View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7763_high_11 (Length: 332)
Name: NF7763_high_11
Description: NF7763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7763_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 25841946 - 25842265
Alignment:
| Q |
1 |
actaaggcaaagattgagcatgaagatggtcgcaatatgttcttcgtaacttttttaaccgatgaggatgtcccaaatatccctgagaaggttcaaaaag |
100 |
Q |
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| T |
25841946 |
actaaggcaaagattgagcatgaaggtggtcgaaatatgttcttcgtaacttttttaaccgatgaggatgtcccaaatatccctgagaaggttcaaaaag |
25842045 |
T |
|
| Q |
101 |
agacagtgtacataagctctgatgatgaggccaatgtgacatatgaggatgatgtggatcacaaccaacttgaacacattcaagatttaaaccaaatgca |
200 |
Q |
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| T |
25842046 |
agacagtgtacataagctctgatgatgaggccaatgtaacatatgaggatgatgtggatcacaaccagcttgaacacattcaagatttaaaccaaatgca |
25842145 |
T |
|
| Q |
201 |
ggaagttaatgaggtcgaacaagtaccagaattgcaacatgtgcaggaggttcagcaagtggaagttgttcaagaattggaacaagagcatgaggttgaa |
300 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25842146 |
ggaagttaatgaggtcgaacaagtgccagaattgcaacatgtgcaggaggttcagcaagtggaagttgttcaagaattggaacaagagcatgaggttgaa |
25842245 |
T |
|
| Q |
301 |
gaaatgaatgaatatgatgt |
320 |
Q |
| |
|
|||||||||||||||||||| |
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| T |
25842246 |
gaaatgaatgaatatgatgt |
25842265 |
T |
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