View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7765_high_3 (Length: 630)
Name: NF7765_high_3
Description: NF7765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7765_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 598; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 598; E-Value: 0
Query Start/End: Original strand, 6 - 615
Target Start/End: Original strand, 37337357 - 37337966
Alignment:
| Q |
6 |
agtagcagagaaagccaaaaattaaggatcaagatttatggtttacacatacatattttgtttcacattgaagaaagaggatgaaagaagaccatagtcc |
105 |
Q |
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| T |
37337357 |
agtagcacagaaagccaaaaattaaggatcaagatttatggtttacacatacatattttgtttcacattgaagaaagaggatgaaagaagaccatagtcc |
37337456 |
T |
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| Q |
106 |
agcaacaaaagtggaaagttaccaaatagatttggtagctccaaatcattcttcattgattcagcagctcttaatgattcataatcacacattcatgttc |
205 |
Q |
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| T |
37337457 |
agcaacaaaagtggaaagttaccaaatagatttggtagctccaaatcattcttcattgattcagcagctcttaatgattcataatcacacattcatgttc |
37337556 |
T |
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| Q |
206 |
ctcttgcattcttaagtttgttctgtatcagatagaagttggcagggcaaaagtggacaaaagcatattgaaaaatatttttcgataataaaagaaagct |
305 |
Q |
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| T |
37337557 |
ctcttgcattcttaagtttgttctgtatcagatagaagttggcagggcaaaagtggacaaaagcatattgaaaaatatttttcgatagtaaaagaaagct |
37337656 |
T |
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| Q |
306 |
gaagttaaaagagtaacatacgtgtgtaaataatgaatgattagggaaaatttcattagaggcttgaagttctggtactgtagatagagacagaaacatc |
405 |
Q |
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| T |
37337657 |
gaagttaaaagagtaacatacgtgtgtaaataatgaatgattagggaaaatttcattagaggcttgaagttctggtactgtagatagagacagaaacatc |
37337756 |
T |
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| Q |
406 |
agcattcaccaaaaataatcctaatataggtcagacaagttggaatttactacagtatagtccaacaaatacacattctttctattctaattcaaatctg |
505 |
Q |
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| T |
37337757 |
agcattcaccaaaaataatcctaatataggtcagacaagttggaatttactacagtatagtccaacaaatacgcattctttctattctaattcaaatctg |
37337856 |
T |
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| Q |
506 |
tggatcttctgccagcaacacagttttcccagaatctaataaatttgaattttgaaacctaacaaagctaccctgtagatcttgcatttttgtaattcta |
605 |
Q |
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| T |
37337857 |
tggatcttctgccagcaacacagttttcccagaatctaataaatttgaattttgaaacctaacaaagctaccctgtagatcttgcatttttgtaattcta |
37337956 |
T |
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| Q |
606 |
tgttgaatct |
615 |
Q |
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| T |
37337957 |
tgttgaatct |
37337966 |
T |
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