta 40058037  T
Q  301 ag 302  Q
    ||    
T  40058036 ag 40058035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 15509268 - 15509208
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||  || ||||||||||| | |||||||||||||||||    
T  15509268 ccaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaagggac 15509208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 42510232 - 42510164
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta 269  Q
    ||||||||||| |||||||  ||||||| || || ||||||||| |||| |||| ||||||||||||||    
T  42510232 ctaacggagagaaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagtta 42510164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 12933819 - 12933764
Alignment:
Q  251 ttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||||||||||||||  ||||||||| |||  |||||||||||||||||||    
T  12933819 ttgagacactttatagttaggggatcaaaatgaaaaccaaaaataagttaagggac 12933764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 12936102 - 12936205
Alignment:
Q  203 aacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaag 302  Q
    |||||| | ||||||||  ||||||  ||||| | |||| || |||| |||| |||||||||||||||  || |||||| |||  |||||||||||||||    
T  12936102 aacggaaatgaccaaaatggtaaacagcataagacttattggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagttaag 12936201  T
Q  303 ggac 306  Q
    ||||    
T  12936202 ggac 12936205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 19525288 - 19525391
Alignment:
Q  203 aacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaag 302  Q
    |||||||||||||||||  ||||||| || || | ||||| | |||| | || |||||||||||||||  || |||| | |||  |||||||||||||||    
T  19525288 aacggagaggaccaaaatggtaaacggcagaagacttatgtgaccaaatggagacactttatagttaggggaccaaattgaaaaccaaaaataagttaag 19525387  T
Q  303 ggac 306  Q
    ||||    
T  19525388 ggac 19525391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 20988758 - 20988703
Alignment:
Q  251 ttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||||||||||||||  || |||||| |||||| |||||||||||||||||    
T  20988758 ttgagacactttatagttaggggaccaaaatgaaattcgaaaataagttaagggac 20988703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 306
Target Start/End: Complemental strand, 1982755 - 1982725
Alignment:
Q  276 caaaataaaattcaaaaataagttaagggac 306  Q
    |||||||||||||||||||||||||||||||    
T  1982755 caaaataaaattcaaaaataagttaagggac 1982725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 32521754 - 32521700
Alignment:
Q  251 ttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaaggga 305  Q
    |||| |||||||||||||||  || |||||||||||  |||||||||||||||||    
T  32521754 ttgagacactttatagttaggggaccaaaataaaatctaaaaataagttaaggga 32521700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 4567069 - 4566964
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||| |||| ||||||||| |  ||||||| || |  || ||| |||| |||| |||||||||||||||  ||||||||| |||| | |||||| ||||    
T  4567069 ctaacagagatgaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagttaggggatcaaaatgaaatccgaaaatatgtta 4566970  T
Q  301 agggac 306  Q
    ||||||    
T  4566969 agggac 4566964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 12937835 - 12937802
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||||||||| ||||||||||||||||||    
T  12937835 gatcaaaataaaattaaaaaataagttaagggac 12937802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 27894033 - 27894090
Alignment:
Q  213 accaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    |||||||  |||||||||  |||||||||| | |||| ||||||||||||||||||||    
T  27894033 accaaaatagtaaacgacggaaaatttatgagaccaaattgaaacactttatagttag 27894090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 4568017 - 4568077
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||  || |||||| |||| | |||||||||||||||||    
T  4568017 ccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 4568077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 5062229 - 5062289
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||  ||||  || |||||| ||||||||||||||||||||||||    
T  5062229 ccaaattgagacactttatcattaggggaccaaaatgaaattcaaaaataagttaagggac 5062289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 305
Target Start/End: Complemental strand, 12951999 - 12951967
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaaggga 305  Q
    ||||||||||||||| |||||||||||||||||    
T  12951999 gatcaaaataaaattaaaaaataagttaaggga 12951967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 15153950 - 15153890
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| ||| |||| ||||| | || |||| ||||||||||||||||||||||||||    
T  15153950 ccaaattgagacagtttaaagttaaaggaccaaattaaaattcaaaaataagttaagggac 15153890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 37371138 - 37371070
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| |||| |||| ||| |||| |||||   || |||||| ||||||||||||||||||||||||    
T  37371138 ttatgggaccaaattgagacaatttaaagttaagggaccaaaatgaaattcaaaaataagttaagggac 37371070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 40059379 - 40059431
Alignment:
Q  254 aaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||||||| ||||||||  ||||||||| |||  |||||||||||||||||||    
T  40059379 aaacacttaatagttaggggatcaaaatgaaaaccaaaaataagttaagggac 40059431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 35 - 306
Target Start/End: Complemental strand, 2035 - 1768
Alignment:
Q  35 agattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-ttttcaaat 133  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| |||||||||    
T  2035 agattgatggtgattttaaatttatatttttaggaaaatcaagaaaaatagaaatgattatatgttgtgagctcattgtatacttgtgtacttttcaaat 1936  T
Q  134 taaacccttgatcaccaatctcaaatgacatgtggacaatgattagttgtttttgnnnnnnnnnnncctaacggagaggaccaaaagtgtaaacgacata 233  Q
      | |||||||||  |||||| ||||||||||||| ||| | |||  | ||||||            |||||||||||||||||||| |  ||||||| |    
T  1935 ctagcccttgatcttcaatcttaaatgacatgtgggcaagggttaactatttttgaaacaaa-----ctaacggagaggaccaaaagaggtaacgacaga 1841  T
Q  234 aaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    | |  || ||| |||| |||| |||||||||| ||||  || |||||| |||| | |||||||||||||||||    
T  1840 agacataagggaccaaattgagacactttataattaggggaccaaaatgaaatccgaaaataagttaagggac 1768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 28 - 306
Target Start/End: Original strand, 19368346 - 19368621
Alignment:
Q  28 aagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgta-tt 126  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||| || ||| ||    
T  19368346 aagatgaagattgatggtgattttaaatttatatttttaggaaaatcaagaaaaatagaaatgattatatgttgtgcgcccattgtatacctgcgtactt 19368445  T
Q  127 ttcaaattaaacccttgatcaccaatctcaaatgacatgtggacaatgattagttgtttttgnnnnnnnnnnncctaacggagaggaccaaaagtgtaaa 226  Q
    |||||||  ||||||||||||||||||| ||||| || ||| |||| | |||  | ||||||            |||||||||||||| ||||| |  ||    
T  19368446 ttcaaatctaacccttgatcaccaatcttaaatggcacgtgaacaagggttaactatttttgaaaacaaa----ctaacggagaggactaaaagaggtaa 19368541  T
Q  227 cgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||| || |  || | | |||| |||| |||||||||||||||| || |||||| |||| | |||||||||||||||||    
T  19368542 cgacagaagacataagagaccaaattgagacactttatagttagaggaccaaaatgaaatccgaaaataagttaagggac 19368621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 27438907 - 27438803
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||| ||||||||| ||||||| || || |||||||||  ||| |||| |||||||||||||| | || |||||| |||| ||||||||||||||    
T  27438907 taacggagatgaccaaaagagtaaacggcagaatatttatgggatcaaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataagttaa 27438808  T
Q  302 gggac 306  Q
    |||||    
T  27438807 gggac 27438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 27440174 - 27440278
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||  |||||||  | || ||||||||| |||| |||| ||| |||| |||||   ||||||||| |||||||||||||||||||    
T  27440174 taacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacaatttaaagttaagggatcaaaatgaaattcaaaaataagttaa 27440273  T
Q  302 gggac 306  Q
    |||||    
T  27440274 gggac 27440278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 31738481 - 31738376
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  ||||||  || || | ||||||| |||| ||||||||||||||||||||  || |||| | |||  |||||||||||||    
T  31738481 ctaacggagaggaccaaaatggtaaaccgcagaagacttatgggaccaaattgaaacactttatagttaggggaccaaattgaaaaccaaaaataagtta 31738382  T
Q  301 agggac 306  Q
    ||||||    
T  31738381 agggac 31738376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 22299902 - 22300005
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||| ||||||||  ||||||| || || ||||||||| |||| |||| |||||||||||||||  || |||| | |||  ||||||||||||||    
T  22299902 taacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagttaggggaccaaagtgaaaaccaaaaataagttaa 22300001  T
Q  302 ggga 305  Q
    ||||    
T  22300002 ggga 22300005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 8412314 - 8412383
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    |||||||||||||||||||  ||||||| || || ||||||||| |||| |||| |||||||||||||||    
T  8412314 ctaacggagaggaccaaaatagtaaacggcacaagatttatgggaccaaattgagacactttatagttag 8412383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 306
Target Start/End: Complemental strand, 5311388 - 5311292
Alignment:
Q  210 aggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||||  ||||||||||||| |||||| || |||| |||| |||||||||||||||  ||  ||| | |||  |||||||||||||||||||    
T  5311388 aggaccaaaatagtaaacgacataagatttataggaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaagggac 5311292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 26582069 - 26581966
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||| ||||||||||| |||| ||||| || || || ||| |||| ||||  |||||||||||||   || ||||||||||| ||||||||||||||    
T  26582069 taacggataggaccaaaagagtaa-cgacaaaagatataagggaccaaattgagtcactttatagttaagggaccaaaataaaatccaaaaataagttaa 26581971  T
Q  302 gggac 306  Q
    |||||    
T  26581970 gggac 26581966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 33807806 - 33807703
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||  ||||||| || |||||||||||   ||| |||| ||||||||||||||   || |||| | |||  ||||||||||||||    
T  33807806 taacggagaggaccaaaacggtaaacggcagaaaatttatggcatcaaattgagacactttatagttaagggaccaaagtgaaaaccaaaaataagttaa 33807707  T
Q  302 ggga 305  Q
    ||||    
T  33807706 ggga 33807703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 31740272 - 31740338
Alignment:
Q  203 aacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta 269  Q
    |||||| ||||||||||  ||||||| ||||| ||||||||| |||| |||| ||||||||||||||    
T  31740272 aacggataggaccaaaatggtaaacggcataagatttatgggaccaaattgagacactttatagtta 31740338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 2138635 - 2138740
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||| |||||||||||||| |  ||||||| || |  || ||| | || |||| |||||||||||||||  || ||||||||||| ||||||||| |||    
T  2138635 ctaacagagaggaccaaaagaggtaacgacagaagacataagggactaaattgagacactttatagttaggggaccaaaataaaatccaaaaataaatta 2138734  T
Q  301 agggac 306  Q
    ||||||    
T  2138735 agggac 2138740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 8411203 - 8411102
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||  ||||||| ||||| ||||||  | |||| |||| |||||||||||||||  ||  ||| | |||  ||||||||||||||    
T  8411203 taacggagaggaccaaaatagtaaacggcataagatttataagaccaaattgagacactttatagttaggggactaaattgaaaaccaaaaataagttaa 8411104  T
Q  302 gg 303  Q
    ||    
T  8411103 gg 8411102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 33802015 - 33802120
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||||||||||||||| |  |||||| ||| || |||||||||  ||| || | |||||||||||||||  || |||| | |||  |||||||||||||    
T  33802015 ctaacggagaggaccaatacggtaaactacagaagatttatgggatcaaattaagacactttatagttaggggaccaaagtgaaaaccaaaaataagtta 33802114  T
Q  301 agggac 306  Q
    ||||||    
T  33802115 agggac 33802120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 293640 - 293716
Alignment:
Q  203 aacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaa 279  Q
    |||||||||||||||||  |||||||||| || | ||||| | |||| ||||||||||||||| ||||  |||||||    
T  293640 aacggagaggaccaaaatggtaaacgacagaagacttatgagaccaaattgaaacactttataattaggagatcaaa 293716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 9927722 - 9927619
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||| ||||||||  ||||||||  | || |||||||| |||| |||| |||||||||||||||  || |||| |||||   |||||||||||||    
T  9927722 taacggagatgaccaaaatagtaaacgat-tgaagtttatgggaccaaattgagacactttatagttaggggaccaaactaaaaacaaaaaataagttaa 9927624  T
Q  302 gggac 306  Q
    |||||    
T  9927623 gggac 9927619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 12203306 - 12203374
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| |||| |||| ||| |||| ||||| | || |||||| ||||||||||||||||||||||||    
T  12203306 ttatgggaccaaattgagacagtttaaagttaaaggaccaaaatgaaattcaaaaataagttaagggac 12203374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 13173110 - 13173050
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||  || ||||||||||| | |||||||||||||||||    
T  13173110 ccaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaagggac 13173050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 19367790 - 19367730
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||  || |||||| |||||| |||||||||||||||||    
T  19367790 ccaaattgagacactttatagttaggggaccaaaatgaaattcgaaaataagttaagggac 19367730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 26584080 - 26584140
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||  || ||||||||||| | |||||||||||||||||    
T  26584080 ccaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaagggac 26584140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 28225497 - 28225437
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||  || |||||| |||||| |||||||||||||||||    
T  28225497 ccaaattgagacactttatagttaggggaccaaaatgaaattcgaaaataagttaagggac 28225437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 305
Target Start/End: Original strand, 21749249 - 21749316
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaaggga 305  Q
    ||||||| |||| |||| ||  |||| ||||| | ||||||||| |||||||||||||||||||||||    
T  21749249 ttatgggaccaaattgagacggtttaaagttaaaggatcaaaatgaaattcaaaaataagttaaggga 21749316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 14326361 - 14326279
Alignment:
Q  88 atgatcatatgttgtgagtccattgtatacttgtgtattttc-aaattaaacccttgatcaccaatctcaaatgacatgtgga 169  Q
    |||||| |||||||||||| ||||||||| |||||   |||| ||||| | || |||||||||||||| |||||||| |||||    
T  14326361 atgatcctatgttgtgagttcattgtatatttgtgcgctttctaaattcagccattgatcaccaatcttaaatgacaagtgga 14326279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 14419371 - 14419289
Alignment:
Q  88 atgatcatatgttgtgagtccattgtatacttgtgtattttc-aaattaaacccttgatcaccaatctcaaatgacatgtgga 169  Q
    |||||| |||||||||||| ||||||||| |||||   |||| ||||| | || |||||||||||||| |||||||| |||||    
T  14419371 atgatcctatgttgtgagttcattgtatatttgtgcgctttctaaattcagccattgatcaccaatcttaaatgacaagtgga 14419289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 16269499 - 16269588
Alignment:
Q  81 aatagaaatgatcatatgttgtgagtccattgtatacttgtgtattttc-aaattaaacccttgatcaccaatctcaaatgacatgtgga 169  Q
    ||||||||| ||||||||||||| || ||||||||  |||||   |||| ||||  ||||||||||||||||||| |||| ||| |||||    
T  16269499 aatagaaataatcatatgttgtgcgttcattgtatgtttgtgcgctttctaaatccaacccttgatcaccaatcttaaattacacgtgga 16269588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 18139485 - 18139590
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||| ||||||||||||||   |||||| || || || || ||| |||| |||| |||||||||||||||| ||||||| | |||    |||||||||||    
T  18139485 ctaatggagaggaccaaaacaataaacggcagaagatataagggaccaatttgagacactttatagttagaggatcaaagtgaaaacggaaaataagtta 18139584  T
Q  301 agggac 306  Q
    ||||||    
T  18139585 agggac 18139590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 33328421 - 33328388
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  33328421 gatcaaaatgaaattcaaaaataagttaagggac 33328388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 8447294 - 8447234
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||  || |||||| |||| | |||||||||||||||||    
T  8447294 ccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 8447234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 8456098 - 8456038
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||  || |||||| |||| | |||||||||||||||||    
T  8456098 ccaaattgagacactttatagttaggggaccaaaatgaaatccgaaaataagttaagggac 8456038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 17359114 - 17359050
Alignment:
Q  13 agatgaagagggaagaagataaagattgatggtgattttaaatttttatttttaggaaaatcaag 77  Q
    ||||||||||| | |||||| ||||||| | ||||| || || |||||||||||||||| |||||    
T  17359114 agatgaagaggaaggaagatgaagattgttagtgatatttaaattttatttttaggaaattcaag 17359050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 458298 - 458434
Alignment:
Q  29 agataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgtatttt 128  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||    
T  458298 agatgaagattgatggtgattttaaatttatatttttaggaaaatcaagaaaaatagaaatgattatatgttgtgagtccattgtata-------ttttt 458390  T
Q  129 caaattaaacccttgatcaccaatctcaaatgacatgtggacaa 172  Q
    |||||  | ||||||||||||||||| |||||||||||||||||    
T  458391 caaatctagcccttgatcaccaatcttaaatgacatgtggacaa 458434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 9e-30; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 6844013 - 6843923
Alignment:
Q  29 agataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatactt 119  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| ||||||| |||||    
T  6844013 agatgaagattgatggtgattttaaatttatatttttaggaaaatcaagaaaaatacaaatgattatatgttgtgagcccattgtgtactt 6843923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 45385608 - 45385705
Alignment:
Q  12 gagatgaagagggaagaagataaagattgatggtgattttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtcca 109  Q
    |||||||||||| |||||||| || |||||| |||||||| |||||||||||| || ||||| ||||||||||||||| |||||||||||| ||||||    
T  45385608 gagatgaagaggaaagaagatgaatattgatagtgatttttaatttttattttcagaaaaattaagaaaaatagaaattatcatatgttgtcagtcca 45385705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 38665709 - 38665832
Alignment:
Q  47 attttaaatttttatttttaggaaaatcaagaaaaatagaaatgatcatatgttgtgagtccattgtatacttgtgt-attttcaaattaaacccttgat 145  Q
    ||||| |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||   ||| || ||||  |||||||||  ||||  ||||    
T  38665709 atttttaatttttaattttaggaaaatcaagaaaaatagaaattatcatatgctgtgagtccagcttatcctggtgtgtttttcaaatccaacc--tgat 38665806  T
Q  146 caccaatctcaaatgacatgtggaca 171  Q
    ||||||||| |||||||| |||||||    
T  38665807 caccaatcttaaatgacacgtggaca 38665832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 19913610 - 19913505
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||   |||||  || || | ||||||| |||| ||||||||||||||||||||| || |||| | ||||||||||||||||||    
T  19913610 ctaacggagaggaccaaaatgataaaccgcagaagacttatgggaccaaattgaaacactttatagttagaggaccaaattgaaattcaaaaataagtta 19913511  T
Q  301 agggac 306  Q
    ||||||    
T  19913510 agggac 19913505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 31624023 - 31623919
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||| ||||   |||||||||||| ||||||||| |||| ||||||||||||||||||||  || |||| | |||  ||||||||||||||    
T  31624023 taacggagaggactaaaataataaacgacataagatttatgggaccaaattgaaacactttatagttaggggaccaaattgaaaaccaaaaataagttaa 31623924  T
Q  302 gggac 306  Q
    |||||    
T  31623923 gggac 31623919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 301
Target Start/End: Complemental strand, 37275005 - 37274905
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  ||||||| || || |||||||||  ||| |||| |||||||||||||||| || |||||| |||| |||||||||||||    
T  37275005 ctaacggagaggaccaaaatagtaaacggcagaagatttatgggaacaaattgagacactttatagttagaggaccaaaatgaaatccaaaaataagtta 37274906  T
Q  301 a 301  Q
    |    
T  37274905 a 37274905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 38591010 - 38591110
Alignment:
Q  206 ggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaaggga 305  Q
    ||||||||||||||  ||||||| ||||| ||||||||| |||| |||| |||||||||||||||  || |||| | ||| |||||||||||||||||||    
T  38591010 ggagaggaccaaaatagtaaacggcataagatttatgggaccaaattgagacactttatagttaggggaccaaattgaaaatcaaaaataagttaaggga 38591109  T
Q  306 c 306  Q
    |    
T  38591110 c 38591110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 41867012 - 41866907
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||| |||| ||||||||  ||||| | | ||||||||||||| |||| |||||||||||||||||||   ||||||| | ||| ||||||||||||||    
T  41867012 ctaacagagatgaccaaaatagtaaatggcgtaaaatttatgggaccaaattgaaacactttatagttaagggatcaaagtgaaaatcaaaaataagtta 41866913  T
Q  301 agggac 306  Q
    ||||||    
T  41866912 agggac 41866907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 45385792 - 45385897
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||| ||||  ||||||||||||| |||||| ||  ||| ||||||||||||||| |||   || |||||| |||| |||||||||||||    
T  45385792 ctaacggagaggactaaaatggtaaacgacataagatttataggatcaaattgaaacactttataattatgggaccaaaatgaaatccaaaaataagtta 45385891  T
Q  301 agggac 306  Q
    ||||||    
T  45385892 agggac 45385897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 14820289 - 14820206
Alignment:
Q  223 taaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||||||||||| ||||||||| | || |||| |||||||||||||||  || |||| |||||| |||||||||||||||||||    
T  14820289 taaacgacataagatttatgggactaaattgagacactttatagttaggggaccaaattaaaatccaaaaataagttaagggac 14820206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 303
Target Start/End: Original strand, 7770919 - 7770997
Alignment:
Q  225 aacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagg 303  Q
    |||| ||||| | ||||| | |||| ||||||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  7770919 aacggcataagagttatgagaccaaattgaaacactttatagttagatgatcaaaatgaaaataaaaaataagttaagg 7770997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 246 - 303
Target Start/End: Original strand, 7816131 - 7816188
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagg 303  Q
    |||| |||| |||||||||||||||||||||||||||||| | |||||||||||||||    
T  7816131 ccaaattgagacactttatagttagatgatcaaaataaaaataaaaaataagttaagg 7816188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 36756182 - 36756077
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| ||||||||  ||||||||||||| ||||||| | |||  |||||||||||||||||||   || |||| |||||   ||||||||||||    
T  36756182 ctaacggagatgaccaaaatagtaaacgacataagatttatgtgaccagattgaaacactttatagttatgggaccaaattaaaaactaaaaataagtta 36756083  T
Q  301 agggac 306  Q
    ||||||    
T  36756082 agggac 36756077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 117166 - 117062
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||   ||||||||| || |||||||||  ||| |||||||| |||||| ||||  || |||||| |||  |||||||||||||    
T  117166 ctaacggagaggaccaaaacaataaacgacagaagatttatgggatcaaattgaaacattttataattaggggaccaaaatgaaaaccaaaaataagtta 117067  T
Q  301 aggga 305  Q
    |||||    
T  117066 aggga 117062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 36940032 - 36940136
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||| ||||||||  ||||||| || || |||||||   |||| ||||||||||||||||||||  ||||||| | |||  ||||||||||||||    
T  36940032 taacggagatgaccaaaatagtaaacggcagaagatttatgataccaaattgaaacactttatagttaggggatcaaagtgaaaaccaaaaataagttaa 36940131  T
Q  302 gggac 306  Q
    |||||    
T  36940132 gggac 36940136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 306
Target Start/End: Complemental strand, 37472512 - 37472416
Alignment:
Q  210 aggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||||  |||||||||| || | ||||||| |||| |||| |||||||||||||||| || |||| |||||  |||||||||||||| ||||    
T  37472512 aggaccaaaatggtaaacgacaaaagacttatgggaccaaattgagacactttatagttagaggaccaaattaaaaaccaaaaataagttaaaggac 37472416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 24069447 - 24069549
Alignment:
Q  204 acggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagg 303  Q
    ||||| ||||||||||  ||||||| || || | ||||||| |||| |||| ||||||||||||||   ||||||||| |||  ||||||||||||||||    
T  24069447 acggaaaggaccaaaatggtaaacggcagaagagttatgggaccaaattgagacactttatagttaagggatcaaaatgaaaaccaaaaataagttaagg 24069546  T
Q  304 gac 306  Q
    |||    
T  24069547 gac 24069549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 303
Target Start/End: Original strand, 7796850 - 7796907
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagg 303  Q
    |||| |||| |||||||||| ||||||||||||||||||| | |||||||||||||||    
T  7796850 ccaaattgagacactttataattagatgatcaaaataaaaataaaaaataagttaagg 7796907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 31625383 - 31625484
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||  ||||||| || || ||||||||| |||| |||| |||||||||| ||||  || |||| | |||  ||||||||||||||    
T  31625383 taacggagaggaccaaaatagtaaacggcaaaagatttatgggaccaaattgagacactttataattaggggaccaaattgaaaaccaaaaataagttaa 31625482  T
Q  302 gg 303  Q
    ||    
T  31625483 gg 31625484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 4807483 - 4807379
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    |||||||||| |||||||   |||||| | ||| ||||||||| |||| |||||| || ||||||||||  || |||| ||||| |||||||||||||||    
T  4807483 taacggagagaaccaaaataataaacggcgtaagatttatgggaccaaattgaaaaacgttatagttaggggaccaaattaaaaatcaaaaataagttaa 4807384  T
Q  302 gggac 306  Q
     ||||    
T  4807383 aggac 4807379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 301
Target Start/End: Complemental strand, 7486195 - 7486095
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  ||||||  || || ||||||||| |||| ||||| |||||||||||||   ||||||||| |||  ||||||||| |||    
T  7486195 ctaacggagaggaccaaaatagtaaacagcaaaagatttatgggaccaaattgaagcactttatagttaagggatcaaaatgaaaaccaaaaataaatta 7486096  T
Q  301 a 301  Q
    |    
T  7486095 a 7486095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 13367048 - 13367116
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagtta 269  Q
    |||||||||||||||||||  ||||||| || || ||||||||| |||| || ||||||||||||||||    
T  13367048 ctaacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattaaaacactttatagtta 13367116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 38589917 - 38589834
Alignment:
Q  222 gtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||||||| ||||||||| |||| ||||  ||||||||||||||| || |||| | |||  |||||||||||||||||||    
T  38589917 gtaaacgacataagatttatgggaccaaattgagccactttatagttagaggaccaaattgaaa-acaaaaataagttaagggac 38589834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 16363810 - 16363915
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||||||||||||  ||||||  || |  |||||||||  ||| |||| | |||||||||||||| || |||| | |||  |||||||||||||    
T  16363810 ctaacggagaggaccaaaatagtaaacagcagacgatttatgggatcaaattgagatactttatagttagaggaccaaagtgaaaaccaaaaataagtta 16363909  T
Q  301 agggac 306  Q
    ||||||    
T  16363910 agggac 16363915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 24068448 - 24068343
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||||||||||||||||   |||||||    || | ||||||| |||| |||| |||||||||||||||  || |||||| |||  |||||||||||||    
T  24068448 ctaacggagaggaccaaattagtaaacggaggaagacttatgggaccaaattgagacactttatagttaggggaccaaaatgaaaaccaaaaataagtta 24068349  T
Q  301 agggac 306  Q
    ||||||    
T  24068348 agggac 24068343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 37276241 - 37276346
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||| ||||||||||| |   |||||| || || ||||||||| |||| |||| ||||||||||||||   ||||||| | ||| |||||||||| |||    
T  37276241 ctaacagagaggaccaatataataaacggcaaaagatttatgggaccaaattgagacactttatagttaagggatcaaagtgaaaatcaaaaataaatta 37276340  T
Q  301 agggac 306  Q
    ||||||    
T  37276341 agggac 37276346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 41867914 - 41867983
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    |||||||||||||| ||||    ||||| ||||||||||||||| |||| |||| |||||||||||||||    
T  41867914 ctaacggagaggactaaaataaaaaacggcataaaatttatgggaccaaattgagacactttatagttag 41867983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 305
Target Start/End: Original strand, 43277930 - 43278023
Alignment:
Q  212 gaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaaggga 305  Q
    ||||||||  ||||||| ||||| ||||| ||| |||| |||| ||| |||||||||||  || |||| ||||| | |||||||||||||||||    
T  43277930 gaccaaaatagtaaacggcataagatttacgggaccaaattgagacattttatagttaggggaccaaattaaaaataaaaaataagttaaggga 43278023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 3612618 - 3612686
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||| |||| |||| ||| |||| |||||   || |||||||||||||||||||||||||||||||    
T  3612618 ttatgggaccaaattgagacaatttaaagttaagagaccaaaataaaattcaaaaataagttaagggac 3612686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 10053743 - 10053847
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    |||||||||| |||||||| |  |||||||||| |  || ||| ||||||||| ||||||||||||||   || |||| | |||  ||||||||||||||    
T  10053743 taacggagagaaccaaaagaggtaacgacataagacataagggaccaacttgagacactttatagttaagggaccaaagtgaaaaccaaaaataagttaa 10053842  T
Q  302 gggac 306  Q
    |||||    
T  10053843 gggac 10053847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 36070296 - 36070192
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    ||||||| |||||||||||  ||||||| || || |||||||||  ||| |||| |||||||||||||||  || |||| | |||  ||||||||| |||    
T  36070296 ctaacggggaggaccaaaatagtaaacggcagaagatttatgggatcaaattgagacactttatagttaggggaccaaattgaaaaccaaaaataaatta 36070197  T
Q  301 aggga 305  Q
    |||||    
T  36070196 aggga 36070192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 305
Target Start/End: Complemental strand, 6843828 - 6843769
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaaggga 305  Q
    |||| |||| |||||||||||||||  || ||||||||||| | ||||||||||||||||    
T  6843828 ccaaattgagacactttatagttaggggaccaaaataaaatccgaaaataagttaaggga 6843769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 302
Target Start/End: Original strand, 29739643 - 29739742
Alignment:
Q  203 aacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaag 302  Q
    |||||| | ||||||||  |||||||  | |||||||||||| |||| |||| |||||||||||||||  ||||||| | |||  ||||||||| |||||    
T  29739643 aacggacatgaccaaaatggtaaacggaagaaaatttatgggaccaaattgagacactttatagttaggggatcaaattgaaaaccaaaaataaattaag 29739742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 1570204 - 1570309
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| ||||||||  ||||||| |||||||||||   | |||| |||| ||||||||||||||   || |||| | ||| | ||||||||||||    
T  1570204 ctaacggagatgaccaaaatagtaaacggcataaaatttaatagaccaaattgagacactttatagttatgagaccaaattgaaaatgaaaaataagtta 1570303  T
Q  301 agggac 306  Q
    | ||||    
T  1570304 aaggac 1570309  T

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Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 3237535 - 3237431
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||| | || ||||| |||||||| || || ||||||||| |||| |||| ||| |||| ||||||  || |||| | |||| |||||||||||||    
T  3237535 ctaacggaaatgatcaaaattgtaaacggcagaatatttatgggaccaaattgagacagtttaaagttaggggaccaaa-tgaaatccaaaaataagtta 3237437  T
Q  301 agggac 306  Q
    ||||||    
T  3237436 agggac 3237431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 3271944 - 3271911
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  3271944 gatcaaaatgaaattcaaaaataagttaagggac 3271911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 303
Target Start/End: Complemental strand, 4675833 - 4675768
Alignment:
Q  238 ttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagg 303  Q
    ||||||| |||| |||| ||| |||| |||||   || ||||||||||||||||||||||||||||    
T  4675833 ttatgggaccaaattgagacaatttaaagttaagggaccaaaataaaattcaaaaataagttaagg 4675768  T

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Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 4807544 - 4807511
Alignment:
Q  136 aacccttgatcaccaatctcaaatgacatgtgga 169  Q
    |||| |||||||||||||||||||||||||||||    
T  4807544 aaccgttgatcaccaatctcaaatgacatgtgga 4807511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Original strand, 30864525 - 30864558
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  30864525 gatcaaaatgaaattcaaaaataagttaagggac 30864558  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 27750619 - 27750719
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| ||||||||  |||||| | |||| ||||||||| |||| |||| | |||||||| |||   ||||||| | |||  |||||||||||||    
T  27750619 ctaacggagaagaccaaaatagtaaacaatataagatttatgggaccaaattgagatactttataattaacggatcaaattgaaaaccaaaaataagtta 27750718  T
Q  301 a 301  Q
    |    
T  27750719 a 27750719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 39515272 - 39515212
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||| ||  ||||||||| |||  |||||||||||||||||||    
T  39515272 ccaaattgagacactttatagtcaggggatcaaaatgaaaaccaaaaataagttaagggac 39515212  T

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Target: scaffold0003 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 48455 - 48559
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||| ||||||||| ||||||| || || |||||||||  ||| |||| |||||||||||||| | || |||||| |||| ||||||||||||||    
T  48455 taacggagatgaccaaaagagtaaacggcagaatatttatgggatcaaattgagacactttatagttaaaggaccaaaatgaaatccaaaaataagttaa 48554  T
Q  302 gggac 306  Q
    |||||    
T  48555 gggac 48559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 47187 - 47083
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||||||||||||  |||||||  | || ||||||||| |||| |||| ||| |||| |||||   ||||||||| |||||||||||||||||||    
T  47187 taacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacaatttaaagttaagggatcaaaatgaaattcaaaaataagttaa 47088  T
Q  302 gggac 306  Q
    |||||    
T  47087 gggac 47083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 22244 - 22142
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaa 301  Q
    ||||||||| ||||||||  |||||||||| || ||||||| |  ||| |||| ||| |||||||||||| ||||||| | ||| ||||||||||| |||    
T  22244 taacggagatgaccaaaatagtaaacgacagaagatttatgtgaacaaattgagacattttatagttaga-gatcaaagtgaaaatcaaaaataaggtaa 22146  T
Q  302 ggga 305  Q
    ||||    
T  22145 ggga 22142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 513 - 582
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    |||||||||||||||||||  ||||||| ||||| |||||||   |||| |||| |||||||||||||||    
T  513 ctaacggagaggaccaaaatagtaaacggcataagatttatgacaccaaattgagacactttatagttag 582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 2263 - 2368
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||| ||||||||||  ||||||   | || | ||||||| |||| ||||||||||||||| ||||  || |||||| |||  |||||||||||||    
T  2263 ctaacggaaaggaccaaaatagtaaacagtagaagagttatgggaccaaattgaaacactttataattaggggaccaaaatgaaaaccaaaaataagtta 2362  T
Q  301 agggac 306  Q
    ||||||    
T  2363 agggac 2368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 5242 - 5182
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||  || ||||| ||||| |||||||||||||||||||    
T  5242 ccaaattgagacactttatagttaggggaccaaaagaaaatccaaaaataagttaagggac 5182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 25995 - 25935
Alignment:
Q  246 ccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagttaagggac 306  Q
    |||| |||| |||||||||||||||  || |||||| |||||| |||||||||||||||||    
T  25995 ccaaattgagacactttatagttaggggaccaaaatgaaattcgaaaataagttaagggac 25935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 152
Target Start/End: Complemental strand, 242752 - 242606
Alignment:
Q  12 gagatgaagagggaagaagataaagattgatggtgattttaaatttt---tatttttaggaaaatcaagaaa-aatagaaatgatcatatgttgtgagtc 107  Q
    ||||||||||||||| ||||| ||||||| |||||||||| ||||||    | ||  ||  ||||   |||| | || ||||||||||||||||||||||    
T  242752 gagatgaagagggaaaaagatgaagattgttggtgatttttaattttagaaaattcaagacaaatagggaaagattataaatgatcatatgttgtgagtc 242653  T
Q  108 cattgtata-cttgtgt-attttcaaattaaacccttgatcaccaat 152  Q
    ||||||| |  ||||||  ||||||||| ||||||||||||||||||    
T  242652 cattgtaaattttgtgtgcttttcaaatcaaacccttgatcaccaat 242606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 626 - 695
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    |||||||||| ||||||||  ||||||| || || ||||||||| | || |||| |||||||||||||||    
T  626 ctaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttag 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 648 - 579
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    |||||||||| ||||||||  ||||||| || || ||||||||| | || |||| |||||||||||||||    
T  648 ctaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttag 579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 71 - 38
Alignment:
Q  273 gatcaaaataaaattcaaaaataagttaagggac 306  Q
    ||||||||| ||||||||||||||||||||||||    
T  71 gatcaaaatgaaattcaaaaataagttaagggac 38  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 8497 - 8392
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttagatgatcaaaataaaattcaaaaataagtta 300  Q
    |||||||||| |||| |||  ||||| |||  || ||||||||| |||| |||| ||| |||||||||||  || |||| | |||  |||||||||||||    
T  8497 ctaacggagatgaccgaaatagtaaatgactgaagatttatgggaccaatttgagacagtttatagttaggggagcaaagtgaaaaccaaaaataagtta 8398  T
Q  301 agggac 306  Q
    ||||||    
T  8397 agggac 8392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 9476 - 9545
Alignment:
Q  201 ctaacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    |||||||||| ||||||||  ||||||| || || ||||||||| | || |||| |||||||||||||||    
T  9476 ctaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagttag 9545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 77180 - 77248
Alignment:
Q  202 taacggagaggaccaaaagtgtaaacgacataaaatttatgggtccaacttgaaacactttatagttag 270  Q
    ||||||||| ||||||||  |||||||  | || ||||||||| |||| ||||||| ||||||||||||    
T  77180 taacggagaagaccaaaacagtaaacggtagaatatttatgggaccaaattgaaacgctttatagttag 77248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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